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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AF004522; SV 1; linear; mRNA; STD; INV; 1046 BP.
XX
AC   AF004522;
XX
DT   13-AUG-1997 (Rel. 52, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 5)
XX
DE   Globodera rostochiensis glyceraldehyde-3-phosphate-dehydrogenase (gpd-1)
DE   mRNA, partial cds.
XX
KW   .
XX
OS   Globodera rostochiensis
OC   Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina;
OC   Tylenchoidea; Heteroderidae; Heteroderinae; Globodera.
XX
RN   [1]
RP   1-1046
RX   DOI; 10.1016/S0166-6851(98)00108-X
RX   PUBMED; 9851607.
RA   Qin L., Smant G., Stokkermans J., Bakker J., Schots A., Helder J.;
RT   "Cloning of a trans-spliced glyceraldehyde-3-phosphate-dehydrogenase gene
RT   from the potato cyst nematode Globodera rostochiensis and expression of its
RT   putative promoter region in Caenorhabditis elegans";
RL   Mol. Biochem. Parasitol. 96(1-2):59-67(1998).
XX
RN   [2]
RP   1-1046
RA   Smant G., Stokkermans J.P.W.G.;
RT   ;
RL   Submitted (19-MAY-1997) to the EMBL/GenBank/DDBJ databases.
RL   Nematology, Wageningen Agricultural University, Binnenhaven 10, Wageningen
RL   6709 PD, The Netherlands
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1046
FT                   /organism="Globodera rostochiensis"
FT                   /strain="Ro1"
FT                   /isolate="Mierenbos"
FT                   /mol_type="mRNA"
FT                   /dev_stage="second stage juvenile"
FT                   /db_xref="taxon:31243"
FT   CDS             75..>1046
FT                   /codon_start=1
FT                   /gene="gpd-1"
FT                   /product="glyceraldehyde-3-phosphate-dehydrogenase"
FT                   /EC_number="1.2.1.12"
FT                   /note="GPD-1"
FT                   /db_xref="GOA:O16027"
FT                   /db_xref="HSSP:3GPD"
FT                   /db_xref="InterPro:IPR006424"
FT                   /db_xref="UniProtKB/Swiss-Prot:O16027"
FT                   /protein_id="AAC79129.1"
FT                   /translation="MVKPKVGINGFGRIGRLALRAAVEKDTVQVVAINDPFIELDYMVY
FT                   MFNYDSTHGRFNGKISTSAGNLVVEKEGKATHTIKVFNLKDPAEIKWAEVGAEYVIEST
FT                   GVFTTIEKASAHLKGGAKKVVISAPSADAPMYVMGVNEDKYDPAKDNVISNASCTTNCL
FT                   APLAKVINDEFGIIEGLMTTVHAVTATQKTVDGPNGKQWRDGRGAAQNIIPASTGAAKA
FT                   VGKVIPELNGKLTGMAFRVPTPNVSVVDLTARLEKPASLDAIKAAVKKAAEGNLKGILG
FT                   YTEDQVVSTDFLGDSRSSIFDAGACISLNPHFVKLVSWYDNEF"
XX
SQ   Sequence 1046 BP; 251 A; 266 C; 308 G; 221 T; 0 other;
     gtttgagatt attgactttg catatttcca accaagttca tttgaccaat attttcctgc        60
     taaacatagc aaaaatggtg aaaccgaagg tcggcattaa tggctttgga cgcattgggc       120
     gcttggcgtt gcgcgctgcg gttgagaagg acaccgttca ggtggtggcg atcaatgacc       180
     cgttcatcga actcgactac atggtataca tgttcaacta cgactcgacc catggccgct       240
     tcaatggcaa aatttcgaca agcgccggca atttggtcgt tgagaaagag gggaaggcca       300
     cgcacaccat caaggtgttc aacctcaagg acccggccga gatcaaatgg gctgaggtgg       360
     gcgcggaata tgtgatcgag tccaccgggg tgttcactac cattgagaag gcttcggcac       420
     acttgaaggg gggcgccaag aaggtggtca tctctgctcc gtccgctgat gcaccgatgt       480
     acgtgatggg cgtcaacgag gacaaatatg acccggccaa ggacaacgtg attagcaacg       540
     cttcgtgcac caccaactgc cttgcgccgc tggccaaagt gatcaacgac gagtttggca       600
     tcatcgaagg gttgatgacc actgttcacg cagtaactgc cactcagaaa acggtggacg       660
     gaccgaatgg gaagcagtgg cgcgacgggc gtggcgccgc gcagaacatc atccctgcca       720
     gcaccggggc agccaaagca gtgggcaagg tcattcctga gctgaacggc aaattaaccg       780
     gcatggcatt ccgtgtgccg accccgaacg tttccgtcgt cgacctgacc gctcgtttgg       840
     agaagccggc ctcattggac gccatcaagg cggcggtgaa gaaggctgcc gaagggaatt       900
     tgaagggcat tttgggttac acagaggacc aggtggtgtc cacggacttt cttggagaca       960
     gtcgctcgtc gatcttcgac gctggggcgt gcatctcgtt gaacccgcac tttgtcaagt      1020
     tggtcagctg gtacgacaat gaattt                                           1046
//
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