 |
|
EBI DbfetchID AF030176; SV 1; linear; genomic DNA; STD; PRO; 7000 BP. XX AC AF030176; XX DT 05-AUG-1998 (Rel. 56, Created) DT 15-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Rhodococcus opacus putative transposase gene, partial cds; and putative FAD DE synthetase, putative short-chain dehydrogenase/reductase, maleylacetate DE reductase (macA), and putative transcription factor genes, complete cds. XX KW . XX OS Rhodococcus opacus OC Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales; OC Corynebacterineae; Nocardiaceae; Rhodococcus. XX RN [1] RP 1-7000 RX PUBMED; 9657989. RA Seibert V., Kourbatova E.M., Golovleva L.A., Schlomann M.; RT "Characterization of the maleylacetate reductase MacA of Rhodococcus opacus RT 1CP and evidence for the presence of an isofunctional enzyme"; RL J. Bacteriol. 180(14):3503-3508(1998). XX RN [2] RP 1-7000 RA Seibert V., Schloemann M.; RT ; RL Submitted (15-OCT-1997) to the EMBL/GenBank/DDBJ databases. RL Institute for Microbiology, University of Stuttgart, Allmandring 31, RL Stuttgart 70569, Germany XX FH Key Location/Qualifiers FH FT source 1..7000 FT /organism="Rhodococcus opacus" FT /strain="1CP" FT /mol_type="genomic DNA" FT /db_xref="taxon:37919" FT CDS complement(<1..788) FT /codon_start=1 FT /transl_table=11 FT /product="putative transposase" FT /note="ORF1; similar to putative transposase of IS117" FT /db_xref="GOA:O84989" FT /db_xref="InterPro:IPR002525" FT /db_xref="UniProtKB/TrEMBL:O84989" FT /protein_id="AAC38799.1" FT /translation="MGGVSVQLFVGDDWSEEHHDVELMDATGRRLSKARLPEGVAGIAR FT LHAMIGDQLGDDVDQSEVAIGIETDRGPWVAALVTAGYTVFAVNPLQAARFRERSGVSG FT AKSDAADAHVLADMVRTDSHQLRTVAGDSPEAEAIKVVARAHKTLIWERTRHTQRLRHA FT LREYFPAALEAFDDLDAADALDLLGKAPDPASAAQLTRGQITAALRKARRRDIETKTDR FT IQAALRGEQLGRAAVITTAYAATVRSAVALLTTLNAEIKAL" FT CDS complement(1497..2243) FT /codon_start=1 FT /transl_table=11 FT /product="putative FAD synthetase" FT /note="ORF3; similar to FAD synthetase of Corynebacterium FT ammoniagenes" FT /db_xref="GOA:O84990" FT /db_xref="InterPro:IPR014729" FT /db_xref="InterPro:IPR015864" FT /db_xref="UniProtKB/Swiss-Prot:O84990" FT /protein_id="AAC38800.1" FT /translation="MPVAEATTATGLASHNGRQSGVAIGAFDGVHLGHRQVLVGCDTVL FT TFDPHPMHVLAPRPALRLLSDRRTKLRKLEALGIRRVAFIPFDEGWSRVTADDFVERVV FT IDRLHASRVSVGANFRFGAHGVGTPETFNNYQSLQTRVVQLVQRGPGAEPISSTRIRKL FT VAAGNIEDAIDLLGGPFSLPAVAVSESRLVIADEFALPAPGLYSAQVDGNAVSLRTFIE FT GVVELTHPASLQRDTTVEVSFLNRMA" FT CDS 2455..3264 FT /codon_start=1 FT /transl_table=11 FT /product="putative