EBI Dbfetch

ID   AF012343; SV 1; linear; mRNA; STD; PLN; 1888 BP.
XX
AC   AF012343; AF012345;
XX
DT   22-OCT-1998 (Rel. 57, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 4)
XX
DE   Hordeum vulgare beta-amylase mRNA, complete cds.
XX
KW   .
XX
OS   Hordeum vulgare
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP clade;
OC   Pooideae; Triticeae; Hordeum.
XX
RN   [1]
RP   1-1888
RX   AGRICOLA; IND23262956.
RA   Jung W., Skadsen R.W., Peterson D.M.;
RT   "Characterization of a novel barley beta-amylase gene expressed only during
RT   early grain development";
RL   Seed Sci. Res. 11(4):325-333(2001).
XX
RN   [2]
RP   1-1888
RA   Jung W., Skadsen R.W., Peterson D.M.;
RT   ;
RL   Submitted (02-JUL-1997) to the EMBL/GenBank/DDBJ databases.
RL   Agronomy, University of Wisconsin, Madison, 501 N. Walnut, Madison, WI
RL   53705, USA
XX
DR   GrainGenes; AF012343; AF012343.
XX
CC   On Jan 2, 2002 this sequence version replaced gi:2281702.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1888
FT                   /organism="Hordeum vulgare"
FT                   /cultivar="Klages"
FT                   /mol_type="mRNA"
FT                   /haplotype="2n"
FT                   /clone="seg85-1"
FT                   /tissue_type="embryonic endosperm and maternal sporophyte"
FT                   /db_xref="taxon:4513"
FT   CDS             48..1565
FT                   /codon_start=1
FT                   /product="beta-amylase"
FT                   /EC_number="3.2.1.2"
FT                   /note="1,4-alpha-D-glucanmaltohydrolase"
FT                   /db_xref="GOA:O23978"
FT                   /db_xref="HSSP:1B1Y"
FT                   /db_xref="InterPro:IPR013781"
FT                   /db_xref="UniProtKB/TrEMBL:O23978"
FT                   /protein_id="AAC64904.1"
FT                   /translation="MAGNMLANYVQVYVMLPLDVVSVDNKFEKGDEIRAHVKKLTEAGV
FT                   DGVMIYFWWGLVEGIGPKAYHWTPYNHVFYLVHDARLQLQAIMSFHQCGGNVGDLFNIP
FT                   IPQWVRDVGATDPDIFYTNRRGTRNIDYLTLGVDDQPLFHGRTAVQMYHDYMASFRENM
FT                   KKFLDAGTIVDIEVGLGPAGEMRYPSYPQSQGWVFPGIGEFICYDKYLEADFKAAAAKA
FT                   GHPEWELPDDAGEYNDTPEKTQFFKENGTYLTEKGKFFLSWYSNKLIKHGDKILDEANK
FT                   VFLGCRVHLAIKISGIHWWYRVPNHAAELTAGYYNLDDRDGYRTIARMLTRHHASMNFT
FT                   CAEMRDSEQSEEAKSAPEELVQQVLSAGWREGLHVACENALSRYDATAYNTILRNARPK
FT                   GINENGPPEHKLFGFTYLRLSNELLKGQNYATFQTFVEKMHANLAHNPSVDPVAPLEKS
FT                   KPEMPIELILKAAQPKLEPFPFDKNTDLPVKNHTDVVDEALLAPVAV"
XX
SQ   Sequence 1888 BP; 527 A; 449 C; 489 G; 423 T; 0 other;
     gttcagtgag tgagcacgca agccagtgtt tgtagccagc agccacaatg gccgggaaca        60
     tgctagccaa ctatgtccaa gtctacgtca tgctcccgct ggatgtcgtg agcgtcgaca       120
     acaagttcga gaagggcgac gagatcaggg cgcacgtgaa gaagctgacg gaggctggcg       180
     tggacggcgt catgatatac ttctggtggg ggctggtgga aggcattggc cccaaggcct       240
     accactggac cccctacaat catgtcttct acctggtgca cgatgccagg ctccagctgc       300
     aggccatcat gtcgttccac cagtgcggtg gcaacgtcgg cgacttattc aacatcccca       360
     tcccacagtg ggtgcgggat gtcggcgcta ccgaccccga cattttctac acgaaccgca       420
     gagggacgag gaacatcgat tacctcaccc ttggagtgga tgaccaacct ctcttccatg       480
     gaagaactgc cgtccaaatg tatcatgatt acatggcgag cttcagggaa aacatgaaaa       540
     agtttttgga tgccggtacc atcgtggaca ttgaagtggg acttggcccg gctggagaga       600
     tgaggtaccc atcctatcct cagagccagg gatgggtctt cccaggcatc ggagaattca       660
     tctgctatga taagtacctg gaagcagact tcaaagcagc agcagcgaag gctggccatc       720
     ctgagtggga gttacctgac gatgctggag agtacaatga cacccctgag aaaacccaat       780
     tcttcaagga gaacggaaca tacctcactg agaaggggaa gtttttcctc tcatggtact       840
     ccaacaaact gatcaagcat ggtgacaaga tcttggacga agcaaacaag gtcttcttgg       900
     gatgcagggt gcacctggca atcaaaatct ctggcattca ctggtggtac agggttccaa       960
     accatgcagc cgagctcaca gctgggtact acaacttaga tgacagagac ggctacagaa      1020
     caatagcacg catgctcaca aggcatcatg ctagcatgaa cttcacttgt gcagagatga      1080
     gggactctga gcaaagcgaa gaggcgaaga gcgcaccaga agaactagtc caacaggtgc      1140
     tgagtgctgg atggagagag ggcttacatg tggcgtgtga aaacgcactc agtcgatatg      1200
     atgccactgc ttacaacaca atactcagga atgcgaggcc gaaaggtatc aacgagaatg      1260
     gccctcctga gcacaaactg tttggattca cctacctccg gttatcgaat gagctactaa      1320
     agggacagaa ctacgccact ttccaaactt ttgtcgagaa aatgcatgct aacctggctc      1380
     ataacccaag tgttgatcca gtggcgcctt tggaaaaatc aaagccagaa atgccaattg      1440
     aacttatcct gaaagcagcg cagccaaaac tggagccatt cccttttgat aaaaacaccg      1500
     acctgccagt taaaaatcac actgatgtcg tggatgaggc gctccttgcc cctgtggctg      1560
     tgtagaaatc tttctctgcc ttcgtaaaat aatgtgcatc actgatgcag tctatgagag      1620
     ggtcaagagg tgctttgtga gaattgaggt gcacaggaaa taagccgcca aggataaata      1680
     aactctatgc tacaatgtta tagccatata gtgtggcaat attattgtac tggtaatcat      1740
     gaggttgtat gtttttccga tgagctgcgg ttcatcggaa ctccacccca ctttgttgtg      1800
     agtatttgag agtgaacaaa taaaacagtt tgtgcttata acttaaatga tcgtgaagtt      1860
     ttcagcagta taaatggaac tgccgttc                                         1888
//