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EBI DbfetchID AF027500; SV 1; linear; genomic DNA; STD; PRO; 5292 BP. XX AC AF027500; XX DT 26-APR-1999 (Rel. 59, Created) DT 15-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Aquifex pyrophilus alanyl-tRNA synthetase (alaS) gene, complete cds; and DE ATP-dependent Clp protease regulatory subunit (clpA) gene, partial cds. XX KW . XX OS Aquifex pyrophilus OC Bacteria; Aquificae; Aquificales; Aquificaceae; Aquifex. XX RN [1] RP 1-5292 RX DOI; 10.1007/PL00006496 RX PUBMED; 10198119. RA Klenk H.P., Meier T.D., Durovic P., Schwass V., Lottspeich F., Dennis P.P., RA Zillig W.; RT "RNA polymerase of Aquifex pyrophilus: implications for the evolution of RT the bacterial rpoBC operon and extremely thermophilic bacteria"; RL J. Mol. Evol. 48(5):528-541(1999). XX RN [2] RP 1-5292 RA Klenk H.-P., Schwass V., Zillig W.; RT ; RL Submitted (30-SEP-1997) to the EMBL/GenBank/DDBJ databases. RL Max-Planck-Institute for Biochemistry, Martinsried 82152, Germany XX DR StrainInfo; 368525; Kol5a. XX FH Key Location/Qualifiers FH FT source 1..5292 FT /organism="Aquifex pyrophilus" FT /strain="Kol5a" FT /mol_type="genomic DNA" FT /db_xref="taxon:2714" FT CDS 38..2653 FT /codon_start=1 FT /transl_table=11 FT /gene="alaS" FT /product="alanyl-tRNA synthetase" FT /EC_number="6.1.1.7" FT /note="alanine-tRNA ligase" FT /db_xref="GOA:Q9XDM3" FT /db_xref="InterPro:IPR002318" FT /db_xref="InterPro:IPR003156" FT /db_xref="InterPro:IPR012947" FT /db_xref="InterPro:IPR018162" FT /db_xref="InterPro:IPR018163" FT /db_xref="InterPro:IPR018164" FT /db_xref="InterPro:IPR018165" FT /db_xref="UniProtKB/Swiss-Prot:Q9XDM3" FT /protein_id="AAD25871.1" FT /translation="MGFSAHEIRELFLSFFEKKGHTRVKSAPLVPENDPTLLFVNAGMV FT PFKNVFLGLEKRPYKRATSCQKCLRVSGKHNDLEQVGYTSRHHTFFEMLGNFSFGDYFK FT KEAIEYAWEFVTEVLKLPKERLYVSVYKDDEEAYRIWNEHIGIPSERIWRLGEEDNFWQ FT MGDTGPCGPSSEIYVDRGEEYEGEERYLEIWNLVFMQYNRDENGVLTPLPHPNIDTGMG FT LERIASVLQGKNSNFEIDIIYPLIEFGEEVSGKKYGEKFETDVALRVIADHLRAITFAI FT SDGVIPSNEGRGYVIRRILRRAMRFGYQLGITEPFLYKGIDLVVDIMKEPYPELELSRD FT FVKGIVKGEEERFIRTLRSGMEYIQEVIEKALSEGRKTLTGKEVFTAYDTYGFPVDLIQ FT EIAKEKGLEIDLEGFQCELEEQRERARKSFKIETKEVKPVYAHLKELGITSRFVGYEHL FT EYETEVLGIIVGDEIVSEIKEGEEGEIILRETPFYPEGGGQIGDSGIIETDKGIFKVED FT TQRPTEGIIVHIGKLLKGKISVKDIVHARVDKERRWDIMRNHTATHLLHAALRNLLGEH FT VRQAGSLVADKYLRFDFTHFSPLTEEEIKRIEELVNEKIRENLPVSVMEMAYQEALQTG FT AIAIFEEKYGERVRVISCGEFSKELCGGTHVSATGDIGYFKIISESSVGAGVRRIVAQT FT GRWAVNTAFEEHTTLKKVSNALGVKEDEVVQKVEELKEEIKEKEKEIQKLRQEILKLQI FT REKVKEERHRELTLYYGVFEDVEPEELRNLADILRQRTGKDVVFIASKKEGKINFVIAS FT SKGISKEVRANELIRQVGKVLKGGGGGREDLAQGGGKAPDKFDESVKLLKELLSGVSVG FT " FT CDS 3400..