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EBI DbfetchID AF017454; SV 1; linear; genomic DNA; STD; PRO; 2372 BP. XX AC AF017454; XX DT 04-DEC-1997 (Rel. 53, Created) DT 15-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Thermococcus sp. Rt3 amylase (amy) gene, complete cds. XX KW . XX OS Thermococcus sp. Rt3 OC Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; OC Thermococcus. XX RN [1] RP 1-2372 RX DOI; 10.1046/j.1365-2672.1999.00642.x RX PUBMED; 10030014. RA Jones R.A., Jermiin L.S., Easteal S., Patel B.K., Beacham I.R.; RT "Amylase and 16S rRNA genes from a hyperthermophilic archaebacterium"; RL J. Appl. Microbiol. 86(1):93-107(1999). XX RN [2] RP 1-2372 RA Jones R.A., Patel B., Beacham I.R.; RT ; RL Submitted (06-AUG-1997) to the EMBL/GenBank/DDBJ databases. RL School of Biomolec. and Biomedical Science, Griffith University, Nathan, RL Brisbane, Qld. 4111, Australia XX FH Key Location/Qualifiers FH FT source 1..2372 FT /organism="Thermococcus sp. Rt3" FT /strain="Rt3" FT /mol_type="genomic DNA" FT /db_xref="taxon:65421" FT CDS 372..1781 FT /codon_start=1 FT /transl_table=11 FT /gene="amy" FT /product="amylase" FT /EC_number="3.2.1.1" FT /db_xref="GOA:O50200" FT /db_xref="HSSP:1MXG" FT /db_xref="InterPro:IPR013781" FT /db_xref="UniProtKB/TrEMBL:O50200" FT /protein_id="AAB87860.1" FT /translation="MSAKKLLALLFVLAVLVGVAVIPARVGIAPVSAGATSRPSLEEGG FT VIMQAFYWDVPAGGIWWDTIRSKIPDWASAGISAIWIPPASKGMSGAYSMGYDPYDFFD FT LGEYYQKGTVETRFGSKQELINMINTAHSYGIKVIADIVINHRAGGDLEWNPFTNSYTW FT TDFSKVASGKYTANYLDFHPNEVKCCDEGTFGGFPDIAHEKSWDQYWLWASQKSYAAYL FT RSIGIDAWRFDYVKGYGAWVVKDWLKWWALAVGEYWDTNVDALLNWAYSSGAKVFDFPL FT YYKMDEAFDNKNIPALVSALQNGQTVVSRDPFKAVTFVANHDTDIIWNKYPAYAFILTY FT EGQPVIFYRDYEEWLNKDRLKNLIWIHNNLAGGSTSIVYYDNDELIFVRNGYGNKPGLI FT TYINLGSSKVGRWVYVPKFAGSCIHEYTGNLGGWVDKYVGSNGWVYLEAPAHDPAKGQY FT GYSVWSYCGVG" XX SQ Sequence 2372 BP; 583 A; 598 C; 647 G; 544 T; 0 other; gatcgggaaa ggcttgagaa gattgcgagg gaagttttgg acgagatcga gattaaatca 60 catccgataa taaggaggat ttcggaagcc aacgttgaac tcacggagat agagctcttc 120 cacctcctga acatgctcgt gttcctccag agctgcgagc tctgcgagaa ggcccgggaa 180 gtcaaagccc tcgtcgaatt ttaaactctc tattctgaag ggccctgttc cgggaggtta 240 catcttcgag ggggagtctg atgtcctttt gtgttcctta atgaacgttc gcagtaaagc 300 ttaaatattt caccatcggt gatacaagcg agagtcagtg cactgccaca tgcacgtgga 360 gggtggtgta catgagtgct aaaaaactgc ttgcgctgct gttcgttctt gccgtccttg 420 ttggcgtggc ggtaatcccg gccagggttg gtatagcccc agtctcggcc ggtgcaacca 480 gccgtcccag cctcgaagaa ggcggggtca taatgcaggc attctactgg gacgtcccag 540 ctggcggaat ctggtgggat acaataagga gcaagatacc ggactgggcc agcgctggaa 600 tctcagctat atggattcct cccgcgagca agggtatgag tggtgcctat tccatgggct 660 acgaccccta cgacttcttc gacctcggcg agtactacca gaagggaacc gttgagaccc 720 gctttggctc aaagcaggag ctaattaaca tgataaacac cgcccactcc tatggaatca 780 aggtcatagc ggacatagtc ataaaccacc gcgccggcgg cgacttggag tggaacccct 840 tcacaaacag ctacacctgg actgacttct caaaggttgc ctccggcaag tacaccgcca 900 actacctcga ctttcacccc aacgaggtca aatgctgtga tgaaggcacc ttcggagggt 960 tcccggacat agcccatgag aagagctggg accagtactg gctctgggcc agccagaaga 1020 gctatgctgc ctacctgagg agcataggca tcgatgcgtg gcgcttcgac tacgtcaagg 1080 gttacggggc gtgggtggtc aaggactggc tgaaatggtg ggcgctggcc gtcggtgagt 1140 actgggatac aaacgttgat gccctcctta actgggccta ctcaagcggt gccaaggtct 1200 tcgacttccc gctctactac aagatggacg aggcctttga caacaagaac atcccagccc 1260 tggtttcggc ccttcagaac ggtcagacag tcgtttcccg cgaccccttc aaggctgtaa 1320 ccttcgtcgc caaccacgac accgacataa tctggaacaa gtatccggct tatgccttca 1380 tcctcaccta cgagggtcag ccggttatat tctaccgcga ctacgaggag tggctcaaca 1440 aggacagact caagaacctc atctggatac acaacaatct cgccggcggg agcacgagca 1500 tagtctacta cgataacgac gagctcatct tcgtcaggaa cggctacggg aacaagccag 1560 gccttataac ctacatcaac ctcggctcca gcaaggtcgg aaggtgggtc tacgttccaa 1620 agttcgcggg ttcgtgcatc cacgagtaca cgggcaacct cggcggctgg gttgacaagt 1680 acgttggctc aaacggatgg gtctacctcg aggcccctgc ccacgaccct gccaagggcc 1740 agtacggcta ctccgtctgg agctactgcg gggttggttg aaccatgctc atttaatatt 1800 tttctcaggg ccaggcgcct tttcaactct cgctgtctgc acaacagata atagcagggc 1860 gtttgggggc tattttgatg tcgtgtaaac ctcttgcttt tcatgcattc ctgtgagagt 1920 tccgaggctg acttggtcat ttaccagcgt aggtctatta aagttttagt gtagtaagat 1980 agaaaaattt aaaagttgtt ggagcgctta aatatatcaa ctgctggcag tattgggggc 2040 gaaatagttg aagtggaaaa aactcgtggt aatcgtatcc cttctgctcc tcctcgggag 2100 tcttggagtg tacgtcaggg gctctccgat gggcggtgtt aaaatcgacg ttgtagatgc 2160 aaacggaaag gcaatcacgg actatgggga ggtgtattac tccgtttgga ctttcgatga 2220 aaacgggagc tttgaggttt taaaacgggg ggttcttaaa ggagggttgt tcttttcaag 2280 gaacacgata gaactctcaa aagctgaaac ggaaaagctt agaaaaatgg cccaaaaaat 2340 gtactccaaa acggccttcg tcggcatcga tc 2372 // |
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