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EBI DbfetchID AE006469; SV 1; circular; genomic DNA; STD; PRO; 1354226 BP. XX AC AE006469; XX DT 18-JUL-2002 (Rel. 72, Created) DT 28-JUN-2008 (Rel. 96, Last updated, Version 7) XX DE Sinorhizobium meliloti 1021 plasmid pSymA, complete sequence. XX KW . XX OS Sinorhizobium meliloti 1021 OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; OC Sinorhizobium/Ensifer group; Sinorhizobium. OG Plasmid pSymA XX RN [1] RP 1-1354226 RX DOI; 10.1073/pnas.161294798 RX PUBMED; 11481432. RA Barnett M.J., Fisher R.F., Jones T., Komp C., Abola A.P., Barloy-Hubler F., RA Bowser L., Capela D., Galibert F., Gouzy J., Gurjal M., Hong A., Huizar L., RA Hyman R.W., Kahn D., Kahn M.L., Kalman S., Keating D.H., Palm C., RA Peck M.C., Surzycki R., Wells D.H., Yeh K.-C., Davis R.W., Federspiel N.A., RA Long S.R.; RT "Nucleotide sequence and predicted functions of the entire Sinorhizobium RT meliloti pSymA megaplasmid"; RL Proc. Natl. Acad. Sci. U.S.A. 98(17):9883-9888(2001). XX RN [2] RP 1-1354226 RA Barnett M.J., Long S.R., Yurgel S., Schroeder B.K., Kamp P.B., Krol E., RA Linke B., Goesmann A., Runte K., Capela D., Becker A.; RT "Reannotation of the Sinorhizobium meliloti 1021 plasmid pSymA"; RL Unpublished. XX RN [3] RP 1-1354226 RA Barnett M.J., Fisher R.F., Jones T., Komp C., Abola A.P., Barloy-Hubler F., RA Bowser L., Capela D., Galibert F., Gouzy J., Gurjal M., Hong A., Huizar L., RA Hyman R.W., Kahn D., Kahn M.L., Kalman S., Keating D.H., Palm C., RA Peck M.C., Surzycki R., Wells D.H., Yeh K.-C., Davis R.W., Federspiel N.A., RA Long S.R.; RT ; RL Submitted (29-MAR-2001) to the EMBL/GenBank/DDBJ databases. RL Biological Sciences, Stanford University, 371 Serra Mall, Stanford, CA RL 94305, USA XX RN [4] RC Protein update by submitter RP 1-1354226 RA Barnett M.J.; RT ; RL Submitted (25-JUN-2008) to the EMBL/GenBank/DDBJ databases. RL Biological Sciences, Stanford University, 371 Serra Mall, Stanford, CA RL 94305, USA XX DR GR; AE006469_GR. XX CC On or before Apr 21, 2008 this sequence version replaced CC gi:14523055, gi:14523063, gi:14523073, gi:14523086, gi:14523103, CC gi:14523115, gi:14523126, gi:14523136, gi:14523147, gi:14523158, CC gi:14523169, gi:14523181, gi:14523192, gi:14523202, gi:14523214, CC gi:14523233, gi:14523243, gi:14523259, gi:14523272, gi:14523279, CC gi:14523291, gi:14523301, gi:14523313, gi:14523320, gi:14523330, CC gi:14523347, gi:14523360, gi:14523374, gi:14523386, gi:14523398, CC gi:14523411, gi:14523424, gi:14523438, gi:14523449, gi:14523458, CC gi:14523472, gi:14523488, gi:14523499, gi:14523511, gi:14523526, CC gi:14523537, gi:14523546, gi:14523559, gi:14523573, gi:14523581, CC gi:14523591, gi:14523602, gi:14523608, gi:14523619, gi:14523631, CC gi:14523644, gi:14523658, gi:14523674, gi:14523688, gi:14523701, CC gi:14523714, gi:14523722, gi:14523734, gi:14523745, gi:14523762, CC gi:14523776, gi:14523793, gi:14523806, gi:14523817, gi:14523832, CC gi:14523845, gi:14523856, gi:14523869, gi:14523880, gi:14523891, CC gi:14523904, gi:14523915, gi:14523928, gi:14523936, gi:14523947, CC gi:14523957, gi:14523972, gi:14523982, gi:14523993, gi:14524003, CC gi:14524019, gi:14524033, gi:14524043, gi:14524053, gi:14524063, CC gi:14524075, gi:14524085, gi:14524098, gi:14524107, gi:14524117, CC gi:14524132, gi:14524143, gi:14524154, gi:14524165, gi:14524175, CC gi:14524186, gi:14524199, gi:14524209, gi:14524219, gi:14524230, CC gi:14524243, gi:14524254, gi:14524266, gi:14524277, gi:14524289, CC gi:14524303, gi:14524312, gi:14524322, gi:14524332, gi:14524346, CC gi:14524359, gi:14524370, gi:14524380, gi:14524399, gi:14524408, CC gi:14524419, gi:14524427, gi:14524436, gi:14524446, gi:14524456, CC gi:14524466. XX FH Key Location/Qualifiers FH FT source 1..1354226 FT /organism="Sinorhizobium meliloti 1021" FT /plasmid="pSymA" FT /strain="1021" FT /mol_type="genomic DNA" FT /db_xref="taxon:266834" FT gene 1353..4457 FT /gene="fdoG" FT /locus_tag="SMa0002" FT CDS 1353..4457 FT /codon_start=1 FT /transl_table=11 FT /transl_except=(pos:1965..1967,aa:Sec) FT /gene="fdoG" FT /locus_tag="SMa0002" FT /product="formate dehydrogenase, major subunit (formate FT dehydrogenase alpha subunit)" FT /function="Uncharacterized anaerobic dehydrogenase" FT /EC_number="1.2.1.2" FT /note="Formate dehydrogenase alpha subunit precursor (FDH FT alpha subunit) (Formate dehydrogenase large subunit), FT Formate dehydrogenase, alpha subunit, anaerobic, FT Molydopterin dinucleotide binding domain, formate-DH-alph: FT formate dehydrogenase, alpha subunit, high confidence in FT function and specificity; selenocysteine" FT /db_xref="GOA:Q931E0" FT /db_xref="InterPro:IPR019546" FT /db_xref="UniProtKB/TrEMBL:Q931E0" FT /protein_id="AAK64659.1" FT /translation="MEAVPMNVDLSRRSFLKLAGAGAAATSLGAMGFGEAEAAVVAHVR FT PHKLTTTTETRNTCPYCSVACGVIIYSKGDLRKGEAADIIHIEGDADHPTNRGTLCPKG FT AALKDFVKSPTRLQYPMHRKPGSDKFERISWEDAFDRIARLMKDDRDANFIAANAAGVP FT VNRWTTVGMLAASATTNETAWATFKFAKALGIVGFDNQARVUHGPTVSSLGPTFGRGAM FT TNSWTDIKNTDLVVVMGGNAAEAHPCGFKWVTEAKATRGAKLIVVDPRYTRTASVSDYY FT APIRQGTDIAFLNGVMKYCIDNDKVQWDYMKAFTNASYLVKDGFGYQDGLFTGYDAEKR FT DYDKSTWDYVLGDDGFVVTDPALQHPRCVWNLLKAHLAPYTPEMVERICGTPKDKFLKV FT AEMISECSSPTKTMTSMYALGWTQHSSGSQNIRAMAMLQLILGNIGVRGGGMNALRGHS FT NIQGLTDLGLMSHLLTGYLTMPTEKDVDFTTYMSTRQFKPLRPGQTSYWQNYRKFMVSF FT QKAMWGDAARIDNDWAFNYLSKLDVPAYDVLRVFELMYAGKVNGYICQGFNPLLAFPNR FT DKNTKALSNLKWLVTMDPLDTETARFWENHGDFNPVDTASIQTEVFQLPTTCFAEEEGS FT LTNSGRWLQWHWAGGTPPGEAKHDTYIVAQIFLRMKEMYRNEGGAFPDPILNLSWDYAD FT PNEPTPEELAKEINGRALTDLMDPANPMKVQVAAGKQILNFSQLRDDGSTMCGCWIYSG FT NFNEQGNNMARRDNHDPDDTGAYLGWSFAWPLNRRTLYNRASADLQGKPWDPSRKLLEW FT DGTKWAGYDVPDIAPTAKPDEIGPFIMNQEGTARLFSRGLMRDGPFPAHMEPFESPVAN FT VFNPKMRGNPVSRVFQTDVAQMGLSDEFPYAATSYRLTEHFHYWTKHNRVNSALQPEFF FT VEISEELAEEKNIENGGWVRVWSKRGSVKAKAVVTKRIRPLMCDGKPVHVVGIPLHWGF FT TGSAKKGLGPNSLAPFVGDANIETPEYKAFLVNIEPSTAPEEATV" FT gene 4454..5446 FT /gene="fdoH" FT /locus_tag="SMa0005" FT CDS 4454..5446 FT /codon_start=1 FT /transl_table=11 FT /gene="fdoH" FT /locus_tag="SMa0005" FT /product="formate dehydrogenase-O, iron-sulfur subunit" FT /function="Fe-S-cluster-containing hydrogenase components FT 1" FT /EC_number="1.2.1.2" FT /note="Formate dehydrogenase-O, iron-sulfur subunit FT (Formate dehydrogenase-O beta subunit) (FDH-Z beta subunit) FT (Aerobic formate dehydrogenase iron-sulfur subunit), FT Formate dehydrogenase, beta subunit, FDH-beta: formate FT dehydrogenase, beta subunit, high confidence in function FT and specificity" FT /db_xref="GOA:Q931D9" FT /db_xref="HSSP:1KQF" FT /db_xref="InterPro:IPR015246" FT /db_xref="UniProtKB/TrEMBL:Q931D9" FT /protein_id="AAK64660.1" FT /translation="MMDSPRTAVSNPPVQPMESNLTERDLVRRSATTELPPPERQLTPV FT AKLIDVSKCIGCKACQSACVEWNDTHPGIGENVGYYTNPHDLTEDMFTLMRFTEWVNPE FT TDNLEWLIRKDGCMHCADPGCLKACPAPGAIVQYTNGIVDFVHENCIGCGYCIKGCPFN FT IPRISKVDHRAYKCTLCSDRVAVGQGPACAKACPTQAIVFGTKEDMKKHAEHRIADLKS FT RGYTNAGLYDPPGVGGTHVMYVLHHSDKPHIYSDLPDDPKISAVVQAWKGVTKYTGLAA FT MGLVAAGAILHGVFGRANRVQPEDEESAERLVDSAGAAGRTPDDKGQRS" FT gene 5424..6110 FT /gene="fdoI" FT /locus_tag="SMa0007" FT CDS 5424..6110 FT /codon_start=1 FT /transl_table=11 FT /gene="fdoI" FT /locus_tag="SMa0007" FT /product="formate dehydrogenase, cytochrome B556 (FDO) FT subunit" FT /function="Cytochrome b subunit of formate dehydrogenase" FT /EC_number="1.2.1.2" FT /note="Formate dehydrogenase, cytochrome B556 subunit FT (Formate dehydrogenase gamma subunit) (FDH gamma subunit), FT Formate dehydrogenase, gamma subunit, formate- DH-gamm: FT formate dehydrogenase, gamma subunit, high confidence in FT function and specificity" FT /db_xref="GOA:Q931D8" FT /db_xref="HSSP:1KQF" FT /db_xref="InterPro:IPR006471" FT /db_xref="UniProtKB/TrEMBL:Q931D8" FT /protein_id="AAK64661.1" FT /translation="MTKASDLEPEDAIHRGPPVTVDRYGPGKRVNHWITASSLILLALS FT GLAMFHPSLFFLTGLFGGGQNTRMLHPWIGVVLFFSFYIFFFQLWKANLFTRADMGWFT FT GIRDVIGGHEDRLPEMGKYNAGQKVIFWAMALLIVALIITGVIIWDQYFYSYTSIETKR FT FAVLAHAVAAVLIICVFIVHVYAAFWTRGTFRAMTKGSVTGGWAWRHHRKWLKELAGRG FT RIDPAE" FT gene 6149..7069 FT /gene="fdhE" FT /locus_tag="SMa0009" FT CDS 6149..7069 FT /codon_start=1 FT /transl_table=11 FT /gene="fdhE" FT /locus_tag="SMa0009" FT /product="Formate dehydrogenase accessory protein FdhE" FT /note="Formate dehydrogenase accessory protein, Protein FT involved in formate dehydrogenase formation, FdhE: formate FT dehydrogenase accessory protein FdhE, conserved FT hypothetical protein" FT /db_xref="GOA:Q931D7" FT /db_xref="InterPro:IPR006452" FT /db_xref="UniProtKB/Swiss-Prot:Q931D7" FT /protein_id="AAK64662.1" FT /translation="MSVSPVQPDPSVIGGVPKAPFVLKPNLARLFNDRASRFEALAQGS FT HLAPYLNFLAGITRIQSELVSALPPPEPVPADRVERARANAMPPIDRAAMGGSPDCREV FT LQQFFEKAEALEKPAAAAEALAQVRTADEEMLTWMIGNVMADDLPVESLAHHLYVAAAM FT QIQAARLAAGLDGSRLVPIRVGVCPACGGRPVASMVIGFHGAEGARYASCSCCATMWNE FT VRVKCLACGSTKGIGYQAVETGDEEATVKAEVCDTCNSWMKILYQNKNPSLDVVADDVA FT SLGLDLLMKDTEYKRAGFDPFLMGY" FT gene 7074..8474 FT /gene="selA" FT /locus_tag="SMa0011" FT CDS 7074..8474 FT /codon_start=1 FT /transl_table=11 FT /gene="selA" FT /locus_tag="SMa0011" FT /product="L-seryl-tRNA selenium transferase" FT /function="Selenocysteine synthase [seryl-tRNASer selenium FT transferase]" FT /EC_number="2.9.1.1" FT /note="L-seryl-tRNA(Sec) selenium transferase (Cysteinyl- FT tRNA(Sec) selenium transferase) (Selenocysteine synthase) FT (Selenocysteinyl-tRNA(Sec) synthase), L-seryl-tRNA selenium FT transferase, L-seryl-tRNA selenium transferase, selA: FT L-seryl-tRNA selenium transferase, high confidence in FT function and specificity" FT /db_xref="GOA:P58226" FT /db_xref="InterPro:IPR004534" FT /db_xref="UniProtKB/Swiss-Prot:P58226" FT /protein_id="AAK64663.1" FT /translation="MSGPVDLRALPSVDQMLNAAAVSPLVEQHGRAVVTDELRKVLGEV FT RLAVRSGGALPGKDGIVAALLSRLDDRSRSNLRPLFNLTGTVLHTNLGRALLAQEAVDA FT AVDAMREAAALEFDLDSGGRGERDSHLRELLCELTGAEDATVVNNNAAAVLIALNSVGA FT GRQAIVSRGELIEIGGAFRMPDIMERAGVDLVEVGTTNRTHAKDYVKAIGPETALILKV FT HTSNYRIEGFTAEVPGAELAAIAHERGVVLLNDLGSGSLVDLSRYGLGREPTVREAVAE FT GADLVTFSGDKLLGGPQAGFIVGRRDLIAEINRNPLKRALRVDKIRIAATAATLKLYRD FT PDRLASRLPTLFMLSRVQAEVRAQAERLAPQVGAMLAPSGYAVEVCSCSSQIGSGALPV FT DTIPSAGLRIVGSSGSALEALAALFRSLSRPILGRLRDGALVLDLRCLSDEAEFLKTLS FT EGSGDAVA" FT gene 8383..9255 FT /locus_tag="SMa0013" FT CDS 8383..9255 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0013" FT /product="hypothetical protein" FT /db_xref="GOA:Q931D6" FT /db_xref="InterPro:IPR006597" FT /db_xref="UniProtKB/TrEMBL:Q931D6" FT /protein_id="AAK64664.2" FT /translation="MVRWFWTCAVCPMRRNSSKPCPRVAAMRWLERLRGNKPQTAPVAD FT PMAEALARAQAGDYGSALRIWEPLARAGVARAQNNIGACFAEGLGVPENRELACKWLRL FT AAEAGDPVGQRNYAALHMQGLAGTDADYGIAAEYYRRAAEKGDAPAQDMLSWLLLEGEI FT MTADPLEARRWAECAAEAGIASSMTRLGMLHHNALGVERDAQKAVYWWLKAAERGDADA FT QAMLGAACHMGAGTIRNGVTALVWLIRATEGGSTLAKPFMGPVRDSLSPAEIQEAERRA FT QEPLSRRAP" FT gene 9252..11252 FT /gene="selB" FT /locus_tag="SMa0015" FT CDS 9252..11252 FT /codon_start=1 FT /transl_table=11 FT /gene="selB" FT /locus_tag="SMa0015" FT /product="Selenocysteine-specific elongation factor" FT /function="GTPases - translation elongation factors" FT /note="Selenocysteine-specific elongation factor (SelB FT translation factor), Translation elongation factor, FT selenocysteine-specific, Elongation factor Tu GTP binding FT domain, selB: selenocysteine-specific translation FT elongation factor, high confidence in function and FT specificity" FT /db_xref="GOA:Q931D5" FT /db_xref="HSSP:1KK1" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q931D5" FT /protein_id="AAK64665.1" FT /translation="MIVGTAGHIDHGKTTLVKALTGVDTDRLKEEKARGITIDLGFAYA FT RFAKDAVTGFVDVPGHERFIHTMLAGAGGIDYAMLVVAADDGIKPQTLEHLAILDLLGV FT SRGLVAITKADLADPARLENLTDEIGAVLSSTSLRDAEILPVSVAAGQGIELLKERLAA FT AECATAASAVGGRFRLAVDRSFTLSGAGTVVTGTVLSGSVGVGDQVTVSPAGRSARVRS FT IHAQNQRAERGFAGQRCALNLAGEGISKDAITRGDMVVDPHLHAPSDRLDADLSVLESE FT TKPIGEWFSARFHHASAETGIRIVPLEGPLLPGERRRVQLVLDRPIAAAVGDRFILRDV FT SARRTIGGGRLLDLRAPARKRRSPERLSYLQAASLSHAGEALAALLDVPPFLVDLDVFA FT RDRALSEAELQNAIRSASAEVIEGSAVRHALSKRQRAAFSDEVQRVLSAFHVENPDLQG FT IGRERLRLQVTPRLPPPAFLVALRAEQTAGRLVLEGAFVRLPGHEVRLSEKEEELYARI FT LPHLEGEERFRPPRVRDFAEALGVDEREIRRILKLCARLGRVDQIRHDHFFTRQTTAEM FT VAIIRQVAANAERGEFSAGLFRDRVNNGRKVAIEILEFFDRQGVTIRHGDVRRVNPHRL FT DLYEGPVPEADEGRGSSPVERPDFKFYRAGS" FT gene 11506..12063 FT /locus_tag="SMa0017" FT CDS 11506..12063 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0017" FT /product="hypothetical protein" FT /note="InterPro finds weak similarity to Homeodomain-like FT HTH_fis: Helix-turn-helix domain fis-ty" FT /db_xref="UniProtKB/TrEMBL:Q931D4" FT /protein_id="AAK64666.1" FT /translation="MAAADDGRNGGGLRQRKARRGLPQARRNHLSGTTRIGKRQAQILG FT SGGLGPSNEPRGGCCMPLGREIPSEDGGENSRSKRSAWGRRQKTMSLTTAFIAELIRAA FT NEVERLTPYEISRLLDRSVDTIRDMRRQTGIAASHRARDVVIDLQLASARARDLSAAET FT RDVLLDAADIIRTLKIVLDGKE" FT gene complement(12259..12546) FT /locus_tag="SMa5000" FT CDS complement(12259..12546) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa5000" FT /product="hypothetical protein" FT /note="Has some similarity to S; meliloti SMa1907 and a FT group of conserved hypothetical proteins; Possible protein FT fragment created by insertion of the adjacent insertion FT element, TRm2011" FT /db_xref="UniProtKB/TrEMBL:B3KLV9" FT /protein_id="ACF07957.1" FT /translation="MSSNVSIISPWNMEFIRSVLGEAGYNAKLLVDDPRSFETAELLVT FT KLFLAGEDSRPGLAAKLECQLGKAGGYRRPPGSSLARYAIQGLPSELQFS" FT repeat_region 12658..13716 FT /rpt_family="ISRm2011-2/ISRm11" FT /note="SMa3000; predicted by homology" FT gene 12754..13161 FT /locus_tag="SMa0018" FT CDS 12754..13161 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0018" FT /product="TRm2011-2a transposase" FT /note="Transposon-related functions, high confidence in FT function and specificity" FT /db_xref="UniProtKB/TrEMBL:Q926A8" FT /protein_id="AAK64667.1" FT /translation="MARPFSNDLRERVVDAVTGEGLSCRAAAKRFGIGISTAIDWVRRF FT RETGSAAPGQMGGHKPRKLSGPHRAWLLCRCRERDFTLHGLVAELSERGLKVDYRAVWT FT FVHEEGLSYKKRRWSPANGSGPTSPATGHDG" FT gene 13227..13700 FT /locus_tag="SMa0020" FT CDS 13227..13700 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0020" FT /product="TRm2011-2b transposase" FT /note="Transposon-related functions, high confidence in FT function and specificity" FT /db_xref="UniProtKB/TrEMBL:Q925Y4" FT /protein_id="AAK64668.1" FT /translation="MAPLRGWAPRGERLVGYAPFGHWNTMTFVAALRADRVSAPFILDG FT PINGERFRIYVQQVLVPELKAGDIVILDNLGSHKGQEIRAAIRKAGARLFFLPKYSPDL FT NPIEKLFAKIKHWLREAQARSRDAIHDELRHILQAVTPQECAAYFKEAGYERA" FT gene complement(14450..15094) FT /locus_tag="SMa0021" FT CDS complement(14450..15094) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0021" FT /product="hypothetical protein" FT /note="Contains a partial signal receiver domain in FT carboxy-terminus of predicted protein" FT /db_xref="GOA:Q931D3" FT /db_xref="InterPro:IPR001789" FT /db_xref="UniProtKB/TrEMBL:Q931D3" FT /protein_id="AAK64669.1" FT /translation="MYRLYNHAIARFSLDCFEGLTGDKTCRLKAQAWLIAELHQLGYRD FT MPQKRCCAYRGLRHSYRKIAKEPRSEQTSSCEEADMKPATILLAEDEALLLLDYEAALA FT DAGFVVVAVARGGKAIEVWRSADSEVAGVATDIRFYELPNGWSVARVAREIYPGIPIVY FT GTGHGALEWRSRGVANSILLEKPFALAQLVTAVSELLNEPVLLSVAPDPNP" FT gene 15716..15807 FT /gene="selC" FT /locus_tag="SMa0022" FT tRNA 15716..15807 FT /gene="selC" FT /locus_tag="SMa0022" FT /product="tRNA-Sec" FT /anticodon=(pos:15750..15752,aa:Sec) FT /note="selenocysteine" FT gene 15826..16209 FT /locus_tag="SMa5014" FT CDS 15826..16209 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa5014" FT /product="hypothetical protein" FT /note="Similar to hypothetical protein from XautDRAFT_0850 FT [Xanthobacter autotrophicus Py2]" FT /db_xref="UniProtKB/TrEMBL:B3KLW0" FT /protein_id="ACF07958.1" FT /translation="MTAETPGTDFDDWVVSTYRDVGSFTMLFVLLRIGDTSVDLLRSAY FT LHVVGDELRWPDMVQLFRGAGVEWSGAVFYRAGREGLVEDGEAKSRLASLVFKLNEDRS FT LISEGDLFNADGLRLTIEEIKPH" FT gene complement(16251..17318) FT /locus_tag="SMa0025" FT CDS complement(16251..17318) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0025" FT /product="hypothetical protein" FT /note="Miscellaneous; Hypothetical/Global homology" FT /db_xref="InterPro:IPR002931" FT /db_xref="UniProtKB/TrEMBL:Q931D2" FT /protein_id="AAK64670.2" FT /translation="MLNRRRFLTNAATAAAATLWVSKGGMQARAEEAGNGSPWRRFEII FT TKVDLQPAEGPAQLWLPVVRSAGDYQKADAPLWVSNSTDIRMEKDPSSGADILRVMWED FT EPRRVIEVTQHVATRDRRVTSKIAATEAELQHELRGTPSMPVDGIVKTTAMRIVEGRDR FT AEDRARAIYDWVIDNTFRDANIDGCGVGNARDMLETGYFGGKCADISSLFVSLARAAGL FT PARDVFGIRVADSADFKSLGRSGDITKAQHCRAEVYLDAHGWVPVDPADVRKVVLEENL FT PLDNPAVRAFREKAYGNWEMNWVGYNTARDLVLPGGELRQGFLMYPAAVTSRGELDCLN FT PQTFAYSITSREITA" FT gene complement(17424..17852) FT /locus_tag="SMa0026" FT CDS complement(17424..17852) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0026" FT /product="hypothetical protein predicted by Glimmer" FT /db_xref="UniProtKB/TrEMBL:Q931D1" FT /protein_id="AAK64671.1" FT /translation="MEQAFPNIVGGDEKEIAMSNLAPTRPSACVLAAFCLLIALAPNPA FT SAQNTNERADCAAAAGKAEPATPPDRASADGTAPGNSGSTGWTGGTGGAHIGTNPQGAT FT AGSTTWQPPTARGIDLATAPEIPAPETAAPGTQTPTDC" FT gene complement(17865..18914) FT /gene="selD" FT /locus_tag="SMa0028" FT CDS complement(17865..18914) FT /codon_start=1 FT /transl_table=11 FT /gene="selD" FT /locus_tag="SMa0028" FT /product="selenide, water dikinase" FT /function="Selenophosphate synthase" FT /EC_number="2.7.9.3" FT /note="Selenide,water dikinase (Selenophosphate synthetase) FT (Selenium donor protein), Selenide water dikinase, AIR FT synthase related protein, N-terminal domain, selD: FT selenide, water dikinase, high confidence in function and FT specificity" FT /db_xref="GOA:Q931D0" FT /db_xref="InterPro:IPR004536" FT /db_xref="UniProtKB/Swiss-Prot:Q931D0" FT /protein_id="AAK64672.1" FT /translation="MNTLAPRLTDLAHGGGCGCKLAPSVLQQLLANQPAARPFAQLLVG FT NDMADDAAVWQVDDNTCVIATTDFFMPIVDDPRDFGRIAATNAISDVYAMGGKPILALA FT IVGMPINKLDSTTIAKILEGGASICAEAGIPVAGGHSIDSVEPIYGLAVIGLCHPSEVR FT RNGGVKAGDALILTKGIGVGIYSAAIKKNALPPGCYEEMIGSTTLLNRIGADLAADPDV FT HALTDVTGFGVLGHGLEMARASQLSLTLRLSAIPFLSQAYMLAEQGFITGASGRNWASY FT GADVVLPDDLPDWQRLLLADPQTSGGLLVACAPEKAGALVEKVRLAGYPLAGIVGTAAA FT GAAQIKVIS" FT gene complement(19209..19436) FT /locus_tag="SMa0031" FT CDS complement(19209..19436) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0031" FT /product="conserved hypothetical protein" FT /note="similar to hypothetical protein NB311A_21296 from FT Nitrobacter sp; Nb-311A" FT /db_xref="UniProtKB/TrEMBL:Q931C9" FT /protein_id="AAK64673.1" FT /translation="MSEWIDFERWPDCKRMERPGIVFEVTNGDQTLLTGCVVPLPLPSD FT WVAHPLRFRAVPQPRPRHSSPLPKPAGPQQ" FT gene complement(19453..21108) FT /locus_tag="SMa0034" FT CDS complement(19453..21108) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0034" FT /product="Serralysin-like metalloprotease" FT /function="RTX toxins and related Ca2+-binding proteins" FT /EC_number="3.4.24.40" FT /note="Serralysin-like metalloprotease, C-terminal, family FT membership" FT /db_xref="GOA:Q931C8" FT /db_xref="HSSP:1OM8" FT /db_xref="InterPro:IPR018512" FT /db_xref="UniProtKB/TrEMBL:Q931C8" FT /protein_id="AAK64674.1" FT /translation="MPAATTYATTGNAYIDGLLGDWKWGIKDFTFSFPTSASFYSAGYG FT NGEPLKGFAALSGAQQAATRAALDQFSSVANVTFTEITESATKHADLRLASSDAPSTAW FT AYFPSTAAEGGDAWFNKSSGHYSRPVKGNYAYVTFLHETGHALGLEHAHEGNVMPVNRD FT SMEYTVMSYRSYVGASTTTGYTNETWGYAQSLMMYDIAALQHMYGADFTTHSENTTYRW FT SPTSGEMFVNGMGQGAPGGNKILLTVWDGGGTDTYDFSNYTTALKVDLRPGEWTTTSAA FT