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EBI DbfetchID AF034104; SV 1; linear; genomic DNA; STD; PRO; 3083 BP. XX AC AF034104; XX DT 25-NOV-1997 (Rel. 53, Created) DT 15-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Chromatium vinosum pet operon Fe-S protein (petA), cytochrome b (petB), and DE cytochrome c1 (petC) genes, complete cds. XX KW . XX OS Allochromatium vinosum OC Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; OC Allochromatium. XX RN [1] RP 1-3083 RA Chen Y.L., Dincturk H.B., Qin H., Knaff D.B.; RT "The pet operon, encoding the prosthetic group containing a subunit of the RT bc1 complex of the purple sulfur bacterium Chromatium vinosum"; RL Photosyn. Res. 57:149-158(1998). XX RN [2] RP 1-3083 RA Chen Y.L., Dincturk H.B., Qin H., Knaff D.B.; RT ; RL Submitted (11-NOV-1997) to the EMBL/GenBank/DDBJ databases. RL Department of Chemistry and Biochemistry, Texas Tech University, Lubbock, RL Texas 79409, USA XX FH Key Location/Qualifiers FH FT source 1..3083 FT /organism="Allochromatium vinosum" FT /strain="Strain D" FT /mol_type="genomic DNA" FT /db_xref="taxon:1049" FT CDS 341..964 FT /codon_start=1 FT /transl_table=11 FT /gene="petA" FT /product="Fe-S protein" FT /note="Rieske protein" FT /db_xref="GOA:O31214" FT /db_xref="InterPro:IPR005805" FT /db_xref="InterPro:IPR006317" FT /db_xref="InterPro:IPR014349" FT /db_xref="InterPro:IPR017941" FT /db_xref="InterPro:IPR019470" FT /db_xref="UniProtKB/Swiss-Prot:O31214" FT /protein_id="AAB86973.1" FT /translation="MLASAGGYWPMSAQGVNKMRRRVLVAATSVVGAVGAGYALVPFVA FT SMNPSARARAAGAPVEADISKLEPGALLRVKWRGMPVWVVHRSSEMLAALSSNDPKLVD FT PTSEVPQQPDYCKNPTRSIKPEYLVAIGICTHLGCSPTYRPEFGPDDLGSGWKGGFHCP FT CHGSRFDLAARVFKNVPAPTNLVIPKHVYLNDTTILIGEDRGSA" FT CDS 964..2199 FT /codon_start=1 FT /transl_table=11 FT /gene="petB" FT /product="cytochrome b" FT /db_xref="GOA:O31215" FT /db_xref="InterPro:IPR005797" FT /db_xref="InterPro:IPR005798" FT /db_xref="InterPro:IPR016174" FT /db_xref="InterPro:IPR016175" FT /db_xref="UniProtKB/Swiss-Prot:O31215" FT /protein_id="AAB86974.1" FT /translation="MSAEKTENLSWIDKRFPLSETWRNHLSEYYAPKNLNFWSFFGSLA FT ILTLVIQIVTGVWLAMSYKPDAGLAFASVEYIMRDVDWGWLIRYMHSTGASMFFIVIYL FT HMFRGLLRGSYRKPRELLWMIGVVIYLVMMATAFFGYLLPWGQMSYWGAQVIVNLFAAV FT PVVGEDLSVWVRGDFVISDATLNRFFAFHFLLPFLLAGLVFLHIVALHHVGSNNPDGIE FT IKEGPKGNRWSDKAPADGIPFHPYYTVKDLMGVVVFLAIFGYVMFFNPTMGGLFLEAPN FT FQPANPMQTPAHIAPVWYFTPFYAMLRAVPPMYGSQFPGVVVMFAAILILFVLPWLDRS FT PVKSMRYKGPIFKWATGIFVVSFVALAWLGIQPASDFYTLLSQIFTVLYFAYFLLMPIY FT SSLDKTKPFLRG" FT CDS 2204..2938 FT /codon_start=1 FT /transl_table=11 FT /gene="petC" FT /product="cytochrome c1" FT /db_xref="GOA:O31216" FT /db_xref="InterPro:IPR002326" FT /db_xref="InterPro:IPR009056" FT /db_xref="UniProtKB/Swiss-Prot:O31216" FT /protein_id="AAB86975.1" FT /translation="MRKLILATFLLLAPTALLASGGGEHLESANIDLRDQASLQRGAKY FT FMNYCTGCHSLQYMRYNRLAKDLGIDEIALRQNLLFGDAKPGDLITKAMTDDDALKWFG FT VVPPDLTLVTRWRSPDWVYTYLKSFYLDDTRPYGVNNVLFPLVGMPHVLGDLQGRQEAV FT MEPSHEPGGEPTIKGVKLVEEGGLSPQEYDTMVRDITNFLTYAGEPFQLERERIGRYVL FT LFLGFLFILAYLLKKEYWKDVH" XX SQ Sequence 3083 BP; 518 A; 969 C; 911 G; 685 T; 0 other; tttccacgca gaagacaacg catcaggcgc gtgaactggg gctttgttat ctggccgctg 60 gccatcatgc caccgaacgc tatggcgttc aggcacttgg caagcatctg gccgaacgct 120 ttgggctgtg gcatcgattc gtcgagatcg acaatccagc gtgacgggcg tccggcgcgg 180 cgctgttggg ggtggtcgta ttcgcaccgt ccttgaccaa tcccgctgag atcacggaga 240 atgcgcggtc