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EBI DbfetchID AF000132; SV 1; linear; genomic DNA; STD; PLN; 8998 BP. XX AC AF000132; XX DT 25-MAY-1997 (Rel. 52, Created) DT 15-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Amaranthus hypochondriacus betaine aldehyde dehydrogenase (ahybadh4) gene, DE complete cds. XX KW . XX OS Amaranthus hypochondriacus (grain amaranth) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; OC Caryophyllales; Amaranthaceae; Amaranthus. XX RN [1] RP 1-8998 RX DOI; 10.1016/S0378-1119(98)00381-3 RX PUBMED; 9751804. RA Legaria J., Rajsbaum R., Munoz-Clares R.A., Villegas-Sepulveda N., RA Simpson J., Iturriaga G.; RT "Molecular characterization of two genes encoding betaine aldehyde RT dehydrogenase from amaranth. Expression in leaves under short-term exposure RT to osmotic stress or abscisic acid"; RL Gene 218(1-2):69-76(1998). XX RN [2] RP 1-8998 RA Legaria J.P., Iturriaga G.; RT ; RL Submitted (16-APR-1997) to the EMBL/GenBank/DDBJ databases. RL Plant Molecular Biology, Instituto de Biotecnologia-UNAM, Av. Universidad RL 2001, Col Chamilpa, Cuernavaca, Morelos 62210, Mexico XX FH Key Location/Qualifiers FH FT source 1..8998 FT /organism="Amaranthus hypochondriacus" FT /mol_type="genomic DNA" FT /tissue_type="leaves" FT /db_xref="taxon:28502" FT CAAT_signal 1278..1281 FT /gene="ahybadh4" FT TATA_signal 1313..1318 FT /gene="ahybadh4" FT mRNA join(<1515..1622,2114..2257,4981..5061,5137..5286, FT 5752..5844,5936..6058,6148..6213,6297..6362,6459..6536, FT 6642..6755,6839..6916,6993..7142,7266..7328,8350..8457, FT 8558..8998) FT /gene="ahybadh4" FT /product="betaine aldehyde dehydrogenase" FT CDS join(1515..1622,2114..2257,4981..5061,5137..5286, FT 5752..5844,5936..6058,6148..6213,6297..6362,6459..6536, FT 6642..6755,6839..6916,6993..7142,7266..7328,8350..8457, FT 8558..8641) FT /codon_start=1 FT /gene="ahybadh4" FT /product="betaine aldehyde dehydrogenase" FT /EC_number="1.2.1.8" FT /db_xref="GOA:O04895" FT /db_xref="InterPro:IPR015590" FT /db_xref="InterPro:IPR016160" FT /db_xref="InterPro:IPR016161" FT /db_xref="InterPro:IPR016162" FT /db_xref="UniProtKB/Swiss-Prot:O04895" FT /protein_id="AAB58165.1" FT /translation="MAIRVPSRQLFIDGEWREPIKKNRIPIINPSTEEIIGDIPAATAE FT DVELAVAAARRALKRNKGEDWASASGAHRAKYLRAIAAKITEKKDYFAKLEAMDCGKPL FT DEAARDIDDVAGCFEYYADQAEALDAKQKAPIALPMDTFKCHVLKQPIGVVGLISPWNY FT PLLMATWKVAPALAAGCSAVLKPSELASVTCLELAEVCREVGLPPGVLNILTGLGPEAG FT GPLACHPDVDKVAFTGSTATGSKVMSSAAQLVKPVTLELGGKSPIVIFEDVDLDKAAEW FT TAFGCFWTNGQICSATSRLLVHESIAAEFLDRLVKWCKNIKISDPFEEGCRLGPVVSKS FT QYEKVLKFISTAKSEGATILCGGSRPEHLKKGYYVEPTIISDVSTSMQIWREEVFGPVL FT CQKTFGSEDEAIELANDTQYGLGAAVLSKDLDRCERITKALEVGAVWVNCSQPCFTQAP FT WGGTKRSGFGRELGEWGIENYLNIKQVTRDTSTDEPWGWYKSP" FT 