QLAKLHYDGSKVAIGNIANALQYQGDTRSLIENAKGGAGNDAITGNAAANALWGNGGND FT RLIGGDGNDNLAGGAGADRLDGGNGTDLANYSNATAGMVADLYSPGSNTGEAAGDTYVS FT IERLYGSAFNDTLRGDNRANLLNGLAGNDMLNGRDGNDTLIGGNGADRLIGGGGADTFV FT FQTTAQSAPAFRDVIDDFASGVDRMDLRSIDASSKAIGDQAFLFIGSSAFHGKAGELNF FT RSGIVSGDVNGDGLADFQIRVMNLSALSGSDFLL" FT gene 21429..23051 FT /locus_tag="SMa0036" FT CDS 21429..23051 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0036" FT /product="ABC transporter, ATP-binding protein" FT /function="ATPase components of ABC transporters with FT duplicated ATPase domains" FT /note="ABC transporter related, ABC transporter, FT specificity unclear" FT /db_xref="GOA:Q931C7" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q931C7" FT /protein_id="AAK64675.1" FT /translation="MIRIENISKSNSHRILYIEASAALNRGEKIGLVGPNGAGKTTLFR FT MITGQELPDEGQVAVEKGMTIGYFDQDVGEMAGRSAVAEVMEGAGPISAVAAELHELET FT AMSDPDRMDEMDAIVERYGEVQARYEELDGYALEGRAREVLAGLSFSQEMMDGDVAKLS FT GGWKMRVALARILLMRPDVMLLDEPSNHLDLESLIWLENFLKGYDGALLMTSHDREFMN FT RIVTKIIEIDGGALTTYSGDYGFYDEQRALNARQQQAQFERQQAMLAKEIKFIERFKAR FT ASHASQVQSRVKKLEKIDRVEPPRRRQTVAFEFLPAPRSGEDVVNLKSVHKTYGSRTIY FT DGLDFMVRRRERWCIMGINGAGKSTLLKLVTGTTNPDKGSVSLGASVKLGYFAQHSMDL FT LDGESTILQWLEERFPKAGQAPLRALAGCFGFSGDDVEKRCRVLSGGEKARLVMAAMLF FT DPPNFLVLDEPTNHLDLDTKEMLIKALSAYQGTMLFVSHDRRFLSALSNRVLELTPDGI FT NQYGGGYSEYVERTGQEAPGLRG" FT gene complement(23398..24297) FT /locus_tag="SMa0039" FT CDS complement(23398..24297) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0039" FT /product="Transcriptional regulator, LysR family" FT /note="Family membership" FT /db_xref="GOA:Q931C6" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q931C6" FT /protein_id="AAK64676.2" FT /translation="MDRLTSMAVFVKAVDLGSFAAAAEALGLSGPMVGKHVRSLEDRLG FT VQLINRTTRRQSLTEFGYVYYERCRVVLAEAQAADALASDQLSEPRGKLRVTMPVHFGR FT HCVTPVLLELARKYPALELDLSFNDRIIDLAEDGFDLSIRTGVLEDRAGLIARRVARQP FT MIVCASPSYLESHGCPEAPEDLAQHAAVVYRRSGPVSPWLFPRPGQSSSEVTPLHRFRL FT DDLDAIADAAARGLGLAWLPYWLVRGRIEAGTLVRLLPEQPPFLYDCHAVWLQTPHLPL FT KVRVAVDALAAQLPSFMT" FT gene 24399..25388 FT /locus_tag="SMa0041" FT CDS 24399..25388 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0041" FT /product="zinc dependent oxidoreductase-releated quinone FT oxidoreductase" FT /note="Family membership" FT /db_xref="GOA:Q931C5" FT /db_xref="InterPro:IPR018212" FT /db_xref="UniProtKB/TrEMBL:Q931C5" FT /protein_id="AAK64677.2" FT /translation="MARVVRFHELGGPEVLRIEDVHVPEPGPHEVRIRVKALGLNRAEA FT LLRSGAYIETATFPSGLGLEAAGFVEKVGPGVQGFIPGDPVSVLPPKSMIRWPAYGELA FT IFPAALLVRHPPSLSFEEAAAVWMQYLTAYGGLVDIGGLRRGDFVAITAASSSVGLAAI FT QIANMVGAIPVAVTRTSAKRQGLLEAGAAHVIASMEEDLEAQLKRVSGQHGIRVVFDPV FT GGPIFEPLAAAMAWGGILVEYGGLSPEKTPFPLFAVLSKSLTLRGYLVHELLADPGRLE FT RAKAFILDGLVSGALRPIIARAFPFDQIVEAHRFLESNEQFGKIVVTV" FT gene complement(25417..25683) FT /locus_tag="SMa0044" FT CDS complement(25417..25683) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0044" FT /product="conserved hypothetical protein" FT /note="similarity to Mesorhizobium loti msr7471" FT /db_xref="InterPro:IPR018735" FT /db_xref="UniProtKB/TrEMBL:Q931C4" FT /protein_id="AAK64678.1" FT /translation="MCRNIKPLFNFDPPATDEEVRDAALQFVRKLSGTTKPSERNEAAF FT ERAVDSIAACARELLDALETSQPPRNREEVAARARERSAMRFA" FT gene complement(25848..26597) FT /gene="cah" FT /locus_tag="SMa0045" FT CDS complement(25848..26597) FT /codon_start=1 FT /transl_table=11 FT /gene="cah" FT /locus_tag="SMa0045" FT /function="Carbonic anhydrase" FT /EC_number="4.2.1.1" FT /note="Carbonic anhydrase II (Carbonate dehydratase II) FT (CA-II), Carbonic anhydrase, eukaryotic, Eukaryotic-type FT carbonic anhydrase, high confidence in function and FT specificity" FT /db_xref="GOA:Q931C3" FT /db_xref="HSSP:1KOQ" FT /db_xref="InterPro:IPR006311" FT /db_xref="UniProtKB/TrEMBL:Q931C3" FT /protein_id="AAK64679.1" FT /translation="MERRDFLRGLALLAACPLCVKTAYAAEGVHWRYEGEEGPEHWGSL FT AKENSACSAGSQQSPIDIRGAVKADIPELTADWKSGGTILNNGHTIQVNAAGGTLRRGD FT KSYDLVQYHFHSPSEHFVDGKSFPMEAHFVHKNAETGTLGVLGVFLVPGAANSTFASLA FT EKFPRNPGEESPLITIDPKGLLPSSLSYWTYEGSLTTPPCSEIVDWMVAMEAVEVDPGD FT IKKFTALYSMNARPALAGNRRYVLSSS" FT gene 26906..27154 FT /locus_tag="SMa5015" FT CDS 26906..27154 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa5015" FT /product="hypothetical protein" FT /note="Similar to an approximately 75 amino acid-central FT region of GntR-family transcriptional regulators; Possible FT ORF fragment" FT /db_xref="UniProtKB/TrEMBL:B3KLW1" FT /protein_id="ACF07959.1" FT /translation="MVPEVLRHLESESLVANLPNKGPIVSRLDLNEAKQIDQIRVAVGG FT RATVRGAARPAIVEALEASFKGIRECYASRLRRAPAT" FT gene 27295..27516 FT /locus_tag="SMa0050" FT CDS 27295..27516 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0050" FT /product="hypothetical protein" FT /note="Has similarity to small region found in FT dehydrogenases; Together with adjacent ORF, SMa0052, may FT comprise a pseudogene" FT /db_xref="GOA:Q931C1" FT /db_xref="InterPro:IPR016163" FT /db_xref="UniProtKB/TrEMBL:Q931C1" FT /protein_id="AAK64681.1" FT /translation="MQVGFYDDFAERLAAKVRKMKVDNGFEPGADTGPLISQKALARVQ FT EHISDAVAKGRECGLFFEPTVLMGGRWR" FT gene 27507..27713 FT /locus_tag="SMa0052" FT CDS 27507..27713 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0052" FT /product="hypothetical protein" FT /note="Has similarity to small region found in FT dehydrogenases; Together with adjacent ORF, SMa0050,may FT comprise a pseudogene" FT /db_xref="GOA:Q931C0" FT /db_xref="HSSP:1BPW" FT /db_xref="InterPro:IPR016163" FT /db_xref="UniProtKB/TrEMBL:Q931C0" FT /protein_id="AAK64682.1" FT /translation="MEMKVARGNFGPVASLFKFSTEEAVFEMANNTEFGLASYFYSKDI FT SKIFRVPEALEYGMVGINAGLIH" FT gene complement(28295..29428) FT /locus_tag="SMa0056" FT CDS complement(28295..29428) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0056" FT /product="dehydratase/enolase" FT /note="Good similarity to racemases, enolases and FT dehydratases in the first 283 amino acids, but not across FT the entire length of the predicted protein, family FT membership" FT /db_xref="GOA:Q931B9" FT /db_xref="HSSP:1BQG" FT /db_xref="InterPro:IPR001354" FT /db_xref="UniProtKB/TrEMBL:Q931B9" FT /protein_id="AAK64683.1" FT /translation="MKRPRITDIRATTVTVPLEAPLRHSNGAHWGRFVRTIVEVETDVG FT IVGLGEMGGGGESAEAAFRALKPYLLGHDTFELENLRFMICNPTASLYNNRTQMHAAIE FT FACLDIMGKFLGVPVCDLLGGKMRDAVPFASYMFFRLPNKDTGEGETRTADQLIEQTLA FT LKKKCGFTSHKLKSGVFPPDYELEVFRAWAKALGPDSVRYDPNAAFSVEEAIRFAKGIE FT DLNNDYYEDPTWGLNGMRRVRENTTMPLATNTVVVNFEQLATNILNPAVDVILLDTTFW FT GGSALREGGGRLRDLPTRHCGTFVGRTRHPARHHASPRRGSPEPRLPRGCALSPTHGRY FT HRRRPDALRERHYQGADGAGSRGGARSRQARAVRRPP" FT gene complement(29492..30688) FT /locus_tag="SMa0058" FT CDS complement(29492..30688) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0058" FT /product="N-acylglucosamine 2-epimerase family protein" FT /function="Highly conserved protein containing a FT thioredoxin domain" FT /EC_number="5.-.-.-" FT /note="Glycoside transferase, six-hairpin, N- FT acylglucosamine 2-epimerase (GlcNAc 2-epimerase), family FT membership" FT /db_xref="GOA:Q931B8" FT /db_xref="InterPro:IPR010819" FT /db_xref="UniProtKB/TrEMBL:Q931B8" FT /protein_id="AAK64684.1" FT /translation="MKPIPDFRSKDFLLAHMREIMDFYHPICLNEEDGGYYNEYRDDGF FT ITDRKTQHLVSTTRFIFNYATAAVLFERPDFAEAAAHGVRYLDEVHRDPEHGGYYWLMR FT GRDAVDATKHCYGHAFVLLAYATAMKAGIPGTGARVSQTWDLLENRFWEPDRELYKDEV FT SRDWGATSPYRGQNANMHMTEAMLAAYEATGEIRYLDRAETLARRICVELAANTQDVVW FT EHYRQDWSVDWDYNKDDPKHLFRPYGYQPGHMTEWTKLLLILERYRPQDWLLPKALLLY FT ETALAKSADLEFGGMHYSYGPEGKLYDLDKYHWVHCETIAAAAALAGRTGRERYWQDYD FT RLWRYSWRHLIDHEYGCWFRILSPDGVKQSDIKSPSGKTDYHPFGACYEILRVLGEAQ" FT gene complement(30703..31488) FT /locus_tag="SMa0059" FT CDS complement(30703..31488) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0059" FT /product="short chain alcohol dehydrogenase-related FT dehydrogenase" FT /note="Specificity unclear" FT /db_xref="GOA:Q931B7" FT /db_xref="HSSP:1G0N" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q931B7" FT /protein_id="AAK64685.1" FT /translation="MSDFNGKSIVVTGGSLGMGLACAHRFAAGGGKVTIVANDKASVDE FT AVTSIGDNAAGFVGDVRSKADMNAAVQAAVSRHGGVDILACCAGIQRYGTVVDTADEVW FT DDVLDINLKGIFLASKFAIPEMRKRGGGAIVAISSVQAYASQTGVAAYTASKGAINALV FT RAMALDHAGDNITVNAVCPASIDTPMLRWAADLWKGEGTVEATLETWGKGHPLGRVGKP FT SEVAELVAFLASEKARFITGADIKIDGGVLSKLGIVIPD" FT gene complement(31488..32423) FT /locus_tag="SMa0060" FT CDS complement(31488..32423) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0060" FT /product="gluconolactonase/regucalcin homolog" FT /note="Similar to gluconolactonases and to senescence FT marker protein 30/regucalcin; May bind calcium ions; Is FT similar to the carboxy-terminus of S; meliloti SMa0717, FT function unclear" FT /db_xref="InterPro:IPR005511" FT /db_xref="UniProtKB/TrEMBL:Q931B6" FT /protein_id="AAK64686.1" FT /translation="MSATVSLLLDAKDIVGESILWCGDEKALYWVDIVGKRIHRLEPEN FT GRHDTWPTPDFVTSIGMRKDGGFIVGLSRNVCLWTPDGPFEEFAMPEPDLPENRLNEGR FT VAPDGSFWVATMQSNLDAGGSPKDMDRQSGAVYRIDPTGHVSQLTPNEYGITNTMGWTR FT DNRFFFADTLANEIYMFDCDLAARRIDNRRTIVAGFARGLPDGSCLDADDRLWNCRVAG FT GAAVAGFDGAGRLMHLIELPASWPTSCTFGGPVLSTLYVTSARFTMTGDHLDMHPLEGG FT LFAVEGVGHGVEEPKFGQAPDKFPSVSEIA" FT gene 32634..33323 FT /locus_tag="SMa0062" FT CDS 32634..33323 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0062" FT /product="Transcriptional regulator, GntR family" FT /function="Transcriptional regulators" FT /note="GntR, C-terminal, Bacterial regulatory proteins, FT gntR family, conserved hypothetical protein" FT /db_xref="GOA:Q931B5" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q931B5" FT /protein_id="AAK64687.1" FT /translation="MTRDIKISAAEHCYRTLSRKIIGLELKPNEPIGEHALAGLLGVSR FT TPVREALSRLSAEGLVDLRSRAGVVVAPIRMDAVRTAQFVREQLELAIVAEAAQQSNRR FT VLLGIRQAIEEQELAILEDNPDLFFECDERMHALYCSLAGRDGVWAFISDAKKHMDRVR FT RLSIQAGQLDQLVEDHRRVLKAVGEGDATKAQEIMRLHLRRAVVDLGELSQRFSSYFAL FT DAAGDAR" FT gene 33453..34187 FT /locus_tag="SMa0063" FT CDS 33453..34187 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0063" FT /product="Transcriptional regulator, GntR family" FT /note="Family membership" FT /db_xref="GOA:Q931B4" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q931B4" FT /protein_id="AAK64688.2" FT /translation="MIELKAEEQSSSGRSGAEGLLGGVMTAVKTHIRENGLQVGDSLPS FT EGTFAEKLGVSRSVVREAYRSLAALTLIDIGNGRRPRVAAPKADVLALVTDHAVHTDQV FT TIQQIFDVRRTVERRTVVLAAMRRTDKEAAEIVALAEAMQRDFDQPVRVMEHDIAFHEA FT IGRASRNPMFALIVGSFHVVTRHTWPIGWASRGSNETRQESIDGHMTIAQAIANGDPAK FT GEEAMVEHFDLTVKALLAAGVY" FT gene 34190..35392 FT /locus_tag="SMa0064" FT CDS 34190..35392 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0064" FT /product="dehydratase/enolase" FT /note="Specificity unclear" FT /db_xref="GOA:Q931B3" FT /db_xref="InterPro:IPR001354" FT /db_xref="UniProtKB/TrEMBL:Q931B3" FT /protein_id="AAK64689.2" FT /translation="MKITELETVRVRDFPNILWVRIHTDEGLVGLGETFFMAQTVETYI FT HEVVAPKLVGRDPLEIDRISKDLTGYLGFRSTGAEMRGNSAVDIGLWDLFGKATNLPIA FT QLLGGFSRREIRTYNTCAGNTYMRDAKGQQTANYGIGGPRRDYDDLNGFLERADELAED FT LLSEGITAMKIWPFDIAAEKSGGQYISGPDLRKALEPFEKIRKRVGDRIDIMVEFHSMW FT QLTPAIQIARALEPYATFWHEDPIKMDSLSSLKRYAAASRAPLCASETLATRWAFRDLM FT ETDAAGVVMLDLSWCGGISEAKKISTMAEAWHLPVAPHDCTGPVVLAASTHLSLNAPNA FT LVQESVRAYYKTWYADLTTQLPTVTNGMITIPPGAGHGVDLAPDLDRKFEVSRRSSQIE FT D" FT gene 35455..36147 FT /locus_tag="SMa0065" FT CDS 35455..36147 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0065" FT /product="Transcriptional regulator, GntR family" FT /note="Family membership" FT /db_xref="GOA:Q931B2" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q931B2" FT /protein_id="AAK64690.1" FT /translation="MQNIKPQRVLSAIEAVGPQVYRILREQIIQAELVPGARISEAEIA FT RSLSISRQPVREAFIKLAEEGLVQVLPQRGTYVTRISTASVMDVRFVREAIEADIVRQV FT AGEHPAAIVDELREQIARQKQVPHDDRAAFLRLDELFHHTLATAAGRAHAWSVIESVKA FT QMDRVRFLSVDDLQIGRLIEQHERIVDAIAARDVGGAEQALRMHLREILKSLPEIARSR FT EEFFDGTG" FT gene 36205..37167 FT /locus_tag="SMa0067" FT CDS 36205..37167 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0067" FT /product="ABC transporter, periplasmic solute-binding FT protein" FT /note="Expression of SMa0067 is induced by ribose and FT mannose, high confidence in function and specificity" FT /db_xref="UniProtKB/TrEMBL:Q931B1" FT /protein_id="AAK64691.1" FT /translation="MIAGTALGLTLMAPAASAEGLSIAFISHSSASNTFWQAVKKGYDD FT ACEKVGASCQLILTQTEGAVEQAVANLQAAIASRPDAIFVAIVDNNAYDNVIKEAVDAG FT ILVLAVNVDDSEGAKGNARKAFIGQGFTAAGYSLAKAQSENFPKDGPLNLLVGVNAPGQ FT TWSEQRAGGVTKFLEEYKAEHSDREVNITRIDSATDLALTADRIGAYLNANPDTAAYFD FT TGYWHAGVAKVLKDRGIEPGKVLLGGFDLVPEVLQQMEAGYVQVQVDQQPYMQGFIPVM FT QAYLWKTAGLTPSDVDTGQGIVTPKDVPTILELAKQGLR" FT gene 37353..38336 FT /locus_tag="SMa0070" FT CDS 37353..38336 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0070" FT /product="ABC transporter permease" FT /note="Specificity unclear" FT /db_xref="GOA:Q931B0" FT /db_xref="InterPro:IPR001851" FT /db_xref="UniProtKB/TrEMBL:Q931B0" FT /protein_id="AAK64692.1" FT /translation="MKRFLKIYLDKPELAGLALLFVLVLVFQAKSNGILLSFENMRGVM FT GLLPEMALVAIGVTLLMICGEFDLSVGSVFALMPMSMAVLLNSGVPFTVAVLLGLMICG FT AIGFINGYVTLQFSIPSFITTLGMLFIARSLTIVISGGFPPLLPPDLPTWLFTDYIWQG FT SPFRMSFLWFVVIAALVAALLSLTNFGNWIRATGGFNEAAASMGIPVKRVKIVCFMLCS FT VLAGFAGLLQVLRLGSPLPSIGEGLELQAVAAAVIGGTALAGGIGTVFGAIIGTLLIRT FT IDNGLVLSRVDANWFKFAIGVLTMFAVIANAWMGKMSRKIKVEAHK" FT gene 38333..39064 FT /locus_tag="SMa0072" FT CDS 38333..39064 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0072" FT /product="ABC transporter, ATP-binding protein" FT /note="Specificity unclear" FT /db_xref="GOA:Q931A9" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q931A9" FT /protein_id="AAK64693.1" FT /translation="MTTPIIECRNLQKWYSGVHALKNVDLTIHPGETVGLVGDNGAGKS FT TLIKILSGVHHQDSGDVLIEGRRVALRSPKDAMRYGLETIYQYNSMVPTMSIARNLFIG FT REPMKWSVFGVGIMDQKRMRVESIQAIADVDLHLRSPDALVGELSGGQRQGVAIARAMH FT FKSKVLILDEPTNHLSVKETDKVIGFVRGLKAQGLTGIFISHNMQHVFQSCDRIVAMAR FT GEIVFDKPTADTSIDEVHALL" FT gene 39072..39830 FT /locus_tag="SMa0074" FT CDS 39072..39830 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0074" FT /product="short chain alcohol dehydrogenase-related FT dehydrogenase" FT /note="Family membership" FT /db_xref="GOA:Q931A8" FT /db_xref="HSSP:1E7W" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q931A8" FT /protein_id="AAK64694.1" FT /translation="MTELSGKTILITGALGTLGRAQAERLGRAGAGLLLLLDRPGAEAG FT EGFAASLAAAHETMAIYVGEDLNNLASAEKRAATLSSEHGGIDILINNAALIINKPFEE FT FSLEEYEDQVRVNSSAAFALARAVTPGMKQKRYGKIVNFCSLTLNGRWDGYVPYVASKG FT AMLGLTKALARELGPHGVRVNAVSPGAVVSEAEERVFADRLQQYNDWIVENQSLKARIQ FT PSDVADLVHFLVSPASDMISGQNIAIDGGW" FT gene 39830..40717 FT /locus_tag="SMa0077" FT CDS 39830..40717 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0077" FT /product="conserved hypothetical protein" FT /function="Galactose mutarotase and related enzymes" FT /note="Weak similarity to E; coli GalM (Aldose 1- FT epimerase)" FT /db_xref="GOA:Q931A7" FT /db_xref="InterPro:IPR014718" FT /db_xref="UniProtKB/TrEMBL:Q931A7" FT /protein_id="AAK64695.1" FT /translation="MPAIELSNGEARLLARPDLGAGLTAFDVLHDGVWQAIFRRVDPST FT AHPFALSNILLVPFSGRVSGGGFTFDGTFHALPRNVETELYPIHGNGFSAAWDVASLSA FT DLLTLTLSAEGPGPFRYDATMSYRLQGAGLLMELSLVNRARIRLPYGAGFHPWFVREPD FT TTLHAPARGVWLEQSDHLPKAHDAIAAQADLDFNRPKPLPARWINNWFDGWDGKARIHW FT PSRGLAVDVDASEGLRQYVVFSPAAAADFFCFEPVTHPVDAFNLPGKAEAHGLKILEPD FT ESLAVSARVAADFG" FT gene 40959..41981 FT /locus_tag="SMa0078" FT CDS 40959..41981 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0078" FT /product="Transcriptional regulator, LacI family" FT /function="Transcriptional regulators" FT /note="Periplasmic binding protein/LacI transcriptional FT regulator, Periplasmic binding proteins and sugar binding FT domain of the LacI family, ccpA: catabolite control FT protein, family membership" FT /db_xref="GOA:Q931A6" FT /db_xref="HSSP:1LCC" FT /db_xref="InterPro:IPR001761" FT /db_xref="UniProtKB/TrEMBL:Q931A6" FT /protein_id="AAK64696.1" FT /translation="MSSQERKKSRVTLLDVARHASVSRATASLVLRKSPLVGSETRARV FT EQAMRDLGYVYNIGAARLRVERSQIIGAIVPNLTNPFFAELLSGIEEAIGATGKVVILA FT NSGERVERQSMLLQRMREHGVDGVVLCPAAGTEPDLSEQLAAWGMPVVQVLRHISVDMD FT YVGVDYAGGMRQAVDYLASLGHEKIAFAVHGPFHSAYRERVDGFRDAMLAKAFDPEILI FT HLPAQLGEIADSTHLLFAKATQPTAVICFNHLVALGLAAGLHDCGLTIGRDLSLIGFDD FT VADAEAIRPRLTSVSTGPTAIGEMAARLLVERIANPDLPPRRVVNDTTLSVRQSCGRPA FT " FT gene 42106..42774 FT /locus_tag="SMa0079" FT CDS 42106..42774 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0079" FT /product="ABC transporter, permease" FT /function="ABC-type amino acid transport system, permease FT component" FT /note="Binding-protein-dependent transport systems inner FT membrane component, Binding-protein-dependent transport FT system inner membrane component, HEQRo_perm_3TM: amino acid FT ABC transporter, permease protein, 3-TM region, FT His/Glu/Gln/Arg/opine family, specificity unclear" FT /db_xref="GOA:Q931A5" FT /db_xref="InterPro:IPR010065" FT /db_xref="UniProtKB/TrEMBL:Q931A5" FT /protein_id="AAK64697.1" FT /translation="MYEFNFAPVLASFDQLLVGAWLTVRLSCAAMLIGLVVSVFCAWGK FT TAGPAILRHVIDGYIEIIRNTPFLVQIFFIFFGMPSLGLRLSPNSAALLALVVNFGAYG FT TEIIRAGIESIHKGQVEAGWALGLSRPQIFRYVVMKPALRTVYPALTSQFIYLMLNTSV FT VSVISADDLAAAGNDLQSATFASFEVYIAVTLIYLALSVGFSALFYALEKAAFKYPLGR FT " FT gene 42785..43441 FT /locus_tag="SMa0081" FT CDS 42785..43441 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0081" FT /product="ABC transporter, permease" FT /function="ABC-type amino acid transport system, permease FT component" FT /note="[amino acid], Binding-protein-dependent transport FT systems inner membrane component, Binding-protein- FT dependent transport system inner membrane component, FT HEQRo_perm_3TM: amino acid ABC transporter, permease FT protein, 3-TM region, His/Glu/Gln/Arg/opine family, FT specificity unclear" FT /db_xref="GOA:Q931A4" FT /db_xref="InterPro:IPR010065" FT /db_xref="UniProtKB/TrEMBL:Q931A4" FT /protein_id="AAK64698.1" FT /translation="MIRAFGWNEFLVIVAAAQWTIALSAIAFAGGSVGGLLVALMRVSE FT TRALRLFATGFIRVFQGTPLLMQLFLVFFGMNIFGFAINPWIAATIALALHASAFLGEI FT WRGCIEAVPKGQREAATALGLRYFRSMRHVILPQAARIAVAPTVGFLVQLIKGTSLASI FT IGFTELTRQGQIINNATFSPFLVFGTVAAVYFLLCWPLSLIARRMETRFSRATAR" FT gene 43471..44286 FT /locus_tag="SMa0082" FT CDS 43471..44286 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0082" FT /product="ABC transporter, periplasmic solute-binding FT protein" FT /note="Specificity unclear" FT /db_xref="GOA:Q931A3" FT /db_xref="HSSP:1WDN" FT /db_xref="InterPro:IPR003016" FT /db_xref="UniProtKB/TrEMBL:Q931A3" FT /protein_id="AAK64699.1" FT /translation="MRREGLMNISRRIAISVLGAAIVAGLVAPAAAQTVETIKSAGTVK FT VGMLVDFPPFGIMDANNQPDGYDADVAKLLAKELGVEVTIVPVTGPNRIPYLQSNQVDL FT LVASLGITEERAKNVDFSQPYAGISIGVFGAADLAVTKPEDLAGKTIGVARASTQDTAT FT TKIAPQDANIQRFDDDASAVQALLSGQVELIGVSNVVAAQIEAAAPGRFNQKLQLSQQV FT QGIAVRKGSSEMLKFVNGFLDKVKADGQLNAIHEKWLGSPLPEFVTEAK" FT gene 44302..45081 FT /locus_tag="SMa0083" FT CDS 44302..45081 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0083" FT /product="ABC transporter, ATP-binding protein" FT /note="ABC transporter, specificity unclear" FT /db_xref="GOA:Q931A2" FT /db_xref="HSSP:1B0U" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q931A2" FT /protein_id="AAK64700.1" FT /translation="MNTEREYASPPDSREALDPAVRMEGVNKWYDAFHALKNIDLTVGR FT GERIVICGPSGSGKSTLIRCINQLETIHSGRIVVDGHDLTAGGRNVDLVRQETGMVFQQ FT FNLFPHMTVLENCTLAPMKVRGLAKAEAEETAMKYLKRVRIPEQAVKYPAQLSGGQQQR FT VAIARALCMNPKIMLFDEPTSALDPEMVKEVLDTMVDLANEGMTMLCVTHEMGFARSVA FT DRVVFMDRGEVLEIAPPDAFFGAPQHERTRFFLGQIS" FT gene 45099..46052 FT /locus_tag="SMa0085" FT CDS 45099..46052 