short-chain dehydrogenase/reductase" FT /note="ORF4" FT /db_xref="GOA:O84991" FT /db_xref="HSSP:1Q7B" FT /db_xref="InterPro:IPR002198" FT /db_xref="InterPro:IPR002347" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:O84991" FT /protein_id="AAC38801.1" FT /translation="MASGWNLDGRTALVTGGSRGLGFSIAQALLERGAKVAIIARDDAA FT VKAAAGRLDSGAGAQNVLPIVADVADSDSIHEALAQVHEWQGRLDIVVNNAGPQLAPSP FT VTDADENVLTSAFDTKLLGFLRVSKAALPFLSQDGTGSIVNVAGATAHVPIPNTGVTGI FT VNASVVALTSFLATEAAAKNIRVNAISPGMTKTEGWLAKNDAAAQQQDKTADEIRAGVV FT QGLGIRLGRWAEPAEIGAAAAFLASDDASYITGQVLRVDGGLSKPVA" FT CDS 3311..4384 FT /codon_start=1 FT /transl_table=11 FT /gene="macA" FT /product="maleylacetate reductase" FT /EC_number="1.3.1.32" FT /db_xref="GOA:O84992" FT /db_xref="InterPro:IPR001670" FT /db_xref="UniProtKB/Swiss-Prot:O84992" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="AAC38802.1" FT /translation="MAERSSEFVFTGNPARVIFGAGRMRNVREEVERLGRGRVLLLGSE FT NLREVCDQVQDLLGELFVNRYDGAAMHTPVEVTDIALAQLRTSEADCVVAIGGGSTTGL FT AKALAARTGVDQVILPTTYAGSEVTPVLGETVEGRKTTRSTLAVLPETVIYDVELSKNL FT PVPIAVASAVNALAHAVEAMYSPDANPVVDTWALEAAQALARGLRGLVSDPSCRRIRTD FT LLRGSWLAGMCLGSVGMAVHHKLCHTLGGAFGLPHAPTHTVVLPYAMSFNASEVPDVMD FT SLASAMNVSNAPAGVWDLIADAGGPTSLASLGLLQTDLDRAADLATEAPYRNPRQITRS FT GIRDLLQSAWEGNRPPE" FT CDS 5050..5328 FT /codon_start=1 FT /transl_table=11 FT /product="putative transcription factor" FT /note="ORF6; similar to WhiB of Streptomyces coelicolor FT A3(2)" FT /db_xref="InterPro:IPR003482" FT /db_xref="UniProtKB/TrEMBL:O84993" FT /protein_id="AAC38803.1" FT /translation="MPNGRQANRQSGLRREWRFHASCRSVSPDVFFGPDGERYGPRIRR FT EREAKRICSSCLVLADCRAYAEESREGFGIWGGASEHERRALIGAVG" XX SQ Sequence 7000 BP; 1353 A; 2088 C; 2196 G; 1363 T; 0 other; agcgccttga tctccgcgtt cagtgtggtc agtagcgcca cggcagagcg gacggtcgcc 60 gcgtaggcgg tggtgatcac cgccgcccgg cccagctgct caccgcgcag ggcggcctgg 120 atccgatcgg tcttggtctc gatgtctcgg cggcgggctt ttcgcagcgc cgccgtgatc 180 tgtccccgtg tcagttgtgc cgccgaggcc gggtcgggtg ccttcccgag caggtcgagg 240 gcgtcggcgg cgtcgagatc gtcgaacgcc tccaatgcgg ccgggaagta ctcgcgcagt 300 gcgtgtcgca gtcgctgggt gtggcgggtg cgttcccaga tcaatgtctt gtgggcccgg 360 gcgacgactt tgatcgcctc ggcttcgggg ctgtcgccgg ccaccgtccg cagctggtgc 420 gaatcggtgc gcaccatgtc cgccaacacg tgtgcgtcgg cggcgtcgct cttcgctccc 480 gagacaccgc tgcgttcccg gaaacgggcc gcctgcaacg gattcaccgc gaatactgtg 540 taaccggcgg tcaccaacgc cgccacccac gggccccggt cggtctcgat tccgatcgcc 600 acctcggact ggtcgacgtc gtcgccgagt tggtcgccga tcatcgcgtg taaccgcgcg 660 atcccggcaa