3'UTR 8642..8998 FT /gene="ahybadh4" FT polyA_signal 8719..8724 FT /gene="ahybadh4" FT polyA_signal 8941..8946 FT /gene="ahybadh4" XX SQ Sequence 8998 BP; 2634 A; 1485 C; 1726 G; 3153 T; 0 other; tctagaagtt ggagctgttt gggttaattg ctcacagcct tgctttactc aagctccatg 60 gggaggcacc aagcgtagtg gttttggacg tgaacttggg gaatggtgag tccatatttt 120 tcccgtctac aataaccatt atatcagccc cttgcatcac aacacttaac tcttcatcct 180 tcttgatgtt aactgtggaa taatcctgca ggggtatcga gaattacttg aatataaagc 240 aggtgactcg gatactctac tgatgaaccg tgggatggta caagtctcct tgaagctttc 300 gatgaaattc gcagacgcca tcatcatgaa gtggacaatg gtgtagttta cagtttgaat 360 gtattgttaa ataaagcatt gatgatgatg tatcactcca tagaatggag aaaagtttga 420 atcaggaata atatgtttac atatttgaac aaattctgtg tttattttca ttctaagatt 480 gagcaagcag gatacatttg taactttaaa ctgggtatta ctatttacta taggctaata 540 gctatttatc ttattattat tattataata gtatactcat ggttaaaata caacttttaa 600 taaattaaaa gcagccaact taaattaatc aaaatagcaa cttgaagagg aataaaacac 660 caatttaaac aaggtaaaat ttcaacttga acaggttata ataccaaggt taaaacatta 720 acggtccgtt tggtaggtag gtaataaacg gtggtaatga gaatgaaaaa ctagtgtaat 780 ttttgaaaaa aaatttttta gctaacttga tggtcatact tatccaactc caatcatctc 840 attttcttca taaaattcat tttaatgcat tatcattgag agaggtgata ttaggtggta 900 aagaaaattt gtaaacaaaa ataacaagcg taactttaat ttggtaacaa cttaataggt 960 taaaacacca ctccaaatat gttaaaatac caacttcaaa taccaatttc gacaagttaa 1020 actttaatat gttatatacc aacttttgat agtttttcaa acatgttaaa ataccaactc 1080 caaatagatc aacatttcaa ctttaatagg ttaaaatacc tactcaaata agttaaaata 1140 ccatttttat agattaaaat atcaacccca aataggttaa tacagggaat aagcgcgtgt 1200 tagttaattt tattttgcta attacatatt agtcttttta aataggtgtg tctcttaata 1260 aagacggtct ctcacaacaa tttacgttaa atgatacttg tgtcgtgtgc aatataaatt 1320 taatttaatt tgtattgtga cgcacggccc taccgaagat actcatcgga cttgcctaac 1380 aaaaagacga tcagtattta tcgattcaca ttattcacat cttgtcttga aaatgaaata 1440 ttagtcatct tgctataata tcaacgcttt tacttcttat acttccaact tcaactgatt 1500 ttttctcacc aaaaatggcg atccgtgtac cttcgcgcca gctattcatt gatggagaat 1560 ggagggaacc catcaagaaa aatcgcatcc ctatcatcaa tccttctact gaggagatca 1620 ttgtgttgtt tactttcccc ctttatatgt tttatccaac ttcttcacat gaatagcaaa 1680 accgacaaag atccaaaaca ttgaacttct ctttcatata gtattttgag tgttcttatg 1740 aagttatttc tagattagat tatgataaca gaaatgctat tactgaaagg attctttttc 1800 ctgggttctg gatttatgga tgatgatgat gtgctttaat ggtaattgga attggaatta 1860 ttttttttca gatttaagat tgtttatttt ttttttaact actgggaatc tgtcaaatct 1920 gattttctat gtggggtttg aatttgaatg gtgatgatat gattttcgtg attgaaacta 1980 aagttaaagg atctataaat ttttctatag gttcagttct gcgactctag tttataggga 2040 ttaagacttt tacattgttg ttgatccatc tattggtgat taaagtttgc attcatcatc 2100 atttgggttt tagggtgata ttccggctgc tactgctgaa gatgtggagc