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0085" FT /product="dehydrogenase" FT /note="best similarity is to lactate and phosphoglycerate FT dehydrogenases, family membership" FT /db_xref="GOA:Q931A1" FT /db_xref="HSSP:1PSD" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q931A1" FT /protein_id="AAK64701.1" FT /translation="MEFRNVKPDLLLVEPMMPFVMDELQRNYSVHRLYQAADRPALEAA FT LPSIRAVATGGGAGLSNEWMEKLPSLGIIAINGVGTDKVDLARARRRNIDVTTTPGVLA FT DDVADLGIALMLAVLRRVGDGDRLVREGRWAAGEQLPLGHSPKGKRIGVLGLGQIGRAL FT ASRAEAFGMSVRYWNRSTLSGVDWIAHQSPVDLARDSDVLAVCVAASAATQNIVDASLL FT QALGPEGIVVNVARGNVVDEDALIEALKSGTIAGAGLDVFVNEPAIRSEFHTTPNTVLM FT PHQGSATVETRMAMGKLVLANLAAHFAGEKAPNTVN" FT gene 46069..46401 FT /locus_tag="SMa0087" FT CDS 46069..46401 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0087" FT /product="conserved hypothetical protein" FT /note="Similar to SMa0518 of S; meliloti & Atu4686 of A; FT tumefaciens" FT /db_xref="InterPro:IPR009799" FT /db_xref="UniProtKB/TrEMBL:Q931A0" FT /protein_id="AAK64702.1" FT /translation="MIVRQALFEGTIRPGREQAFRGYVEEKLVPLWRAFPGVREVRVLH FT AVDRDEGAPAFAMILSTTYDDREALARALASPVRYESRELTKGLLEMFEGHIHHHVFDL FT DARSTA" FT gene 46684..47100 FT /locus_tag="SMa0089" FT CDS 46684..47100 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0089" FT /product="conserved hypothetical protein" FT /note="predicted by Pfam & InterPro to have an FT Endoribonuclease L-PSP domain" FT /db_xref="HSSP:1PF5" FT /db_xref="InterPro:IPR006175" FT /db_xref="UniProtKB/TrEMBL:Q930Z9" FT /protein_id="AAK64703.1" FT /translation="MKRNEQMTRRDAVFPANRHALYEAHGYSAAIRSGDLLFVSGQVGS FT RSDGSPEPDFGRQVQLAFDNLRATLNAAGCTFDDIVDVTTFHTDPENQFETIMAVKNQV FT FGTPPYPNWTALGVNWLAGFDFEIKVIARIPEAA" FT gene 47225..47920 FT /locus_tag="SMa0091" FT CDS 47225..47920 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0091" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR012413" FT /db_xref="UniProtKB/TrEMBL:Q930Z8" FT /protein_id="AAK64704.1" FT /translation="MKTALAVFGGFVLSLALFLSGAVVAVLFLTGKPARQPQLDVNQSE FT VWTKQPRAVDRTAQQFERLPARPAPSDVNASREPETPAMANEAEKERSPEPLDRMATAS FT IQSPPAEEEPTASTVPAAHAEWCARRYRSYRPFDNTYRSFSGGRRSCNSPYMDAAWGPS FT EDPSPVPRGIDAEDADDPSTQMEYSAGDGEAIRLTQEHVAYCFSRYRSYRPEDNSYQPY FT SGGPRRQCR" FT gene 48182..49033 FT /locus_tag="SMa0093" FT CDS 48182..49033 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0093" FT /product="Branched-chain amino acid aminotransferase" FT /function="Branched-chain amino acid aminotransferase/4- FT amino-4-deoxychorismate lyase" FT /EC_number="2.6.1.21" FT /note="D-alanine aminotransferase (D-aspartate FT aminotransferase) (D-amino acid aminotransferase) (D-amino FT acid transaminase) (DAAT), Aminotransferase, class IV, FT Aminotransferase class IV, D_amino_aminoT: D-amino acid FT aminotransferase, family membership" FT /db_xref="GOA:Q930Z7" FT /db_xref="HSSP:1DAA" FT /db_xref="InterPro:IPR001544" FT /db_xref="UniProtKB/TrEMBL:Q930Z7" FT /protein_id="AAK64705.1" FT /translation="MGRIVYVHGQFVPEEEARIGLFDRGFLFGDAVYEVTAVIGGRMID FT NDLHLGRLERSLRELAIPLGLSRKEIAGVQAELIARNALLDGTVYLQVSRGEADRDFLY FT SDALAPRLVGFTQAKTLTGTKAQQDGISVDLADDPRWHRRDIKTAMLLGQVMAKQAARA FT RGFDDVWLVENGLVTEGASSTAHVITGDGRILTRAASRATLPGCTQRALALLCAAEDLA FT IEERAFTPNEAQAAAEAFQTSASSLVMPVVRIGERVVGNGKPGPMTRKLQALYLEAAGV FT PV" FT gene 49084..50121 FT /locus_tag="SMa0095" FT CDS 49084..50121 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0095" FT /product="D-aminopeptidase" FT /function="L-aminopeptidase/D-esterase" FT /EC_number="3.4.11.19" FT /note="Peptidase S58, DmpA, Peptidase family T4, family FT membership" FT /db_xref="GOA:Q930Z6" FT /db_xref="HSSP:1B65" FT /db_xref="InterPro:IPR005321" FT /db_xref="UniProtKB/TrEMBL:Q930Z6" FT /protein_id="AAK64706.1" FT /translation="MKTARELGLIPQGRLEPGPGNAITDVAGVSVGHRSLRGEGLFTGV FT TAILPHAGDVFRVKPRAAVEVINGFGKSAGLMQVAEIGTIETPIVLTNTFGVAACTEAL FT VRRAISANPAIGRKTSTVNALVCECNDGSINDIQALAVTPADAEAALDAARTGPVEQGA FT VGAGSGMTAFGFKAGIGTASRRMRVGKRDFTLGTLVLANFGAAGDLVLPDGRRPDPRVP FT AGPERGSVIVVMATDLPLADRQLQRVARRAGAGLARLGAFWGHGSGDVALCFTTADPVE FT HEPATAFTTQERLADGHIDIAFRAAADTTQEAVLNALCMAPAMPARNGRIYPCLADWLM FT ENPSP" FT gene complement(50138..51079) FT /locus_tag="SMa0097" FT CDS complement(50138..51079) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0097" FT /product="Transcriptional regulator, LysR family" FT /note="Family membership" FT /db_xref="GOA:Q930Z5" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q930Z5" FT /protein_id="AAK64707.1" FT /translation="MEIKWLEDFVTLADTSSFSRAAELRNVTQPAFSRRIKQLESWLGA FT TLISRATMPAELTPAGRNFLPVAQEAIRTFYAAREVLRLPHEPGLIRFAALHTLTVTFF FT PRWLKTLEAAGGSFSTSLIPDRGGIEANLDALVGDEADFFLTYAHPEVPFHLDSGQFSS FT LTVAHDRLIPLVAAEIVLSGDPQPGLNLLDRAIAQPRLAIPYLSYGFNSFFGVALSRLL FT LRRPPFRRRTTHENTISAGLMNMAVTGAGVCWLPESLAREEIDARRLVPASADEGWNLD FT LEIRLYRHAASRNRKVEELWATAQRLLEPAPA" FT gene 51262..52887 FT /locus_tag="SMa0101" FT CDS 51262..52887 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0101" FT /product="Amidohydrolase" FT /function="Predicted metal-dependent hydrolase with the FT TIM-barrel fold" FT /note="May be involved in metabolism of lysine, ectoine, FT and asparagine; Expression of SMa0101, is induced by FT lysine, ectoine, and asparagine, family membership" FT /db_xref="GOA:Q930Z4" FT /db_xref="InterPro:IPR013108" FT /db_xref="UniProtKB/TrEMBL:Q930Z4" FT /protein_id="AAK64708.1" FT /translation="MAFGIKADLILINGRIWRGREEGISEALAVWQGKILATGSDTDIL FT GLKGPRTEVIDLEGRFATPGLIDNHLHLIATGMAMGWVDATPASAPTLAALMGRISDRA FT ATTPKGGWVRARGYDQVKLDTGRHPTRDDLDRVAPDHPVLLTRACGHVSIANSRALELA FT GITEATAVPEGGVIGVTEGRLNGFLAENAQNLVKAAMPSATTEDLIDGIERAGRYLLSF FT GITSCMDAAVGQVSGFAEIQAYEMAKLSGRLPVRVWLTLLGDPGVSIVEDCWRAGLLSG FT AGDDMLRVGGVKVFLDGSAGGRTAWMTRPYRGEPDNIGVQMLPDAEVEAVVKACHDRGY FT QMVCHAIGDGAIEQLITAYEKALAANPDPDRRHRVEHCGFSTPDQNARMKAAGILPAPQ FT MAFIHDFGDSYISVLGEERGRLSYPIGTWMRMGLKPSTGSDSPVCSPDPFPNLHAMLTR FT QTGKGTVMEASERLSRQEALQTYTEYGAYSQKAEGVKGRLVPGQWADIAVFDNDLLAAP FT PETILSDTSCVLTLLAGRVVHDAR" FT gene 52944..54536 FT /locus_tag="SMa0104" FT CDS 52944..54536 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0104" FT /product="ABC transporter, periplasmic solute-binding FT protein" FT /note="Likely involved in transport of lysine, ectoine, and FT asparagine, high confidence in function and specificity" FT /db_xref="GOA:Q930Z3" FT /db_xref="InterPro:IPR000914" FT /db_xref="UniProtKB/TrEMBL:Q930Z3" FT /protein_id="AAK64709.1" FT /translation="MLKRLTLAAMLSLGVAAGALAAGERHGGTLVFTAPYGSSFATLDV FT QSSPNTQEEFITQAIHRALYSWDSNQNKPVLELATSEEVSEDGKVHTYHLRKNAVFHNG FT KPLTADDIIYSYKRIANPENAFPGASFIAVIKGAEDYIAGKADEISGLKKIDDHTLEIT FT YTGTINPGFPLMQNTTVIYPSNVEGESTFGKNPVGLGAFVFKEHVPGSQVVVEKFDKYY FT EEGRPYLDRINIVLMAEDAARDVAFRNKEIDVSILGPTQYQAYQGEEGLKDHLLEVAEV FT YTRNIGFNPAFEPFKDKRVRQAINHAINAPLIIERLVKNKAYPASGWLPISSPAFDKDK FT APYAYDPEKAKALLAEAGYADGFEFEVTASPNESWGVPIVEAILPMLKKVGITVKPKPV FT ESSTLGEAVTTNNFQAFIWSNLSGPDPLNALRCYYSKTAQSACNYTSYASPEFDKLYEA FT AQQERDSAKQNDLLRQANNIVQDDAPVWFFNYNKAVMAYQPWIHGLVPNATELAIQPYD FT EIWIDETAPSSRQ" FT gene 54624..55559 FT /locus_tag="SMa0105" FT CDS 54624..55559 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0105" FT /product="ABC transporter, permease" FT /note="Likely involved in transport of lysine, ectoine, and FT asparagine, high confidence in function and specificity" FT /db_xref="GOA:Q930Z2" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:Q930Z2" FT /protein_id="AAK64710.1" FT /translation="MLRFTLRRVLQIIPTVVVVALLIFVIFSVVPGTFAASLFADGRRA FT ADPQMIARLNEEFGLNKPLMERFVTYVTDLAQFDLGTSFRTRQPVIDLINDRMWASLQL FT AIAAMIFALVISVPLGFVAALRPGSVLDTVTMIGAVSGLSMPQFWLGLLMMYLFALQLN FT WLPSFGYGDGSFRNLILPAVTLGVTPLALLARTTRAGVLDVLNADFIRTAHSKGMSEAK FT VVRWHVARNALVLIVTTVGLQFGSLIGQAVVIEKLFAWPGIGSLLVDSVASRDIPVVQG FT TILVIVLWFLVINTAVDLIYAAIDPRIKQE" FT gene 55565..56386 FT /locus_tag="SMa0106" FT CDS 55565..56386 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0106" FT /product="ABC transporter, permease" FT /note="Likely involved in transport of lysine, ectoine, and FT asparagine, high confidence in function and specificity" FT /db_xref="GOA:Q930Z1" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:Q930Z1" FT /protein_id="AAK64711.1" FT /translation="MRLGFNFWLGAGLTTLVILAGILAPWIAPFDPVLDADLMNSELPP FT DATFWFGTDGQGRDVYTRILYGAQISLTVGIVSQVINSIIGVTLGMTAGYWGGWWDDLV FT NGFTNVMLAIPSLIFALAVMAVLGPGLPSLLIALGLTNWSWTCRIARSSTLSLKSLGYV FT QAAQTLGYGDLRIMFTQILPNMMGPILVMATLGMGSAVLSEAALSFLGLGIQPPFPSWG FT SMLTDARQLIQLAPWVAIFPGLAIFLSVLGFNLLGDGLRDSLDPHMRTRNP" FT gene 56383..57297 FT /locus_tag="SMa0108" FT CDS 56383..57297 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0108" FT /product="ABC transporter, ATP-binding protein" FT /note="Likely involved in transport of lysine, ectoine, and FT asparagine, high confidence in function and specificity" FT /db_xref="GOA:Q930Z0" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q930Z0" FT /protein_id="AAK64712.1" FT /translation="MTEPLLDIRDLHLGIAVGRSVNRPLLKGVSFQIMPGEAYGLVGES FT GSGKSVTSLAVMGLLKKPLAVSGGEILFKGQNLLELPKREMRRLRGNRIAMIFQEPMTA FT LNPLSTIGRQIAEMFVLHQGKSWDEAQKLAIEALASVRVPNPDRRARNYPHQMSGGLRQ FT RVMIAMALACNPDLLIADEPTTALDVTVQAEVLRLIKELCAERGTAVLFISHDLGVIAS FT ICQRVGVMYAGCLVEENETRALFAAPRHEYTRGLLGALPRFGSRSLHGRQRLVDIDSII FT ADRSKLIETRFIAPRGAEEGGQP" FT gene 57294..58256 FT /locus_tag="SMa0110" FT CDS 57294..58256 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0110" FT /product="ABC transporter, ATP-binding protein" FT /note="Likely involved in transport of lysine, ectoine, and FT asparagine, high confidence in function and specificity" FT /db_xref="GOA:Q930Y9" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q930Y9" FT /protein_id="AAK64713.1" FT /translation="MTDPLLEVDDLHVRFSVSGGGLLGTGRRMLHAVNGIGFSLSKGEC FT LSIVGESGCGKSTTALSVLGLQEPTEGTIRYRGQPLTGPGAPGRMQRAKAVQMVFQDPY FT ASLNPRQSVRTSLAAPLRLHGITAASEIADRIEVMLANVGLTPEQANRYPHEFSGGQRQ FT RIGIARALILEPEIVVLDEPVSALDVSIRAQIINLLLDLQEKLGLGYLMISHDLSVVEH FT MSDRVLVMFFGQVVEEGGWRDIFERPAHPYTRRLIAAIPDPDAALNPGTKDHFADVPLP FT DGRSFAVDGSTAPDVFSAPPPSELVEIAPGHRMRLVPAV" FT gene 58298..58612 FT /locus_tag="SMa5001" FT CDS 58298..58612 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa5001" FT /product="hypothetical protein" FT /note="Has weak similarity to PilT-like proteins and StbB- FT like plasmid stability proteins" FT /db_xref="UniProtKB/TrEMBL:B3KLW2" FT /protein_id="ACF07960.1" FT /translation="MRKQRVREFPRFGESELLFGIGVLPDGRRKKALTEMLDGVLELFG FT DRVLPFDIGAARCYAKLAVTARAAGKEFPTRPTDILPPLPPPGDLSSRQAIPARQSLPS FT " FT gene complement(58803..59234) FT /locus_tag="SMa0112" FT CDS complement(58803..59234) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0112" FT /product="conserved hypothetical protein" FT /note="Similar to Bll5503 of B; japonicum & to Mll1601 of FT M; loti" FT /db_xref="GOA:Q930Y8" FT /db_xref="InterPro:IPR006913" FT /db_xref="UniProtKB/TrEMBL:Q930Y8" FT /protein_id="AAK64714.1" FT /translation="MQAGGVSMTNAQCACGALRLMLNEPPQLTALCHCLACQRRTGAPF FT SANAFYSIDCVEISGVSTEYIRTAESGRKVRMHFCPTCGSTLFWKADASPSWIGVAVGS FT FADPAFAPPAMSVFERSKHKWVQLEGTVEHFQDLPIGQY" FT gene 59703..62264 FT /locus_tag="SMa0113" FT CDS 59703..62264 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0113" FT /product="Sensor histidine kinase" FT /function="FOG: PAS/PAC domain" FT /note="PAS, HWE histidine kinase, sensory_box: PAS domain FT S-box, family membership" FT /db_xref="GOA:Q930Y7" FT /db_xref="HSSP:1EW0" FT /db_xref="InterPro:IPR013767" FT /db_xref="UniProtKB/TrEMBL:Q930Y7" FT /protein_id="AAK64715.1" FT /translation="MKSRESPVYMSNVEEFPLTGRVLTEYEALITSAPTALDAIPGAVY FT VCDHEGWLVGYNAEAAELWGRQPSLSAPRERFCGSQRLFLSDGSPMDHQECPMAEAIKT FT GVSTRNAEVIIERPDGSRIFALVNIRPLRDHRGVIQGAINCFQDISQQKRIEAEVNCKS FT KDLEDFFENSAIGLHIVSAAGIILRANKAELELLGYPADEYVGRHIAEFHADAPVIGDI FT LDRLSCGEKLDRYPARLRARDGSIKHVLITSNSRFEDGKFVNTRCFTTDITSLHETENA FT WRETEERLAATYQAATIGIAESDADGRLLRVNDAFCTMLGRSREQLLNMTFLDYTHEDD FT RDEEARCYARQVSGETDTYAIRKRAVKADGTVIYLDVYSSTVRDRTGRFRYGVRVLLDV FT TEAKRMDDRRRESEQHMRDLLEALPAAVYTTDAEGRITFFNKAAVEMAGRTPQIGDKWC FT VTWRLYRPDGTYLPHDQCPMAVTLKEDRPVRGEQAVAERPDGTRVPFIPYPTPLHDVAG FT KLVGAVNMLVDISDREKAAEYAERLASIVRFSDDAIVSKDTQGIIQTWNKGAERLFGYS FT AEEVIGKPINILIPPDRQGEEPGILERIRRDEHIDHYETVRIRKDGSLIDVSLTVSPLK FT DARGRVVGASKIARDITERRRSEEHRKLLVNELNHRVKNTLATVQSLAAQTFRGVNASE FT DFGRFQSRLVALARAHDVLTRESWQGADLGEVLHATINPICVEPQQRVQASGPPLRLRP FT KMALALSMAFHELCTNAAKYGALTNDGGLIKVNWHVSNIESVSHLHLQWEEIGGPSVMV FT PARTGFGTRLLERALARELGGKVDLVFAPSGVRFHIEAPLT" FT gene 62292..62654 FT /locus_tag="SMa0114" FT CDS 62292..62654 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0114" FT /product="two-component response regulator" FT /function="Response regulators consisting of a CheY-like FT receiver domain and a winged-helix DNA-binding domain" FT /note="Response regulator receiver, family membership" FT /db_xref="GOA:Q930Y6" FT /db_xref="InterPro:IPR001789" FT /db_xref="UniProtKB/TrEMBL:Q930Y6" FT /protein_id="AAK64716.1" FT /translation="MTERRLRVLVVEDESMIAMLIEDTLCELGHEVAATASRMQEALDI FT ARKGQFDIAIIDVNLDGEPSYPVADILAERNVPFIFATGYGSKGLDTRYSNIPLLTKPF FT LDSELEAVLVQISKEV" FT gene 63200..64117 FT /locus_tag="SMa0116" FT CDS 63200..64117 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0116" FT /product="DnaJ/CbpA-type protein" FT /function="DnaJ-class molecular chaperone" FT /note="Chaperone protein dnaJ (Heat shock protein J) FT (HSP40), Heat shock protein DnaJ, N-terminal, DnaJ C FT terminal region, DnaJ_bact: chaperone protein DnaJ, family FT membership" FT /db_xref="GOA:Q930Y5" FT /db_xref="InterPro:IPR015609" FT /db_xref="UniProtKB/TrEMBL:Q930Y5" FT /protein_id="AAK64717.2" FT /translation="MTDDPYQILGVPRTGKPDEIRKAYRKRAKELHPDLHPGDKEVETK FT FKALSAAYHLLSDPEQRARFDRGEIDASGAERPQQHFYRHYADADHARRYGSAGGTGEF FT EDVSDIFADLFGQGGAGGRFKARGQDRHYHLELEFLDAVNGARRRITFPDGNTLDLAIP FT AGTRDGSTLRLRGKGTPGIAGGEPGDALIEISVRSHSVFRREGNDIEIDLPITLYEAVL FT GAKIEVPTISGRVSMTIPKGSNTGDILRLRGKGVKSQHGPAGDQRVTLKVVLPTATDPD FT LERFMETWRRSHAYDPREALGRAT" FT gene 64114..64452 FT /locus_tag="SMa0117" FT CDS 64114..64452 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0117" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q930Y4" FT /protein_id="AAK64718.1" FT /translation="MKLTERQVLEQFDIVTRKQLRQWVHSGWIVPAQGERGPSFDDVDV FT ARIRLVCELRRDMNVNDDAVPIILALLDQLYGLRRELRTIATALLEQPDEVRQQLKQAL FT LSPIGQQH" FT gene 64679..65206 FT /locus_tag="SMa0118" FT CDS 64679..65206 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0118" FT /product="hypothetical protein" FT /note="weak, partial similarity to alcohol dehydrogenase FT cytochrome c subunit" FT /db_xref="GOA:Q930Y3" FT /db_xref="InterPro:IPR009056" FT /db_xref="UniProtKB/TrEMBL:Q930Y3" FT /protein_id="AAK64719.1" FT /translation="MFRLGIGFACFATSAFGLQPLGAAADDPAIARGEYLVTMGGCNDC FT HTPGYFFGKPDSSRFLGGSDVGFEIPGEGVFIGRNITPDKETGIGSWTREQIVTAIQTG FT QRPDGRMLAPIMPWHAFAQLTKEDAGAIAAFLQSLKPVSHQVPGPFKPGEKVSTFMFRI FT LPPGETAAAAPK" FT gene complement(65491..65658) FT /locus_tag="SMa0121" FT CDS complement(65491..65658) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0121" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q930Y2" FT /protein_id="AAK64720.1" FT /translation="MIRFERKPDPQPSLKEAENKRTKQISEAAKEENKKSGTTGAPRRA FT PQAADDDRLI" FT gene complement(65729..66112) FT /locus_tag="SMa0123" FT CDS complement(65729..66112) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0123" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q930Y1" FT /protein_id="AAK64721.1" FT /translation="MQNSKTSITQQFGSYKPSKAILVWACVATAAATMIVGFNWGGWVT FT GGTSRTAAAAAADIARGELASAICVERFNAAPDAAAKLIEFKAITDGYKKRQFVEAGGW FT ATMPGETAPDSRSVQGCATALAI" FT gene complement(66192..67826) FT /gene="groEL3" FT /locus_tag="SMa0124" FT CDS complement(66192..67826) FT /codon_start=1 FT /transl_table=11 FT /gene="groEL3" FT /locus_tag="SMa0124" FT /product="60 kDa chaperonin" FT /function="Chaperonin GroEL (HSP60 family)" FT /note="60 kDa chaperonin (Protein Cpn60) (groEL protein), FT TCP-1/cpn60 chaperonin family, high confidence in function FT and specificity" FT /db_xref="GOA:Q930Y0" FT /db_xref="HSSP:1IOK" FT /db_xref="InterPro:IPR002423" FT /db_xref="UniProtKB/Swiss-Prot:Q930Y0" FT /protein_id="AAK64722.1" FT /translation="MSAKQIVFSTDARDRLLRGVELLNNAVKVTLGPKGRNVVIDKSYG FT APRITKDGVSVAKEIELEDKFENMGAQMVRAVASKTNDLAGDGTTTATVLAASIFREGA FT KLVSVGMNPMDLKRGIDLGVAAVLAEIKARATKVISSSEIAQVGTIAANGDAGVGEMIA FT RAMEKVGNEGVITVEEARTADTELDVVEGMQFDRGYLSPYFVTNAEKMRVELEDPYILI FT HEKKLGSLQAMLPILEAAVQSGKPLLIISEDVEGEVLATLVVNRLRGGLKIAAVKTPGF FT GDRRKAMLEDIAVLTAGQMISEDLGIKLENVTLDMLGRARRVLIEKDTTTIIDGSGDKA FT SIQARVSQIKAQIEETASDYDKEKLQERLAKLAGGVAVIRVGGATELEVKEKKDRIDDA FT LNATRAAVEEGIVPGGGVALLRAKSALVGLTDDNADVTAGISIVRRALEAPIRQIADNA FT GVEGSIVVGKLVDGRDHNQGFDAQTETYVDMIKAGIVDPAKVVRTALRDAGSIASLLIT FT AEAMIADIPERGSPQSTGNGAVDSMGY" FT gene complement(67874..68191) FT /gene="groES3" FT /locus_tag="SMa0125" FT CDS complement(67874..68191) FT /codon_start=1 FT /transl_table=11 FT /gene="groES3" FT /locus_tag="SMa0125" FT /product="10 kDa chaperonin" FT /function="Co-chaperonin GroES (HSP10)" FT /note="Chaperonin 10 Kd subunit GroES (HSP10), high FT confidence in function and specificity" FT /db_xref="GOA:Q930X9" FT /db_xref="HSSP:1HX5" FT /db_xref="InterPro:IPR018369" FT /db_xref="UniProtKB/Swiss-Prot:Q930X9" FT /protein_id="AAK64723.1" FT /translation="MTFRPLLDRVVIRRAEGNTQSKGGIIIPDTAKEKPQEGEVIAVGP FT GSRDESGKLIPLDVKIGDTILFGKWSGTEVKIDGEDLLIMKESDIMGIVANTVPTAANA FT A" FT gene 68805..69014 FT /gene="cspA8" FT /locus_tag="SMa0126" FT CDS 68805..69014 FT /codon_start=1 FT /transl_table=11 FT /gene="cspA8" FT /locus_tag="SMa0126" FT /product="CspA8 Cold shock family protein" FT /function="Cold shock proteins" FT /note="Contains a pfam00313, CSD, 'Cold-shock' DNA-binding FT domain; Also, is similar to smart00357, CSP, Cold shock FT protein domain; RNA-binding domain that functions as a RNA- FT chaperone in bacteria and is involved in regulating FT translation in eukaryotes; Contains sub-family of RNA- FT binding domains in the Rho transcription termination FT factor, family membership" FT /db_xref="GOA:Q930X8" FT /db_xref="HSSP:1MJC" FT /db_xref="InterPro:IPR019844" FT /db_xref="UniProtKB/TrEMBL:Q930X8" FT /protein_id="AAK64724.1" FT /translation="MTTGTVKWFNSTKGFGFIAPDDGSADVFVHISAVERAGMNSIVEG FT QKLGFELERDNKSGKMSAGQLRAA" FT gene 69135..69515 FT /locus_tag="SMa0128" FT CDS 69135..69515 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0128" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q930X7" FT /protein_id="AAK64725.1" FT /translation="MRHPSDNGFAERRNAAADAKRQLLTKFASAPKPTDPEMREKLAAR FT EAASRARDARRAEREALKTAENERILAEAAASAAAAEAEQRAEAEARQAEISNRVSRVV FT ADEAARKAERDRRYAARKARRA" FT gene 69601..70668 FT /locus_tag="SMa0130" FT CDS 69601..70668 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0130" FT /product="Fatty acid desaturase" FT /EC_number="1.14.99.