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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AF030292; SV 1; linear; mRNA; STD; PLN; 1524 BP.
XX
AC   AF030292;
XX
DT   30-SEP-1998 (Rel. 57, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 2)
XX
DE   Lycopersicon esculentum ornithine decarboxylase mRNA, complete cds.
XX
KW   .
XX
OS   Solanum lycopersicum
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons;
OC   asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum;
OC   Lycopersicon.
XX
RN   [1]
RP   1-1524
RX   DOI; 10.1104/pp.118.1.323
RX   PUBMED; 9733552.
RA   Alabadi D., Carbonell J.;
RT   "Expression of ornithine decarboxylase is transiently increased by
RT   pollination, 2,4-dichlorophenoxyacetic acid, and gibberellic acid in tomato
RT   ovaries";
RL   Plant Physiol. 118(1):323-328(1998).
XX
RN   [2]
RP   1-1524
RA   Alabadi D., Carbonell J.;
RT   ;
RL   Submitted (17-OCT-1997) to the EMBL/GenBank/DDBJ databases.
RL   IBMCP (UPVA-CSIC), Camino de Vera, 14, Valencia 46022, Spain
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1524
FT                   /organism="Solanum lycopersicum"
FT                   /cultivar="Rutgers"
FT                   /mol_type="mRNA"
FT                   /tissue_type="ovary"
FT                   /db_xref="taxon:4081"
FT   CDS             40..1335
FT                   /codon_start=1
FT                   /product="ornithine decarboxylase"
FT                   /EC_number="4.1.1.17"
FT                   /db_xref="GOA:O22616"
FT                   /db_xref="InterPro:IPR000183"
FT                   /db_xref="InterPro:IPR002433"
FT                   /db_xref="InterPro:IPR009006"
FT                   /db_xref="UniProtKB/Swiss-Prot:O22616"
FT                   /protein_id="AAC61845.1"
FT                   /translation="MAGQTVIVSGLNPAAILQSTIGGAPVAAAAENGHTRKVVPLSKDA
FT                   LQDFMVSIITQKLQDDKQPFYVLDLGEVVSLMEQWNSALPNIRPFYAVKCNPEPSFLSM
FT                   LSAMGSNFDCASRAEIEYVLSHGISPDRIVFANPCKPESDIIFAEKIGVNLTTYDSEDE
FT                   VYKIRKHHPKCELLLRIKPMTDGNARCPMGPKYGALPEEIEPLLRTAQAARLTVSGVSF
FT                   HIGSGDADSNAYLGAIAAAKQVFETAAQLGMPKMTVLDIGGGFTSGHQFTTAAPAVKSA
FT                   LETHFHDFPELTIIAEPGRFFAETAFTLATTIIGKRVRGELKEYWINDGLYGSMNCVLY
FT                   DHATVTATPLACMSNRNNLNCGGSKTFPSTVFGPTCDALDTVLRDYQLPELQVNDWLIF
FT                   PNMGAYTKAAGSNFNGFNTSAIVTHLAYAYPN"
XX
SQ   Sequence 1524 BP; 389 A; 364 C; 320 G; 451 T; 0 other;
     gaaattcata tatttttcgg tattccttct tctctttgaa tggccggcca aacagtcatt        60
     gtttccggtt tgaatccggc ggccattctt cagtccacaa tcggtggagc tccggtggca       120
     gcggcggcgg agaacggcca tacgagaaaa gttgttcctc tgtcaaaaga tgcccttcag       180
     gatttcatgg tttcaatcat aacacagaaa ttacaggacg ataaacaacc cttttatgtt       240
     ctagatttgg gtgaagttgt ttcccttatg gaacaatgga actctgcttt accaaatatc       300
     cgtccgtttt atgctgttaa atgtaaccct gaaccttcat ttctctccat gttgtctgct       360
     atgggttcca attttgattg tgctagccgt gctgaaattg agtatgtttt gtctcatggt       420
     atctcgccgg accggattgt tttcgctaac ccttgtaagc cggaatccga tattatcttc       480
     gccgagaaaa ttggggttaa tctcactact tacgattccg aggatgaagt ttacaagatc       540
     cgtaaacatc acccaaaatg cgagcttttg cttcgaatca aacccatgac cgacggcaac       600
     gcgagatgcc caatgggtcc aaaatacggc gcattaccgg aggaaatcga gccgctcctc       660
     cgtacagctc aagccgctag actcaccgtc tccggcgtgt ccttccatat cggcagcgga       720
     gacgccgatt ccaacgctta tctaggagcc atagccgcag cgaaacaggt tttcgaaaca       780
     gcagctcaac tcggaatgcc aaaaatgacg gtactcgaca tcggcggcgg atttacctcc       840
     ggccaccaat tcaccaccgc tgctcccgcc gttaaatcag ctctggaaac ccacttccac       900
     gacttccctg agctaaccat catcgctgaa ccaggtcgtt tcttcgccga aacagcgttc       960
     actttagcaa caaccatcat cggcaaaaga gtcagaggtg aattaaaaga atactggatc      1020
     aacgatgggt tatacggatc gatgaactgt gtactttacg accatgcgac ggtgacggcg      1080
     acgccattag cgtgcatgtc gaatcgtaat aacctcaact gcggcgggtc gaaaacgttt      1140
     ccgtcgactg tattcgggcc cacctgtgat gcacttgata ccgtgttaag ggattaccag      1200
     ttaccggagc tacaggttaa tgactggctg atttttccta atatgggtgc ttatacaaaa      1260
     gctgctggat caaatttcaa tggatttaac acatccgcca ttgttactca ccttgcttat      1320
     gcttatccaa actaatgatt aattaggctt taattagcat ggtcattgta attttttttc      1380
     ttctaatttt gttcttgttt ggtaatttat tttccaatca gcttgtagtt tcttttttct      1440
     ttttggtctc ataagataag caaggattag tcaattggat ttgcatgtac ttatatttta      1500
     tgtctaaata atccaatttc atgt                                             1524
//
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