ttgcagtcgc 2160 tgcagctaga agagcgctta agaggaacaa aggagaagat tgggcgtctg catctggagc 2220 tcatcgtgct aagtaccttc gggccattgc tgctaaagta tgtattttag ggtcttattt 2280 gattttatgg tattgtgtag actcttgatc catttatgtt cttgatatct acggtgacca 2340 atagtttgat gttggtcact ctgttttgtt taattggaat ggaggagtga tagtgataat 2400 aatataaata gaattattga attagctaaa aatgaaagct gtacattgac atcgaaagat 2460 gtacaacttc ttagtgtagg tgataatccg tctatctgtg atgaacccag gcaagtacag 2520 acaataatga agaaaaatag agagtagcaa gagagaaggg gggcagaatt ttcagaagaa 2580 aagagaagaa ggtacagcag agaagaagaa aagatagggg agagtacaga atttagaggg 2640 agatagtatt tagatattct cattcatacc aatcattatt tacatcatac tatttctagc 2700 tacaagtact cacaacttgc tggccaaatt gattggttac aaaaagatgc tttttctaga 2760 tatactcact aacagaaggc acctatatta ttgttgttag taacttattc tttttccacg 2820 cctgtgatac accttccatc cttttgcttg ctcagtggta tgacacatcc cattacaaag 2880 ctagcatttt cctataagtg aggtgaagcc tttcattgaa gggagggaca atttttatgg 2940 gacgtttgtt tattggtatt agatagtgtt aatgagatgt aaaaaaatat gtcatactgt 3000 tcccatgtat tgcatcccag attttcctat aagtttctac ttgttcgtca acagtctgtt 3060 tcaaaacgaa gacataccct tttagtaagt tttttctctt tatatcgtac ccacacccaa 3120 tcacccattt ttctttattt tcaaattctt gctcagattt atgttggttg tttggattga 3180 ggagtcttgt tattcgtatc tggttcatgt aacttttcag ttaaactcaa ggctagctta 3240 atcttttgct cgttaccagt catattcaat tgggctgaaa tttccaagta cctcattgag 3300 tattaagcta attgaaattg cttgccaaac aaaacaattg ttctaacaac aatggctgag 3360 cacttatttc caagtacctc aaaagttagg atcggctaaa acaaagcact tattccattg 3420 ctgaactgtc attagggtga taataaggtt gaattttagg ctcacaacct tattatttgt 3480 gcccatattt tctttcctca agagagttgt gtcagctatt agtgacagtt ttttactatt 3540 tatttcaaat gagtctcaag gattctctct tgaaaaacat tttcactttg aatttacgaa 3600 gtttctatct ttatggtaaa catggatgta tgagtagacg agtagtatac acttccattt 3660 gggtattttc tttttcttga atatcattta ggtatgtgtt gattgctttc ttgtgagcac 3720 atttggcatt ttgagtgagc atgaagatta tctaatggga ggatttaatc atctagcaat 3780 aaaactgaga cctaatgata ataatgtcga gtacttttaa agtaggtaaa gatgcctaca 3840 tatgctggaa gcctggaatt tcgtatacat ctccgcaaat tgattaactc tagtcatgtt 3900 gaatttatca tttgtacacc attgttttag agttgtaaga gatatagata aagaacattt 3960 gtaatgtttt agtagtcttc tgaaagttgg ccttagattg tactcttgct tggttttgtt 4020 gcgtaagatt ttgtggaata tttatctttg atatgtttgc ttccctaagg agatgaagca 4080 ctaaatttat taagcatttg gatgtattga atctgttgat atcatccctg attcatcaag 4140 tatgtcacta ccatattcta attcaaatgt gttctccaag ggggtattgg gagttcagta 4200 ctcagtatga cctatatctc atttacatac tcaagcatta gatattgata ctttcagggt 4260 cacctggatg caactttttg agacttcaag agtcattgta cttattttat ggattataca 4320 ttgatccttt ggaaggaatc aagtgtttaa gactcactat aatgagtatc aattgaccgt 4380 gcacaaagag tgtttcattt cgattctcac acttcccaca tccctttcct gtcctcctgt 4440 