-" FT /note="Family membership" FT /db_xref="GOA:Q930X6" FT /db_xref="InterPro:IPR005804" FT /db_xref="UniProtKB/TrEMBL:Q930X6" FT /protein_id="AAK64726.1" FT /translation="MSAHVYPPASLVEDNAGAWLKTLAKYRQPRLGRSAFELFVTLVPF FT AIFWAAACFSLANGFWPGLIAILPASAFLLRLFMIQHDCGHGSFFSRRGLDDWTGRLLG FT VLTLTPYDYWRRAHAAHHATAGNLDERGVGDITTLTITEYCALSPIKRLGYRLYRHPLV FT MFGIGPAWLFLFKQRLPFGMMNSGALPWISTMATNFAIVTLAALMVWAVGLGTFLLIHL FT PVVLLAGAAGVWLFYVQHQFEETHWSAGEDWRFPQAALHGASHYDLPPVLRWLTGNIGI FT HHVHHLSSRIPYYRLPEVLRDHPQLAGIGRITLWDSLKCVRLVLWDDRRRRLVSFHDAA FT GSLRRSLTEDGRKTK" FT gene 70668..70955 FT /locus_tag="SMa0132" FT CDS 70668..70955 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0132" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q930X5" FT /protein_id="AAK64727.1" FT /translation="MIELTPTQIRGLKLAKDGDVHPQAGKRWTHLNAQVTYAKQDRFKE FT RPQKIKFLTTATLNELRDHRLVKALNTDVPPEESAHGITMAGKMLLLKIK" FT gene complement(71066..71671) FT /locus_tag="SMa0134" FT CDS complement(71066..71671) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0134" FT /product="conserved hypothetical protein" FT /note="similar to Smb20087 of S; meliloti pSymb & to FT Atu5287, Atu5492 of Agrobacterium tumefaciens & Mll2445 of FT Mesorhizobium loti" FT /db_xref="UniProtKB/TrEMBL:Q930X4" FT /protein_id="AAK64728.1" FT /translation="MRTVTGLFDDYGDAREAVSDLEAAGVPSDDISIVANNIGDRYSTD FT GSNAAEGAGTGAGLGAAGGGVVGLLTGLGLMAIPGVGPVVAAGWLASTAAGAAAGAIAG FT GAAGGLIGALTESGVDEEDAHVYAEGVRRGGTLVTARVEDSVAPRAEAILKQRKIVDPA FT ARRSIYAQEGWSRFDENADPYTLDQVDRERERYRSMMP" FT gene complement(71712..72026) FT /locus_tag="SMa5002" FT CDS complement(71712..72026) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa5002" FT /product="conserved hypothetical protein" FT /note="Similar to S; meliloti SMb20086 and to Agrobacterium FT tumefaciens Atu5288 & Atu5493" FT /db_xref="UniProtKB/TrEMBL:B3KLW3" FT /protein_id="ACF07961.1" FT /translation="MKNIIIVAAALMSAATTASLAQTTPSSEGETPAVATPDSQNPTAP FT VEGANSFTEAQAKERIEEAGYTDVSGLKLDDKGVWQATAMKEGKSVSVALDYQGNVTAQ FT " FT gene 72274..74286 FT /locus_tag="SMa0136" FT CDS 72274..74286 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0136" FT /product="conserved hypothetical protein" FT /note="localized similarity to membrane proteins" FT /db_xref="InterPro:IPR002549" FT /db_xref="UniProtKB/TrEMBL:Q930X3" FT /protein_id="AAK64729.2" FT /translation="MLKFSRGIDQDRAATAGGLQQIAFARGSAAAAQPSRLPTLVATAA FT AVAVLYFARDVFLPLAIAILLTFALAPLVSRLRRVGCPRSVAVIGTVTTAFLFLSAFGV FT VIAMQVSEVAQNLPTYQYNIVEKVRTLKETGSESQILERIGRVIERISTEISRPEPEVR FT ASPEPTPETKPLLVEIFSPQRPIETLKNIINPLLGPLATTGLVIVVVIFMLLEREELRD FT RFIRLVGYGDLHRTTEALQDAGARVGRYLLMQLVVNITYGIPLAIGLSLLGIPNAVLWG FT MLAIVLRFVPYIGPVIAAALPLFLAFAAAPGWSLLVWTAALFIVLELLSNNVVEPWLYG FT SRTGLSPLAIIVAAIFWAWLWGPVGLVLSTPLTVCLVVLGRHVPQFEFLEILLGNEPVL FT DPKERLYQRLLAGDPDEATDNAEDMLQEKYLVEFYDTVAIPALLLAERDRARGALTNTQ FT AAQIAQSANTLIANLEEIAGEEEGEEETSTEAQESDDDNDDAEEYDLPPGDGKSVLCVG FT GRSDLDDVTASMLAQTLWIQGADAAHATHEVLKAGNIKALQLEGRNAVVLSVLDQDFMR FT HAKFTVRRLKRIAPAARVGIVLWKEDGRPGTTERDQLIESLQADFVVFGMGDAVREALS FT DELPRSLKLAHPKIAPGYAMRRSKRTDTESTVKAD" FT gene 74378..76579 FT /locus_tag="SMa0137" FT CDS 74378..76579 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0137" FT /product="Diguanylate cyclase/phosphodiesterase" FT /function="Predicted signal transduction protein containing FT a membrane domain, an EAL and a GGDEF domain" FT /note="Diguanylate cyclase (GGDEF domain)/phosphodiesterase FT (EAL domain), conserved hypothetical protein" FT /db_xref="InterPro:IPR001633" FT /db_xref="UniProtKB/TrEMBL:Q930X2" FT /protein_id="AAK64730.2" FT /translation="MRFVAGKVAVFRWMLPLAIAMALMGGIYLAVRWSAQQSDAVAVKR FT QQHLVELVISKMQGSIAHDQESVTVWDDAVRKVSQEWDPRWVDSNLGSWMNSYFRHDGA FT FVISPDRKPLYAFLAGQTNEQEAFSEIGPEAMPLIAKLQERLAAGDEGGTSEQVLSIGE FT SDLVRIGGRPAIISVKPIVSDTGDIVQEPGREYLHLAARFLDGDFLTHLGDDYGFEDLR FT FSVLPELGRQRSYAPIVSSSRETIGYFSWLPFRPGADVMKATAPVLLVAGALLFALTSA FT LSVVLRRRSRRLQESQAELDHLARHDPLTGLANRASFNRLLARVVATSTIDQANALLYL FT DLDRFKQVNDTLGHPVGDRLMVEVAKRLKETAAGAAISRIGGDEFTIIVARTRQDEVEK FT LCDALIAAIRRPFEIDGQPILIGLSIGVAVATGNDADPIEITRKADIALYHAKSAGRNR FT YAVFGPHMDELIRTKRDLEQDLRAALDAGNQLEVFYQPVYSAQSHEISSLEALIRWRHP FT SKGPIAPDAFVPLAETAGLIDRLGAFVLKEACSTAREFPGLDIAVNVSAVELAQRHYAA FT QVLSLLRQFGIEPSRLELEITETALLDEAGVCEKNITALREFGVKFALDDFGTGFSSFG FT RLQRLEVDRIKIDRSFVHAFDRPGGGVAVVQSIVGIAHAKGLRITAEGVETEEQSEILR FT KLGCDELQGFHLSRPMSKNSLRQLLGADKAQGTSSSSRS" FT gene complement(76655..76975) FT /locus_tag="SMa0139" FT CDS complement(76655..76975) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0139" FT /product="conserved hypothetical protein" FT /note="pfam06983, 3-dmu-9_3-mt, 3-demethylubiquinone-9 3- FT methyltransferase; This family represents a conserved FT region approximately 100 residues long within a number of FT bacterial and archaeal 3-demethylubiquinone-9 3- FT methyltransferases ; Note that some family members contain FT more than one copy of this region, and that many members FT are hypothetical proteins" FT /db_xref="InterPro:IPR009725" FT /db_xref="UniProtKB/TrEMBL:Q930X1" FT /protein_id="AAK64731.1" FT /translation="MLTVDFTVAGILNGGPAFKHNEAFSFQIATDDQEETDRYWNAIVG FT NGGQESACGWCKDKWGISWQITPRVLAEAMAAGGDEAKRAFEAMMTMKKIDVAAIEAAR FT RG" FT gene complement(77422..78822) FT /locus_tag="SMa0142" FT CDS complement(77422..78822) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0142" FT /product="extracellular serine protease" FT /function="Subtilisin-like serine proteases" FT /EC_number="3.4.21.-" FT /note="Peptidase S8 and S53, subtilisin, kexin, sedolisin, FT Subtilase family, family membership" FT /db_xref="GOA:Q930X0" FT /db_xref="HSSP:1MPT" FT /db_xref="InterPro:IPR000209" FT /db_xref="UniProtKB/TrEMBL:Q930X0" FT /protein_id="AAK64732.1" FT /translation="MLTKLKLALIAPIAAIALVSGDILAPGNMIVREVIGTGLALADDD FT DDDGGSGGNRGSGGSGRSGSYGAGAGWSGGKSLFPFREFLPRRSIPRRSRAAAPAAPIR FT APDEIVGLGFSPTELGELTATGFEVLERNTMTSFNAEVIKLRIPRRLTLEAARQRARAA FT APQAVIDFNHYFRPEQHPDAPCVTSDCLARDVIGWPSAQTGLSNCAAGVRIGLVDTAIN FT PDHLAFEARNIEIVRLVEEELPESGRQHGTAVAALLVGSASSRTPGLIPGGKLIAVDAF FT HRGERQDDRSAAFDLARALDLLTRRQVQVINLSLAGPPNLLLEQAVMKAGERGIIMVAA FT AGNDGPKAEPVYPAAYEEVIAVTATDRRKRPYRRAGRGEHIDFAAPGVAVWTAASVSGA FT RPKTGTSFAAPFVTAAVAMMKASEPDLAPEMIHSRLSGHAEDLGDPGKDAVFGWGLLNA FT RAICKTKS" FT gene 78965..79507 FT /gene="rpoE6" FT /locus_tag="SMa0143" FT CDS 78965..79507 FT /codon_start=1 FT /transl_table=11 FT /gene="rpoE6" FT /locus_tag="SMa0143" FT /product="RNA polymerase ECF sigma factor" FT /function="DNA-directed RNA polymerase specialized sigma FT subunit" FT /note="Belongs to the sigma-70 factor family;, ECF FT subfamily, family membership" FT /db_xref="GOA:Q930W9" FT /db_xref="InterPro:IPR014284" FT /db_xref="UniProtKB/TrEMBL:Q930W9" FT /protein_id="AAK64733.2" FT /translation="MSNAVKDVGERLMAFLPNLRRFAISLCGSRDVADDLVQSACERAL FT ASAERFEPGTRFDAWIFRILRNLWIDQVRRQKTAGVQDDITERHDIAGSSGERETEARL FT TLKTVAEAITELPDEQREVVLLVCVEELSYREAADVMGIPIGTVMSRLMRARRSLAEAA FT GITQATGRSQSMKGANE" FT gene 79504..80289 FT /locus_tag="SMa0144" FT CDS 79504..80289 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0144" FT /product="hypothetical protein" FT /function="unknown" FT /db_xref="UniProtKB/TrEMBL:Q930W8" FT /protein_id="AAK64734.1" FT /translation="MTRADFSDEILMRFADGELDTGTAAEVERAMETDDALVARVALFI FT ETRHAAKAAMEPLLDEPVPSELKRAVERMVMEKTSPPSVSGAGILPFPRRAANESHRSR FT WLAPVAASLAAVVAGFGGYWLRGSVEAPIEGGLGVAAIGSPALDEALATVAAGEERRLP FT GSDQRFRAIATFRDNAQALCREFELDSDDRSTVVSVACRAGSEWRVTFAVIAPGATGGY FT APASSTETLDAYLTAIDAGAPLEAAEEARALSELQGAQR" FT gene complement(80295..80819) FT /locus_tag="SMa0146" FT CDS complement(80295..80819) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0146" FT /product="hypothetical protein" FT /function="unknown" FT /db_xref="UniProtKB/TrEMBL:Q930W7" FT /protein_id="AAK64735.1" FT /translation="MSGPRSLVAPSTFPQSQRPVCHSLPGRYDRSDRFELELDERFEEE FT FDELFEDELELEFEELLDEELELELLEELELELLEELELELDELLPATMISPSVRPVWA FT VCVEVRSTPGNKGAYSLASAAEPTNAARPAAIALFVQFFAISSTPCENRTGSSVRRSNG FT RCAPLFHDRNF" FT gene complement(80960..81673) FT /locus_tag="SMa0148" FT CDS complement(80960..81673) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0148" FT /product="conserved hypothetical protein" FT /function="unknown" FT /db_xref="UniProtKB/TrEMBL:Q930W6" FT /protein_id="AAK64736.1" FT /translation="MLSFLKKDPQVIQFVCHPEDDGVIAPPLPAKSVLPDWFRRLPAVD FT KGHLSATNNGLTVKRCMPFLDAMTTGWILPIAATVRLDVKDDGRSVDAGWEFDRVMVSN FT HGAHQVAGNPKEPSPPCKFHNYWSIRTPPGWSCLFLPPLNRPGQPFECVAGIVDTDSYS FT AHIHFPFFATAPDGLHVVEKGTPLVQVIPFRRADAAVTAEIRAETRAEATEREAIHRNT FT LAGEGWYRKSARAAR" FT gene 81858..82340 FT /locus_tag="SMa0149" FT CDS 81858..82340 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0149" FT /product="conserved hypothetical protein" FT /function="unknown" FT /note="Similarity to prokaryotic transcription elongation FT factor, GreA/GreB, C-terminal domain" FT /db_xref="GOA:Q930W5" FT /db_xref="HSSP:1GRJ" FT /db_xref="InterPro:IPR001437" FT /db_xref="UniProtKB/TrEMBL:Q930W5" FT /protein_id="AAK64737.1" FT /translation="MSVAFIKEESAETASETLLPDRPISPHPNLVTETGLKALELHLQQ FT AREAFDATSTIEDVNERRRQSAGPLRELRYFAERVRTAQLVPDPASFDVVAFGSTVTFS FT RDDGRVQKYRIVGEDEADPKAGSISYVSPVARVLMGKSVGDVASVGDQELEILAIS" FT gene complement(82374..83900) FT /locus_tag="SMa0150" FT CDS complement(82374..83900) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0150" FT /product="fatty acid CoA ligase" FT /function="Acyl-CoA synthetases (AMP-forming)/AMP-acid FT ligases II" FT /EC_number="6.2.1.-" FT /note="AMP-dependent synthetase and ligase, family FT membership" FT /db_xref="GOA:Q930W4" FT /db_xref="HSSP:1LCI" FT /db_xref="InterPro:IPR000873" FT /db_xref="UniProtKB/TrEMBL:Q930W4" FT /protein_id="AAK64738.1" FT /translation="MSNHLFDAIRRAARPDSAFILTADGRVWTYGDMLEHSGRIASVLD FT ALGVRPGDRVAVQVEKSPEALMLYLACLRTGAVYLPLNTAYTLAELDYFFGDAEPRLIV FT CAPGAKEGIAKHAADCGAEVETLDEKGGGSLIDLARGKAPDFPDADRGPDDLAAILYTS FT GTTGRSKGAMLTHDNLLSNATTLREYWRFTADDRLIHALPIFHTHGLFVASNVILLAGA FT SMFFLPKFDANEVLRLMPQSTSMMGVPTFYVRLVQNPGLTHEATAGMRLFVSGSAPLLA FT ETHRTFAQMTGHAILERYGMTETNMNTSNPYDGERIAGTVGFPLPGVSLRVADPESGRP FT LPKGETGMIEVKGPNVFKGYWRMPEKTQGEFRADGFFITGDLGRIDERGYVHIVGRGKD FT LVISGGYNIYPKEVETEIDQMPGVVETAVIGLPHPDFGEGVTAVVVRKPGAAIDERAIL FT DGLEGRLARYKQPKRVIFVDDLPRNTMGKVQKNVLRETYARLYAGAEARV" FT gene complement(83897..86626) FT /locus_tag="SMa0151" FT CDS complement(83897..86626) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0151" FT /product="hypothetical protein" FT /function="TRAP-type uncharacterized transport system, FT fused permease components" FT /note="Transports malonic acid; Expression of SMa0151 and FT SMa0151 is induced by malonic acid; TRAP-type transporter, FT high confidence in function and specificity" FT /db_xref="GOA:Q930W3" FT /db_xref="InterPro:IPR010656" FT /db_xref="UniProtKB/TrEMBL:Q930W3" FT /protein_id="AAK64739.2" FT /translation="MIVACLFVLLATGMPIAFALGLAAFAALYMQSGAGIFYVLGDTMF FT SGIANLAYVSIPMFVLMGAAVASSPAGSDLYTSLDRWLNRIPGGLILSNIGACAIFSGM FT TGSSPATCAAIGKMGIPEMMRRGYPASVASGSIAAGGTLGILIPPSVTLIVYGIATETS FT IGRLFMAGILPGILLTIMFMTWAVIDCKRKGYEFEARLVRYSMKERLAVLPRILPFLLI FT IAGTLYVLYGGIATPSEAAGAGAFLTLAVVIVAYRLFRFRPVAGIFGSAMKESVMIMMI FT MAAAELFAFALSSLFITQTVAAAIADMEVNRWVLMAVINVFLLICGMFLPPVAVIVMTS FT PMLFPIVTQAGFDPYWFAIVLTINMEVGLITPPIGLNLFVINAIAPQIPTKDILWGSLP FT YVLVMFLAIILLCVFPDVATWLPNQMLGDRPMNTTSFFSDMLQSIAERGRRFLSLGPAR FT NGDVNPVGTMEALCDTLLSSRGEASGMALAKNILDRWQGFDQDKRRDFMLALLSRFGPD FT IERLERAIDAYRADPTPKALLEMSMAAEPRRQELIRRLNLAPNGIATLVRMRADLLELK FT AQNPDLEAVDTDFAHLFGSWFNRGFLVLRPISWSTPADILEKIIRYEAVHHIGGWDELR FT RRLAPEDRRCFAFFHPQLVDDPLIFVEVALTREMPPNIADLLKEDRAPIRATDATTAVF FT YSISNCQEGLRGISFGNFLIKQVVEDLRRDLPRLDTFVTLSPVPGFADWLSRERQAETS FT NALSAADRSRLAALDEPDWADQPEIAAAIQPSLTAAAAWYFLRARNRNGKTVDPVARFH FT LGNGARLERINFLGDRSERAMRQAHGLMVNYLYKLDDIETNHEAFATRGEVVAAPAIRR FT LIPADRSSRSLVPGPNVFPPGVRSADAPGRKGDKEFTS" FT gene complement(86647..87216) FT /locus_tag="SMa0155" FT CDS complement(86647..87216) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0155" FT /product="hypothetical protein" FT /note="Transports malonic acid; Similar to tripartite ATP- FT independent periplasmic transporter, DctQ component, high FT confidence in function and specificity" FT /db_xref="InterPro:IPR007387" FT /db_xref="UniProtKB/TrEMBL:Q930W2" FT /protein_id="AAK64740.1" FT /translation="MLKAYSRAVGNASRGLAAVATALLIAAMLVVCQMIMQRYVFRQAT FT IWQTDFVVFSATAAMFLGAPYVLLKGGHVGIDVVEMVVGERTRYVLRIIAGLLGLLFCA FT VMLIATWIQFHDAWAGNWKHSSVWAPPLWVPLAALPVSFAMLCLQYVAQILTLLTAPAV FT PAAMGHGAAEPGSAPGADRHPQEIIQ" FT gene complement(87283..88287) FT /locus_tag="SMa0157" FT CDS complement(87283..88287) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0157" FT /product="ABC transporter, periplasmic solute-binding FT protein" FT /function="TRAP-type C4-dicarboxylate transport system, FT periplasmic component" FT /note="Transports malonic acid; Expression of SMa0151 and FT SMa0151 is induced by malonic acid; Bacterial extracellular FT solute-binding protein, family, high confidence in function FT and specificity" FT /db_xref="GOA:Q930W1" FT /db_xref="InterPro:IPR018389" FT /db_xref="UniProtKB/TrEMBL:Q930W1" FT /protein_id="AAK64741.1" FT /translation="MSSFRRKLTTSAVAAICSLVASTAGAQTVLKASHQFPGGKGDIRD FT EMVQLIAREVAAANVGLEIQVFPGSSLYKPNDQWNAVTRGLLDMTSFPLDYASGRHPEF FT SATLMPGLVGNFDRAMRLNDSEFMGDIKKVIENAGALVIADAWLSGAFASKKNCITSPD FT TIKGQVIRAAGPAFEEMLVEAGASISSMPSSEIYTGMQTGVLDAANTSSASFVSYRLFE FT QAKCLTAPGENALWFMYEPVLVSKRVFDGLTEEQQKAILAAGEKAEVYFNEEVRKGDQV FT MIDTYKKAGVEVVEMSKEDYDAWLELAKASSYKNFAANVPGGDKLIEKALAVK" FT gene 88416..89090 FT /locus_tag="SMa0160" FT CDS 88416..89090 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0160" FT /product="Transcriptional regulator, GntR family" FT /function="Transcriptional regulators" FT /note="Contains 1 HTH gntR-type DNA-binding domain, family FT membership" FT /db_xref="GOA:Q930W0" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q930W0" FT /protein_id="AAK64742.1" FT /translation="MSENIFYKLRDDIENGIVTGEFEPGERLDETQLAMRFGVSRTPIR FT EALMQLSAIGLVEIRPRRGAVVVDPAPQRVYEMFEVMAELEGMAGALAARRHTEEDSAA FT LLAAHEKCREAVLSEETDRYYYENEIFHRAIYTASHSGFLEEQCTTLHRRLRPYRRLQL FT RVRNRMKVSFREHGEIVEAILSGNTDGAREGLRSHVAVQGDRFGDLVANLSNRERRSGR FT LG" FT gene complement(89275..89520) FT /locus_tag="SMa0162" FT CDS complement(89275..89520) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0162" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q930V9" FT /protein_id="AAK64743.2" FT /translation="MTISSNRCTALIVTVLPFATLIDREKFDEISTESPFADAGGLTPM FT PVHRATTKQKNAKREPLDLVMVPVFLHDTRHNVALS" FT gene 89324..90724 FT /gene="pilQ2" FT /locus_tag="SMa0163" FT CDS 89324..90724 FT /codon_start=1 FT /transl_table=11 FT /gene="pilQ2" FT /locus_tag="SMa0163" FT /product="PilQ2 pilus assembly protein" FT /note="Similar to Flp pilus assembly protein and secretin FT CpaC; Contains a BON, putative phospholipid-binding domain; FT This domain is found in a family of osmotic shock FT protection proteins; It is also found in some Secretins and FT a group of potential haemolysins; Its likely function is FT attachment to phospholipid membranes; Also contains a FT secretin_C domain, found in bacterial type II and III FT secretion system protein, conserved hypothetical protein" FT /db_xref="GOA:Q930V8" FT /db_xref="InterPro:IPR007055" FT /db_xref="UniProtKB/TrEMBL:Q930V8" FT /protein_id="AAK64744.2" FT /translation="MTRSRGSLFAFFCFVVALCTGIGVSPPASANGDSVEISSNFSRSI FT KVAKGKTVTIRAVQRFDEIVIGDPEIATVTPLTDRSFYILGNELGSTSVTIFDAEKNPV FT GIIDIEVTLDTKLLSSTIRQSVPGSSVKVTSANGRIVLSGSATDAVAATQAEQIASRFA FT GDEEVINSIKITSSQQVQLNVRFVEINRDVGKELGTQISAAYAWSNGSVEFNSSPRATS FT NTPAGSLIGSLIGEGYSVDVAIDALEDRGMARRLAEPNLIARSGETSSFLAGGEFPIPI FT SEQDGTITVSYKKFGVGLDFTPTVLSDGLIALDIEPEVSAIDNTASYRVGNIAIPGFSV FT RRARTSVDLKSGQSFMIAGLLQSENNLITQRVPGLGQLPILGALFSSKAYQRRETDLVI FT IVTPHLVKPIDPLKKVASPSDRTKRPTEAEFFLGNIDEVEVNGRGRSASRQARVVRAPS FT SGHFLELQ" FT gene 90721..91017 FT /locus_tag="SMa0164" FT CDS 90721..91017 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0164" FT /product="hypothetical protein" FT /note="Weak similarity to hypothetical protein from FT Mesorhizobium sp; BNC1 and hypothetical protein RHE_PE00307 FT from Rhizobium etli CFN 42" FT /db_xref="UniProtKB/TrEMBL:Q930V7" FT /protein_id="AAK64745.1" FT /translation="MIRRSSRPRGFPGLLFASSILLSGCQNHELVRSETIALSAGDAIA FT ANSVMQMVDPWPPRVKQTSLATPADLEQYKPQQPNAEQNGGNGETYPNDTTTQ" FT gene 91039..91569 FT /locus_tag="SMa0166" FT CDS 91039..91569 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0166" FT /product="conserved hypothetical protein" FT /note="Partial similarity to TadD, Flp pilus assembly FT protein which contains TPR repeats; Does not contain full FT TPR repeat consensus sequence, TPR, Tetratricopeptide FT repeat domain; typically contains 34 amino acids [WLF]- FT X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-X(2)- FT [ASL]-X(4)-[PKE] is the consensus sequence; found in a FT variety of organisms including bacteria, cyanobacteria, FT yeast, fungi, plants, and humans in various subcellular FT locations; involved in a variety of functions including FT protein-protein interactions, but common features in the FT interaction partners have not been defined" FT /db_xref="GOA:Q930V6" FT /db_xref="InterPro:IPR013026" FT /db_xref="UniProtKB/TrEMBL:Q930V6" FT /protein_id="AAK64746.1" FT /translation="MEMTTGASGRSVLGRSGGGRRPTELVMAIVATVILSSCQTSEVLS FT GAEFDPTSALASSGDVSKSDLDQGKLQFMNGNYGLAEKHFRKAVELRQDNAEALMGLAA FT CYDRLGRFDLADRAYNQLLKVAGRQPRIVNNMGYSQYLRGEKAKARKLLLEARAASPGD FT ETIEANLALLDRS" FT gene 91653..92465 FT /locus_tag="SMa0168" FT CDS 91653..92465 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0168" FT /product="conserved hypothetical protein" FT /note="Has partial similarity to COG2226, UbiE, Methylase FT involved in ubiquinone/menaquinone biosynthesis" FT /db_xref="GOA:Q930V5" FT /db_xref="InterPro:IPR013216" FT /db_xref="UniProtKB/TrEMBL:Q930V5" FT /protein_id="AAK64747.1" FT /translation="MAMASDVLARSFGKEAFGLDPQNYHTARPAYPELVWDALRNRAGL FT RRGISILEIGAGTGLATERLLEDRPHRLLAVEPDRRLARFLRGRLDKEELEVVETPFEK FT LKVPEKSFDLVVSATAFHWIDAAPALRRIHRLLRAGGTVALFWNVFGDGVRPDPFHRAT FT AHLFSGHRTSPSGGGTTKTPYGLNVGARLGELAEAGFTADEPELIDWTLALDPPAVRRL FT YATYSNVTALPADERERLLSGLEKIAETEFAGVVTRNMTTSVYTGRRE" FT gene 92526..93311 FT /locus_tag="SMa0169" FT CDS 92526..93311 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0169" FT /product="putative methyltransferase" FT /note="Function unclear" FT /db_xref="GOA:Q930V4" FT /db_xref="InterPro:IPR013216" FT /db_xref="UniProtKB/TrEMBL:Q930V4" FT /protein_id="AAK64748.1" FT /translation="MALDRADFYDAELARHNRQLRVAADFGADDRVLDIGCGAGQTTRE FT AARAAPQGEAIGVDISAEMLEEARRRSAAEGLRNAMFEQGDAQFHGFPTGSFDLCISRF FT GVMFFADPAAAFANIGRAMRPGARLVWMVWQSRERNEWSRAIRQALAPAIAVSAGAANP FT FSLGDPPVATDLLSAAGFTSIDFADVQEPVFYGSDVDAAFDALTSLYLVQDALASTNEP FT PDKPLQRLRDLLEGHMTPEGVFFDSRAWIITARRAGGGG" FT gene complement(93492..94256) FT /locus_tag="SMa0171" FT CDS complement(93492..94256) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0171" FT /product="conserved hypothetical protein" FT /note="Most similar to hypothetical protein RHE_CH01073 FT from Rhizobium etli CFN 42" FT /db_xref="UniProtKB/TrEMBL:Q930V3" FT /protein_id="AAK64749.1" FT /translation="MNATKLLLILPLLAAFAYISLVSLTYLSQRALLYPGASATPAPER FT ASWGQNASIQTPDGETLHGLYSRGEPGQPSVLFFLGNADRVSNYGFFAQALAARGIGLL FT ALSYRGYPGSSGTPNEHGLLIDGIAAFDWLAARSGNEIVVLGQSLGSGVAVDTAGKRPA FT VAVILVSAYLSVLSLAQTYYPFFPVALLTKDPFRSDLKIAGVRQPEAVYPRPARHHHPI FT VFGRSSVSDRSRAQADAHLRCRPQRSVGCPHG" FT gene 94473..95393 FT /locus_tag="SMa0172" FT CDS 94473..95393 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0172" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR005660" FT /db_xref="UniProtKB/TrEMBL:Q930V2" FT /protein_id="AAK64750.1" FT /translation="MSNSKDEVERIDWLEAELADTIDEDYELELSEPTLSEKIREIYRK FT AHPPALPRMDYFRALLALQAELIKLQDWVVYHKQKVVVIFEGRDAAGKGGVIKRITQRL FT NPRIVRTVALPAPSDREKTQWYFQRYVPHLPAGGEIVLFDRSWYNRCGVERVMGFATEE FT EVEQFFDDVPEFERMLVRSGVRLVKYWFSITDEEQQLRFLTRIHDPLKQWKLSPMDLQS FT RVRWEAYTKAKEETFARTNIREAPWHIVEANDKKRARLNCIDHLLKQIPYEDVPHEDIT