>5292 FT /codon_start=1 FT /transl_table=11 FT /gene="clpA" FT /product="ATP-dependent Clp protease regulatory subunit" FT /db_xref="GOA:Q9XDM2" FT /db_xref="HSSP:1JBK" FT /db_xref="InterPro:IPR001270" FT /db_xref="InterPro:IPR001943" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR003959" FT /db_xref="InterPro:IPR004176" FT /db_xref="InterPro:IPR013093" FT /db_xref="InterPro:IPR018368" FT /db_xref="UniProtKB/TrEMBL:Q9XDM2" FT /protein_id="AAD25872.1" FT /translation="MGQVTRGSHSGEVLFAPDAKRVIEFAVEEARILHHQFVGPEHLLI FT GVVREKTGLGGRILRSFGLDEYSVRREVLQLLGELPPQESQRYVSTPNLDRFSRDLTQM FT AREGKLDPVIRKEREIERVIQILVRRRKNNPVLLGDPGVGKTAIVEGLAQRIANREVPE FT PLLNKRVVALDLAALVAGTKYRGQFEERLKNILKELEKANNVILFIDELHTLVGAGSAE FT GSIDASNMLKPALARGEIQVIGATTVDEYRKYIEKDGALERRFQPVYVEQPSPEDTIQI FT LYGLKPKFEEFHKVEYTPESIEKAVELSVKYITDRNLPDKAIDVMDEAGALVKLKASQL FT PPELKELEEKIKEYEKEKEKAVKEQDYEKAAKIRDEELRLRAKFETMKAKWKEEMEKNR FT PKVTEEDVAEVVARWTGIPVKRVHESDAEKLLHIEEELKKRVIGQDEAIKAVAKAIRRS FT RVGLKGKHRPIGVFMFLGPTGVGKTETAKALAEYLFGTEDALIRFDMSEYMEKHTVSRL FT IGAPPGYVGYEEGGQLTEAVRRRPYSVLLFDEIEKAHPDVFNVFLQIFDDGRLTDGLGR FT TVDFSNTIIIMTSNLGARLITGGTMGFEKKQGLLDFEEMKKNVLDQVKKTFSPEF" XX SQ Sequence 5292 BP; 1700 A; 1044 C; 1470 G; 1078 T; 0 other; tcttctttaa gaaaaaacta taatttaaac tttagctatg ggttttagcg cgcacgagat 60 tagggaactc tttctgagct tctttgagaa aaagggacac acgagggtaa agtctgcccc 120 actggttccc gaaaacgacc ccaccctcct tttcgtaaac gcgggaatgg ttcccttcaa 180 gaacgtcttt ctcggtcttg aaaagagacc ctataaaagg gcaacctcct gccagaagtg 240 tctcagagta tcgggaaagc acaacgacct tgagcaggtg ggatacacat caagacacca 300 tacattcttt gagatgctcg gaaacttctc cttcggtgat tacttcaaga aagaagccat 360 agaatacgcc tgggagttcg tcacggaagt tctgaaactt cccaaggaga ggctctacgt 420 ttccgtttac aaggacgacg aggaggcata ccgcatctgg aacgaacaca taggcattcc 480 ctccgaaagg atatggagac tgggggagga agataacttc tggcagatgg gagatacggg 540 cccctgcgga ccttcctccg agatatacgt tgacagaggg gaggaatacg aaggagagga 600 gagatacctt gagatatgga acctcgtttt tatgcagtac aacagggatg aaaacggggt 660 tctcacaccc cttccccacc cgaacataga cacgggaatg ggtcttgagc gtatagcttc 720 cgttctgcaa ggtaaaaact caaactttga gatagacata atatacccac tcatagagtt 780 cggggaagaa gtatcgggaa agaaatacgg ggagaagttt gaaacagatg ttgccctcag 840 ggtgatagcg gaccacttaa gggcaataac ctttgccata tccgacggag ttattccctc 900 aaacgaggga aggggatacg ttataaggag gattctcaga agggctatgc gtttcggata 960 ccagctcggc ataactgaac ccttcctata caaaggcata gacctcgtag ttgatataat 1020 gaaggagcct taccccgagc ttgagctttc