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EBI DbfetchID AF004712; SV 1; linear; genomic DNA; STD; PRO; 2423 BP. XX AC AF004712; XX DT 21-JUN-1997 (Rel. 52, Created) DT 03-MAR-2000 (Rel. 62, Last updated, Version 4) XX DE Haemophilus ducreyi ribosomal protein L31 homolog, losA and DE D-glycero-D-manno-heptosyl transferase (losB) genes, complete cds. XX KW . XX OS Haemophilus ducreyi OC Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; OC Pasteurellaceae; Haemophilus. XX RN [1] RP 1-2423 RX PUBMED; 9260947. RA Gibson B.W., Campagnari A.A., Melaugh W., Phillips N.J., Apicella M.A., RA Grass S., Wang J., Palmer K.L., Munson R.S.Jr.; RT "Characterization of a transposon Tn916-generated mutant of Haemophilus RT ducreyi 35000 defective in lipooligosaccharide biosynthesis"; RL J. Bacteriol. 179(16):5062-5071(1997). XX RN [2] RP 1-2423 RA Gibson B.W., Campagnari A.A., Melaugh W., Phillips N.J., Apicella M.A., RA Grass S., Wang J., Palmer K.L., Munson R.S.Jr.; RT ; RL Submitted (19-MAY-1997) to the EMBL/GenBank/DDBJ databases. RL Molecular Medicine, Children's Hospital Research Foundation, 700 Children's RL Drive, Columbus, OH 43205, USA XX CC sequence independently determined by Stevens, M.K., et al, CC Infection and Immunity, 65, 651-660; see GenBank Accession Number CC U58147. XX FH Key Location/Qualifiers FH FT source 1..2423 FT /organism="Haemophilus ducreyi" FT /strain="35000" FT /mol_type="genomic DNA" FT /db_xref="taxon:730" FT CDS 168..380 FT /codon_start=1 FT /transl_table=11 FT /product="ribosomal protein L31 homolog" FT /db_xref="GOA:Q59450" FT /db_xref="InterPro:IPR002150" FT /db_xref="UniProtKB/Swiss-Prot:Q59450" FT /protein_id="AAC45591.1" FT /translation="MKQGIHPEYKEITATCSCGNVIKTRSTVEKNLNLDVCGNCHPFYT FT GKQRVVDTGGRVERFNKRFNIPSTK" FT CDS 466..1140 FT /codon_start=1 FT /transl_table=11 FT /gene="losA" FT /product="LosA" FT /db_xref="GOA:Q47960" FT /db_xref="InterPro:IPR002654" FT /db_xref="UniProtKB/TrEMBL:Q47960" FT /protein_id="AAC45592.1" FT /translation="MDEFPPIFIISLKDSPRKNIIAERLNALGLSFNFFDAIYGKELSK FT KQLSEINYDFYIQKFNARKRLTLGEIGCAISHIKLYEYIVKNNINEAIILEDDAIVSIY FT FKDIICDALKKISCKYEILFLDHGKAKIFPFTRSLVERYRLAKYISPSKKSKRIIIRTT FT AYIITLNGARKLLNYAYPIRMPSDYLTGTLQLTGINAYGIEPPCVFGGPISEIDQIEDR FT YC" FT CDS 1141..2172 FT /codon_start=1 FT /transl_table=11 FT /gene="losB" FT /product="D-glycero-D-manno-heptosyl transferase" FT /db_xref="GOA:Q47961" FT /db_xref="UniProtKB/TrEMBL:Q47961" FT /protein_id="AAC45593.1" FT /translation="MNLKEKLRKLRIAFGKLVLDRKISFTKLRLPPKKILFLRQDGKIG FT DYIVSSFVFREIKKQLPNIEIGVICSDKNAYLFNKNAYIDHCYIVRTRNILDYLKCGMK FT LANQKYDLVIDPTIALRNRDLLLLRVINAKHYIGYEKTNYQLFDFNIKNEKKHISTVYK FT RALELIGLNHIDISYDIPLNKDSHERIKIYLSESCLDSFIALNLFGASSTRSFNDNKIY FT ELLEYLKKNTNKPILLLTFPAIARKLKKIACHFSEVFIYEHTKTVFDTIELIRFADLVI FT SPDTSIVHIAVGLNKKLIAFYSLDEQNFIHWQPNNLVETHILRFEHNINEINISEIQAK FT WLN" XX SQ Sequence 2423 BP; 881 A; 299 C; 385 G; 858 T; 0 