FT LPERIFNPNYERKVLPPELYVPAKY" FT gene complement(95789..96871) FT /locus_tag="SMa0175" FT CDS complement(95789..96871) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0175" FT /product="conserved hypothetical protein" FT /note="Contains a domain pfam00924, MS_channel, FT Mechanosensitive ion channel; Two members of this protein FT family in M; jannaschii have been functionally FT characterised; Both proteins form mechanosensitive (MS) ion FT channels upon reconstitution into liposomes and functional FT examination by the patch-clamp technique" FT /db_xref="GOA:Q930V1" FT /db_xref="InterPro:IPR006685" FT /db_xref="UniProtKB/TrEMBL:Q930V1" FT /protein_id="AAK64751.1" FT /translation="MERGDKEQENLSRLEQAAQQTADPKTMQQKATKGPEEKLRFSLRK FT KDVWWTVGLAAAALLLFGIQVLINWRLDWLDVPLRLRVMNYVKGGLLIFIMLTVANVIE FT VFLIGRIPNRVSRFNLKRIFRLVVVVAIVFVAISVLFVNWYAAFVSLGLISLILGFALQ FT MPISSFIAWIYILARAPYRVGDRIRIGDAHGDVIDVSYLDTTLWEFGGEYLWTDHPSGR FT IIKFPNSTVFDTPVFNYSWPLFPYVWNEIKFQLAYESDLEFVARTMREVVEEQVGDIMS FT QKVKIYKHILSNTPVDELEVKEHPVVHFRVSENTWLEAIVRYLVPPKEAGRTKTRLIKE FT MLARMNAEPDRVLFPKSNLR" FT gene complement(98400..99317) FT /locus_tag="SMa0179" FT CDS complement(98400..99317) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0179" FT /product="Transcriptional regulator, LysR family" FT /note="Contains a LysR substrate binding domain, but only a FT partial helix-turn-helix domain, family membership" FT /db_xref="GOA:Q930V0" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q930V0" FT /protein_id="AAK64752.1" FT /translation="MHRPRLPPLSALRAFEAAARLASFKAAAEELLVTPTAISHQIKQL FT EAHMSLRVLDRTPRAVTLTPRGKALYEATAAGFGEIERVVTRLLAETAPTTVTLTSTIA FT FLSHWLVPRMDALRQTIPNIDLRLHASNKVEELRSGGIETAIRYGRGPFAGTASMQLCS FT DAMTPVCSPSLGLSQLGDLRRVTLIHIDGRSRPAPKPDWNRWCEQAGITDLDTSAGPRF FT PDSMLAVQAAIAGQGVVIASRVLVADALATGLLEAPFTQSLAGDAYHFACALGLEQRTD FT IAALRMWFQNCFSAAEPDPAHRLP" FT gene 99435..100307 FT /locus_tag="SMa0180" FT CDS 99435..100307 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0180" FT /product="epimerase" FT /note="Belongs to the family of PhzC-PhzF-like epimerases, FT Phenazine biosynthesis-like protein; PhzC/PhzF is involved FT in dimerisation of two 2,3-dihydro-3-oxo-anthranilic acid FT molecules to create PCA by P; fluorescens, conserved FT hypothetical protein" FT /db_xref="GOA:Q930U9" FT /db_xref="InterPro:IPR003719" FT /db_xref="UniProtKB/TrEMBL:Q930U9" FT /protein_id="AAK64753.1" FT /translation="MVELIAGLIDVFADVPLTGNPLAVVQDADGLTDDQMRRIAGEFNQ FT AETTFLMRSTRADWKLRSFTASGAEVFGAGHNALGAWLWLAENGDLGSLTAARTFQQEI FT GRDVLPIELESVGGRIHGRMRQVPLRLSDPLDDVAPLADALGLDPRDILPEPPARPADT FT GATHLMVRVLNVDSVDRALPVADKLLAVLEKTPAEGCYIYALDADAPDTAYARFFNPSV FT GLWEDAATGTAAGPLAAYLAATGNLTNNELVIEQGTKMGRRSILRIRLAPLPELSGAGI FT VVVKGVIRL" FT gene complement(100505..100708) FT /gene="cspA7" FT /locus_tag="SMa0181" FT CDS complement(100505..100708) FT /codon_start=1 FT /transl_table=11 FT /gene="cspA7" FT /locus_tag="SMa0181" FT /product="CspA7 cold shock protein" FT /note="Contains a pfam00313, CSD, 'Cold-shock' DNA-binding FT domain; Also, is similar to smart00357, CSP, Cold shock FT protein domain; RNA-binding domain that functions as a RNA- FT chaperone in bacteria and is involved in regulating FT translation in eukaryotes; Contains sub-family of RNA- FT binding domains in the Rho transcription termination FT factor, specificity unclear" FT /db_xref="GOA:Q930U8" FT /db_xref="HSSP:1MJC" FT /db_xref="InterPro:IPR019844" FT /db_xref="UniProtKB/TrEMBL:Q930U8" FT /protein_id="AAK64754.1" FT /translation="MPKGTVKFFNDDKGFGFITPEDGGTDVFVHVSALQHGGSLKEGDK FT VSYDVGQDRKTGKSKAENVSVL" FT gene 100964..102508 FT /locus_tag="SMa0185" FT CDS 100964..102508 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0185" FT /product="conserved hypothetical protein" FT /note="Belongs to a group of conserved hypothetical FT proteins; Many in this group are annotated as MFS efflux FT proteins; However, the similarity of the the closest FT homologs to COG2814, AraJ, Arabinose efflux permease is FT weak and partial" FT /db_xref="GOA:Q930U7" FT /db_xref="InterPro:IPR001411" FT /db_xref="UniProtKB/TrEMBL:Q930U7" FT /protein_id="AAK64755.1" FT /translation="MADNIHTPEQASRREWVGLCVLSIACLIYSMDLSVLFLAVPAIVA FT DLDPSASQLLWINDIYGFMVAGFLVTMGTLGDRIGRRRVLLMGAFAFGVASAFAAFSNT FT PGQLILARALLGIAGATIAPSTLSLIVNLFKNEAERNRAISIWGTAFALGGLVGPLIGG FT ILLQYFHWGSVFLINIPVMLLLLAVAPFLLPEYKNNDAGRLDLLSVVLSLATVLPIIYG FT FKHMAADGFQLAQIVYIGLGLLVGLLFVRRQRRLSDPLVDLALFRVPAFTASLMVNLAG FT VFFVFGVFLFQNLFLQLVLGLSPLEAALWSAPSALVFAVMSFQAYRFTNRFGPVRTVLG FT GLLVNAAGAAAMAIAAYAESLIGILGSSMIIGFGFVPVVLTTTGLIVGTAPPERAGSAS FT AISETSAEFGGALGIAVLGSLATLIYRMAMNRADLSSLNPVQAEAVSATLAGAVETARS FT MPGSTSAVWLETAKSGFSLGFAICCVVATVTLLLLAIVARRVYATAHIDESTLAPH" FT gene 102649..103602 FT /locus_tag="SMa0187" FT CDS 102649..103602 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0187" FT /product="short chain alcohol dehydrogenase-related FT dehydrogenase" FT /note="Best similarity to FabG family, Dehydrogenases with FT different specificities (related to short-chain alcohol FT dehydrogenases), specificity unclear" FT /db_xref="GOA:Q930U6" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q930U6" FT /protein_id="AAK64756.2" FT /translation="MKSETGQKQRDIQKQVEGADKKEKPKTSGAMQAGARRYPEPPFPK FT VHQDKPGSEADLPVAPMYDAPFYKGSDKLKDKVALITGGDSGIGRSVAVLFAREGADVA FT IVHLDESQDADDTKAAVEKEGRKCLVIKGDVKDASFCRKAVEKTVMQLGRLDILINNAA FT FQVHTRDIEDLTDEHFDETLKTNLYGYFYMAKAAIPHLKNGSAIINTGSVTGLTGSKEL FT LDYSMTKGGIHAFTRALSGHLVPKGIRVNAVAPGPVWTPLNPSDKEAEDVEKFGSQTPM FT KRAAQPEEIAPAYVFLASPQMSSYITGEILPIVGGY" FT gene 104028..104471 FT /locus_tag="SMa0189" FT CDS 104028..104471 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0189" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q930U5" FT /protein_id="AAK64757.1" FT /translation="MRTDLVNRPQDGSAGRSALLVASAVNAVAAIYHIIGGTPEVMYPV FT YSANLPPSSAGVLDILWYQMAALIVGSAVATLVAAFRSDWRWPVAWIIGGHFLVVSGIC FT LFFTFVWFGNPWGLIQWAIFGPVGLIIFWAAARPAERAGAPTL" FT gene 104560..105189 FT /locus_tag="SMa0190" FT CDS 104560..105189 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0190" FT /product="putative transcriptional regulator" FT /note="Has weak similarity to TetR family regulators, FT family membership" FT /db_xref="GOA:Q930U4" FT /db_xref="InterPro:IPR012287" FT /db_xref="UniProtKB/TrEMBL:Q930U4" FT /protein_id="AAK64758.1" FT /translation="MADKQGGPTKADWVAAGLSALTAGGIEAVRVERLAVILGVSKGPF FT YWRFKNRGELLEAIIEFWKRDFTADLIEQTSHFDTPRERLEALAELAVVSTSGALDVAK FT TECALRAWAAQDPLPRAAVREVDAMRTKHLTEEFKLLGAPHPLAEQLAKAIYLALLGLY FT TVRQYTPELADEQSYLTAVRIALDAAQIQSHSTEASAAKSRLEPDI" FT gene complement(105799..106329) FT /locus_tag="SMa0191" FT CDS complement(105799..106329) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0191" FT /product="conserved hypothetical protein" FT /note="Contains a domain, pfam05146, DUF704, Aha1 domain; FT The function of this presumed domain is unknown; It is FT found in a range of bacterial as well as eukaryotic FT proteins; This domain is found in Aha1, which is found to FT interact with Hsp90; It is not certain if this interaction FT is mediated by this domain" FT /db_xref="GOA:Q930U3" FT /db_xref="InterPro:IPR013538" FT /db_xref="UniProtKB/TrEMBL:Q930U3" FT /protein_id="AAK64759.1" FT /translation="MTADKISPDMLRFERILAAPAATVWQYLVDPELRARWFMSGPTDL FT QVGGAFGLTMDHDRLSDEVVPTPDRYKPYVGHRWHERITRYEPPHLLAFTWEDGKAGEV FT TFALTEIDSGTTRLVLTHTGLRGSEDALNFGGGWHAHLAVLEKRIAGISIPDFWALHAV FT AEREMEIALVSEA" FT gene complement(106326..106652) FT /locus_tag="SMa0193" FT CDS complement(106326..106652) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0193" FT /product="conserved hypothetical protein" FT /note="conserved hypothetical protein, weak similarity to FT helix-turn-helix domain of ArsR family of transcriptional FT regulators" FT /db_xref="GOA:Q930U2" FT /db_xref="InterPro:IPR001845" FT /db_xref="UniProtKB/TrEMBL:Q930U2" FT /protein_id="AAK64760.2" FT /translation="MVDEKLTLTFAALADPTRRGMLAALTSGEKPISELARPYQMTLAG FT AAKHVAILARAGLIERRKVGRQNICRLNAGNLKEANDWLAQWQRFWNVRLDALEKALKE FT ELSQ" FT gene complement(106949..107863) FT /locus_tag="SMa0196" FT CDS complement(106949..107863) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0196" FT /product="gluconolactonase" FT /EC_number="3.1.1.17" FT /note="Best similarity to gluconolactonase, FUNCTION: FT Hydrolyzes the gluconolactone formed by glucose-fructose FT oxidoreductase, and that formed in aerobic conditions by FT the glucose dehydrogenase present, CATALYTIC ACTIVITY: D- FT glucono-1,5-lactone + H(2)O = D-gluconate, PATHWAY: FT Sorbitol metabolism, SUBUNIT: Homodimer, SUBCELLULAR FT LOCATION: Periplasmic (Probable), CAUTION: It is possible FT that in some cases Met-40 is the initiator in this case the FT expressed enzyme would remain cytoplasmic, specificity FT unclear" FT /db_xref="GOA:Q926I2" FT /db_xref="InterPro:IPR005511" FT /db_xref="UniProtKB/TrEMBL:Q926I2" FT /protein_id="AAK64761.1" FT /translation="MAEASIYEIHDPRFRQMIVTSAGLDELYSGCRWAEGPVWFNDANQ FT LLWSDIPNQRILRWTPEGGVSVYRQPSNFTNGHTRDRRGRLISCEHGTRRVTRTEVDGS FT ITVLADRFEGRRLNSPNDVVVKSDGTIWFTDPTYGIMSDYEGYHADPEQPTRNVYRLDP FT ETGELSAVVTDFTQPNGLAFSPDEKILYVADSSASHDDRLPRHIRAFDLTDGGRLANGR FT VFCVIDKGIPDGIRTDANGNLWSSAGDGVHCFDTAGKLIGKIRVPQTVANLTFGGPRRN FT RLFIAATRSLYSVYVAVTGSQVP" FT gene complement(107878..108825) FT /locus_tag="SMa0197" FT CDS complement(107878..108825) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0197" FT /product="ABC transporter, permease" FT /note="Likely transports galactose and, to a lesser extent, FT L-arabinose, glucose, D-arabinose, L-fucose and D- fucose, FT high confidence in function and specificity" FT /db_xref="GOA:Q930U1" FT /db_xref="InterPro:IPR001851" FT /db_xref="UniProtKB/TrEMBL:Q930U1" FT /protein_id="AAK64762.2" FT /translation="MNALIRQFGKPWVWSWLAAFIVWFLTIMVTGGAGTLGLSQAALTF FT AAFSVIVGIGQMFVITLGPGNIDLSVPATMTLAGTVALKLMNVENGMVLPGLLLAVFIG FT LGVGLCNYTLIKALRIPPIIATLSMSFVVQSGAIWTNRGLRIKPPSVLAEFTTTNTLGV FT PNVAIVAVLISVLAWILLEKTIYGRWISAIGQSMPAARMAGIPVDGTRFVTYLFCAVLA FT SISGYLLACFSGGAALNMGAEYLLMSIAVVVIGGTAVAGGDSNVPGIWGASLFMFLVVS FT MLNTYGLGAGIRLIMTGLIIISVIMLAGGRRGMR" FT gene complement(108822..109769) FT /locus_tag="SMa0198" FT CDS complement(108822..109769) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0198" FT /product="ABC transporter, permease" FT /note="Likely transports galactose and, to a lesser extent, FT L-arabinose, glucose, D-arabinose, L-fucose and D- fucose, FT high confidence in function and specificity" FT /db_xref="GOA:Q930U0" FT /db_xref="InterPro:IPR001851" FT /db_xref="UniProtKB/TrEMBL:Q930U0" FT /protein_id="AAK64763.1" FT /translation="MTFRLSSDAIRLVIPALSLSLLLAAVFWLQPRAMSYIGLNLLFNL FT AVPIALATIAQMLVMAVNDLDLSMGAFVSFVACVTATFLRDAPAIGILILAGAVAAYAA FT IGVVIHLRNLPSIVVTLGMSFVWGGLAVLLLPAPGGQAPDWVRWLMTVKPPLAPMAIVA FT SIIIAVIAHFIVKRSSLGVLIRGVGGNQRSVERAGWSIVAARATAYALAGLFAVLAGIA FT LVGLTTSADANIALRYTLLSIAGVILGGGEFTGGRVSPIGAVIGALTLTLASSFLSFLR FT ISPDWQIGAQGAILIIVLALRLMLNRLERREKRR" FT gene complement(109766..111229) FT /locus_tag="SMa0199" FT CDS complement(109766..111229) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0199" FT /product="ABC transporter, ATP-binding protein" FT /note="Likely involved in transport of galactose and, to a FT lesser extent, L-arabinose, glucose, D-arabinose, L-fucose FT and D-fucose, high confidence in function and specificity" FT /db_xref="GOA:Q930T9" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:Q930T9" FT /protein_id="AAK64764.1" FT /translation="MMASSMDDVAKAIIAVDGAKVSFGAVKALDGVTLRVMPGECVGLV FT GHNGAGKSTIVSVINGGLTPHHGIVTSDGERQERYGINAARDRGVRCVFQELSLCPNLS FT IVENTRLVHRTLGGFGWRLRAAKIIEKSLDAVFPGHGIDSGRTVGDLSIAERQMVEIAL FT AFSDAGTPARLVILDEPTSSLDASLARQMLDHVRRFIAAGGSVIFISHILHEILETADR FT IVVMKDGRVVAERPAHRFDHHGLVEAMGSVAKAETRQRPVCDQPAAPVILSHEAAGIPF FT TARTGEIIGLAGLAGHGQTELLLALHAARSGNWLPQGNPLVTFVAGDRRLNGVFELWSI FT LRNFSIASLGDMSRRGLVLEAGEKTRGTAWKERIEIRTPDLNNRILSLSGGNQQKVLFA FT RALATRAPIVLMDDPMRGVDVGTKQEVYAIIREEAAAGRTFIWYSTEMDEVCLCDRVYV FT FREGRITAELGGDAVDEANIISASFEGTA" FT gene complement(111288..112304) FT /locus_tag="SMa0203" FT CDS complement(111288..112304) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0203" FT /product="ABC transporter, periplasmic solute-binding FT protein" FT /note="Likely transports galactose and, to a lesser extent, FT L-arabinose, glucose, D-arabinose, L-fucose and D- fucose, FT high confidence in function and specificity" FT /db_xref="UniProtKB/TrEMBL:Q930T8" FT /protein_id="AAK64765.2" FT /translation="MTIRKMLLASAAITCAAMPASAFADTSAKKIALSNNYAGNSWRQA FT MLTSWEKVTGEAVKAGIVASADAFTTAENQATEQAAQIQNMILQGYDAIVLNAASPTAL FT NGAVKEACDAGITVVSFDGIVTEPCAWRIAVDFKEMGRSQVEYLSNKLPDGGNLLEIRG FT LAGVFVDDEISAGIHEGVKQFPQFKIAGSVHGDWAQDVAQKAVAGILPSLPDIVGVVTQ FT GGDGYGAAQAIAATDRKMPIIVMGNREDELKWWKEQKDANGYETMSVSIAPGVSTLAFW FT VAQQILDGKEVKKDLVVPFLRIDQDNLEANLANTQAGGVANVEYTQEDAIKVIESAK" FT gene 112578..113825 FT /locus_tag="SMa0204" FT CDS 112578..113825 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0204" FT /product="sensor histidine kinase" FT /note="Best similarity to COG4585, Signal transduction FT histidine kinase, mostly in carboxy terminus; Strong FT similarity across entire length to proteins in FT Agrobacterium tumefaciens and Rhizobium etli; Amino FT terminus is not so well conserved in other histidine FT kinases and has weak similarity to COG2203, FhlA, FOG: GAF FT domain, conserved hypothetical protein" FT /db_xref="GOA:Q930T7" FT /db_xref="InterPro:IPR003018" FT /db_xref="UniProtKB/TrEMBL:Q930T7" FT /protein_id="AAK64766.1" FT /translation="MLHSAPAAMFDHYLGISRLLAGQLDFRSAIRSVAAEVAHIIPHDH FT LDVCVLLEDGNYHTAYETGIETAWGDLAGAPVVNSPIRSLLWGEVDFLLADDAMTDPRF FT HFDGAFKRPIVEQSLRSRLHVPMKVQGAIIAALSCSSQEAGAYTMEDVERARIIADLLT FT PYFFALRAAEQAQRSAIVEAEARAREEGLRLGALKLTEALEQERQRIGMDLHDQTLADL FT TRLARRIDRLSRNGEVAPEALEPVSRSLQHCMQDLRQIIEQAKPSVLQLFGLTQAIEHH FT LDRSTRDTGSIIEWGLADETNGALERLEPTVIVALFRIAQEAINNAVRHAAPLAVKVRL FT DADDDRLSIEISDDGTGLAKTRGRIGEGIDNMKTRARLISARFTIGPGHNNRGTVVRVV FT LPLAPHDSGSIEERAE" FT gene 113822..114544 FT /locus_tag="SMa0206" FT CDS 113822..114544 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0206" FT /product="Response regulator" FT /note="Contains cd00156, REC, Signal receiver domain; FT originally thought to be unique to bacteria (CheY, OmpR, FT NtrC, and PhoB), now recently identified in eukaroytes ETR1 FT Arabidopsis thaliana; this domain receives the signal from FT the sensor partner in a two-component systems; contains a FT phosphoacceptor site that is phosphorylated by histidine FT kinase homologs; usually found N-terminal to a DNA binding FT effector domain; forms homodimers, Very similar to proteins FT in Agrobacterium tumefaciens and Rhizobium etli, FT hypothetical protein" FT /db_xref="GOA:Q930T6" FT /db_xref="InterPro:IPR001789" FT /db_xref="UniProtKB/TrEMBL:Q930T6" FT /protein_id="AAK64767.1" FT /translation="MKVLIVEDDPLHRSYLHEAVNAALPECDTVIEAENGTVGEKLARE FT HKSAHIVMDLQMASRNGIEAARTIWKERPETRILFWSNYSDEAYVRGVSRIVPDGAAYG FT YVLKSASDERLKLALRSIFIESQCVIDREVRGLQQKSLGQTNGFNDSEYEILVDIALGL FT TDRAIARRRGLSLRSVQNRLQQLYDKLDVYQAASDDNDDGRFNLRARAITIAFLRKLLN FT YSALERAEAELQEWLDGK" FT gene 114669..115757 FT /locus_tag="SMa0209" FT CDS 114669..115757 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0209" FT /product="conserved hypothetical protein" FT /note="Very similar to proteins in Agrobacterium FT tumefaciens and Rhizobium etli" FT /db_xref="InterPro:IPR009213" FT /db_xref="UniProtKB/TrEMBL:Q930T5" FT /protein_id="AAK64768.1" FT /translation="MLKSIDLMYQAMLAELRQRSLDAAWSADFPSDGRFTPLTVKQRRY FT WYFDRPDGKGGRTRDYVGPASDPEIAKRVEEFKAQKDDLQARRRMVSTLTREGGMVAPD FT RMSGDVIEALASGGLFRLRGILIGTIAFHTYAGVLSVRLPGHSIMTGDADVAQDFAVSR FT EVGDSMPPILQLLQSVDPTFRPVPHRSGQAAFSSFQNKNSYKVEFLTNRSSDDYMDQPA FT RMPALGGASADPLRFLDFLIRDPVRTVVLHKSGIPVTVPDPSRYAVHNLIVASRRHNDG FT QSAVKRDKDIRQAGILFEAILQTRRSSDLALVYNEAWQRGDAWRAGIRAGAAMLPDEGR FT KHLKACLRTGAVEIDEDVSLPF" FT gene complement(115852..116118) FT /locus_tag="SMa0210" FT CDS complement(115852..116118) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0210" FT /product="hypothetical protein" FT /note="similar to S; meliloti hypothetical protein FT SMc04866" FT /db_xref="UniProtKB/TrEMBL:Q930T4" FT /protein_id="AAK64769.2" FT /translation="MDVQKAGMARLLLAAPDVRDSAWMIHDLTFLKLCEVYEHACLRRD FT VLRCAASIDDAALLKSEEECKSLEAAAIAYIRERQKFSGLGSH" FT gene complement(116261..116455) FT /locus_tag="SMa0211" FT CDS complement(116261..116455) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0211" FT /product="hypothetical protein" FT /note="Similar to short regions found in S; meliloti FT hypothetical proteins SMb20517, SMb20545 and SMb21395" FT /db_xref="UniProtKB/TrEMBL:Q930T3" FT /protein_id="AAK64770.1" FT /translation="MLGDWDMDDRDTNHNGEKNSASDLLEIAAQLAALAEDIKTLAAMP FT IEQISTLIEPGDRPEASSE" FT gene complement(116673..117515) FT /gene="kduI" FT /locus_tag="SMa0214" FT CDS complement(116673..117515) FT /codon_start=1 FT /transl_table=11 FT /gene="kduI" FT /locus_tag="SMa0214" FT /product="putative KduI DKI isomerase" FT /note="4-deoxy-L-threo-5-hexosulose-uronate-ketol- FT isomerase,function unclear" FT /db_xref="GOA:Q930T2" FT /db_xref="InterPro:IPR007045" FT /db_xref="UniProtKB/Swiss-Prot:Q930T2" FT /protein_id="AAK64771.2" FT /translation="MTISVSVRQVVGPEDAARRNTQGLRDGFVIEALFQPGRANLTYSH FT LDRMIVGGVVPAADRLVIDRVAETGTQRFLDRREAAIINIGGSGTVSVGDKDHVLGFQE FT ALYVGMGGGALGFASDDANAPALFYVLSAPAHRSCPTVHITRDMAKKLSLGSAEESNAR FT TINQYVHPDVCESCQLLVGLTMFEPGSVWNTMPAHVHDRRMEVYLYFGMQEATRIFHFM FT GEPGETRHVVLKNHEAVLSPGWSIHSGAGTGRYAFIWAMAGDNMSFTDMDKVPMEALR" FT gene complement(117547..118287) FT /locus_tag="SMa0216" FT CDS complement(117547..118287) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0216" FT /product="ABC transporter, ATP-binding protein" FT /note="Has similarity to cd03216, ABC_MOS_Domain1, The FT domain I of carbohydrate uptake proteins that transport FT only monosaccharides (MOS); The MOS family systems are FT involved in the uptake of monosaccharides (pentose and FT hexoses) like arabinose, D-allose, galactose, ribose and FT xylose; The typical organization of these systems includes FT Binding Protein (BP), Integral Membrane (IM) and ABC FT subunits; The ABC subunit is made up of two homologous FT halves, suggesting that a primordial gene duplication and FT subsequent fusion event occurred in the generation of the FT ancestral MOS system, Also similar to LivG, ABC-type FT branched-chain amino acid transport systems, ATPase FT component, family membership" FT /db_xref="GOA:Q930T1" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:Q930T1" FT /protein_id="AAK64772.1" FT /translation="MMSTPNLLELHNISKSFGALTALRNLSFHIGEGEVVGLLGDNGAG FT KSTTVNLISGIHKPTDGYLSVDGKKTTFSCRSDSADAGIETIYQHTALVDSLSITRNIF FT MGRELTDRFGFLRQREMRDIAMEVLQNAVHISGIDSPDTLVGNLSGGQKQAVAIARAVY FT FKKRVLLLDEPTSALSVRETEALLNQVLKLKAENVSSVLVTHNLYHAYQVCDRFVIMSH FT GTKVFDVQKADTTISQLTEYVVLT" FT gene complement(118284..119363) FT /locus_tag="SMa0217" FT CDS complement(118284..119363) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0217" FT /product="ABC transporter, permease" FT /note="Hypothetical protein" FT /db_xref="GOA:Q930T0" FT /db_xref="InterPro:IPR001851" FT /db_xref="UniProtKB/TrEMBL:Q930T0" FT /protein_id="AAK64773.2" FT /translation="MGARRRARPVPRSPTIECQTVTPVLAESAAPRSRTQRQSILKQIM FT GMPAGAIFLVFMTLQIVCIAGALLYPDEFRYLSPQNLTILMKAIPVLGCLALGAGVLMI FT