ccccatgtaa caattaagtg tggcggttgc tagtcctttc tcccaatcct cacagaggct 4500 cagctttctg gactagaaga tctccattta aatttatgta aatgggatac aattgtcata 4560 aacaagatta ctcagtacat aggtttaggt gtggacttca cgccatagtg aaaaatctca 4620 agtttggtcg ttgcggtaag ggtcacagtt gcgtattggg tcgttaaacc actttcacaa 4680 ccaagttggt gattttgcag ttgtggccta tatcatggtc tcttttacca taagtttttg 4740 atatataata ttgccacaat gctctgatgt tatggtgtga aataaggttt cagtcatggt 4800 tgtggtaatg gtcgcagaaa tgacttttgt ggttgcctcg gcctatattt tagtcatggt 4860 aagatcaaaa accattacaa cacttttgat acggtgcgat gctttgctct atgcgtgatc 4920 cggatgatat tttgacattt tgcttgtgct ccatgcctga ctctctaatt ttgcttgtag 4980 ataacagaga aaaaagatta ttttgcaaaa cttgaagcca tggattgtgg gaaaccactg 5040 gatgaagcag ctagggacat tgtaagttta tgttgtagta tcgttatata tcttctaaat 5100 actgtttctt tcccgagtat taactaggct ttccaggatg atgttgctgg atgttttgaa 5160 tattatgccg atcaagcaga agcccttgat gctaaacaaa aggctccaat tgcccttcct 5220 atggacactt tcaaatgcca tgtgcttaaa caacccattg gtgttgttgg gttgatttct 5280 ccttgggtag tatggacccc cagcgctctt tcctccaata agaaactggt gaaattgaaa 5340 caaatatgac aattcattca tttcttgcgt tcatcaaatc tgaaggggat cgatattaat 5400 cagataaaac aacttgtcta atgaatgggg gaagtgcaag tgcgcaacag gatatctcac 5460 aatcaatttt attcgttgac tgattatttt tttgcggaac atgtattttt gatgaacaca 5520 caagagaagg aatggacaat aacatataag ttttttttgc gatttcatgc ttgcaagttg 5580 caactcttca ctgaaggatc acttaatttg aaaataaaga ttttgcgtct tttttcagtt 5640 ttttcgtcct ttttttatat attttttcct tgtgcaaatg tgcatttagc ttcttgttat 5700 gagcttggga aatgtgatgt tttatgtttc ttgtcatctt tttcattgaa gaattatccg 5760 cttctaatgg caacatggaa agttgctcca gctcttgctg ctggttgctc agctgtactt 5820 aagccgtctg aactggcatc cgtagtagct ttattctgaa actatcactg tccgaacttc 5880 actcaaagcg atactgatat ttctgttctt cgaaaacttc gacttttgac ttcagacttg 5940 cctagaattg gctgaagtgt gcagagaagt gggactgcct cctggcgtat taaatatttt 6000 aacaggatta ggtcctgaag ctggtgggcc gttagcttgc catcctgatg ttgacaaggt 6060 tacattttga gtgcatttat gtaaaatgaa tctgtagatg tgaacttttc ctttcctgtt 6120 cattttaatc acttatctac ttgataggtt gcatttactg ggagtacagc tactggtagc 6180 aaggttatgt catccgctgc tcaattggtc aaggtttgtc acaaatgtac tccatgaaag 6240 ctttgatata acttaatgtt gagttccttc tatgaaattt ttaacatgaa ctgcagcctg 6300 ttacattaga acttggaggg aaaagtccta ttgttatctt tgaagatgtt gacttggata 6360 aagttagttt ctataagagc agacacatca gttatttgtc tcgtgtagat ctatcaacac 6420 atgttctaat acgttaaaaa ctttttcaaa ttgaacaggc tgctgaatgg actgcttttg 6480 gctgtttttg gacaaatggt caaatttgca gtgcaacatc gagattactt gtgcatgtaa 6540 gcaatcaatc attaccatgg aatattgcct gattttcgat gtgttgaatt ttgttgtgtt 6600 gtctcctata tttaaaaata tcgtcttcga aatcatttca ggaaagcatc gcagctgaat 6660 ttttggatag gcttgtaaaa tggtgcaaaa acataaagat ctctgacccg tttgaggaag 6720 gctgtcgact tggtcctgtt gtgagtaaga