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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AF001829; SV 1; linear; genomic DNA; STD; PRO; 1003 BP.
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AC   AF001829;
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DT   18-JUN-1997 (Rel. 52, Created)
DT   03-MAR-2000 (Rel. 62, Last updated, Version 5)
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DE   Lactococcus lactis lactis glycerol-3-phosphate dehydrogenase (glpD) gene,
DE   partial cds.
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KW   .
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OS   Lactococcus lactis subsp. lactis
OC   Bacteria; Firmicutes; Lactobacillales; Streptococcaceae; Lactococcus.
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RN   [1]
RP   1-1003
RX   PUBMED; 9212417.
RA   Erlandson K., Batt C.A.;
RT   "Strain-specific differentiation of lactococci in mixed starter culture
RT   populations using randomly amplified polymorphic DNA-derived probes";
RL   Appl. Environ. Microbiol. 63(7):2702-2707(1997).
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RN   [2]
RP   1-1003
RA   Erlandson K.A., Batt C.A.;
RT   ;
RL   Submitted (30-APR-1997) to the EMBL/GenBank/DDBJ databases.
RL   Food Science, Cornell University, 412 Stocking Hall, Ithaca, NY 14853, USA
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CC   OPX1-1.0b RAPD polymorphism.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1003
FT                   /organism="Lactococcus lactis subsp. lactis"
FT                   /sub_species="lactis"
FT                   /strain="210"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:1360"
FT   CDS             245..>1003
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="glpD"
FT                   /product="glycerol-3-phosphate dehydrogenase"
FT                   /note="putative, based on similarity to B. subtilis
FT                   glycerol-3-phosphate dehydrogenase"
FT                   /db_xref="GOA:Q9CG65"
FT                   /db_xref="InterPro:IPR006076"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q9CG65"
FT                   /protein_id="AAB63270.1"
FT                   /translation="MAFSKKTRQEAITKIQNEEMDLLVIGGGITGAGLTLQAAAAGMKV
FT                   AVLEMQDFSEGTSSRSTKLVHGGIRYLKNFDVEVVSDTVSERAVVQGIAPHIPKPDPML
FT                   LPIYDDEGKTTFDMFSVKIAMDLYDRLAGVDEDSPYANYTISPEEVLHREPLIKXKGLQ
FT                   GAGVYLDYRNXDARXVIDNIXKAVXDGXQXISKMKVIDFIXTDGQISGIRARDLLTDQV
FT                   IEVXAKLVINTSGPWVDKIRYLNFTRPIVPR"
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SQ   Sequence 1003 BP; 303 A; 200 C; 232 G; 258 T; 10 other;
     tctgggcacg aataatattt agtgaagcgt cacgaagcat ttgatattcg ttatctgaga        60
     gcgtttgact tggtgcgaaa acgattgagt cacctgtgtg aactccaact gggtcaaaat       120
     tttccatact cagatgcaag aagaacgtag agaagaactc tatgccggtt ggaaaaaagc       180
     cgtgaatgca acacgtgctt tcaaataata atcaatcaga cagtaatcta aaaggagaat       240
     agaaatggct ttttctaaaa aaacaagaca agaagcaatc acaaaaattc aaaatgaaga       300
     gatggattta ctcgttatcg gaggagggat cactggtgct ggtttgacat tacaagcggc       360
     ggctgctggc atgaaagttg ctgtacttga aatgcaggat ttctcagaag ggacatcctc       420
     acgctcaaca aaactcgtgc atggtggcat ccgttacctc aaaaacttcg atgtcgaagt       480
     cgtttccgat acagtttcag aacgcgctgt tgttcaaggc attgcgccac atattcctaa       540
     gccagatccg atgttacttc ctatctacga tgatgaaggc aagacaacgt ttgatatgtt       600
     ttctgtgaaa attgcgatgg atttgtatga ccgtttggcc ggtgtggatg aagattcgcc       660
     atatgccaac tacactatct caccagaaga agtcctgcac cgcgagccac tcatcaagan       720
     naaaggtttg caaggggctg gagtctatct tgactaccgt aacngcgatg cccgcntggt       780
     gattgataac atccanaaag ctgtggnaga cggtgnccaa nccataagca agatgaaagt       840
     gattgatttt atctanacgg atggacaaat ttctggtatt cgtgcgcgtg atttgttgac       900
     agatcaagtc attgaagtcn aagctaaact tgtgattaac acaagtggac cttgggtaga       960
     taagatccgt tacctgaact tcactcgtcc catcgtgccc aga                        1003
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