AGEFDLSIGSVYTFTAVLMASLVNAGLSAFIAAPIAILTGLLIGSLNGHITLRFGLPSF FT IVTLGGLLFWRGAVLLYNGAVQVRFDPEPVFTSLFSGTLFGVNAAFIWIVLFVTGFHLL FT LHRHRFGNHVFATGGNRGAAEAIGINTSRVKLIAFAIAGGMAAVAGILATARVGSVQPG FT QGAGLELQAIAACVIGGLSLRGGRGSIIGIFLGVLLIHTITDVLLLLRAPGFYLDMFIA FT TLIVLAAIFNHLIERRGLA" FT gene complement(119373..120323) FT /locus_tag="SMa0218" FT CDS complement(119373..120323) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0218" FT /product="ABC transporter, periplasmic solute-binding FT protein" FT /note="Specificity unclear" FT /db_xref="InterPro:IPR001761" FT /db_xref="UniProtKB/TrEMBL:Q930S9" FT /protein_id="AAK64774.2" FT /translation="MKLTRLRTAALAAGLATLLTSTALAADVKATMIIYLDPSVQFFNP FT VVKGAQDAAAQFGVDLDVQYANNDPVRQNDLIESATASGVDGIAVAISSSDAFDESICA FT AVKAGIIVIGFNNDDLDGAKGNCRQAYVGMDELASGYELGNRMIKEFGLKSGDVVFNPR FT EIPEASFAVARGGGIEKAMTENGIKVETVRAGLDPAEAQNIIAQFLIANPNVKALFGTG FT SVTSTVGAGAIKDAGVDIPFGGFDLAVEIVNAVESGAMYATMDQQPYLQGYYPIAQIAL FT AKKYGLTPTDIDTGQGAFLDKTRIGSVKPLIGSYR" FT gene complement(120444..121958) FT /locus_tag="SMa0220" FT CDS complement(120444..121958) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0220" FT /product="NAD-dependent aldehyde dehydrogenase" FT /note="CATALYTIC ACTIVITY: An aldehyde + NAD(+) + H(2)O = FT an acid + NADH, specificity unclear" FT /db_xref="GOA:Q930S8" FT /db_xref="HSSP:1BXS" FT /db_xref="InterPro:IPR016162" FT /db_xref="UniProtKB/TrEMBL:Q930S8" FT /protein_id="AAK64775.1" FT /translation="MLSNFIAPDSNDPRLRIKSRYQMLVDGKSVDAASGSTIDRVSPGH FT AGEVVGTWPEASADDVRKAVAAARKAFDAGPWPRMSGAERSRLMFKVADLILARQEELA FT LIESLEVGKPIAQARGEIGFCADLWSYAAGQARALEGQTHNNIGDDRLGLVLREPVGVV FT GIITPWNFPFIIASERVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVV FT TGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKLGEIAARTVKRVGLELGGKGPQIVFADA FT DLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALMERLLDISRKVAFGDPLNERTK FT IGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYAPTVFAGVTPDMSIARE FT EIFGPVLSTLTFKTADEAVALANATEFGLSASVWSTNLETALQTIRRIRAGRCWINSVI FT DGTPELPIGGYKKSGLGRELGRYGFDEYSQFKGVHVTLGRPAPWFT" FT gene 122050..122778 FT /locus_tag="SMa0222" FT CDS 122050..122778 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0222" FT /product="Transcriptional regulator, GntR family" FT /note="GntR, C-terminal, Bacterial regulatory proteins, FT gntR family, specificity unclear" FT /db_xref="GOA:Q930S7" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q930S7" FT /protein_id="AAK64776.1" FT /translation="MVVQIGCQRMTAAKDMNLESLKIDTGETAAAQVERDLRESIIRLE FT LAPGMRLSEQEIATRMGVSRQPVREALIALGKSKLVDIRPNRGTVVVRISARQMMEARF FT VREAIEVAVARRASETFDSWTRRKIDTILARQKAANEAHDHNAFRREDEQFHIAIAEGA FT GCGLAWNAVSDIKAHMDRVCNLQLRHPDSMKKLIAEHEAIITAIDARDADAAAAAMRSH FT LNGILADLPQIEADNPDLFE" FT gene complement(122852..123637) FT /locus_tag="SMa0223" FT CDS complement(122852..123637) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0223" FT /product="Transcriptional regulator, TetR family" FT /note="Family membership" FT /db_xref="GOA:Q930S6" FT /db_xref="InterPro:IPR012287" FT /db_xref="UniProtKB/TrEMBL:Q930S6" FT /protein_id="AAK64777.2" FT /translation="MRCDRRCGGVKYRSWAQILCERHAKACRFGRRREAGGWLRLKASS FT YILQVSYFWYIVMSSRPNKTQPPAKRVRLSREQRRRQLLDLAWHLVREEGSDALTLPRL FT SQEAAVAKPVVYDHFGTRNGLLIALYRDFDARQTEMIDAALAGSGPTLEDRARVIATSY FT VDCVLAQGREMPGVLAALAGSPELEAVKRDYQLAFIEKCRRALAAFVGRRGIEPAGFWA FT MLGAANALSDAASTGEITAEQAQDELFETIVAMIERSHP" FT gene 123589..125061 FT /locus_tag="SMa0224" FT CDS 123589..125061 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0224" FT /product="Permease, MFS" FT /note="SUBCELLULAR LOCATION: Integral membrane protein FT (Potential), SIMILARITY: Belongs to the major facilitator FT superfamily; EmrB family, family membership" FT /db_xref="GOA:Q930S5" FT /db_xref="InterPro:IPR011701" FT /db_xref="UniProtKB/TrEMBL:Q930S5" FT /protein_id="AAK64778.2" FT /translation="MPMTDTSLPRTVDRTAWLGLIAILPLVLLVAMDGSILYLAMPHVT FT SALMPTADQALWILDIYGFVVGSLLIAFGNIGDRYGRLKLIITGAAVFGAGSLGAAYSQ FT TPEQLIASRALMGLGGATLLPSGLAIVSALFPDPRLRAQAIGIFAATFAAGFAIGPLIG FT GMLLRQFAWGAVFLINVPVVIGFMIGAPILLREVRSTVGGSIDLASLVLSFAGILLFTY FT SLKNAAAYGFTPTQIVAGAAGIFALALFARRQTKLEYPLLDLGLFRDRIFSIAILTGLL FT SLVVWSAAGYLSGVYLQSVLGIDVFAAALLTLPGAIVLTATCVATARIVERIGRKTALV FT ATHLLIGAGVFLLLFTTTETGIAVFIASTMIAGIGYGLSFSLVADIAVSAVPANRAGAA FT GSIAETSNELGNALGISLLGSLATLSFRLFGPGVAGTLDETLDQPGLAHQSLIQAQEAF FT LTGMHVAIGTGGLLTLAVGMVAWLWLPSKLPE" FT gene 125261..126253 FT /locus_tag="SMa0226" FT CDS 125261..126253 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0226" FT /product="dehydrogenase" FT /note="SIMILARITY: To A.liquefaciens L-sorbosone FT dehydrogenase, function unclear" FT /db_xref="GOA:Q930S4" FT /db_xref="InterPro:IPR011042" FT /db_xref="UniProtKB/TrEMBL:Q930S4" FT /protein_id="AAK64779.2" FT /translation="MSVSFPRAGFLALVMVVALAFGVPFDAARGELLARVPAAREMAVC FT GDTLFVGTKGSSVYAVSLPGGRARRVASGFSNANGVACSRGRLFVASRSSITAFEIGRG FT GTLSGRRDIRRDLPNSGAHSFRYIALGPDARLYVSLGSPCNICVPGGLQGTIVSMNQDG FT SDLRRVAWGVRNSVGFDWRGGRMFFTDNGADRMGDDVPPDELNALRPGGFYGFPYFGGQ FT VPLTGFEDAMPPARQIPPVFNFQAHVAALGIHFFRSLGGDALVAQHGSWNRSVPVGYQV FT VRVRFRGGRPVSAATFLRNVGRPVDVKEAPDGAILVSDDAGGAIHIFRR" FT gene 126420..127766 FT /gene="gdhA" FT /locus_tag="SMa0228" FT CDS 126420..127766 FT /codon_start=1 FT /transl_table=11 FT /gene="gdhA" FT /locus_tag="SMa0228" FT /product="NADP-specific glutamate dehydrogenase" FT /function="Glutamate dehydrogenase/leucine dehydrogenase" FT /EC_number="1.4.1.4" FT /note="CATALYTIC ACTIVITY: L-glutamate + H(2)O + NADP(+) = FT 2-oxoglutarate + NH(3) + NADPH, SUBUNIT: Homohexamer, FT SIMILARITY: Belongs to the Glu/Leu/Phe/Val dehydrogenases FT family, specificity unclear" FT /db_xref="GOA:Q930S3" FT /db_xref="HSSP:1AUP" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q930S3" FT /protein_id="AAK64780.1" FT /translation="MNVDEKLEPILAEVLRRNGGEHEFHQAVREVLESLGRVIAKHPRY FT AENALIERICEPERQIIFRVPWVDDKGQVQINRGFRVQFNSALGPYKGGIRFHPSVNIG FT IIKFLGFEQTFKNALTGMPIGGGKGGSDFNPRGRSDGEIMRFCQSLMTELHRHLGEYTD FT VPAGDIGVGGREIGYMFGQYKRLTNRYEAGVLTGKALFYGGSRARKEATGYGATYFVQR FT MIATKGLDFEGKRVTVSGSGNVAIYTMEKVIEFGGKIVACSDSNGYVVDEDGIDLELVK FT EIKEVRRERISEYARLKGAGTHYIEAGSVWDVPCDVAMPSATQNELTGKDARTLVKNGV FT LAVGEGANMPCTPEAVRIFQEAGVLFAPGKAANAGGVATSALEMQQNASRDSWTFEQTE FT ARLATIMQAIHDRCAETAEEYGTPGDYVLGANIAGFVRVAEAMDALGVI" FT gene 128085..128507 FT /locus_tag="SMa0229" FT CDS 128085..128507 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0229" FT /product="conserved hypothetical protein" FT /note="Weak similarity to the GreB family of transcription FT elongation factors, FUNCTION: Necessary for efficient RNA FT polymerase transcription elongation past template-encoded FT arresting sites; The arresting sites in DNA have the FT property of trapping a certain fraction of elongating RNA FT polymerases that pass through, resulting in locked ternary FT complexes; Cleavage of the nascent transcript by cleavage FT factors such as greA or greB allows the resumption of FT elongation from the new 3'terminus; GreA releases sequences FT of 2 to 3 nucleotides (By similarity), SIMILARITY: Belongs FT to the greA/greB family, family membership" FT /db_xref="GOA:Q930S2" FT /db_xref="InterPro:IPR001437" FT /db_xref="UniProtKB/TrEMBL:Q930S2" FT /protein_id="AAK64781.1" FT /translation="MSSIMVSSNLPLPFIGATDYRLLSRLAYQALSRDFDIAAELIEKL FT ERPCVLPDDQVPPDVVKIGSIVTCEVEDGPCRTFSLVYPDDVDAEKGRISVLTPVGVAL FT LGLRPGQAVEWFSRDGQRNHLIVVRVEDDVKDELAL" FT gene 128727..129278 FT /locus_tag="SMa0232" FT CDS 128727..129278 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0232" FT /product="conserved hypothetical protein" FT /note="weak similarity to GreA family of transcriptional FT elongation factors" FT /db_xref="UniProtKB/TrEMBL:Q930S1" FT /protein_id="AAK64782.2" FT /translation="MTRRKLERCAMSREAFCQLTAGDLNILMSMLDETGHTESFTILLR FT EKLNYASVFFREDIPENVVTLDTQVGYTVNGVRTGPHLLVRNAAGRPANSAISVRTMRG FT LALLGLAVGERTEILGEDGWPETLAVERIVFQPESEARLKQTSTEPVQLIDHAPQVVNF FT RPRPRKAAIPHDDDPGPSAA" FT gene complement(129300..130691) FT /gene="otsA" FT /locus_tag="SMa0233" FT CDS complement(129300..130691) FT /codon_start=1 FT /transl_table=11 FT /gene="otsA" FT /locus_tag="SMa0233" FT /product="OtsA trehalose-6-phosphate synthase" FT /EC_number="2.4.1.15" FT /note="FUNCTION: Appears to play a role in controlling and FT restricting the influx of sugar into glycolysis, probably FT at the level of hexokinase; Necessary for trehalose-6- FT phosphate synthase and phosphatase activities, CATALYTIC FT ACTIVITY: UDP-glucose + D-glucose 6-phosphate = UDP + FT alpha,alpha-trehalose 6-phosphate, SUBUNIT: Trehalose FT synthase/phosphatase complex contains three or four FT polypeptides of 56 kDa (TPS1), 102 kDa (TPS2), 115 kDa FT (TPS3) and 123 kDa (TSL1), SIMILARITY: Belongs to the FT glycosyltransferase 20 family, high confidence in function FT and specificity" FT /db_xref="GOA:Q930S0" FT /db_xref="HSSP:1UQT" FT /db_xref="InterPro:IPR012766" FT /db_xref="UniProtKB/TrEMBL:Q930S0" FT /protein_id="AAK64783.1" FT /translation="MSRLVIVSNRVPVPDKGGIAPAGGLAVALKVALEEHGGIWMGWSG FT RSSGENEPEPLAQLHQGNITYALTDLTDTDVGEYYHGFANRVLWPICHYRLDLAEYGRK FT EMAGYFRVNRFFAHRLAPLVRPDDVIWVHDYHLIPLAAELRQMGLKNRIGFFLHIPWPP FT ADVLFTMPVHEEIMRGLSHYDVVGFQTDHDLENFAGCLRREGIGDELGGGRFSAYGRVF FT KGGIYAIGIETAAFAEFAKKALTNKTVRKARESIEHRSLIIGVDRLDYSKGITQRIDAF FT ERFILANPAQQGRVTYLQITPKSRSEVPEYEAMQRTVAEQAGRVNGALGAVDWVPIRYI FT NRSVGRHILAGLYRLGKVGLVTPLRDGMNLVAKEYVAAQDPDDPGVLVLSRFAGAARDL FT KGALLVNPYDIEGTANAMARALSMPLEERKDRWKTMMDHLLEHDVSRWCRDFLNDLATS FT PDPSG" FT gene complement(131106..132884) FT /locus_tag="SMa0235" FT CDS complement(131106..132884) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0235" FT /product="dihydroxy-acid dehydratase" FT /EC_number="4.2.1.9" FT /note="Similar to dihydroxy-acid and 6-phosphogluconate FT dehydratases, specificity unclear" FT /db_xref="GOA:Q930R9" FT /db_xref="InterPro:IPR000581" FT /db_xref="UniProtKB/TrEMBL:Q930R9" FT /protein_id="AAK64784.1" FT /translation="MTDKPQRRLRSQDWFDNPDHIDLTALYLERFMNYGVTPEELRCGK FT PIIGIAQSGSDLTPCNRVHMDLAKRVRDGIRDAGGIPIEFPTHPIFENCKRPTAALDRN FT LAYLGLVEILYGYPLDGVVLTTGCDKTTPSALMAASTVDIPAIVLSGGPMLDGWHEGDL FT VGSGTVIWRMRRKLAAGEIDREEFMQAALDSAPSVGHCNTMGTASTMNAMAEALGMSLT FT GCGAIPAAYRERGQMAYRTGRRAVELVFEDLKPSDILTREAFLNAIRVNSAIGGSTNAQ FT PHLAAMAKHAGVELYPDDWQVHGFDIPLLANIQPAGAYLGERYHRAGGTPAIMWELLKA FT GKLDGGCRTVTGRTVAENLEGREPTDREVIRPFDEPLKEKAGFLVLKGNLFDFAIMKMS FT VVSDDFRKRYLQEPGREGVFEGKAVVFDGSEDYHKRINDPELDIDENTILVIRGAGPLG FT WPGSAEVVNMQPPDHLLKRGIRSLPTIGDGRQSGTADSPSILNASPESAAGGGLAWLRS FT GDVIRIDFNLGRCDMLVSDEDIERRKADGIPAVPADATPWQRIYRKSVTQLSDGAVLEG FT AADFRQIAKNMPRHNH" FT gene complement(132893..133774) FT /locus_tag="SMa0237" FT CDS complement(132893..133774) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0237" FT /product="dehydrogenase" FT /note="best similarity to 3-hydroxyisobutyrate FT dehydrogenases, family membership" FT /db_xref="GOA:Q930R8" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q930R8" FT /protein_id="AAK64785.1" FT /translation="MSGKTKIAFLGTGLMGAPMARRLLGAGFSVTVWNRDAAKAEPLAA FT DGADIAASPADAVAGAAIVFTMLTNGQAVSEVLFERGVADSLAEGRIVVDCSSIAPQIA FT REHARRLAEKGIRHLDAPVSGGVVGAAAGTLAIMAGGDGAAVESLKEVFAVLGRVTHVG FT PSGAGQVCKLANQQIVAVTIGAVAEAMVLVEAGGASRAAFRDAIRGGFAESRILELHGA FT RMVERNFAPGGASNNQLKDLNAVMAMADELSLELPLTRQVRQEFADFVESGGGEQDHSG FT LLLQLEKLNPRN" FT gene complement(133771..134754) FT /locus_tag="SMa0241" FT CDS complement(133771..134754) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0241" FT /product="epimerase" FT /note="pfam01370, Epimerase, NAD dependent FT epimerase/dehydratase family; This family of proteins FT utilise NAD as a cofactor; The proteins in this family use FT nucleotide-sugar substrates for a variety of chemical FT reactions; Similar to SMb20663 of S; meliloti pSymB, family FT membership" FT /db_xref="GOA:Q930R7" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q930R7" FT /protein_id="AAK64786.1" FT /translation="MHILIIGAAGMVGRKLTQRLVKDGTLGANSVEKLTLVDVVAPERP FT QGFAGTVVAREGDLSASGEAEKLVEGRPDVIFHLAAIVSGEAELDFDKGYRINLDGTRY FT LFDAIRLAHDQDGYKPRLVFTSSIAVVGAPLPFPIPDDYHLTPLTSYGTQKAICELLLS FT DYSRRGFFDGIGIRLPTICIRPGKPNKAASGFFSNILREPLVGQEAVLPVSEDVRHWHT FT SPRSAVGFLIHGATINLEKVGPRRNLSMPGLSATVGEQIEALRRVAGEKAVQLIRREPD FT EMIMKMVAGWAPGFEAKRATELGFTAEKSFDEIIRVHIEDELGGKL" FT gene 134949..136394 FT /locus_tag="SMa0244" FT CDS 134949..136394 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0244" FT /product="Dehydrogenase, FAD-dependent" FT /note="Contains pfam01565, FAD_binding_4, FAD binding FT domain; This family consists of various enzymes that use FT FAD as a co-factor, most of the enzymes are similar to FT oxygen oxidoreductase; One of the enzymes Vanillyl-alcohol FT oxidase (VAO) has a solved structure, the alignment FT includes the FAD binding site, called the PP-loop, between FT residues 99-110; The FAD molecule is covalently bound in FT the known structure, however the residue that links to the FT FAD is not in the alignment; VAO catalyses the oxidation of FT a wide variety of substrates, ranging form aromatic amines FT to 4-alkylphenols; Other members of this family include FT D-lactate dehydrogenase, this enzyme catalyses the FT conversion of D-lactate to pyruvate using FAD as a co- FT factor; mitomycin radical oxidase, this enzyme oxidises the FT reduced form of mitomycins and is involved in mitomycin FT resistance; This family includes MurB an UDP-N- FT acetylenolpyruvoylglucosamine reductase enzyme FT EC:1.1.1.158; This enzyme is involved in the biosynthesis FT of peptidoglycan, family membership" FT /db_xref="GOA:Q930R6" FT /db_xref="InterPro:IPR006094" FT /db_xref="UniProtKB/TrEMBL:Q930R6" FT /protein_id="AAK64787.1" FT /translation="MTSAGTIEDAKGPAELRLALRQMLGEDIVLSETEEMLRFCRDWHG FT DVTTGTVAVIRPRSTQQVAAAVKACRELGLSIVPQGGNTGLVLGAIPDAPERQVVLSLS FT RMNRIRKIDPADFSAVVESGCILSELKDAIAKMGMFFPLALGAQGSCQIGGNVSTNAGG FT VNVLRYGMTRELVLGLEVVLPDGSILEGLSTLRKDNRGIDLKQLFIGAEGTLGIITAVS FT ITLTPYPDHVATALLGLASLEDAIRLYRRARRDCCDLMSAFEFMPPLAFTLAQEAMPDL FT PIPISAEYPAYVLMEISGSGLVDVDDLMQRFLEGAMEEGLVLDGTIAASQTQARNLWLI FT REGMNEGQAKRGTHMRTDISVPLSQLASFVEEAEKAVSEALPGAVSVSYGHVGDGNVHL FT NVLPPAGSTPEERIQLIYKAKTVVNEVLDRYTGSISAEHGIGRLKRPDFDARLPATRRK FT LLTALKHAVDPEMIMNPGCQLRF" FT gene 136409..137119 FT /locus_tag="SMa0246" FT CDS 136409..137119 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0246" FT /product="Transcriptional regulator, GntR family" FT /note="Belongs to the FadR subfamily of GntR regulators; FT pfam00392, GntR, Bacterial regulatory proteins, gntR FT family; This domain comprises the N-terminal HTH- FT containing region of GntR-like bacterial transcription FT factors; At the C terminus there is usually an effector- FT binding/oligomerisation domain; The GntR-like proteins can FT be divided into six sub-families: MocR, YtrR, FadR, AraR, FT HutC and PlmA, family membership" FT /db_xref="GOA:Q930R5" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q930R5" FT /protein_id="AAK64788.2" FT /translation="MAAMDFGQISRSEHLPARIAAKIGREITEGRIAPGEKLPTEHLLA FT TTFGVSRSVVREAIAQLRNEGLVETRQGVGAFATEIERRQSLRIEQGDLANRGSFRDLF FT QLRIPLEVEAARLAAIHHTPQDLGKIDEALQQMTGAEKWTEQGIVADLAFHRAIAAATH FT NEYFLLFIGFIAERISLAINAARAAAILEEIVEVTIAEHVSIRNGVSARDPVQAEEAMR FT HHLNGAAARLDLTI" FT gene 137290..138486 FT /locus_tag="SMa0247" FT CDS 137290..138486 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0247" FT /product="conserved hypothetical protein" FT /note="Has weak, perhaps spurious, similarity to members of FT the fumarylacetoacetate (FAA)hydrolase family; This family FT consists of fumarylacetoacetate (FAA) hydrolase, or FT fumarylacetoacetate hydrolase (FAH) and it also includes FT HHDD isomerase/OPET decarboxylase from E; coli strain W; FT FAA is the last enzyme in the tyrosine catabolic pathway, FT it hydrolyses fumarylacetoacetate into fumarate and FT acetoacetate which then join the citric acid cycle" FT /db_xref="GOA:Q930R4" FT /db_xref="InterPro:IPR002529" FT /db_xref="UniProtKB/TrEMBL:Q930R4" FT /protein_id="AAK64789.1" FT /translation="MSGGFLVSFEQALSAESIQPADASSAMLVGRVWSKTAGGPCPVLI FT SEGEVFDLTPLAATISALLEIDGLVDALRDPSRFASLGSLDAFLRGEAGDLLAPADLQA FT VKAAGVTFADSMLERVIEEQAKGDPLRAQEIRGRLAPVLGDNLKGLVAGSDKAAEVKKL FT LQELGLWSQYLEVGIGPDAEIFTKAQPMSSVGCGAYIGIHPKSDWNNPEPEVVLAVTSK FT GKIVGATLGNDVNLRDFEGRSALLLSKAKDNNASCSIGPFIRLFDGAFTIEDVKQAEVS FT LVVDGKEGFKMTGISPMSAISRSPEDLVSQLLNDNHQYPDGVVFFLGTMFAPVKDRRGT FT GLGFTHEIGDRVEISTPRLGRLVNWVDHSDRCPKWSFGLGALMKNLAERGLLQAKREG" FT gene 138487..139020 FT /locus_tag="SMa0249" FT CDS 138487..139020 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0249" FT /product="TRAP-type small permease component" FT /note="May transport L-arabinose, lactose and raffinose FT based on induction pattern of the upstream gene, SMa0247, FT high confidence in function and specificity" FT /db_xref="InterPro:IPR007387" FT /db_xref="UniProtKB/TrEMBL:Q930R3" FT /protein_id="AAK64790.1" FT /translation="MQKAIDTFYKLLELLLIVLLAGMAVMVFLNVVLRYGFNSGINVSD FT EMSRYFFVWLTFIGAVVTFRENSHVGVETLVSLFGRKGRIICMILSNIVVIAVSAIFFW FT GTWKQSPINASMAAPVTGISMLWVYGIGYFTGAGVVLIALERLVRLLTGRVTEEEIAAF FT AGENMTLEQLAERT" FT gene 139020..140297 FT /locus_tag="SMa0250" FT CDS 139020..140297 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0250" FT /product="TRAP-type large permease component" FT /note="May transport L-arabinose, lactose and raffinose FT based on induction pattern of the upstream gene, SMa0247, FT high confidence in function and specificity" FT /db_xref="GOA:Q930R2" FT /db_xref="InterPro:IPR004681" FT /db_xref="UniProtKB/TrEMBL:Q930R2" FT /protein_id="AAK64791.1" FT /translation="MTLVVFIVSLLGAMAIGVPVAFSLMFCGVVLMWYMGMFNTQIIAQ FT NMIAGADTFTLLAIPFFILAGELMNAGGLSRRIIDFAIACVGHIRGGLGIVAIMAAVIM FT ASISGSAAADTAALAAILIPMMAKAGYNVPRSAGLIAAGGVIAPVIPPSMAFIVFGVAA FT NVSITQLFMAGIVPGLIMGIALVATWLLVVRKDDIQPLPRTPMKERVGATGRALWALGM FT PVIILGGIKAGVVTPTEAAVVAAVYALFVGMVIYRELKPRDLPGVILQAAKTTAVIMFL FT VCAALVSSWLITAANIPSEITGFISPLIDRPTLLMFVIMLVVLVVGTALDLTPTILILT FT PVLMPIIKQAGIDPVYFGVLFIMNTCIGLLTPPVGVVLNVVSGVGRVPLGKVIVGVTPF FT LVAQILVLFLLVLFPDIVIVPARWLH" FT gene 140349..141353 FT /locus_tag="SMa0252" FT CDS 140349..141353 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0252" FT /product="TRAP-type periplasmic solute-binding protein" FT /note="May transport L-arabinose, lactose and raffinose FT based on induction pattern of the upstream gene, SMa0247, FT high confidence in function and specificity" FT /db_xref="GOA:Q930R1" FT /db_xref="InterPro:IPR018389" FT /db_xref="UniProtKB/TrEMBL:Q930R1" FT /protein_id="AAK64792.1" FT /translation="MRKLLLATTAIAFGLSAAAPAFAEFNDRNIRVSNGINEDHPVGNG FT IKAMQACLDQKSGGKLKLTAFWGGALGGDLQATQALRSGVQEAVVTSSSPLVGIIPALG FT VFDLPFLFANAQEAYTVLDGDFGDMMNEKLEAAGLVNLAYWENGFRNLSNSVRPVTKWE FT DFEGMKVRVMQNNIFLDTFQNLGANATPMAFGEVFSALETKAIDAQENPYVTIDTSKFF FT EVQKYVTETNHAYTPFLFLFSKPIFDSYTPEEQAALRECAVVGRDEERKVIQDLNKKSL FT EKIKEAGLEVNTLSAEEQARIREKSMVVYEKHKAEIGAEVVDAILAKLEEIRK" FT gene 141517..142197 FT /locus_tag="SMa0254" FT CDS 141517..142197 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0254" FT /product="conserved hypothetical protein" FT /note="COG5482, Uncharacterized conserved protein" FT /db_xref="InterPro:IPR018679" FT /db_xref="UniProtKB/TrEMBL:Q930R0" FT /protein_id="AAK64793.1" FT /translation="METSLYLPVKGFLEKAGYVVKGEVDGCDLVGLSDDDPPVVVICEL FT KLRFNLELILQAVDRAAVADEVWIAARVSAKGKGREADKRYRDLCRRLGVGMLGISDAG FT DVSVIVGSVTPMPRTNPKRRSKLMREHRRRRGDPAIGGSTRAPVMTAYRQQALGCALAL