ccgcgatttc gtaaagggaa tagtaaaggg 1080 agaagaggaa aggtttataa gaaccctcag gtccggaatg gaatacatac aggaggtaat 1140 tgagaaagcc ttatcggagg gaaggaagac cctaacgggt aaggaggtgt ttaccgccta 1200 cgacacttac ggatttcccg ttgacctcat tcaggagata gcaaaggaaa aggggcttga 1260 gatagacctt gaaggctttc agtgcgagct tgaggaacaa agggagaggg cgagaaagag 1320 ctttaagata gaaacgaagg aagtaaagcc cgtttacgca caccttaagg agctcgggat 1380 tacctcaagg ttcgtgggat acgaacacct tgagtatgag acggaagttc tcggcataat 1440 agtgggggac gagattgtga gcgagattaa agagggagag gaaggggaga taatactcag 1500 agagactccc ttttaccccg aaggaggcgg tcagataggg gatagcggaa taatagagac 1560 ggacaaggga atattcaagg ttgaggacac ccagagacca accgagggga taattgtcca 1620 cataggtaag ctcctcaaag gaaagataag cgtaaaagac atagttcacg caagggttga 1680 taaggaaaga agatgggaca taatgagaaa ccacaccgcc acccaccttc ttcacgcagc 1740 actcagaaac ctgctcggtg aacacgtaag gcaggcgggc tcgctcgttg cggataaata 1800 cttaaggttt gacttcaccc acttttcccc cctcactgag gaagagataa agagaataga 1860 agagctcgtg aacgagaaga ttagggaaaa ccttcccgta agcgttatgg agatggctta 1920 tcaggaagcc ctccagacgg gtgccatagc gatatttgag gagaaatacg gagagagggt 1980 gagggtaatc tcctgcgggg agttctcaaa ggagctttgc gggggaaccc acgtttccgc 2040 aacgggagat ataggctact tcaagataat atccgaaagc tccgtagggg cgggagtgag 2100 gaggatagtg gcccagacgg gaaggtgggc tgtaaacacc gcctttgagg agcatacaac 2160 cctgaaaaag gtttcaaatg cactgggcgt taaggaagat gaggtagttc aaaaagttga 2220 ggaattaaaa gaagagataa aggaaaagga aaaggagata cagaaattaa ggcaggagat 2280 acttaagctc cagataaggg aaaaggtgaa ggaagagaga catagggagc ttaccctcta 2340 ctacggagtt tttgaagacg ttgaaccgga agagctcagg aaccttgcgg atatactcag 2400 acagcgaacg ggtaaggacg ttgtatttat agcttcaaaa aaagaaggaa agataaactt 2460 cgttatagcg agctcaaagg gcatatcaaa agaggtaagg gcaaacgagc tcataagaca 2520 ggttggaaag gttcttaaag gaggaggagg aggaagggag gacctcgctc agggaggagg 2580 aaaggcccct gacaagtttg atgaatctgt taaattacta aaggaactct tatcgggagt 2640 aagcgtggga tgaaggagtt tacccgaacg ggcataggtt taaaggatat aagcataagg 2700 ctcctcagcc gactccccca tactcctcac ggggggattc gtttactgcg agctcggcat 2760 acctgtcagg tatctaaagg ttgacgagaa agaggctaaa cttgagatat ctcttgagaa 2820 gatgaggaac ctcgcgaggg cgtgtaagga tttggagacc tttgttgata aggttctcca 2880 agaggtgagc tcagccctac ccgagggtat atcaccgttg ttagggttta cgctgacggc 2940 gtaaaagtaa gagagctttc ctaccttgag gaacaaacac ctataggaag gggaattgtg 3000 atagatgaag agagggaacc agaagaagat atccccccct acgcaaagga aaacagggaa 3060 aaacttttta aaacgcttaa ggagataatc ttacttgagg ttgcatactc cctttaagga 3120 tttaattata ttcctataag attacattat aagggctgtg tcatactctt gaagagaagg 3180 atatttttat cttataaaaa