 |
|
EBI DbfetchID AF028019; SV 1; linear; genomic DNA; STD; PRO; 1940 BP. XX AC AF028019; XX DT 13-MAY-1998 (Rel. 55, Created) DT 13-MAY-1998 (Rel. 55, Last updated, Version 1) XX DE Cytophaga xylanolytica XM3 alpha-L-arabinofuranosidase ArfII (arfII) gene, DE complete cds. XX KW . XX OS Cytophaga xylanolytica OC Bacteria; Bacteroidetes; Sphingobacteria; Sphingobacteriales; OC Flexibacteraceae; Cytophaga. XX RN [1] RP 1-1940 RX PUBMED; 9572972. RA Kim K.S., Lilburn T.G., Renner M.J., Breznak J.A.; RT "arfI and arfII, two genes encoding alpha-L-arabinofuranosidases in RT Cytophaga xylanolytica"; RL Appl. Environ. Microbiol. 64(5):1919-1923(1998). XX RN [2] RP 1-1940 RA Renner M.J., Breznak J.A.; RT "Purification and Properties of ArfI, an alpha-L-Arabinofuranosidase from RT Cytophaga xylanolytica"; RL Unpublished. XX RN [3] RP 1-1940 RA Kim K.S., Lilburn T.G., Renner M.J., Breznak J.A.; RT ; RL Submitted (03-OCT-1997) to the EMBL/GenBank/DDBJ databases. RL Microbiology, Michigan State University, Giltner Hall, East Lansing, MI RL 48824, USA XX DR StrainInfo; 115626; XM3. XX FH Key Location/Qualifiers FH FT source 1..1940 FT /organism="Cytophaga xylanolytica" FT /strain="XM3" FT /mol_type="genomic DNA" FT /db_xref="taxon:990" FT CDS 293..1897 FT /codon_start=1 FT /transl_table=11 FT /gene="arfII" FT /product="ArfII" FT /function="alpha-L-arabinofuranosidase" FT /EC_number="3.2.1.55" FT /note="arabinosidase" FT /db_xref="GOA:O68279" FT /db_xref="InterPro:IPR010720" FT /db_xref="InterPro:IPR017853" FT /db_xref="UniProtKB/TrEMBL:O68279" FT /protein_id="AAC38457.1" FT /translation="MKKRMSIQKRIAFNGALVLAFMLTMCTPKPPQNEDVVKMSVDVTQ FT SGPEINRHIFGQFAEHLGTGIYGGIWVGPESEIPNTRGIRNDVVKALKAIKVPNVRWPG FT GCFADQYHWRDGIGAPEERKSRINVSWGGSPEANTFGTHEYFDFISQIGSEAFISANVG FT SGTVQESADWLEYLTASGSTLALERARNGHPDPYDVAFWGVGNEVWGCGGPFTPQEYIT FT ELKKFATFTNNYNANVNTQFVAVGPDSFDEYSFGYPEAIMEAWAKKTWTWDIQGLSLHM FT YTRGGWPAVIPATGFNESGYAAVIKETLEMDKFISDNRAIMDKFDPEHKVSIMVDEWGT FT WYAPTEGTNPGFLQQQNSQRDAVLAALNFNIFIRHAERVKGANIAQMINVLQAMILTEG FT EKMVLTPTYHTFRMYVPFQDATRLPINFNKGFYKEGTIELPRVDAIAAKGRDGKIYVAI FT TNIDPKNNASLDLSFDEQTIKDVKGETLYASAIDAVNTFDNPNNVAPTSINASLTGSNV FT SVTVQPQSVTVLEIVSE" XX SQ Sequence 1940 BP; 502 A; 438 C; 489 G; 511 T; 0 other; aattcatggc cggtgatgta cgtttcgcaa ggactctttt ttctcttaag gaaacgatat 60 ggattgttga ttcaatgtcg ttaagttagt gcgattcaca aaagagacaa gaagatgatg 120 agactaaaga cagatagatt agactgaaga gacgaagttc acggatctaa atatctgttt 180 tttcatctca tcatctgtct cttcgtctga catctttttc tcttaactaa acgacattga 240 ttgttgattt gtcgtttgat gattgatttg aaatagtata aattgaaata gtatgaagaa 300 acgaatgagt attcaaaagc gaattgcttt caatggagcc ttggtgttgg catttatgtt 360 gaccatgtgc accccaaaac ctcctcagaa tgaggatgtc gtaaaaatgt ccgtcgacgt 420 cacgcaaagt ggccctgaaa tcaaccgtca catctttggc cagtttgccg aacatttggg 480 cacgggcatt tacggcggca tttgggtggg acccgaatcg gaaatcccca atacccgcgg 540 gattcgtaat gatgtggtga aagctttaaa ggccatcaaa gtgcccaacg tgcgctggcc 600 gggcggttgt tttgccgatc agtaccactg gcgcgatggc atcggtgcac ccgaggaacg 660 caaaagtcgc atcaatgtca gctggggcgg tagtcccgaa gccaacacct ttggcacgca 720 tgaatatttc gatttcattt ctcaaattgg ttccgaagcc tttatttcgg ccaatgtggg 780 atcgggtact gtgcaggaat cggctgattg gctggagtat ctcacggctt cagggtcgac 840 attggctctc gagcgtgccc gaaacggtca ccccgacccc tacgatgttg ccttttgggg 900 cgtgggcaac gaagtgtggg gatgcggcgg tccttttacc ccgcaggaat atatcaccga 960 gcttaaaaag tttgccactt ttaccaataa ctacaatgcc aacgtcaata ctcagtttgt 1020 tgcggtgggc cccgactcgt ttgatgaata cagctttggc tatcccgaag ccatcatgga 1080 ggcctgggca aagaaaacct ggacctggga tattcaaggg ctttcgttgc acatgtacac 1140 gcgtggcggc tggccggcag tgattcctgc taccggtttc aacgaatcgg gatacgcagc 1200 agtcattaag gaaactctgg aaatggacaa atttatcagc gacaatcgcg ccatcatgga 1260 taagttcgac cccgaacaca aagtgtcgat catggtggat gagtggggca cctggtatgc 1320 acccaccgaa gggaccaatc ccggttttct gcaacagcaa aactcacaac gcgatgctgt 1380 gttggcggct ttgaatttca acatctttat tcgtcatgcc gagcgggtga aaggggctaa 1440 cattgcccag atgatcaatg tgttgcaagc catgattctg accgaaggtg agaagatggt 1500 gctcacaccc acttatcaca ctttccgcat gtacgtgcct tttcaggatg ctacgcgttt 1560 gccaatcaat ttcaataaag gcttttataa agaaggaacc attgaattgc cgcgtgtgga 1620 tgccattgct gccaaaggaa gagatggcaa aatttacgtg gccatcacca atatcgaccc 1680 caaaaacaac gcttcgttgg atctctcgtt tgatgagcaa accatcaagg atgtgaaggg 1740 ggaaacgctg tatgcttcgg ccattgatgc tgttaacaca tttgacaacc ctaacaatgt 1800 tgctcctaca tccattaacg caagtttaac gggcagcaat gtgtcggtaa cggtgcagcc 1860 tcagtcggtc acggtgctcg aaattgtatc ggagtgattg cgtttggagg ttttggttta 1920 tagcatccac ctgttctgtg 1940 // |
|