FT TSGPLRVREIRSSVPDAGKILLANVYGWFERLDRGVYGLTAAGREALQRWPQQDMQAKT FT AVPA" FT gene 142327..143304 FT /locus_tag="SMa0255" FT CDS 142327..143304 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0255" FT /product="conserved hypothetical protein" FT /note="weak similarity to domain of DNA polymerase III, FT epsilon subunit" FT /db_xref="GOA:Q930Q9" FT /db_xref="InterPro:IPR013520" FT /db_xref="UniProtKB/TrEMBL:Q930Q9" FT /protein_id="AAK64794.1" FT /translation="MTSQLDMFARDVRPAAARAEASRARRQTSTSFSETEMLAALKATG FT RYRILRKLEARTVASEVRPGFPLRGVILDTETTGLDARKCEIIEIGLVSFTYNEEGEIG FT DVVAVYGGLQQPTIAIPPDITRLTGITDAMVAGQSIDIAAVQAIVGPADLIIAHNAGFD FT RPFCEAFSDVFVRKAWACSVSEIDWSGRGFEGTKLGYLIGQSGYFHDGHRAVDDCFALL FT GVLEQSSGGAALPPFAELYKASQRSRVRIFAENAPFDLKDVLKARGYRWSDGSDGRPKS FT WWIEVAEEELEAELGFLRKEIYRWDEADPPTQRLTAFDRYRARR" FT gene complement(143473..145566) FT /locus_tag="SMa0257" FT CDS complement(143473..145566) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0257" FT /product="oxidoreductase" FT /note="NADH:flavin oxidoreductase / NADH oxidase family, FT (has a small NADH binding domain within a larger FAD FT domain), some similarity to trimethylamine dehydrogenases FT and StcD stachydrine utilization protein (N-methyl proline FT demethylase, family membership" FT /db_xref="GOA:Q930Q8" FT /db_xref="HSSP:1O94" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q930Q8" FT /protein_id="AAK64795.1" FT /translation="MSRDSRFDILFEPVKIGPVTARNRFYQVPHCSGMGYRYPNAEAHL FT RGMKAEGGWAVVSTQEAEIHPTSDLTPANEARLWDDGDLPALSAVTERVHAHGSLAAIQ FT LVHNGLHVANRFSRMIPLAPSHAVSDSLDPVQARAMDKADITDMRRWYRNAALRAKKAG FT FDIVYLYAGHDMSVLQHFLSRRHNDRSDEYGGSFENRLRLFREILDDVREAIGDTCALA FT VRLAVDELMGPSGITCEGEGKDIISALGELPDLWDVNLSDWSNDSQTARFSEEGYQEPY FT IRFVKSVTTKPVVGVGRYTSPDSMVRVVKQGILDFIGAARPSIADPFLPKKIEEGRIDD FT IRECIGCNICTSGDNTNVPMRCTQNPTVGEEWRKGWHPETIARSEAPEPALIIGGGPAG FT LEAARALAQRGVDVMLAEGGGEWGGRVARECRLPGLATWGRVRDWRIGQLSTRVNAELY FT LHSPLSAADILQYGIPHVAIATGASWRTDGVGRTHRMALDFLSEGILVSPDAILSEGAE FT AVPSDGPVVVFDDDCFYMGSVLAELLARRGRTVTFVTPESQVSPWSRNTLEQARIQKRL FT IGLGVEIVTAMALAGRTKDQLELSCVYSGRSRPVDCATLVPVTARLPDETLWLELKARE FT AEWADAGIKTITRLGDCLAPGLIAAAVYSGHQYARTYQEQVDKDRVPFMREDIARLYGL FT RSG" FT gene complement(145822..146667) FT /locus_tag="SMa0259" FT CDS complement(145822..146667) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0259" FT /product="conserved hypothetical protein" FT /note="protein has a very weak, partial match to an FT esterase/lipase domain" FT /db_xref="InterPro:IPR002018" FT /db_xref="UniProtKB/TrEMBL:Q930Q7" FT /protein_id="AAK64796.1" FT /translation="MTAQDLYRIRDFVPDFDTIAAEFAERSWAVSARADVRADIRYGSG FT VREVIDLILPERVQAGAPLHVFVHGGYWRSGEKINYRFVAAPVLAAGGIAALVEYDLMP FT GKRLDVLVDQVRRSVLWLQAHAGDFGADPARLTVSGHSAGAHLASFLAATGPEEAYPPS FT LPTLQGLLLLSGIYDLSGIPDSFLRHEAEMTPMEAAAWSPLTSSQLPCPLRIIAYGADE FT TAPFQNQAAGLCELLRAQDKSAELLPVPDLNHMSIVLDLADTDGVLGRQLHDLVAQPTR FT " FT gene complement(146683..148146) FT /gene="gabD3" FT /locus_tag="SMa0260" FT CDS complement(146683..148146) FT /codon_start=1 FT /transl_table=11 FT /gene="gabD3" FT /locus_tag="SMa0260" FT /product="GabD3 succinate-semialdehyde dehdyrogenase" FT /EC_number="1.2.1.16" FT /note="Belongs to the aldehyde dehydrogenase family FT (pfam00171); This family of dehydrogenases act on aldehyde FT substrates; Members use NAD(P) as a cofactor, specificity FT unclear" FT /db_xref="GOA:Q930Q6" FT /db_xref="HSSP:1O9J" FT /db_xref="InterPro:IPR016162" FT /db_xref="UniProtKB/TrEMBL:Q930Q6" FT /protein_id="AAK64797.1" FT /translation="MTFHAKFSGYADPALHAAGLYIGGKWQSGSGITVLDPSTGNLLAE FT VADASIEDAQRAVDAADAAAAGWRATPARQRSEILRRWYQLMTQHAEELATLIALENGK FT ALADARGEVAYAAEFFRWYAEEATRIPGEFRHTPSGSHNILVDHEPIGIAVLITPWNFP FT AAMATRKIGPALAAGCTVILKPASETPLTAYAMARLGEEAGVPPGVVNVLTTSNPGGIT FT NAMLADPRVRKLSFTGSTGVGRVLLAEAAKSVVSCSMELGGNAPFIVFDDADLEVALDG FT AMIAKMRNAGEACTAANRFYVQAGIHDAFVAGLTARMKSLKLGPGYDPETQCGPMITQN FT AVRKIDRLVSEALAAGARATTGGKPLTENGYFYPPTVLENVPVNASIAREEIFGPVAPV FT YKFESDDEAIRLANNTEYGLAAYIYSRDLKRAMKVGKRIETGMLGINRGLMSDPAAPFG FT GVKQSGLGREGGVTGILEFMEPKYFAVDY" FT gene complement(148163..149362) FT /locus_tag="SMa0263" FT CDS complement(148163..149362) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0263" FT /product="alcohol dehydrogenase" FT /EC_number="1.1.1.-" FT /note="Belongs to the iron-containing alcohol dehydrogenase FT family (Class IV), Primarily NADH-dependent, although some FT NADPH- dependent activity was observed, Similarity to FT Agrobacterium tumefaciens AttL, family membership" FT /db_xref="GOA:Q930Q5" FT /db_xref="InterPro:IPR001670" FT /db_xref="UniProtKB/TrEMBL:Q930Q5" FT /protein_id="AAK64798.1" FT /translation="MNLFGTLRAPRELLFGAGQRHALGGIAAKLGHRALIVTDTRLAVD FT ADLLALVRRLEEAGLEVMVDSSTLPDVPVESAIVSAAAASGFAPDLVIGIGGGSCLDMA FT KCVTLLLTHGGRPQDYYGEYAVPGPVMPLIAIPTTAGTGSEVTPVAVLSDAERSLKVGI FT SSPHLIPAVSICDPELTLSCPPGLTAIAGADALTHAIEAFTAIRREPVPGIAQQRVFVG FT KNELSDHFALSAITLLWQGLERACKDGADAGARETVMLGATLAGLAFGVAGTAAAHAIQ FT YPVGALTHTAHGLGVACLMPYVMTWNAPLIRDELAQIAHAAGLGGPDEVIPALVSLFER FT IGIPATLRDLGLEEDRIDWVAEQSSGIARLIQNNPRPLNPHEMRNLVAAAHCGDRSRLN FT " FT gene complement(149384..150388) FT /locus_tag="SMa0265" FT CDS complement(149384..150388) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0265" FT /product="dehydrogenase" FT /note="SUBCELLULAR LOCATION: Cytoplasmic (Potential), FT SIMILARITY: Belongs to the LDH2/MDH2 oxidoreductase family, FT family membership" FT /db_xref="GOA:Q930Q4" FT /db_xref="InterPro:IPR003767" FT /db_xref="UniProtKB/TrEMBL:Q930Q4" FT /protein_id="AAK64799.1" FT /translation="MRLPPARLRNLSVALLEKRGVPADSARLQANLLLEAELRGLPSHG FT LQRLPLLLSRLDKGLANPTTRGNGTWRRASFLSVDGERGLGPVVMMDAMRVTRRILKET FT GLAIAAIRNANHMGMLAYYAEAAARDGLIGIVMSTSEALVHPFGGTQALIGTNPVAIGI FT PAAGHPFVLDLATSIVSMGKINNHAMRGLAIPPGWAVDRDGRATTDPHAAQAGAIAPFG FT DAKGYGLGLAIELLVAALAGSNLAPDVNGTLDDIHPANKGDLLILIDPSAGAGSIPALA FT AYLDRLRLSRPLDPTQPVAIPGDGARARRAAAAKTGIELPQPLFDHLTALEAA" FT gene 150483..151175 FT /locus_tag="SMa0267" FT CDS 150483..151175 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0267" FT /product="Transcriptional regulator, GntR family" FT /note="Family membership" FT /db_xref="GOA:Q930Q3" FT /db_xref="InterPro:IPR000485" FT /db_xref="UniProtKB/TrEMBL:Q930Q3" FT /protein_id="AAK64800.1" FT /translation="MVVAIAAERASRGAGIRPTSVVEGVYDSIYHRLMSLDIAPGARIP FT IDVLARELGVSQTPIREALSRLEREGLVRKEHLIGYSAAPQWTRKQFEDLYAFRLLIEP FT EAARLAAANMTPEALQQLENSAADMGHGEAPVDRNTRYSRFARADAQFHDEILKIAGND FT VIRSTLSNQHVHLHIFRLMFHIRVTQEALEEHESLLAAFRARDPQAAYDAMRVHIERSR FT DRLLSAFE" FT gene 151172..152764 FT /locus_tag="SMa0270" FT CDS 151172..152764 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0270" FT /product="ABC transporter, ATP-binding protein" FT /note="Has two domains similar to those of carbohydrate FT uptake proteins that transport only monosaccharides (MOS); FT The MOS family systems are involved in the uptake of FT monosaccharides (pentose and hexoses) like arabinose, D- FT allose, galactose, ribose and xylose; The typical FT organization of these systems includes Binding Protein FT (BP), Integral Membrane (IM) and ABC subunits; The ABC FT subunit is made up of two homologous halves, suggesting FT that a primordial gene duplication and subsequent fusion FT event occurred in the generation of the ancestral MOS FT system, family membership" FT /db_xref="GOA:Q930Q2" FT /db_xref="HSSP:1G9X" FT /db_xref="InterPro:IPR003439" FT /db_xref="UniProtKB/TrEMBL:Q930Q2" FT /protein_id="AAK64801.1" FT /translation="MNAALPSNAVAPPPNRAVAALAAEGLGKAYGPITVLSDVTLEVHA FT GEVHAIIGENGAGKSTLMKLLSGHVVPTAGHLLLEGKSVEFRNAVEAENAGIVLVHQEI FT LLASDLTVAENLYLGREVGRGLLVNDKAMNSRAAELLARVGSAARPRDRVGELPLAQRQ FT LVQIARALLDERKVIIFDEPTAVLANDEVAALLDIVRSLRDHGVAVLYISHRLDEVQAL FT ADRITVLRDGRMIGTWPAAGLGQREMAELMVGRELDMLYPHKRSATTAAPILSVTNLAI FT DHGSQTVSFSVSPGEVLGIGGMVGAGRTELIEGLMGLRPSEAESIVLNGREIGSRSVRT FT LMDAGLVYLTEDRKGKGLLLEEKLGPNLTLQALDTINPGVFLDKQGELSRLRKAVADYD FT IRVRSMRLEASQLSGGNQQKLLLAKVMMADPSVIIIDEPTRGIDIGNKSQIYDFIDGMV FT RAGKACIVISSEMPELVGLADRVLVMRAGRIVAELRGDEINEENVVYAATTGGCADVGE FT EKHDRSDSNTRTN" FT gene 152730..153725 FT /locus_tag="SMa0271" FT CDS 152730..153725 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0271" FT /product="ABC transporter, permease" FT /note="best similarity to branched amino acid, galactose, FT ribose transport systems, family membership" FT /db_xref="GOA:Q930Q1" FT /db_xref="InterPro:IPR001851" FT /db_xref="UniProtKB/TrEMBL:Q930Q1" FT /protein_id="AAK64802.1" FT /translation="MTVATATLAPTNEGARIRWADLAPFIALAVIVLFGALVNPNFVSS FT ANLINVITRSAFIAIIAVGATFVISSGGLDLSVGSMMAFVTGIMIMAMNHLAPAFGAWA FT IPMGAGVALLVGALCGLFNGLIVTVGRIEPFIVTLGTMGIFRAFITFMTDGGSLPIDRS FT LREAYRPVYFGSFFGIPYPVLITFVVVMAGAFLLYKTKYGRRLKSAGSNVEVARFSGVN FT VAGVRTGAYVIQGFCVAVAAICYVPRLGAATPTTGQLWELQVITAVVIGGTLLRGGRGR FT IGGTVAGALILEVIANVMVLSDLVSEYLVAAVQGAIIIIAMLAHRFTANR" FT gene 153755..154720 FT /locus_tag="SMa0273" FT CDS 153755..154720 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0273" FT /product="ABC transporter, periplasmic solute-binding FT protein" FT /note="Most similar to the RbsB, ABC-type sugar transport FT system, periplasmic component, family membership" FT /db_xref="InterPro:IPR005829" FT /db_xref="UniProtKB/TrEMBL:Q930Q0" FT /protein_id="AAK64803.1" FT /translation="MKSIIRKAGLLLSTATLVLAQPLGTAQAQEKRIVAVSIPAATHGW FT TGGVVYHAEQAEKEVEAAFPNVDVVLSTASSATAQVSALEDLSATRKLDALVILPFTSE FT ELTGPVEQIKKNGTFISVVDRGLTDPTIQDLYVAGDNIAVGANTARWLSDKLGGQGEIV FT VLRGIPTVIDDERIKGFSDVIDKTNIKILDIQYANWNQDEAFKLMQDYLAKYPKIDAVW FT ANDDDMLLGVIEAVDRAGRKDIKYALGGNGMKQVIEMVKEGNERTPVSTPYPPSMIKSA FT IYMTAAQFAGQAPMRGSFLLGAPLITPENADQFYFPDSPF" FT gene 154841..155428 FT /locus_tag="SMa0275" FT CDS 154841..155428 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0275" FT /product="conserved hypothetical protein" FT /note="Contains a domain similar to cd03169, FT GATase1_PfpI_1, Type 1 glutamine amidotransferase FT (GATase1)-like domain found in a subgroup of proteins FT similar to PfpI from Pyrococcus furiosus; PfpI is an ATP- FT independent intracellular proteases which may hydrolyze FT small peptides to provide a nutritional source; Only Cys of FT the catalytic triad typical of GATase1 domains is conserved FT in this group; This Cys residue is found in the sharp turn FT between a beta strand and an alpha helix termed the FT nucleophile elbow" FT /db_xref="GOA:Q930P9" FT /db_xref="HSSP:1G2I" FT /db_xref="InterPro:IPR002818" FT /db_xref="UniProtKB/TrEMBL:Q930P9" FT /protein_id="AAK64804.1" FT /translation="MSGKKILMLTGEFTEEYEIYVFQKGMEAVGHTVHVVCPDKKAGDR FT IKTSLHDFEGDQTYTEKLGHYADINKTFSEVRPEEYDAVYAAGGRGPEYIRTDKRVQDM FT VRHFHDTGKPIFTICHGVQILMAVPGVLKGRKVAGLGACEPEVTAVGGTYIDVEPTGAY FT VDGNMVSAKGWTGLAAFMRECLNVLGTKITHT" FT gene complement(155598..155948) FT /locus_tag="SMa0277" FT CDS complement(155598..155948) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0277" FT /product="conserved hypothetical protein" FT /note="COG4898, Uncharacterized protein conserved in FT bacteria" FT /db_xref="InterPro:IPR014580" FT /db_xref="UniProtKB/TrEMBL:Q930P8" FT /protein_id="AAK64805.1" FT /translation="MEKHRIYSVSVASVYPHYVAKAEKKGRTKAEVDEIICWLTGYGPQ FT ALDDQLAKNTSLENFFAQAPRMNPSRSLITGVICGVRVEEIQDTTMREIRYLDKLIDEL FT AKGKAMDKILRK" FT gene complement(156190..156489) FT /locus_tag="SMa5016" FT CDS complement(156190..156489) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa5016" FT /product="hypothetical protein" FT /note="Has similarity to a short region in the carboxy- FT termini of proteins annotated as aldehyde dehydrogenases; FT Possible ORF fragment" FT /db_xref="UniProtKB/TrEMBL:B3KLW4" FT /protein_id="ACF07962.1" FT /translation="MVGFNGAKMSGYGAKGGLAHLATYLYTKSATFNARSHDFRSSGPG FT GTQDFRSGYDDLHRPLASLARPGGIPSGTGVVGRARPDSRSIRLDRIIDLDDMQ" FT gene complement(156800..157411) FT /locus_tag="SMa0279" FT CDS complement(156800..157411) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0279" FT /product="conserved hypothetical protein" FT /note="weak, partial similarity to the ubiE/COQ5 family of FT methyltransferases" FT /db_xref="GOA:Q930P6" FT /db_xref="InterPro:IPR013216" FT /db_xref="UniProtKB/TrEMBL:Q930P6" FT /protein_id="AAK64807.1" FT /translation="MGIYRDVILPRLCDLSMRNERLRPYRERVIGAAQGRVLEIGVGSG FT LNLPFYGPVVGEVLALEPSAGLVAMAREAPRSDLPVSFIDASAEAIPLDDKSVDTVVTT FT WTLCTIPDAAAALTEMRRVLRPGGKLLFVEHGLAPDRGVRWWQDTLTPVWRRISGGCHL FT NRPIRSMIECGGFRMERVETGYMQGPKPMTFMYEGSARPE" FT gene complement(157557..158345) FT /locus_tag="SMa0280" FT CDS complement(157557..158345) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0280" FT /product="conserved hypothetical protein" FT /note="very weak, partial similarity to domain of MauE, FT methylamine utilization protein, weak similarity to FT glutaredoxin domain" FT /db_xref="GOA:Q930P5" FT /db_xref="HSSP:1NM3" FT /db_xref="InterPro:IPR012335" FT /db_xref="UniProtKB/TrEMBL:Q930P5" FT /protein_id="AAK64808.1" FT /translation="MLDRTIPHNLARKAVLYRMVMPGHTCPYGLKTKDLLQRSGYEVDD FT HHLTTREETDAFKAQHGVPTTPQVFIDGQRVGGYDDLRRFLGKPVADPKATTYRPVIVL FT FTLTALTAMAASHAVNGTPFTLRAAEWFIAFSMVVLAMMKLQNVESFATMFLNYDLLAM FT RWIPYSYIYPYAEGLAGVLMVAGALNWLSVPVAMFIGTVGAVSVFKAVYIDKRELKCAC FT VGGSSNVPLGFISLTENLMMIAMAVWMAAGSIGLIATHAM" FT gene 158400..158804 FT /locus_tag="SMa0281" FT CDS 158400..158804 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0281" FT /product="Transcriptional regulator, MerR/CueR family" FT /note="The CueR-like proteins have been shown to activate FT metal ion efflux and resistance regulons in many FT eubacterial species; Besides transcriptional regulator of FT the copper efflux operon, CueR from Escherichia coli, the FT family includes Pseudomonas aeruginosa CadR, E; coli MerR, FT Ralstonia metallidurans PbrR, Rhizobium leguminosarum ActP FT and E; coli ZntR that regulate expression of the cadmium, FT mercury, lead, copper and zinc resistance operons, FT respectively; These proteins are comprised of two distinct FT domains that harbor the regulatory (effector-binding) site FT and the active (DNA-binding) site; Their conserved N- FT terminal domains contain predicted HTH (helix-turn-helix) FT motives that mediate DNA binding, while the dissimilar C- FT terminal domains bind specific metal ions; These proteins FT share the N-terminal DNA binding domain with other FT transcription regulators of the MERR superfamily that FT promote transcription by reconfiguring the spacer between FT the -35 and -10 promoter elements, family membership" FT /db_xref="GOA:Q930P4" FT /db_xref="HSSP:1Q06" FT /db_xref="InterPro:IPR015358" FT /db_xref="UniProtKB/TrEMBL:Q930P4" FT /protein_id="AAK64809.1" FT /translation="MVQSQDLQELTIGKLAAAGGVGVETIRFYQRKGLLATPKRLEGVR FT RYGGEDVRRLRFIKQAQAAGFTLEEIGQLLALDAGHNRSAARELAKKKLEQLDARIGEL FT NRAREALRKLVSECAEDKTGPCPILASFGV" FT gene complement(159165..159389) FT /locus_tag="SMa0285" FT CDS complement(159165..159389) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0285" FT /product="conserved hypothetical protein" FT /note="Miscellaneous; Hypothetical/Global homology" FT /db_xref="UniProtKB/TrEMBL:Q930P3" FT /protein_id="AAK64810.2" FT /translation="MSASAQLAKMAIEKGHGETSHIVWMKMGGLKDWELKPNILEGDWT FT FVTKNSVDFQGPNTSPAPRDNIPKRCSSR" FT gene complement(159590..160051) FT /locus_tag="SMa0286" FT CDS complement(159590..160051) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0286" FT /product="hypothetical protein" FT /note="Has short stretch of similarity in carboxy terminus FT to Y4eO of Rhizobium sp; NGR234" FT /db_xref="InterPro:IPR007367" FT /db_xref="UniProtKB/TrEMBL:Q930P2" FT /protein_id="AAK64811.1" FT /translation="MSLFCGSGGRRRAVIHLFSRDLAQGKVPAGHTSCQTPSFRSTMAA FT TSWRGPVHSSPSILRARAASRPRSDCLPSAPQGPTGNSAHTPLGGPVARGLDGSHEFLA FT IDLVPVMRDASERLDLAAAREIVTASPDVLGGTPVIRGTPVPVYDVAAS" FT gene complement(160062..160508) FT /locus_tag="SMa0287" FT CDS complement(160062..160508) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0287" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR013417" FT /db_xref="UniProtKB/TrEMBL:Q930P1" FT /protein_id="AAK64812.1" FT /translation="MNKGSTKAKRQENSRCENEEPTRKPGTSIAEWIVAGVSCLALLAV FT LGYLILDGLSGRNGAADIIVLPAEVTAMNDGYVVEFAANNRAGKSVAAVEIKGELRGGE FT EVVEESGVTIDYIPQKSERKGALIFRSDPEGYELRIFASGYSEP" FT gene complement(160505..161341) FT /locus_tag="SMa0288" FT CDS complement(160505..161341) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0288" FT /product="conserved hypothetical protein" FT /note="predicted membrane protein" FT /db_xref="InterPro:IPR013416" FT /db_xref="UniProtKB/TrEMBL:Q930P0" FT /protein_id="AAK64813.1" FT /translation="MTPAEGVVGPTPREFWIGLGRAFAGALIFAVPVLMTMEAWALGFH FT LHPLRLALLLVATVPTLVLLHKYGGFRKSVGLRDRIADAFVALLVAAIAASAILFSFGI FT VDADMPLREIVGKVAVQIVPGSLGASLARAQLGPSPLEGDAVPEPAYAGELFLMVVGAL FT FLSVNIAPTEEVVLIAYKMNPWHEIALALGTLGLMHVFVYELEFRGTHNPEPGAGFVNI FT FFRYTIVGYCLVMLVNFYILWTFGRTDGVGFSETLSAVVVLSFPGALGAAVARLIL" FT gene 161616..161984 FT /locus_tag="SMa0291" FT CDS 161616..161984 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0291" FT /product="conserved hypothetical protein" FT /note="similarity in central region of protein to Atu5467 FT of Agrobacterium tumefaciens" FT /db_xref="UniProtKB/TrEMBL:Q930N9" FT /protein_id="AAK64814.1" FT /translation="MVLFCSDPHISPETNPENAVSEFISYLFAILVVGPLQAEISERLR FT GVPSTEIVQAGRACVAAEAPRLLQRAQEDWGWAAANAVGVSVGLIDPASLLAGQNADCD FT RLVQVLSQSSGGNGDDEA" FT gene complement(162273..162668) FT /locus_tag="SMa0293" FT CDS complement(162273..162668) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0293" FT /product="conserved hypothetical protein" FT /note="weak, partial similarity to receiver domain" FT /db_xref="GOA:Q930N7" FT /db_xref="InterPro:IPR001789" FT /db_xref="UniProtKB/TrEMBL:Q930N7" FT /protein_id="AAK64816.2" FT /translation="MESVTILLAEDETLLLLDFEDALKEAGFMVLAVTSGKKAVEHLKA FT AESSIAGIVTDIRFAESPSGWDVTRIAREIDPEMPVVYISGDSAPDWASQGVPKSIMIE FT KPFVMSQMIVAISQLLNDRRAGAAALE" FT gene complement(163041..164855) FT /locus_tag="SMa0298" FT CDS complement(163041..164855) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0298" FT /product="ABC transporter, ATP-binding protein" FT /note="Belongs to the family of ABC_NikE_OppD_transporters, FT The ABC transporter subfamily specific for the transport of FT dipeptides, oligopeptides (OppD) and nickel (NikE); FT Oligopeptides constitute an important sources of nutrients FT and several systems are also involved in cell-to-cell FT communication; Members of this family are found in all FT prokaryotes and are characterized by two ABC subunits, FT encoded by different genes; Nickel is an essential cofactor FT for a number of enzymatic reactions; The Nik system of E; FT coli provides Ni2+ ions for the anaerobic biosynthesis of FT hydrogenases and is similar not only in subunit composition FT but also in the primary amino acid sequence of the FT components, to the oligopeptide ABC transporters, family FT membership" FT /db_xref="GOA:Q930N6" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q930N6" FT /protein_id="AAK64817.1" FT /translation="MKNLIEVRNLNIAYGGPSGWTNVVQDVSFEIAPGEAFGLVGESGC FT GKSTVAYRLLGYGTINSLVQTGEVLFDGTDLLKLDAASLMRLRGNRIAFVPQNPTTSLS FT PGMRVGSQICEMIATHKALPDGMTMERRIVELFTLVGLPDVGHRYPHELSGGQQQRVTI FT AMAVACNPDLLVLDEPTTGLDVTTQRQIIQLLADLRSRIGMAMLYVTHDLALLAQIADR FT VGVMYAGQLVEVAPCDKLLSAPAHPYSRGLIASIPTNDGTDRQARSLRGMLRRDEMSTG FT CKFEPRCDFATGACRATPQLLELIEDARSVACMRWREATAPLAPSVTAKAVARTAVRSE FT