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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AF020322; SV 1; linear; genomic DNA; STD; MAM; 865 BP.
XX
AC   AF020322;
XX
DT   10-MAR-1998 (Rel. 54, Created)
DT   14-NOV-2006 (Rel. 89, Last updated, Version 3)
XX
DE   Sus scrofa cholesterol 7alpha-hydroxylase (cyp7) gene, exon 6 and complete
DE   cds.
XX
KW   .
XX
OS   Sus scrofa (pig)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Cetartiodactyla; Suina; Suidae; Sus.
XX
RN   [1]
RP   1-865
RA   Ishimura-Oka K., Li C.M., Chang B.H.J., Pond W.G., Oka K., Chan L.;
RT   "Structure of the porcine cholesterol 7alpha-hydroxylase gene";
RL   Unpublished.
XX
RN   [2]
RP   1-865
RA   Ishimura-Oka K., Li C.M., Chang B.H.J., Pond W.G., Oka K., Chan L.;
RT   ;
RL   Submitted (21-AUG-1997) to the EMBL/GenBank/DDBJ databases.
RL   Pediatrics, Baylor College of Medicine, 1100 Bates Street, Houston, TX
RL   77030, USA
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..865
FT                   /organism="Sus scrofa"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:9823"
FT   mRNA            join(AF020317.1:798..939,AF020318.1:11..251,
FT                   AF020319.1:11..588,AF020320.1:11..141,AF020321.1:11..186,
FT                   11..865)
FT                   /gene="cyp7"
FT                   /product="cholesterol 7alpha-hydroxylase"
FT   CDS             join(AF020317.1:860..939,AF020318.1:11..251,
FT                   AF020319.1:11..588,AF020320.1:11..141,AF020321.1:11..186,
FT                   11..310)
FT                   /codon_start=1
FT                   /gene="cyp7"
FT                   /product="cholesterol 7alpha-hydroxylase"
FT                   /db_xref="GOA:O46491"
FT                   /db_xref="InterPro:IPR001128"
FT                   /db_xref="InterPro:IPR002403"
FT                   /db_xref="InterPro:IPR017972"
FT                   /db_xref="InterPro:IPR017973"
FT                   /db_xref="UniProtKB/Swiss-Prot:O46491"
FT                   /protein_id="AAC04676.1"
FT                   /translation="MMSISLLGGIVTAVCCCLWLLLGMRRRQTGEPPLENGIIPYLGCA
FT                   LQFGANPLEFLRANQRKHGHIFTCQLMGNYVHFITNPLSYHKVLCHGKYLDWKKFHFTA
FT                   SAKAFGHRSIDPSDGNTTDNINKTIIKTLQGDALNLLAAAMMENLQLVLRPQVAPQPEK
FT                   PAWVTEGMYSFCYRVMFEAGYVTLFGKDPIGHDAQKALILNNLDNFKQFDKIFPALVAG
FT                   FPIHVFKTGHYAREKLAEGLRLQKLRKRDHISELVRFLNDTLSTLDDAEKAKSLLAVLW
FT                   ASQANTIPATFWCLFQTIRSPEAMKAASEEVNKTLEKAGQKISLDDKPIYLNQIELDSM
FT                   PVLDSIIKESLRLSSASLNIRTAKEDFTLHLQDGSYNIRKDDIIALYPQLMHLDPEIYP
FT                   DPLTFKYDRYLDENGKTKTTFYSHGLKLKYYYMPFGSGATICPGRLFAVQEIKQFLILM
FT                   LSYFDLELVESHVKCPPLDQSRAGLGILPPSNDIEFRYKLKHL"
FT   intron          <1..10
FT                   /gene="cyp7"
FT                   /number=5
FT   exon            11..865
FT                   /gene="cyp7"
FT                   /number=6
FT   3'UTR           311..865
FT                   /gene="cyp7"
XX
SQ   Sequence 865 BP; 266 A; 156 C; 184 G; 259 T; 0 other;
     tttatcacag acttttaaat atgatcgcta tcttgatgaa aatggaaaga caaagaccac        60
     cttctacagt catggactca agttaaagta ttactatatg cccttcgggt caggggctac       120
     gatctgtcct ggaagattat ttgctgtcca ggaaatcaag caatttttga ttctgatgct       180
     ttcctatttt gacctggagc tggtggagag ccacgttaaa tgtcccccct tggaccagtc       240
     ccgtgcgggc ttgggcattt taccaccatc aaatgatatc gagtttagat ataaactcaa       300
     acatctgtga acatatggtt ggaaaagagg acagctgatg acgttacaag actgcagatt       360
     accagtccct ttggacagac gcttgaatgg tagtggaacg gaggaggcag cagatccagt       420
     tgtgttcact agtgcttgct tgtgcatcta accaatctag tgatggtttc cagatgctat       480
     ttcagactct gcaagggaaa aacaaaaaca aaaacaaaac tagtatctag aagcaccata       540
     atttgtttcc atttgaataa gtcagtgaat attcatagaa ccagggactg aagattattt       600
     tcagaggaaa aagttttttt agggtggaga tattccaatt ggcaaacgtt tttctttttt       660
     tcctaaggaa agagctttat ttttataaaa gccatccaac tattatgaaa aaggtacaaa       720
     ttcacgtttt agtgaaaccg catgattttt gaccagatgt ggggtgcttc gggtgtaaat       780
     gtgtacgata aaggatattt tgaaggacac atcacgcctt gtaataaaaa ggaaatgttt       840
     ttcaggtttc cctctaccca gaatt                                             865
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