EBI Dbfetch

ID   AF035935; SV 1; linear; genomic DNA; STD; PRO; 1260 BP.
XX
AC   AF035935;
XX
DT   03-FEB-1998 (Rel. 54, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 3)
XX
DE   Pyrococcus horikoshii glutamate dehydrogenase (gdhA) gene, partial cds.
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KW   .
XX
OS   Pyrococcus horikoshii
OC   Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae;
OC   Pyrococcus.
XX
RN   [1]
RP   1-1260
RX   DOI; 10.1007/s007920050051
RX   PUBMED; 9672687.
RA   Gonzalez J.M., Masuchi Y., Robb F.T., Ammerman J.W., Maeder D.L.,
RA   Yanagibayashi M., Tamaoka J., Kato C.;
RT   "Pyrococcus horikoshii sp. nov., a hyperthermophilic archaeon isolated from
RT   a hydrothermal vent at the Okinawa Trough";
RL   Extremophiles 2(2):123-130(1998).
XX
RN   [2]
RP   1-1260
RA   Gonzalez J.M., Robb F.T., Kato C.;
RT   ;
RL   Submitted (26-NOV-1997) to the EMBL/GenBank/DDBJ databases.
RL   Center of Marine Biotechnology, University of Maryland Biotechnology
RL   Institute, 701 E. Pratt Street, Baltimore, MD 21202, USA
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FH   Key             Location/Qualifiers
FH
FT   source          1..1260
FT                   /organism="Pyrococcus horikoshii"
FT                   /strain="JA1"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:53953"
FT   gene            complement(<1..1260)
FT                   /gene="gdhA"
FT   CDS             complement(<1..1260)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="gdhA"
FT                   /product="glutamate dehydrogenase"
FT                   /db_xref="GOA:O52310"
FT                   /db_xref="HSSP:1GTM"
FT                   /db_xref="InterPro:IPR006097"
FT                   /db_xref="UniProtKB/Swiss-Prot:O52310"
FT                   /protein_id="AAB99956.1"
FT                   /translation="MVEQDPFEIAVKQLERAAQHMKISEEALEFLKRPQRIVEVTIPVE
FT                   MDDGSVKVFTGFRVQYNWARGPTKGGIRWHPEETLSTVKALAAWMTWKTAVMDLPYGGG
FT                   KGGIIVDPKKLSDREKERLARGYIRAVYDIISPYEDIPAPDVYTNPQIMAWMMDEYETI
FT                   ARRKTPAFGIITGKPLSIGGSLGRNEATARGASYTIREAAKVLGWDGLKGKTIAIQGYG
FT                   NAGYYLAKIMSEDYGMKVVAVSDSKGGIYNPDGLNADEVLKWKREHGSVKDFPGATNIS
FT                   NEELLELDVDVLAPAAIEEVITKKNADNIKAKIVAEVANGPVTPEADEILFEKGILQIP
FT                   DFLCNAGGVTVSYFEWVQNITGYYWTLEEVRERLDKKMTKAFYDVYNTAKEKNIHMRDA
FT                   AYVVAVQRVYQAMLDRGWVKH"
XX
SQ   Sequence 1260 BP; 266 A; 352 C; 252 G; 390 T; 0 other;
     gtgcttgacc catccgcgat cgagcattgc ctggtagacc ctctggactg caactacata        60
     agctgcatct ctcatgtgta tgttcttctc ctttgcggtg ttgtagacgt catagaatgc       120
     tttcgtcatc ttcttgtcaa gtctctctct aacctcttca agtgtccagt agtaaccggt       180
     tatgttctgc acccactcga agtagctgac cgtaactcca ccagcgttac ataggaagtc       240
     cggaatctga aggattcctt tctcgaatag tatctcatcg gcctctgggg taaccggacc       300
     gttggctacc tctgcaacaa tcttagcctt aatgttgtct gcgttcttct tggttatgac       360
     ttcttctata gccgccggag ctaggacatc aacgtcaagc tcaagtagtt cttcattgct       420
     tatgttcgta gctcctggga agtccttaac gcttccatgc tccctcttcc acttgagaac       480
     ctcatcagcg ttaaggccat ctgggttgta aattccaccc ttgctgtcgc ttacggctac       540
     gactttcatt ccgtaatctt cgctcattat ctttgctagg tagtaacctg cgttaccata       600
     accctgaatt gcgattgtct tacccttgag tccgtcccat ccaagaacct tagctgcttc       660
     cctaattgtg tagcttgctc ctcttgcggt agcctcattc cttccaaggg atccaccgat       720
     gctgaggggc ttcccggtta ttataccaaa ggctggtgtc ttcctcctgg caatcgtctc       780
     gtattcatcc atcatccaag ccattatctg tgggttggtg taaacatcgg gagcaggtat       840
     gtcctcgtat gggcttatta tatcgtaaac ggccctaatg tagccccttg caagtctctc       900
     cttctctcta tcggagagct tctttggatc aactataatt ccacccttac ctccaccgta       960
     tgggagatcc attacagcag tcttccaggt catccaagct gcaagggcct taacagtact      1020
     tagagtctct tcgggatgcc acctaattcc acctttagtt ggacccctag cccagttgta      1080
     ttggactcta aatcctgtga aaacttttac agagccatca tccatttcaa cggggattgt      1140
     gacctcaaca atcctctgag gcctcttcaa gaactcgaga gcttcttcac ttatcttcat      1200
     gtgttgggca gctctctcaa gctgcttaac tgcaatttca aaggggtcct gctcaaccat      1260
//