gtcaggtatg catacttgtt acttctgttt 6780 ttttagatct aactattccg agctgaaggg tatcttatat ttattttgtg gggttcagta 6840 tgaaaaagtt ttgaagttca tttcaacagc aaagagtgag ggtgcaacta ttttgtgtgg 6900 aggttcccgt cccgaggtaa actaatggac atattttaat cgatccatcg ttgtggttta 6960 tgtaatctta ctgttttatt ggaatcgtgc agcatttgaa gaaagggtat tatgttgaac 7020 caacaattat aagtgatgtc tccacttcca tgcaaatatg gagggaagaa gttttcggcc 7080 cagtcttatg tcaaaaaacc tttggttctg aagatgaagc cattgaactg gctaatgata 7140 ccgtaaagct atttcaaata gtagaactgt ccaaaaatac ttttcagacc atgcctttat 7200 tataccgtgt tcccagattt tgctttattt ctagaatctt attctgaccg atcactttgt 7260 ttcagcagta tggtttaggg gctgctgtgt tatcgaaaga tcttgatcgg tgtgagagaa 7320 taacaaaggt gagaattgtt gagtagaggc gttcattctg gtcatagggt tgatttcaac 7380 ttttcaagtc aggtgtttca gggtcggtca aatcgggttt tttgtcaaat tggttttaca 7440 taattgcaaa atcattttta aagtgacaat tgggtcgggt tataatgttt gggttaatat 7500 tgggtcgtcg ggtttgtttt aaatacctct actgttgagg tttgtttgtg ctttgaaagt 7560 tttcagaaaa tgccaagacc acattttatc gtaaattgta ttttgctgct attatcaggc 7620 attgcaagct ggaattgtgt gggttaactg ctcacaacca tgcttttgcc aagctccatg 7680 gggaggcacg aagcgtagct ctttggacgt gaactcggga atggtgagac ccatttcttt 7740 ttgcaatttt tctgtcaact tcttcactcc caagatagcc agatatatgt aagcttgtct 7800 tttcgttatg tgcacttagt ttcatctgaa gggacaggtc acagaaagta ttatgataat 7860 atcccttttt aaagtatcca acgaaaaaca tatctggaca aaatattttc ctggatgact 7920 tttactcctt cctgatttct tcactccctt aattcaattt gcataactgt atagtttgca 7980 acataatgac aaatttttat gtacaaattt gtttgaacgt tctgattctt gcgaactgct 8040 gttttatctt cttgatgtgg aactatgatg cttaattgtt ctgcagggtt atcgagaatt 8100 acttgaatat caaacaagtg actgatatat ttccgatgaa ccatgggttt ggtacaagtc 8160 tccttcaaag ttgtgagtca aagttgagga acttctcaaa tcaccatcat aaagccgtaa 8220 aagatgagag ctccaccgcg gtggcgtcgc agcgtgcatt acgaaactca gattcgaact 8280 tgtatccgca ttcaaagtca tatcgatttt tctttgcaaa ttttatccat tccgtctttc 8340 tttgatcagg ctctagaagt tggagctgtt tgggttaatt gctcacagcc ttgctttact 8400 caagctccat ggggaggcac caagcgtagt ggttttggac gtgaacttgg ggaatgggta 8460 gtccatattt ccgtctacaa taacattata tacgcccttg catcacaaca cttaactctt 8520 catccttctt gatgttaact gtggaataat cctgcagggt atcgagaatt acttgaatat 8580 aaagcaggtg actcgggata cttctactga tgaaccgtgg ggatggtaca agtctccttg 8640 aagctttcga tgaaattcgc aagacgccat catcatgaag tggacaatgg tgtagtttac 8700 agtttgaatg tattgttaaa taaagcattg atgatgatgt atcactccat agaatggaga 8760 aaagtttgaa tcaggaataa tatgtttaca tatttgaaca aattctgtgt ttattttcat 8820 tctaagattg agcaagcagg atactttgta actttaaact gggtattact atttactata 8880 gtatagtatt tatcttatta ttattattat aatagtatac catggttaaa atacaacttt 8940 aataaaatta aaacaccaac ttaaattaat caaaatacgc aatgaagaga taacacca 8998 // |
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