gattttgcat cgatcgtcct attctcaaaa ttttccacct gaagtttcat 300 ccaagctgcg tggggcttcg cctggggctt gccgtgggcg atgcttgcat cagccggggg 360 atattggcct atgagcgcgc aaggcgtgaa caaaatgagg cgacgagtgc tcgttgccgc 420 gaccagcgtg gtcggtgccg ttggtgccgg ctacgcgctc gtcccgttcg tcgcatcgat 480 gaatccgagt gcccgtgctc gggcggccgg tgcaccagtc gaggcggaca tcagcaaact 540 ggagccgggc gccctcctgc gcgtcaagtg gcgcggtatg ccggtatggg tggtgcatcg 600 ctcgtccgag atgctggcag cgctgtccag taatgatccc aagctggtcg accccacttc 660 cgaagtgccc cagcagccgg actactgcaa gaacccgacg cgctcgatca agcccgagta 720 tctggtcgcc atcggtatct gcacccatct gggttgctcg ccgacctatc gccccgagtt 780 cggacccgat gacctgggtt ccggctggaa gggcggcttc cactgtccct gtcacggctc 840 gcggttcgac ctggcggcgc gcgtgttcaa gaacgtcccg gcgcccacca atctggtgat 900 cccgaagcac gtttatctca acgacaccac catcctcatt ggtgaggatc gagggagcgc 960 ctgatgagtg ccgaaaagac cgaaaacctc agttggatcg acaagcgatt cccgctgtcg 1020 gagacctggc gtaaccatct ctccgaatac tatgctccga agaacttgaa cttctggtcg 1080 ttcttcggct cgctggccat cctgacgctg gtcatccaga tcgtcacggg cgtgtggctg 1140 gccatgagct acaagccgga tgccggtctg gccttcgcct cggtcgagta catcatgcgt 1200 gatgtcgact ggggctggct gatccgctac atgcattcga ccggcgcctc gatgttcttc 1260 atcgtcatct atctgcacat gttccgcggg ctgctgaggg gttcctaccg caagccgcgc 1320 gagttgctgt ggatgatcgg tgtcgtcatc tatctggtga tgatggccac cgccttcttc 1380 ggttatctgc tgccctgggg gcagatgtcc tattggggcg cgcaggtcat tgtcaacctg 1440 ttcgcggcgg ttccggtcgt cggtgaggat ctctcggtct gggtgcgtgg cgacttcgtc 1500 atctccgacg cgaccctcaa ccgcttcttc gccttccact tcctgctgcc tttcctgctc 1560 gccgggctgg tgttcctgca catcgtcgct ctgcatcacg tcggttccaa caaccccgac 1620 ggcatcgaga tcaaggaagg ccccaagggc aaccgctgga gcgacaaggc tccggctgac 1680 ggcatcccct tccatcccta ttacaccgtc aaggatctga tgggtgtggt ggtgttcctg 1740 gccatcttcg gctacgtcat gttcttcaac ccgaccatgg gcgggttgtt cctggaggcg 1800 ccgaacttcc agccggccaa cccgatgcag acccccgcgc acatcgcgcc ggtctggtac 1860 ttcacgccct tctacgccat gctgcgcgcg gtgccgccca tgtatggctc gcagttcccc 1920 ggcgtggtgg tgatgttcgc ggccatcctg atcctgttcg tgctgccctg gctcgaccgt 1980 agcccggtga agtcgatgcg ctacaaggga ccgatcttca agtgggcgac cggcatcttc 2040 gtcgtctcct tcgtggcctt ggcctggttg ggcatccagc cggcgtccga tttctacact 2100 ctgctgtcgc agatctttac cgtgctgtat ttcgcctact tcctgctgat gccgatctac 2160 agctcgctgg acaagaccaa gccgttcctg agagggtgac atcatgagaa agctgatcct 2220 ggccaccttc ttgctcctgg cgcctacggc cctgctggcc tccggcgggg gcgagcactt 2280 ggaatccgcc aacatcgatc tgcgcgatca ggcctccttg cagcgcggcg ccaagtactt 2340 catgaattac tgcacgggtt gtcactcgct gcagtacatg cgctacaacc gtctcgccaa 2400 ggatcttggc atcgacgaga tcgcactgcg tcagaacctg ctcttcggcg acgccaagcc 2460 gggcgacctc atcaccaagg ccatgaccga cgatgatgcg ctcaagtggt tcggcgtggt 2520 tccgccggat ctgacgctgg tgacgcgctg gcgctcgccg gattgggtct acacttatct 2580 caagagcttc tatctggacg acacgcgccc ctatggcgtc aacaacgtgc tcttcccgct 2640 ggtcggtatg ccgcacgtcc tgggtgatct ccagggacgt caggaggccg tcatggagcc 2700 gtcgcacgag ccaggcggcg agccgaccat caagggtgtg aagctggtcg aggaaggcgg 2760 actgtcgccg caggaatacg acaccatggt gcgggacatc accaacttcc tgacctatgc 2820 gggtgaaccc ttccagctcg aacgtgagcg catcggtcgt tatgtgctcc tgttcctggg 2880 cttcctgttc atcctggcct atctcctcaa gaaggagtac tggaaggacg tccactgatc 2940 ggacgccacg gcggcggtct aggactagac cgccgctttc gttcccgcct tgtcaatcgg 3000 tactgcaatg accctctatt ccgatcctac ctgtccctat tgtcatcggg tcagaatggt 3060 cctggccgag aaaggaatcg cgg 3083 // |
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