ccccttccgg caatcgtgcc ttgctcagcc tccgtccggt cgcatccatc 720 agctcgacat cgtgatgctc ttccgaccag tcatctccca cgaacaactg cactgatact 780 cctcccatcg tcctcgagct cgaccacgtt cggtagcgtg cggaagaacc atcagcgccc 840 taatgaagca gtgctcacgc cggagcgggc acgacatccc atcagcgatt ccgttctccc 900 ggcggacggg caggggcacg atcttttttc aggactccac gttgtccagg ggggagaagt 960 gctcacctgc ccgccgctac cggtgacgag tctgccgtat gaccgggact cgctgactct 1020 cattaggggg gatcgctgac cggtcccagt ccggtcgacc gcggcaagaa gggatcgaag 1080 atccacgtcc tgtccgaaac gaatggaatc ccactggtcg tgggcgtgac cggggcgaac 1140 acccacgaca gcacgatgct gcaaccattg gtggcagcga ttccggcggt gaagtccagc 1200 gcggaccacg ccgacgcaag ccgggaaggc ttcgcgccga caagggctac gactacgaca 1260 ttcaccgacg gtggctgcgc gaacgaggca tcgtcccgcg gatcgcccgc cgtggcattg 1320 agcgaaacga tcgcctcggc cggtaccggt ggaagatcga acgcaccatt ggctggctca 1380 ccggctaccg gcgtatgacc atccgctacg agcgccacgg cgaacacttc gccgggttcc 1440 ttcacctcgc cgccgcactg acctgcttca agaaactccc cacatgagac acgctcttag 1500 gccatgcgat tcaagaagga cacctcaacg gttgtatccc gttggaggga cgcggggtgc 1560 gtgagttcca caacaccttc gataaacgtg cggagtgaga cggcgttgcc gtccacttgt 1620 gcgctgtaga ggccgggcgc cggcagcgcg aactcgtcgg cgatgacgag tcggctctca 1680 cttacggcga cggcaggcaa tgagaacggg ccgcccagta gatcgatcgc atcctcaata 1740 ttgcccgcgg cgacgagttt gcggattcga gtggacgata tcggctctgc acccggacca 1800 cgctggacaa gttgcaccac tcgggtttgg agcgattggt agttgttgaa agtttcggga 1860 gttcccaccc catgcgcacc gaatctgaag tttgcaccca cgctgacgcg gctcgcgtgg 1920 aggcggtcga ttacgactcg ttcaacgaag tcgtcagcag tcacgcgcga ccaaccctcg 1980 tcgaacggaa taaacgcgac acgacgaatc ccgagtgcct caagcttgcg cagcttggtc 2040 cgacggtcgc taagcaggcg aagagctggt cgcggagcca gtacatgcat gggatggggg 2100 tcgaaggtaa ggacggtgtc gcaaccgacc agcacctgac ggtgcccgag gtgaactccg 2160 tcgaatgcac ctatggctac gccggactgc cgaccgttgt gacttgcaag tcctgtcgca 2220 gtggtagctt ccgcgacggg cattttcaga tccagaatct ccacgcctat ccccttcgag 2280 tcggccgcat gaggtcgact gtgcactctc gaccgttagc cgactggaag gtctgcccac 2340 cccctgtgtc ggcgatgtga acgcgtcgtt aaccgtcctt gcatggtcga cgctgctggg 2400 atgcacttgg cggacgaact gcgcaacagc agaaacataa aggagacgcg agaaatggct 2460 tcaggttgga acttagacgg gcgaacagca ctggttaccg gtggaagtcg aggcctaggg 2520 ttctctatcg ctcaggcctt gcttgagcgc ggcgcaaagg tcgcgatcat cgctcgagac 2580 gatgcagctg tgaaggctgc cgcaggacgc ctcgattccg gggctggcgc gcagaatgtg 2640 ctccccatcg ttgcagatgt cgcggatagc gattccatcc acgaagcgct cgcccaggtc 2700 cacgaatggc aaggtcgact cgatatcgtc gtcaacaacg ctggtcccca gttggctccg 2760 tcaccggtga ccgacgcaga tgagaacgta