EBI Dbfetch

ID   AF008596; SV 1; linear; genomic DNA; STD; PRO; 1710 BP.
XX
AC   AF008596;
XX
DT   16-OCT-1997 (Rel. 52, Created)
DT   05-JUL-1999 (Rel. 60, Last updated, Version 2)
XX
DE   Helicobacter pylori alpha1,3-fucosyltransferase (fucT) gene, complete cds.
XX
KW   .
XX
OS   Helicobacter pylori
OC   Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales;
OC   Helicobacteraceae; Helicobacter.
XX
RN   [1]
RP   1-1710
RX   DOI; 10.1074/jbc.272.34.21357
RX   PUBMED; 9261149.
RA   Ge Z., Chan N.W.C., Palcic M.M., Taylor D.E.;
RT   "Cloning and heterologous expression of an alpha1,3-fucosyltransferase gene
RT   from the gastric pathogen Helicobacter pylori";
RL   J. Biol. Chem. 272(34):21357-21363(1997).
XX
RN   [2]
RP   1-1710
RA   Ge Z., Chan N.W.C., Palcic M.M., Taylor D.E.;
RT   ;
RL   Submitted (16-JUN-1997) to the EMBL/GenBank/DDBJ databases.
RL   Medical Microbiology and Immunology, University of Alberta, Edmonton,
RL   Alberta T6G 2H7, Canada
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1710
FT                   /organism="Helicobacter pylori"
FT                   /strain="NCTC 11639"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:210"
FT   gene            <145..>1581
FT                   /gene="fucT"
FT   CDS             145..1581
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="fucT"
FT                   /product="alpha1,3-fucosyltransferase"
FT                   /function="catalyses final step of Lewis X biosynthesis"
FT                   /note="similar to mammalian FUT"
FT                   /db_xref="GOA:O30511"
FT                   /db_xref="InterPro:IPR016646"
FT                   /db_xref="PDB:2NZW"
FT                   /db_xref="UniProtKB/TrEMBL:O30511"
FT                   /protein_id="AAB81031.1"
FT                   /translation="MFQPLLDAYVESASIEKMASKSPPPLKIAVANWWGDEEIKEFKNS
FT                   VLYFILSQRYTITLHQNPNEFSDLVFGNPLGSARKILSYQNAKRVFYTGENESPNFNLF
FT                   DYAIGFDELDFNDRYLRMPLYYDRLHHKAESVNDTTAPYKLKDNSLYALKKPSHCFKEK
FT                   HPNLCAVVNDESDPLKRGFASFVASNPNAPIRNAFYDALNSIEPVTGGGSVRNTLGYNV
FT                   KNKNEFLSQYKFNLCFENTQGYGYVTEKIIDAYFSHTIPIYWGSPSVAKDFNPKSFVNV
FT                   HDFKNFDEAIDYIKYLHTHKNAYLDMLYENPLNTLDGKAYFYQNLSFKKILAFFKTILE
FT                   NDTIYHDNPFIFCRDLNEPLVTIDDLRVNYDDLRVNYDDLRINYDDLRVNYDDLRINYD
FT                   DLRVNYDDLRVNYDDLRINYDDLRVNYDDLRVNYERLLSKATPLLELSQNTTSKIYRKA
FT                   YQKSLPLLRAIRRWVKKLGL"
XX
SQ   Sequence 1710 BP; 530 A; 325 C; 318 G; 537 T; 0 other;
     tctggcttgc acagctatgc cgcaggcgat cccttgccga tccctacttt cttatacttt        60
     ttggtagcga taccttttgc tcttgtgatc ttggcgtatt ttaaacgcca tttgagtttg       120
     cctaaattgg tttaaaggat aaccatgttc caacccctat tagacgctta tgtagaaagc       180
     gcttccattg aaaaaatggc ctctaaatct cccccccccc taaaaatcgc tgtggcgaat       240
     tggtggggag atgaagaaat taaagaattt aaaaatagcg ttctttattt tatcctaagc       300
     caacgctaca caatcaccct ccaccaaaac cccaatgaat tttcagatct cgtctttggt       360
     aacccccttg gatcggccag aaaaatctta tcctatcaaa acgctaaacg agtgttttac       420
     accggtgaaa acgaatcgcc taatttcaac ctctttgatt acgccatagg ctttgatgaa       480
     ttggatttta atgatcgtta tttgagaatg cctttatatt atgataggct acaccataaa       540
     gccgagagcg tgaatgacac cactgcgccc tacaaactca aagataacag cctttatgct       600
     ttaaaaaaac cctcccattg ttttaaagaa aaacacccca atttatgcgc agtagtgaat       660
     gatgagagcg atcctttgaa aagagggttt gcgagctttg tcgcgagcaa ccctaacgcc       720
     cctataagga acgctttcta tgacgctcta aattctattg aaccagttac tgggggaggg       780
     agcgtgagaa acactttagg ctataacgtc aaaaacaaaa acgagttttt aagccaatac       840
     aagttcaacc tgtgttttga aaacactcaa ggctatggct atgtaactga aaaaatcatt       900
     gacgcttact ttagccatac cattcctatt tattggggga gtcctagcgt ggcgaaagat       960
     tttaacccta aaagttttgt gaatgtgcat gatttcaaaa actttgatga agcgattgac      1020
     tatatcaaat acttgcacac gcacaaaaac gcttatttag acatgcttta tgaaaaccct      1080
     ttgaacaccc ttgatgggaa agcttacttt taccaaaatt tgagttttaa aaagatccta      1140
     gcttttttta aaacgatttt agaaaacgat acgatttatc acgataaccc tttcattttc      1200
     tgtcgtgatt tgaatgagcc tttagtaact attgatgatt tgagggttaa ttatgatgat      1260
     ttgagggtta attatgatga tttgagaatt aattatgatg atttgagggt taattatgat      1320
     gatttgagaa ttaattatga tgatttgagg gttaattatg atgatttgag ggttaattat      1380
     gatgatttga gaattaatta tgatgatttg agggttaatt atgatgattt gagggttaat      1440
     tatgagcgcc tcttatcaaa agctacccct cttttggaat tatcccaaaa caccacttct      1500
     aaaatctatc gcaaagctta ccaaaaatcc ttacctttgt tgcgcgccat aaggagatgg      1560
     gttaaaaaat tgggtttgta aaattggggg taaactaaac cccttgcgct atcatcgcag      1620
     acgctacttt tctaaaacca gcgatattag cccctaaaac aaaattagta gggtctttaa      1680
     actctttagc ggtttgagag acattcttat                                       1710
//