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EBI Dbfetch

ID   AF031369; SV 1; linear; genomic DNA; STD; PRO; 1554 BP.
XX
AC   AF031369;
XX
DT   01-JUL-1998 (Rel. 56, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 2)
XX
DE   Lactobacillus sp. 'OND 32' alpha-amylase (amyA) gene, partial cds.
XX
KW   .
XX
OS   Lactobacillus manihotivorans
OC   Bacteria; Firmicutes; Lactobacillales; Lactobacillaceae; Lactobacillus.
OG   Plasmid unnamed
XX
RN   [1]
RP   1-1554
RA   Morlon-Guyot J., Jacobe de Haut I., Boniface J., Raimbault M., Guyot J.P.;
RT   "Detection of conserved alpha-amylase genes in lactobacilli. Evidence for
RT   plasmid-associated amylase activity in two new Lactobacillus sp. strains
RT   LMG 18010 and LMG 18011";
RL   Unpublished.
XX
RN   [2]
RP   1-1554
RA   Morlon-Guyot J., Jacobe de Haut I., Boniface J., Raimbault M., Guyot J.P.;
RT   ;
RL   Submitted (24-OCT-1997) to the EMBL/GenBank/DDBJ databases.
RL   Biotechnology, ORSTOM-Montpellier, 911, Avenue Agropolis; BP 5054,
RL   Montpellier 34032, France
XX
DR   CABRI; LMG 18010.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1554
FT                   /organism="Lactobacillus manihotivorans"
FT                   /plasmid="unnamed"
FT                   /strain="OND 32; LMG 18010"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:88233"
FT   CDS             117..>1554
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="amyA"
FT                   /product="alpha-amylase"
FT                   /note="method: conceptual translation supplied by author"
FT                   /db_xref="GOA:O85007"
FT                   /db_xref="HSSP:1BAG"
FT                   /db_xref="InterPro:IPR013781"
FT                   /db_xref="UniProtKB/TrEMBL:O85007"
FT                   /protein_id="AAC24760.1"
FT                   /translation="MKKKKSFWLVSFLVIVASVFFISFGLSNHSKQVVQADSDTTSTDD
FT                   SSNDTADSVSDGVILHAWCWSFNTIKNNLKQIHDAGYTTVQTSPVNEVKVGNSASKSLN
FT                   NWYWLYQPTKYSIGNYYLGTEAEFKSMCAAAKEYNIRIIVEATLNDTTSDYRQFSVEIK
FT                   SISNWTHGNTQISNWSIREDVTQNSLLGLYGLNAQNSQVQTYLKNYLERLISDGASGFR
FT                   YDAAKHIELPSQYDGSYGSNFWPNITDNGSEFQYGEVLQDSISKESDYANYMSVTASNY
FT                   GNTIRNALKNRDFTASTLQNFNISVPASKLVTWVESHDNYANDDQVSTRMNSSDIKLGW
FT                   AVVASRSGSVPLFFDRPVDGGNGTRFPGSSEIGDAGSSLYYDKAVVAVNKFHNAMAGQS
FT                   EYISNPNGNTKIFENERGSKGVVFANASDSSYSLNVKTSLADGTYENKAGSDEFTVKNG
FT                   YLTGTIQGREVVVLYGDPTSS"
XX
SQ   Sequence 1554 BP; 485 A; 238 C; 333 G; 498 T; 0 other;
     tttcgatttt tatgaaaacg gtcgtaaaga agctagcaaa aatatataat ttcttttgaa        60
     agtgttcact aggccaagct gcagtttcaa tattttaata aagggggcag taaaaagtga       120
     aaaaaaagaa aagtttctgg cttgtttctt ttttagttat agtagctagt gttttcttta       180
     tatcttttgg attgagcaat cattctaaac aagttgttca agcggatagt gatacgacat       240
     caactgatga ctcaagcaat gatacagctg attctgttag cgacggtgtt attttgcatg       300
     catggtgctg gtcgttcaac acgattaaaa acaacttgaa acagattcat gacgccggct       360
     acacaacggt tcaaacttca cctgttaatg aagttaaagt tggaaatagc gcgtctaagt       420
     cattaaacaa ctggtattgg ctatatcagc caactaaata tagtattggt aactattatt       480
     taggaacgga agctgaattt aagtcaatgt gcgctgctgc taaagaatat aatatcagga       540
     tcattgtcga agcaactctg aatgatacaa caagtgatta taggcaattt tcggttgaaa       600
     ttaaaagtat ttcaaattgg acacatggta acacacaaat ttcgaattgg agtattcggg       660
     aagatgtaac tcaaaattcg ttgttaggtt tatatggatt gaatgctcaa aattctcaag       720
     ttcagacgta tttgaagaat tatttggaac gcttgatttc tgacggagct tcaggctttc       780
     gttatgatgc agctaagcat attgaacttc caagtcaata tgatggcagc tatggcagca       840
     atttctggcc aaatattact gataatgggt ctgaatttca gtatggtgaa gttttgcagg       900
     actcgatttc aaaagaatca gattatgcta attacatgag tgttacagct tcaaattacg       960
     gcaatacgat tcgcaatgcg ttaaagaatc gtgattttac cgcaagtact ttgcagaatt      1020
     tcaacatcag tgttccagct tctaaattag taacttgggt cgaatcgcat gataattatg      1080
     ctaacgatga tcaagtttcg actaggatga atagtagtga tattaaatta ggctgggctg      1140
     ttgttgcttc gcgttctggt agtgttccgc tgttctttga ccgtccagtt gatggtggta      1200
     atggtactcg gttccctggc agttcagaaa ttggtgatgc tggcagcagt ttgtattatg      1260
     ataaagcagt tgtagctgtt aataaattcc ataatgcaat ggctggtcaa tctgaatata      1320
     tttctaatcc aaatggcaat accaagattt ttgaaaatga acgtggcagc aaaggggttg      1380
     tttttgcaaa cgcttccgac agttcatata gtttgaatgt taaaactagt ttagctgatg      1440
     ggacttatga aaacaaggct ggttcagatg aatttaccgt taaaaatggt tatttaaccg      1500
     gtacaattca aggacgtgaa gttgttgttc tttacgggga tccaacaagc agca            1554
//


  
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