ctgacctcgg ctttcgacac caagcttctc 2820 ggcttcctcc gcgtgtccaa ggcagcgttg ccgttcctga gccaggacgg cactggaagt 2880 atcgtcaacg ttgcgggtgc aactgcacac gttccgatcc cgaacaccgg cgtcaccggc 2940 atcgtcaacg catctgttgt tgccctgacc agcttccttg caaccgaagc ggcagcgaag 3000 aacattcgag tgaatgccat ttcccccggc atgaccaaga cagaaggctg gcttgcaaag 3060 aatgacgcgg ccgcccagca gcaggacaag actgccgatg agattcgcgc gggtgttgtg 3120 cagggactgg gtatccggct gggcagatgg gcagagcccg ccgagatcgg cgcggcagca 3180 gcgtttctgg cctccgatga cgcctcatac atcactgggc aggtcctgcg agtagacggt 3240 ggtctcagca agcccgtggc ctgatcgcta caaagtcaca acagaggacg aaagataggt 3300 agaaccgacc atggctgagc gctcctccga gtttgttttc acaggcaatc cggctcgggt 3360 gatcttcggg gcggggcgga tgcgcaatgt ccgcgaggag gttgaacgac tgggccgtgg 3420 tcgagttcta ctgctgggta gcgagaattt acgagaagtc tgcgatcagg tacaggatct 3480 actcggagaa ctcttcgtca acaggtacga cggagcggcg atgcacacgc cagttgaggt 3540 taccgacatt gcgctggcgc agctccggac aagtgaagct gactgtgtag ttgcaatagg 3600 cggcggctcg accacggggt tggccaaggc cttggcggca cgaactggcg tggaccaggt 3660 catactgccg actacctacg ccggctccga ggttactccc gttctcgggg aaactgttga 3720 aggtaggaag acaactcgat cgacgctcgc agtcctcccc gagaccgtca tctacgatgt 3780 tgagctctcc aaaaatttgc ccgtcccgat tgccgttgca agcgcagtca atgccctcgc 3840 tcacgcggtc gaagccatgt actcgccgga cgccaaccca gtcgttgata cgtgggcgct 3900 ggaggcggcg caagcactag cgcgtggctt acggggtctc gtgagcgatc catcctgccg 3960 tcgcatccgc acggatttgc tcagaggttc gtggttagcg ggaatgtgtc tcggttcggt 4020 tggcatggcc gtacatcaca agctgtgcca tacgttagga ggggctttcg gacttccgca 4080 cgctccgacc cacacggtag ttctgccgta cgctatgagc ttcaatgcat ctgaagtacc 4140 cgacgttatg gactccctcg cttcagcaat gaatgtctca aacgcgccgg cgggcgtatg 4200 ggacctcatc gcggatgcgg ggggtcccac ctcacttgcg tcgctgggac tgctacaaac 4260 agatctggac agggcagcgg atctcgccac cgaagcgccg taccgcaacc cacgtcagat 4320 cacacgaagc ggcatccgag atcttctgca atccgcatgg gaaggcaatc gcccgcccga 4380 atagggatcg gccaactgac gcgctcgcag gacagtcgaa ccgctaatcg aaggccccct 4440 gcggaatcca gaatgggttc gctcgtagag attcgcctct cggaagttgc tctctgccgg 4500 acgcagagcc ccgcgaggag cacgatttga agctgaattt cagcgaagaa gctgcatttt 4560 actcaggtaa atggtgatag tggtgcccaa acgtatccat aacctatcca tgaatccaga 4620 aaacctgcag gtgccgcgtg ccgcgatgag tgagcgggaa gaatcggatg ttcgcaccta 4680 ccgacgatgg cgagaccgta ggcgtgaagc ctatctgcaa cggccaaata gccagccgcg 4740 actcagtact gacatggagg acatgcttcg gttcgccagg atctgggcgc ccttcggagg 4800 tgtgcccgaa tatgagacat tcgttcgatt tggaatttcc attgacaagc tcgttgatag 4860 gctgtcgcgt attctggacg actactcaag gaattcggca