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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AF025769; SV 2; linear; genomic DNA; STD; PRO; 1218 BP.
XX
AC   AF025769;
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DT   05-NOV-1997 (Rel. 53, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 7)
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DE   Erwinia carotovora subsp. carotovora beta(1,4)-glucan glucanohydrolase
DE   precursor (celB) gene, complete cds.
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KW   .
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OS   Pectobacterium carotovorum subsp. carotovorum
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
OC   Enterobacteriaceae; Pectobacterium.
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RN   [1]
RP   1-1218
RX   DOI; 10.1006/bbrc.1997.7747
RX   PUBMED; 9434760.
RA   Park Y.W., Lim S.T., Cho S.J., Yun H.D.;
RT   "Characterization of Erwinia carotovora subsp. carotovora LY34
RT   endo-1,4-beta-glucanase genes and rapid identification of their gene
RT   products";
RL   Biochem. Biophys. Res. Commun. 241(3):636-641(1997).
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RN   [2]
RP   1-1218
RX   PUBMED; 9666464.
RA   Woo Park Y., Tech Lim S., Dae Yun H.;
RT   "Cloning and characterization of a CMCase gene, celB, of Erwinia carotovora
RT   subsp. carotovora LY34 and its comparison to celA";
RL   Mol. Cells 8(3):280-285(1998).
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RN   [3]
RP   1-1218
RA   Park Y.W., Lim S.T., Yun H.D.;
RT   ;
RL   Submitted (19-SEP-1997) to the EMBL/GenBank/DDBJ databases.
RL   Agricultural Chemistry, Gyeongsang Natl. Univ., 900 Kajwa-Dong, Chinju,
RL   Gyeongnam 660-701, Korea
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RN   [4]
RC   Sequence update by submitter
RP   1-1218
RA   Park Y.W., Lim S.T., Yun H.D.;
RT   ;
RL   Submitted (14-JUN-2004) to the EMBL/GenBank/DDBJ databases.
RL   Agricultural Chemistry, Gyeongsang Natl. Univ., 900 Kajwa-Dong, Chinju,
RL   Gyeongnam 660-701, Korea
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CC   On Jun 14, 2004 this sequence version replaced gi:2570836.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1218
FT                   /organism="Pectobacterium carotovorum subsp. carotovorum"
FT                   /sub_species="carotovora"
FT                   /strain="LY34"
FT                   /mol_type="genomic DNA"
FT                   /clone="pLYCB100"
FT                   /db_xref="taxon:555"
FT   gene            225..1031
FT                   /gene="celB"
FT   RBS             225..229
FT                   /gene="celB"
FT   CDS             237..1031
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="celB"
FT                   /product="beta(1,4)-glucan glucanohydrolase precursor"
FT                   /note="endoglucanase"
FT                   /db_xref="GOA:O31030"
FT                   /db_xref="InterPro:IPR002594"
FT                   /db_xref="UniProtKB/TrEMBL:O31030"
FT                   /protein_id="AAC02965.2"
FT                   /translation="MLTVNKKPQRIFRTLFPVLFSALLLSPLTVSAVSSSKDADKLYFE
FT                   NNKYYVFNNVWGKDEVKGWQQTVFYNSPTSMGWNWHWPSSSSSVKAYPSLVSGWHWTAG
FT                   YTENSGLPIKLSSNKSITSNVTYSIKSTGTYNAAYDVWFHTTDKASWDSTPTDELMIWL
FT                   NNTNAGPAGDYIETVFLGGSSWNVFKGWINAGNGKGWNVFSFVRTSNTNSASLNIRHFT
FT                   NYLVGTKKWMSNTKYISSVEFGTEIFGGDGQIDITKWSVDVK"
FT   sig_peptide     237..344
FT                   /gene="celB"
FT   mat_peptide     345..1028
FT                   /gene="celB"
FT                   /product="beta(1,4)-glucan glucanohydrolase"
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SQ   Sequence 1218 BP; 351 A; 271 C; 251 G; 345 T; 0 other;
     atatctctga caccatccat attatgacta ttcattaccg ctcttattat tattcacatg        60
     aataagattt tcattctact catgattaat gcattgaatt attctgacac tggatggaat       120
     aaccataaaa tgttacgcac cccacacttt acattcaacc aatcgtagac aactgatgaa       180
     tacgtgttag attttaacgt gaaataccca agcatatatt taaaaggaga tttattatgc       240
     ttacagtgaa taagaagcca cagcgtattt tccgtacatt attccccgtg ttattttctg       300
     ccttgttact ctcaccccta accgtttctg cggtcagctc atccaaagac gcagacaaac       360
     tctattttga gaataataaa tattacgtat tcaataacgt ctgggggaag gatgaagtaa       420
     aaggatggca gcaaacggtt ttctataata gccctaccag catggggtgg aactggcact       480
     ggccaagcag cagctccagc gttaaagctt atccatcgct ggtaagcggc tggcactgga       540
     ctgcaggtta tacggaaaat agtgggttgc cgataaaatt atccagtaat aaaagtatta       600
     ccagtaatgt cacttattct atcaaatcta ccggcactta taacgccgct tatgatgtat       660
     ggttccacac taccgataaa gccagttggg attcgacacc gaccgacgaa ttaatgatct       720
     ggctaaataa taccaatgca ggtccagcgg gggattatat tgaaacggta ttcctcggtg       780
     gtagcagctg gaacgtattc aaaggttgga taaatgctgg taatggcaaa gggtggaatg       840
     tcttttcctt tgttcgtacc tccaatacca acagtgcatc gctcaatatt cgtcatttca       900
     ccaactatct ggttggcacc aagaaatgga tgagtaatac aaaatatatc agcagcgttg       960
     agtttggtac cgagatcttt ggcggtgatg ggcagattga tatcaccaag tggagcgtag      1020
     acgtaaaata acggcgctgt cgtcgccttc atttcttccg gttcagcccc gtatcaatgc      1080
     gatcgttagg gctggaccga atttattcca ccccacacgc cttttcatgc tcagtctgga      1140
     cggccttgtt caccctttaa gcaggcgagt cttcccttcc ccaacaagat tcgtgagctg      1200
     tggcacgtaa actcgaga                                                    1218
//
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