acggtgaggt aggaaacatg tttgagaagt ttacggaaag 3240 agcaaggcaa gttatctaag gcgaggaaga agcccttgaa ctcggagaga gttatctcgg 3300 gagtgagcat atattactcg cacttataaa agaggagata tacctaccct cgttctcgct 3360 aagttcggac tcactcccga caagataaga aaggcggtaa tgggtcaggt gacccgcgga 3420 agccactcgg gagaggtttt atttgctccc gatgcaaaga gagttataga atttgccgtt 3480 gaagaggcga ggatacttca ccaccagttt gtaggacccg aacacctcct tatcggagta 3540 gtaagggaaa agacgggact gggaggaaga attttaagga gcttcggtct tgacgaatac 3600 tccgtaagga gagaggttct ccagcttctc ggagaactgc ctcctcagga aagtcagagg 3660 tacgtatcaa caccgaacct tgacaggttc tcaagggacc tcacccagat ggccagggaa 3720 ggaaagcttg accccgtcat taggaaggaa agagagattg aaagggttat ccagattctc 3780 gtaaggagga ggaagaacaa tcccgttctt ctcggagacc ccggagtagg taagaccgca 3840 atagttgaag gacttgctca aagaatagcc aatagggagg ttcccgaacc actgctgaac 3900 aagagagttg tagcccttga cctcgcagca ctcgtggcgg gaacgaaata caggggacag 3960 tttgaagaaa ggctcaagaa catactgaag gaacttgaga aggcaaacaa cgtaatactc 4020 ttcatagacg agcttcacac cctcgtggga gcgggttcag cggaaggttc aatagatgca 4080 tccaatatgc taaaaccagc gctcgcaagg ggtgagatac aggtaatcgg agcaaccacg 4140 gttgacgaat acaggaagta tatagagaag gacggagctc ttgaaaggag attccagccc 4200 gtatacgttg aacagccctc ccctgaggac acgatacaga ttctttacgg gctcaagccc 4260 aagtttgaag agtttcacaa ggttgagtat acacccgagt caatagagaa ggctgttgaa 4320 ctatctgtca agtacataac cgatagaaac cttcccgaca aggcgataga cgtaatggac 4380 gaagcgggag cactcgtaaa gctgaaggct tcacaacttc ccccggaact caaggagctt 4440 gaggagaaga ttaaggaata cgagaaggaa aaggaaaagg ctgtaaaaga gcaggactac 4500 gaaaaggcgg ctaagataag ggacgaggag ctaaggctca gagcgaagtt tgaaacaatg 4560 aaggcaaagt ggaaggaaga aatggaaaag aacaggccca aggtaaccga ggaggacgtt 4620 gcggaagtcg ttgcaaggtg gaccggcatt cccgtcaaga gagtccacga aagcgatgcg 4680 gaaaagctac tccacataga ggaagaactt aagaagagag taataggaca ggatgaggct 4740 ataaaggctg tagctaaggc tataagaagg tcaagggtgg gactgaaagg taagcacagg 4800 cccataggag tatttatgtt cctcggacct actggtgtag gaaagacgga aaccgctaag 4860 gcacttgcgg aatacctgtt cggaacggag gacgcattaa tcaggtttga tatgtccgaa 4920 tatatggaaa aacacaccgt ttccagactc ataggtgcac ctcccggata cgttggatac 4980 gaggaaggtg gacagctaac cgaagcggta aggagaagac cctacagcgt tctactcttt 5040 gacgagatag agaaggcaca ccccgatgtg tttaacgtat tcctccagat atttgacgac 5100 ggaagactta cggatggact tggaagaacc gttgactttt caaacacgat tatcatcatg 5160 acctcaaacc tcggagcgag actcataacg ggcggaacga tgggatttga gaagaaacag 5220 ggactccttg actttgaaga gatgaaaaag aatgtccttg accaggtgaa gaaaaccttc 5280 agccccgaat tc 5292 // |
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