tcttcgtgag ccgctgtgtt 4920 ggaaccgaat atgggttccg gcgcgttgtc ctcgtgggct ggcaattctt ccttaggcct 4980 acgggggttc ttcggttgcg ccttcgtcgg ggggggttaa caatgcatct ttcgaaacga 5040 gaacaatcca tgccgaacgg gcgccaagct aatcgccagt cagggctacg acgggagtgg 5100 cgctttcatg cgagctgtcg cagtgtcagt ccggacgtat ttttcgggcc ggatggcgag 5160 cgatacggcc cccgaatcag gcgtgaacgt gaagcaaaac ggatctgcag cagttgcttg 5220 gtccttgcgg attgccgggc ttacgccgaa gaatcacgtg aaggatttgg gatctggggc 5280 ggcgcttccg agcacgagcg ccgtgcacta attggtgccg tcggctgaac tgactttcct 5340 gtatcaatga ggtgggtgcc ccagtatggg aaggcgccag cggtggtgtc tgtgggtgat 5400 tgggcggaca tccgccgatt gcgtcggccc gaggggcgcc gatcgaaatc gctcggaaat 5460 tgggatcaag gaacggtacg gtcgcaagtg gtgggcggct ccccagctac gtcgacggcc 5520 ctcaccgctg cgacggaacg aatcttcggg caacccgtta cggcaccgga ggaaacgacg 5580 ctcgaagagt tccgccgatg tcgtaccgtt cggcacttgt gcgcgaaccg tggaaacgag 5640 gtgccacaca ccgggttgcg gatcgatatc gaagcagttc cgaatacctg aaccgttcca 5700 agtattgcca cccgtcccag gtcgttgcgg accaggtcca cgatcattac accctccgcg 5760 acgtccttgg tggactcccg tagtgccttc acgggtccgc agtcggcggc agtgcccctt 5820 gattgggata gaggtgacga tgtatccgtc ccgtgcgagg tagagctctg ggagaacaag 5880 gcgatcgctc cccagtcacc ctcgatgtac gacgcccgtt tctggattag tctgttagat 5940 cccatcgctg aagggtgcag gggcgtccct gtgtgctggt cggtagaagg gtgcatatgc 6000 aactttggta tgcctcgcca caccggatag cttcgacgtt ctggcgatga ctgtcacgat 6060 caggcgccgc ccattttagg gaccaaccgt cctctgcagg ttgagggttg acggtagcgc 6120 tgacgatgtc gtccgggcac ctttcgtcgg taagactctc ttaccaccag acccgtcgat 6180 atccaaccgg agaacggaac tgtccagctg ccggccgctg cgggatgtct accttcaccg 6240 tctgggtacg cgacgtactc cacacaagca caaccgattt cgggttcacc atctggcgaa 6300 gcggcctgtg gacgcaccag cggtcgacct ggaatacatc tcgccttgca atcctgggtg 6360 ctataacagc agaggctccg aaccatctcc ccaccagcgc cgctggtggg ggcatctcga 6420 attgaagcgc ccgcgcatag agtgctcgca gcacttcggt cgggtgaccg ccagggcata 6480 gtcgatctaa acctgaattc accgattcgc tgacctgatc gctgcgagtt tcgttgggcg 6540 gcatggaacg gtgtgtgggc atggttgagc gtccgacctc tcgtgtcggg ttgttccact 6600 gggtctttcg cgtcgagggc gggcaagtgt cctgggcgtt aggcgacgat cgggtgtgcg 6660 cgaccgaaag tgatgtcgaa caagttgtgc aacgctgttt cccacggcca gtcggtcggc 6720 aggtgcagcg tcaaccgtct cgccgaggac gcgatgcgcg cggggaccga gacgagggtg 6780 cgccggaggg tgccggtggt cgctttcgtc agcttcggat cgctggtgag ggtgccggca 6840 gcgcgggtga gattgaacgc catcaccgcg cagaccagcc aggcggcgtt cgccgaaaac 6900 gagttcgacg gtaaatgcgc gagagcggag ttcttcagat ccgcatgcac ctgctcgatg 6960 acggcgtgct gacggtggat tttgtcggcc gtgacggtac 7000 // |
|