EBI Dbfetch

ID   AF005221; SV 1; linear; genomic DNA; STD; PRO; 1729 BP.
XX
AC   AF005221;
XX
DT   06-OCT-1998 (Rel. 57, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 2)
XX
DE   Pseudomonas syringae hrp-secreted protein HrpW (hrpW) gene, complete cds.
XX
KW   .
XX
OS   Pseudomonas syringae
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
OC   Pseudomonadaceae; Pseudomonas.
XX
RN   [1]
RP   1-1729
RX   PUBMED; 9748456.
RA   Charkowski A.O., Alfano J.R., Preston G., Yuan J., He S.Y., Collmer A.;
RT   "The Pseudomonas syringae pv. tomato HrpW protein has domains similar to
RT   harpins and pectate lyases and can elicit the plant hypersensitive response
RT   and bind to pectate";
RL   J. Bacteriol. 180(19):5211-5217(1998).
XX
RN   [2]
RP   1-1729
RA   Charkowski A.O., Conlin A.K., Collmer A.;
RT   ;
RL   Submitted (23-MAY-1997) to the EMBL/GenBank/DDBJ databases.
RL   Plant Pathology, Cornell University, Ithaca, NY 14853, USA
XX
DR   StrainInfo; 493307; DC3000.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1729
FT                   /organism="Pseudomonas syringae"
FT                   /strain="DC3000"
FT                   /mol_type="genomic DNA"
FT                   /note="pathovar tomato"
FT                   /note="pathovar: Lycopersicon esculentum"
FT                   /db_xref="taxon:317"
FT   promoter        268..292
FT                   /gene="hrpW"
FT                   /note="hrp box"
FT   RBS             406..409
FT                   /gene="hrpW"
FT   CDS             419..1693
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="hrpW"
FT                   /product="HrpW"
FT                   /note="harpin; hrp-secreted protein"
FT                   /db_xref="GOA:O87264"
FT                   /db_xref="HSSP:1EE6"
FT                   /db_xref="InterPro:IPR004898"
FT                   /db_xref="InterPro:IPR011050"
FT                   /db_xref="InterPro:IPR012334"
FT                   /db_xref="UniProtKB/TrEMBL:O87264"
FT                   /protein_id="AAC62526.1"
FT                   /translation="MSIGITPRPQQTTTPLDFSALSGKSPQPNTFGEQNTQQAIDPSAL
FT                   LFGSDTQKDVNFGTPDSTVQNPQDASKPNDSQSNIAKLISALIMSLLQMLTNSNKKQDT
FT                   NQEQPDSQAPFQNNGGLGTPSADSGGGGTPDATGGGGGDTPSATGGGGGDTPTATGGGG
FT                   SGGGGTPTATGGGSGGTPTATGGGEGGVTPQITPQLANPNRTSGTGSVSDTAGSTEQAG
FT                   KINVVKDTIKVGAGEVFDGHGATFTADKSMGNGDQGENQKPMFELAEGATLKNVNLGEN
FT                   EVDGIHVKAKNAQEVTIDNVHAQNVGEDLITVKGEGGAAVTNLNIKNSSAKGADDKVVQ
FT                   LNANTHLKIDNFKADDFGTMVRTNGGKQFDDMSIELNGIEANHGKFALVKSDSDDLKLA
FT                   TGNIAMTDVKHAYDKTQASTQHTEL"
XX
SQ   Sequence 1729 BP; 464 A; 484 C; 486 G; 295 T; 0 other;
     tccacttcgc tgattttgaa attggcagat tcatagaaac gttcaggtgt ggaaatcagg        60
     ctgagtgcgc agatttcgtt gataagggtg tggtactggt cattgttggt catttcaagg       120
     cctctgagtg cggtgcggag caataccagt cttcctgctg gcgtgtgcac actgagtcgc       180
     aggcataggc atttcagttc cttgcgttgg ttgggcatat aaaaaaagga acttttaaaa       240
     acagtgcaat gagatgccgg caaaacggga accggtcgct gcgctttgcc actcacttcg       300
     agcaagctca accccaaaca tccacatccc tatcgaacgg acagcgatac ggccacttgc       360
     tctggtaaac cctggagctg gcgtcggtcc aattgcccac ttagcgaggt aacgcagcat       420
     gagcatcggc atcacacccc ggccgcaaca gaccaccacg ccactcgatt tttcggcgct       480
     aagcggcaag agtcctcaac caaacacgtt cggcgagcag aacactcagc aagcgatcga       540
     cccgagtgca ctgttgttcg gcagcgacac acagaaagac gtcaacttcg gcacgcccga       600
     cagcaccgtc cagaatccgc aggacgccag caagcccaac gacagccagt ccaacatcgc       660
     taaattgatc agtgcattga tcatgtcgtt gctgcagatg ctcaccaact ccaataaaaa       720
     gcaggacacc aatcaggaac agcctgatag ccaggctcct ttccagaaca acggcgggct       780
     cggtacaccg tcggccgata gcgggggcgg cggtacaccg gatgcgacag gtggcggcgg       840
     cggtgatacg ccaagcgcaa caggcggtgg cggcggtgat actccgaccg caacaggcgg       900
     tggcggcagc ggtggcggcg gcacacccac tgcaacaggt ggcggcagcg gtggcacacc       960
     cactgcaaca ggcggtggcg agggtggcgt aacaccgcaa atcactccgc agttggccaa      1020
     ccctaaccgt acctcaggta ctggctcggt gtcggacacc gcaggttcta ccgagcaagc      1080
     cggcaagatc aatgtggtga aagacaccat caaggtcggc gctggcgaag tctttgacgg      1140
     ccacggcgca accttcactg ccgacaaatc tatgggtaac ggagaccagg gcgaaaatca      1200
     gaagcccatg ttcgagctgg ctgaaggcgc tacgttgaag aatgtgaacc tgggtgagaa      1260
     cgaggtcgat ggcatccacg tgaaagccaa aaacgctcag gaagtcacca ttgacaacgt      1320
     gcatgcccag aacgtcggtg aagacctgat tacggtcaaa ggcgagggag gcgcagcggt      1380
     cactaatctg aacatcaaga acagcagtgc caaaggtgca gacgacaagg ttgtccagct      1440
     caacgccaac actcacttga aaatcgacaa cttcaaggcc gacgatttcg gcacgatggt      1500
     tcgcaccaac ggtggcaagc agtttgatga catgagcatc gagctgaacg gcatcgaagc      1560
     taaccacggc aagttcgccc tggtgaaaag cgacagtgac gatctgaagc tggcaacggg      1620
     caacatcgcc atgaccgacg tcaaacacgc ctacgataaa acccaggcat cgacccaaca      1680
     caccgagctt tgaatccaga caagtagctt gaaaaaaggg ggtggactc                  1729
//