other; gatctttatt ctaaaataaa atagaatttg ctttcttttg gcgttgagta atttactcaa 60 catattttta gttacatatg gtacttatca gcggatgtca ttaaataata taaatcattt 120 aactgcaaca agataagtgg cgatatggct tcatcagagg ttctccaatg aaacaaggta 180 ttcacccaga atataaagaa attacggcaa catgttcttg cggtaatgta attaaaacac 240 gctcaacagt agagaaaaat ttaaatttag acgtatgtgg taattgccac ccattctata 300 caggcaaaca gcgtgtagtt gacaccggcg gtcgtgttga acgtttcaat aaacgtttta 360 atatcccgag cactaaataa ttagtgtttt gtcaataaaa ccctgcaata gcagggtttt 420 attgtaataa gtaaaaattt ttcttattaa ataaagtgaa ataatatgga tgaattccct 480 cctattttta ttattagttt aaaagattca cctaggaaaa atattattgc agaacgttta 540 aatgcattag gattatcttt taattttttt gatgcgattt atggcaaaga actttctaaa 600 aaacaattgt cggaaataaa ttatgatttt tatatacaaa aatttaatgc aagaaagcgc 660 cttactttag gagaaattgg ttgtgcaatt agtcatatta aattgtatga atatattgta 720 aaaaataata ttaacgaggc aattatttta gaggatgatg ctatagtatc tatttatttt 780 aaagatatta tatgtgatgc attaaaaaag atttcttgta aatatgagat attattttta 840 gatcatggta aggctaaaat attccctttt actaggagtt tagttgaaag atatagatta 900 gctaaatata tttctccatc gaaaaaatct aaaagaatta ttattcgtac tacagcatat 960 attattacgt taaatggtgc tcgtaagcta ctaaattatg cgtatcctat tcgtatgcca 1020 tcagattatt taactgggac acttcaatta acgggaataa atgcttatgg tattgagccc 1080 ccttgcgttt ttggtgggcc aatttctgaa attgatcaaa tagaagatag atattgttaa 1140 atgaatctta aagaaaaatt aagaaaatta cgtatagcat ttggtaaatt ggttttagat 1200 agaaaaatat catttactaa attaaggttg cctcctaaaa aaattctttt tcttaggcaa 1260 gatggtaaga taggtgatta tattgttagt tcttttgttt ttcgtgaaat aaagaagcaa 1320 ttacctaata ttgagatagg cgttatttgt tcggataaaa atgcttattt atttaataaa 1380 aatgcttaca tagaccattg ttatattgtt cgaacaagga atatattaga ctatttgaaa 1440 tgtggtatga agttagccaa tcagaaatat gatttagtta ttgatcctac tatagcatta 1500 cgtaataggg atttattgct tttgagagtt attaatgcta aacattatat aggttatgag 1560 aaaactaatt atcaattgtt tgattttaat ataaagaatg agaaaaagca tatttcaaca 1620 gtctataaaa gagccttaga attaatagga ctaaaccata tagatataag ctatgatatt 1680 ccattaaaca aagacagtca tgaaagaata aaaatatatc tatctgagtc ttgtttagat 1740 agctttatcg cacttaattt atttggagct agttctacta ggtctttcaa tgataataag 1800 atatatgaat tgcttgaata tttgaagaaa aatacaaata aaccaatttt attgttaaca 1860 ttccctgcaa tagctagaaa attaaaaaaa attgcttgtc atttttcgga agtatttatc 1920 tatgaacata cgaaaacagt gtttgatact atagaattaa tacgttttgc tgatttggtt 1980 atttcacctg atacttctat tgtgcatatt gctgttggac ttaataaaaa attaattgca 2040 ttttatagtc ttgatgaaca aaatttcatt cactggcaac caaataattt agttgaaaca 2100 catattttgc gttttgaaca taacataaat gaaataaata tttcagaaat tcaagcaaag 2160 tggttaaatt aataatacgt tttgaattat ttaaatactg cccaaatagg ggcatgatca 2220 gagggttttt ccatagctct gatttctaaa tcaattcctg tttctacaca atggtttgct 2280 agtgttgttg aagctaaaat taagtcaatt cgtaacccac ggttgtcatt aaaaccttta 2340 gagcgataat caaaccatga gaattgatca gttgtagttg gatgcattgc acggaaagta 2400 tctactaaac catagtgata taa 2423 // |
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