SLLSVTELSLSYQQPGLFNRLLGRTSPAVVREINLNLAAGEVVALVGGSGSGKSTIARA FT ISARLPPRAGIIRLDGTALAPSLKDRSVEELRQIQYIFQNPDASLNPRGLRLFERTQEL FT DDPCLYRNVERREDLVADQKLRIDEKCAGCYSKPPLDSKRTITSHARPPFRGRRPYRAS FT AVPSPAAVRARSAIHAPKTGHPSRSRLPASSAAISLPKHWYATPPRQITTARRSRSDQC FT RDLARDRAQASRRSALRRSAADRTANSC" FT gene complement(164858..165745) FT /locus_tag="SMa0299" FT CDS complement(164858..165745) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0299" FT /product="ABC transporter, permease" FT /note="Most similar to DppC, ABC-type FT dipeptide/oligopeptide/nickel transport systems, permease FT components, family membership" FT /db_xref="GOA:Q930N5" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:Q930N5" FT /protein_id="AAK64818.1" FT /translation="MSVITTIPARRFSRFNAERWRATPGPFKVGAVILVAHALFAILGV FT FWTPYGFAEMGAGLPLSGASWQHPMGLDQIGRDVFSRFMHGAHIVLMLSFAGTMLGMVA FT GTTLGLLSGYIGGWFDEVTQRIVEAMISIPFLALALVMIIAAGPALAGKPVLIVFVVGL FT VYAPRIVRIARAAAMDIATREYVAVAELRGEGTWSIVFREILPNAANVLLVEFSLRLSY FT APILIGALGFLGFGIRPPTPEWGLMISENRNLLIASPVTVFGPGLGLASLVIGFNLFTD FT GLSRMLGQRPVAGA" FT gene complement(165742..166695) FT /locus_tag="SMa0300" FT CDS complement(165742..166695) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0300" FT /product="ABC transporter, permease" FT /note="Most similar to DppB, ABC-type FT dipeptide/oligopeptide/nickel transport systems, permease FT components, hypothetical protein" FT /db_xref="GOA:Q930N4" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:Q930N4" FT /protein_id="AAK64819.1" FT /translation="MSVLRLLASRILFSVLTLLLVSVLIFLILEALPGDVATRILGRDA FT TAKALELLRSQLDLDQPALVRYFQWLGDFLRGDLGVSIATGRPITDVLGPRIVNTLLLS FT LFAFAIYLVLALVPAIIQATNRGKAVDNIISVITLVLLSLPDFLLATILLFLFAVAVPI FT LPALATISEASTWQETLRAMVLPAVTLAIMMAVYAIRVLRDSLIEVLRSDYVRLAELKG FT LRPTAVLFRHALPNAIVPALNVTALNFGFLIGGVVIVERVFSYPGFGTLLIDALQLRDI FT PLIKATVMISAVVYVAANLVADVLAVLLQPRLRTSR" FT gene complement(166692..167360) FT /locus_tag="SMa0301" FT CDS complement(166692..167360) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0301" FT /product="hypothetical protein" FT /note="local similarity to other hypothetical proteins" FT /db_xref="UniProtKB/TrEMBL:Q930N3" FT /protein_id="AAK64820.1" FT /translation="MTVFALTTFLNSFADALDRDARTVSRSHAARLRRLADQLPPMNDV FT PQGRVPIQAACEAELAAHDQSAIARALATLLPFVHITRSKSYLANPPSSDFGENYGYGV FT ICGPSSGPPALIKDPDIALGLMFLGPKTHYPLHHHPADELYYTVTGPSFWRAGEADWTR FT RGIDEIIHHPPWLPHATLSAEGPLVLLYIWEGDLETDAAFIPDTVTADAALSSMGLDAT FT " FT gene complement(167430..168956) FT /locus_tag="SMa0302" FT CDS complement(167430..168956) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0302" FT /product="ABC transporter, periplasmic solute-binding FT protein" FT /note="Similar to pfam00496, SBP_bac_5, Bacterial FT extracellular solute-binding proteins, family 5 and DdpA, FT ABC-type dipeptide transport system, periplasmic component, FT family membership" FT /db_xref="GOA:Q930N2" FT /db_xref="HSSP:1B52" FT /db_xref="InterPro:IPR000914" FT /db_xref="UniProtKB/TrEMBL:Q930N2" FT /protein_id="AAK64821.1" FT /translation="MKRHLLKGTALAVTMAACSFGATVAFAQEGCVRVLGYESDGEKQT FT MDPAALIGTDSVYHIRAVYEPLVDRSNTMQPVPALAESWESNADATEWTFHLRKGVKFH FT DGSDFDAKDVVYSYRRLLDPAVSPGGFSTLAFLDADGITAIDDHTVRFKVKEPVVELPM FT LIATKYALMVPEGAKSEDLRVKGNGTGPFMQETFTINGAVRVMRRNPTYWRAGLPKSEC FT LEITTSLEPTSRLSALLSGTVDLSLTVDPASLITLKDNPAVELAATPGATSLYIAVWTD FT TPPFDSVKVREAMKLVMDRQKILDTVLLGYGEVGADTPIPPSSPFGLGTPAKTADIEKA FT TALLAEAGHPDGIDFDLYTSDSYPGMMLLAQVYAQMAAPAGIRVNVITSPAEGYWDTIW FT LKKPAVISYTSARPPAEALTLSLNSKSEWNETHWTRDDFDALVVKAGQTADEKQRNDLY FT RDAQRIVADEGGMILPVFSSVVAGLRKGCSGYEPNVDVNRIDYAELTCAD" FT gene 169064..169942 FT /locus_tag="SMa0303" FT CDS 169064..169942 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0303" FT /product="Transcriptional regulator, LysR family" FT /note="Contains a LysR-type HTH and substrate binding FT domain, family membership" FT /db_xref="GOA:Q930N1" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q930N1" FT /protein_id="AAK64822.1" FT /translation="MVRRNLPPLTTLRAFEAAARLMSFKAAAEELRVTQSAVSHQVASL FT ERNLGTPLFVRLPGRVELSQEGTVYFPVVQDALDKIALTTDLIRKTNTSASLTVQVYVT FT VAVRWLIPRLQAFKEASPEIAVNLDASLLDWEFNPDRADVGFIYTRAPNRPNLTYTLLR FT RERLVGVCSPAIARAIKTAEDLRHFSFLSVSGTTDDAETWAASVGVAGLSQKSSPLFDS FT NLLAIEAAANGQGVVVVPQFLVEGDIANGNLVAPLASDVMQPGGWYLVHLQRRGNEKAI FT RKFLQWIQSQT" FT gene complement(170035..171675) FT /locus_tag="SMa0306" FT CDS complement(170035..171675) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0306" FT /product="histidine ammonia-lyase" FT /EC_number="4.3.1.3" FT /note="Belongs to the phenylalanine ammonia-lyase (PAL) and FT histidine ammonia-lyase (HAL) family; PAL and HAL are FT members of the Lyase class I_like superfamily of enzymes FT that, catalyze similar beta-elimination reactions and are FT active as homotetramers; The four active sites of the FT homotetrameric enzyme are each formed by residues from FT three different subunits; PAL, present in plants and fungi, FT catalyzes the conversion of L-phenylalanine to E- cinnamic FT acid; HAL, found in several bacteria and animals, catalyzes FT the conversion of L-histidine to E-urocanic acid ; Both PAL FT and HAL contain the cofactor 3, 5-dihydro-5- FT methylidene-4H-imidazol-4-one (MIO) which is formed by FT autocatalytic excision/cyclization of the internal FT tripeptide, Ala-Ser-Gly, specificity unclear" FT /db_xref="GOA:Q930N0" FT /db_xref="HSSP:1GKM" FT /db_xref="InterPro:IPR001106" FT /db_xref="UniProtKB/TrEMBL:Q930N0" FT /protein_id="AAK64823.1" FT /translation="MRIDSLFHSVVGACLLFSSPVMADVLLNGRNATPEMIVRVAKGEA FT VTVDGESLDKVERAYAVLLQGAKEGQEIYGLTVGVGWNKDRKMVDATGELTPELMEASR FT EFNEGLLRAHSVGVGPDAAVPVVRAAMAVRLNNILTGGPGVQPHVAEMLLAFLNKGITP FT TMPSRGSVGQADMTLLSHIGLAMLGEGDVDYQGRRMSAAEALKAAGIEPLKPFGKDGLA FT ILSSNAYAAGLAALAIHDAEQLLSTSRLVYALSLEGLNGNVSPLLEDVAALRPFPSHLS FT STTELRALLEGSYLWQADDKRILQDPLSFRTAPYLLGSFADSLARTKALVQIQINSSDD FT NPGIVVGVEPKSDLFQARRGYVEGGAVLPTANFEPLPWIIAFEELGIVLAHHTTASSER FT VLKLNNPTHTKLARYLGTENTHHAFLVVEAPLMALATENRALAQPTSFDSRPIAGGVED FT VGTNAPLVVERIRAQIDNSFTILSMEMLHAAQAADLRLKGHPERKLSTATTSFHDAFRQ FT RVPFLDRDRSMTPDIAAGTAFLKEYALTN" FT gene complement(172016..173002) FT /locus_tag="SMa0307" FT CDS complement(172016..173002) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0307" FT /product="Transcriptional regulator, LysR family" FT /note="Contains LysR-type HTH and substrate binding FT domains, family membership" FT /db_xref="GOA:Q930M9" FT /db_xref="InterPro:IPR005119" FT /db_xref="UniProtKB/TrEMBL:Q930M9" FT /protein_id="AAK64824.1" FT /translation="MSRSAIKSISIMQVIDHFNLRSFDLNLLVAFDAMMEEMSVTRAAQ FT RLKIQQPAMSHNISTLRTLFQDELFIRVGQVMKPTARALNLSGPVRQALRQAQAAVLMA FT DVFDPATEQRTFRLGLSSEVELLLLPDLTARLRDIAPGIRILARGGDAAEVDAMLDAGV FT IDLSVGCSYLPDSRHHCEPLYQSSVLCCFNPQLLEISNPVSLDAYMAAQHAVISQTDSL FT HGCVKDALEHAGAELEVVAAAPDFMSILATARSSAVIATVSSRIAARYGPLLGLQVSPV FT PLALSFPPVAMVWPLHMDSDLGCAWLRQQIREAMLRTTETNVADIAA" FT gene 173063..174022 FT /locus_tag="SMa0308" FT CDS 173063..174022 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0308" FT /product="conserved hypothetical protein" FT /note="Beta-lactamase-like, Metallo-beta-lactamase FT superfamily" FT /db_xref="GOA:Q930M8" FT /db_xref="InterPro:IPR001279" FT /db_xref="UniProtKB/TrEMBL:Q930M8" FT /protein_id="AAK64825.1" FT /translation="MPSRRSILKSALTGLIVAPFVAPSVTFAKAPFAVVQAPGYYRLKI FT GSVEVTALSDGTVALPLAKLYTNTSEHDAQNALKDAFLPDMVPTSVNAFLVNTGERLVL FT IDAGTGGYLGASLGKLVSNIEASGYKVGDIDDVILTHIHTDHSGGLMSNGKRTFPNATL FT RVNEREAKFWLSSANAMTATGTVKQHFGEADQCVTPYVKAGKFETFADNAAPVPGLGSI FT LYAGHTPGHSAITLESESQKIVFWGDITHGDILQFDEPGVAIEFDIDQKAAVAARNTAF FT KQAVEGKYLVAGAHIAFPGIGHVREDSKNYDWLPINYA" FT gene complement(174273..175004) FT /locus_tag="SMa0310" FT CDS complement(174273..175004) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0310" FT /product="hypothetical protein" FT /note="Contains a LysR-type substrate binding domain, but FT is lacking a helix-turn-helix DNA binding domain" FT /db_xref="InterPro:IPR005119" FT /db_xref="UniProtKB/TrEMBL:Q930M7" FT /protein_id="AAK64826.1" FT /translation="MRLTEAGNRLHETLSQPMAEVRSAFENVAGDARPSGLLRIAVTSI FT AEQFLSGPLIASFAETHPGITIDVTVTDDVFDIVAAGFDAGVRLGEVIEQDMVAVPLTK FT EEREVVVATPRYFELHGTPRHPRELVRHRCVGWRPSPSAAPYRWEFEEDGIPFDVAVEP FT QITTNDLHLMIRTALAGGGITFALEETFRPYIVRGELITALDDYLPPFPGFFLYFPNRR FT NMAPKLRALIDHVRAYRPTPS" FT gene 175343..175876 FT /locus_tag="SMa0312" FT CDS 175343..175876 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0312" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q930M6" FT /protein_id="AAK64827.1" FT /translation="MAFGICAAPVAAQDSSCPREGADAPLALHADWIMKGWERHEGDGK FT FEFSQKLNRYYDLENTKGVFYDNFAPGSTQLFDNSARYGANWEALQNAARSVRHGLTGG FT HDVIVSDTVASTTLGFVGRIDRLDGAVVAFDGRSQLGWTCTGGEWKIRHELNYAWVVEP FT ETIQSFLGKTEPAQ" FT gene 175873..176124 FT /locus_tag="SMa0314" FT CDS 175873..176124 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0314" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q930M5" FT /protein_id="AAK64828.1" FT /translation="MTSQTLSHPYVGMWETTDGRIRHQLLPNGRYDEARGSRESAYRGR FT YEVSGNHIEYWDDTGFTADGDFVDDVLHHAGMVLYRKQ" FT gene 176207..177469 FT /locus_tag="SMa0316" FT CDS 176207..177469 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0316" FT /product="conserved hypothetical protein" FT /note="has 2 complete domains and 1 partial domain similar FT to those found in carboxymuconolactone decarboxylase family FT proteins" FT /db_xref="InterPro:IPR003779" FT /db_xref="UniProtKB/TrEMBL:Q930M4" FT /protein_id="AAK64829.1" FT /translation="MTMTHIEQQLENLASPGDRQKHLRGLAVLKQIGGENFGGPVSQLA FT SFSEDLARFTIQYPYGDVLSRDGLDLRTRQILTAATLLAHGSAQSQLSFHLYGLLNAGG FT TRADVVDLLFISAGLLGFPTAINAVPIVRDILADRDETKNVAGAQTSPAVPDMPSDRFA FT VLDRIAPDFVNWREHTLGEEIFGAVHLEPRLAHLASAAMLAARGKVGASFDAHIVSALA FT AGATDSDIVEMVIQLSVYSGFPAALNAAGRARNVLAAPERPQASTQKGVDTTKDDEKRF FT MRGVATLAETSGGSGADVVDSFKDVAPGLGRLIVAHCYGDIFCRPALDPKVRELGAISA FT LAAQGTVAAEKPLGVHIDAALNLGATPEEIVETLFNIIPYAGYPLIEKALLIAHDRISL FT FDEKQVDGSPSDHRTLDMCSG" FT gene 177973..178974 FT /locus_tag="SMa0319" FT CDS 177973..178974 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0319" FT /product="Transcriptional regulator, AraC family" FT /note="Contains an AraC-type DNA-binding HTH domain, but is FT lacking the amidase domain, family membership" FT /db_xref="GOA:Q930M3" FT /db_xref="InterPro:IPR018062" FT /db_xref="UniProtKB/TrEMBL:Q930M3" FT /protein_id="AAK64830.1" FT /translation="MANIEASRQNVSPPIPAVAGNPIYPAVLVPELNEVIARPDRTSPL FT GLEQYIAGRTLVSGDTPAWSDMFVQVYSRLNKQEPFLVPAVAEPLIVWVMSGEAVVEER FT DLDGDWVANTVTVGDFFLTRSPTPYEMRWRSVDAAPFQVMHLYLSVPLFERVAYDVLGC FT AAPPALRDISGGRDTQLSHLLALVHQELTAEGKGSQLFIQGLAQSLAVHLIRNYAANEA FT DDRQNALTGFKLRRAVAHLEEHLAEPFNLAQLAETVGMSEFHFSRLFKKATGLSPSRYF FT IRQRVARAQLLLQETDTSIIEIGMSVGYSSPSHFAQVFRRETGLPPSHYRRG" FT gene 179119..179868 FT /locus_tag="SMa0320" FT CDS 179119..179868 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0320" FT /product="short chain alcohol dehydrogenase-related FT dehydrogenase" FT /note="Belongs to the short-chain dehydrogenases/reductases FT (SDR) family, specificity unclear" FT /db_xref="GOA:Q930M2" FT /db_xref="HSSP:1K2W" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q930M2" FT /protein_id="AAK64831.1" FT /translation="MTSLNGKIALVTGASSGIGAATAAKLAEAGAKVGIAARRTDKLED FT LKKKIEAKGGEALVIEMDVVDTTSVEAGVKKLVDAYGSIDILVNNAGLMPLSDIDQFKV FT DEWQRMVDVNVKGLLNTTAAVLPQMIKQHSGHVFNMSSIAGRKVFKGLSVYCATKHAVT FT AFSDGLRMEVGQKHGIRVTCIQPGAVATELYDHITDPGYRQQMDELATQMTFLQGEDIG FT DTIVFAAQAPAHVDVAELFVLPVEQGW" FT gene 179926..180474 FT /locus_tag="SMa0322" FT CDS 179926..180474 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0322" FT /product="conserved hypothetical protein" FT /note="Has weak similarity to a flavin reductase like FT domain; This is a flavin reductase family consisting of FT enzymes known to be flavin reductases as well as various FT oxidoreductase an" FT /db_xref="GOA:Q930M1" FT /db_xref="InterPro:IPR012349" FT /db_xref="UniProtKB/TrEMBL:Q930M1" FT /protein_id="AAK64832.1" FT /translation="MKELPASQAYRVLEPGPIVMVSTSDNGKPNVMTMGFHTMIQHDPP FT LIGCVIGPWDHSYQALRKTGECVIAVPGLDLAETVVDVGNCSGDRVDKLQRYGLMTQPA FT RDVSAPLLRDCLANIECRVVDTRLLDPYNLFILEATRIWINENRKERRMMHHRGDGTFT FT VDGGTLDLKDRMVRWRHLP" FT gene 180525..180809 FT /locus_tag="SMa0323" FT CDS 180525..180809 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0323" FT /product="conserved hypothetical protein" FT /note="pfam07045, DUF1330, Protein of unknown function FT (DUF1330); This family consists of several hypothetical FT bacterial proteins of around 90 residues in length; The FT function of this family is unknown" FT /db_xref="InterPro:IPR010753" FT /db_xref="UniProtKB/TrEMBL:Q930M0" FT /protein_id="AAK64833.1" FT /translation="MSAYLIVDLDIHDMKSIEDYRSKALPLVAKAGGKLIAIDESPLEL FT EGWIATNMLIIEFPDKDAIRQLFASPEYAPLAAQRQAAAASRIIAINGV" FT gene 180910..181212 FT /locus_tag="SMa0325" FT CDS 180910..181212 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0325" FT /product="conserved hypothetical protein" FT /note="Function unknown but has weak similarity to a domain FT found in monooxygenases involved in the biosynthesis of FT several antibiotics by Streptomyces species" FT /db_xref="GOA:Q930L9" FT /db_xref="InterPro:IPR007138" FT /db_xref="UniProtKB/TrEMBL:Q930L9" FT /protein_id="AAK64834.1" FT /translation="MADLTNVAYFTAKPGRSGELGDELLQLVTPSRNEEGCLRYEIHQS FT NDVPDVWMVLEDWRHASDFKLHMNTPYVQAFMAKVPDLCVEDVEICGYQQRSPQV" FT gene 181233..182072 FT /locus_tag="SMa0326" FT CDS 181233..182072 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0326" FT /product="short chain alcohol dehydrogenase-related FT dehydrogenase" FT /note="Belongs to the short-chain dehydrogenases/reductases FT (SDR) family, specificity unclear" FT /db_xref="GOA:Q930L8" FT /db_xref="HSSP:1FDU" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q930L8" FT /protein_id="AAK64835.1" FT /translation="MSTQNPKVWLVTGCSTGFGRYIAEHLLEVGEKVVVTARKADKIAD FT LEQKGDALILPLDVIDRDQCQKVVDAAEAHFGRIDVLINNAGIGFFGAIEETDESNARR FT LFDVNFFGTANTIHSVLPHMRARRSGTIVNLTSIGGLVGYTGVGYYCATKFAVEGLSDT FT LRNEVAPLGINVMTVEPSAFRTEWAGSSNEVSASIEDYEATAGEARRAYHTSVGKQAGD FT PARAAKAIREAVLAQQPPHHLPLGNDAADAALKKAEDLKANVLAWEALSRSADFPAN" FT gene 182145..182906 FT /locus_tag="SMa0329" FT CDS 182145..182906 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0329" FT /product="short chain alcohol dehydrogenase-related FT dehydrogenase" FT /note="Belongs to the short-chain dehydrogenases/reductases FT (SDR) family, specificity unclear" FT /db_xref="GOA:Q930L7" FT /db_xref="HSSP:1G0N" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q930L7" FT /protein_id="AAK64836.1" FT /translation="MSKRFDGKVAIVTGGGSGIGAAIANRLLEEGASVMMSGRTEKRLS FT DVASKMPADRSGIFVANVSSRPDCDALVAATVERFGRIDTVVNAAGMNFVGTIQETSDQ FT DWDECIASDLSGVFYMSRAAVPHLKETKGSIVNIGSVSSLGGGWSHAAYNAAKGGVANL FT TRSAACDLGKFGVRANTVAPGLTVTGMVEAIMDDDALLEKAWDRIPLRRAGQPASAVAF FT LASDEAAWITGIVLPVDGGQTCTDGGPEWGK" FT gene complement(182962..183186) FT /locus_tag="SMa5017" FT CDS complement(182962..183186) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa5017" FT /product="hypothetical protein" FT /note="Predicted membrane protein; Has similarity to the FT carboxy-terminal half of DoxX family proteins; Together FT with the adjacent gene, SMa0333, may comprise a pseudogene" FT /db_xref="InterPro:IPR011637" FT /db_xref="UniProtKB/TrEMBL:B3KLW5" FT /protein_id="ACF07963.1" FT /translation="MTEIVGSIALILGFQTRIVALILALFSVATALTFHNNLSDLNQFI FT HFFKNIAMAGGLLQVVAFGAGRYSLDARR" FT gene complement(183183..183395) FT /locus_tag="SMa0333" FT CDS complement(183183..183395) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0333" FT /product="conserved hypothetical protein" FT /note="similar to S; meliloti SMb20597 and has local FT similarity to a group of DoxX proteins; Together with FT adjacent ORF, SMa5017, may comprise a pseudogene" FT /db_xref="InterPro:IPR011637" FT /db_xref="UniProtKB/TrEMBL:Q930L6" FT /protein_id="AAK64837.1" FT /translation="MSYSDTIAQRVETLSHSALINGVAPLAGRVLLAAIFLLSGISKIS FT DPAGTIGYINMVGLPFPPLSYGAPY" FT gene complement(183576..184352) FT /locus_tag="SMa0335" FT CDS complement(183576..184352) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0335" FT /product="short chain alcohol dehydrogenase-related FT dehydrogenase" FT /note="Belongs to the short-chain dehydrogenases/reductases FT (SDR) family, specificity unclear" FT /db_xref="GOA:Q930L5" FT /db_xref="HSSP:1GZ6" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q930L5" FT /protein_id="AAK64838.1" FT /translation="MSTSNILDGKVVIVTGASSGIGRAIAIRAAEHGAKAVIVSDVVEA FT PREGGEPTASEIRKLGAESVFVKADVSRKVDNDALVAAAEEFGGVDVMVANAGITLKTD FT GAEVPEDDYRRLMSVNLDGPLFGAQAAARQMKALNKQGSIVLMASMGGISGAGITVAYS FT TSKGGVVLMAKSLADALGPDGIRVNAVAPGTIDTELLRTSPGIAQASEGFRQRTPLRRL FT GKPAEVGDAVAFLGSDLSSYVSGTALLVDGGLLAVI" FT gene complement(184339..184821) FT /locus_tag="SMa0337" FT CDS complement(184339..184821) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0337" FT /product="hypothetical protein" FT /note="Has similarity in its amino-terminus to various FT hypothetical proteins; Very weak, probably spurious match FT to part of COG5485, predicted ester cyclase" FT /db_xref="InterPro:IPR009959" FT /db_xref="UniProtKB/TrEMBL:Q930L4" FT /protein_id="AAK64839.1" FT /translation="MSDHHEASYEALKAVVRRNTLEVQSGGNFELFDELFADDFLDHTP FT QPGGTPDKEGARRLYHALREAFPDFHAEIHWQAVDGDIVTTFKTYHGTHQGVVLGSRQR FT AARSSSKPSTPCAFATARSSNTGGSPTSTIFCSNSTRCPPRPPKCRNIKDHHDEHQ" FT gene complement(184847..185620) FT /locus_tag="SMa0339" FT CDS complement(184847..185620) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0339" FT /product="short chain alcohol dehydrogenase-related FT dehydrogenase" FT /note="Belongs to the short-chain dehydrogenases/reductases FT (SDR) family, specificity unclear" FT /db_xref="GOA:Q930L3" FT /db_xref="HSSP:1GZ6" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q930L3" FT /protein_id="AAK64840.1" FT /translation="MSSLFSNKVVTVTGAGSGIGRAIALGLARDGATVHLADRDADGLT FT QTAELIRAEDGRAFTTELDVASELQVVGWIEQIGSTSGRLDAAFNNAGITGPAKRIEDY FT PLEDFQRVIAVNLQSVFLGMKYQIPLIKRNGGGSIVNTASIAALTGPGGMSAYAASKHG FT VQGLTRVVAMENAAHGIRVNAIAPGWTETPMVAANSQQNPAFAALAQNAIPAKRGGKPE FT EIAAAAIWLASDAASYVTGHMLTVDGGMTIGGFEL" FT gene complement(185692..186300) FT /gene="wrbA2" FT /locus_tag="SMa0340" FT CDS complement(185692..186300) FT /codon_start=1 FT /transl_table=11 FT /gene="wrbA2" FT /locus_tag="SMa0340" FT /product="WrbA2 flavoprotein" FT /note="Belongs to the WrbA family of flavoproteins; These FT proteins are found in all three domains of life and contain FT flavodoxin-like domains; This family contains documented FT NAD(P)H:quinine oxidoreductases from the Fungi and FT Viridiplantae; Possibly forms a dimer or tetramer with one FT flavin mononucleotide bound per monomer, family membership" FT /db_xref="GOA:Q930L2" FT /db_xref="InterPro:IPR010089" FT /db_xref="UniProtKB/Swiss-Prot:Q930L2" FT /protein_id="AAK64841.1" FT /translation="MTRVLVLYYSSYGHIETMAGAVAEGARSTGAEVTIKRVPETVPIE FT VADKAHFKLNQAAPVATVAELADYDAIIVGTGTRFGRMSSQMAVFLDQAGGLWARGALN FT GKVGGAFVSTGTQHGGQETTLFSIITNLMHFGMVIVGLPYSHQGQMSVDEIVGGAPYGA FT TTVAGGDGSRQPSQIDLAGAFHQGEIVARTAAALVAARN" FT gene 186524..186718 FT /locus_tag="SMa0341" FT CDS 186524..186718 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0341" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR002818" FT /db_xref="UniProtKB/TrEMBL:Q930L1" FT /protein_id="AAK64842.1" FT /translation="MAKGLLGGGEMKFYPQDALTQAGGRFSQSDAPFSAHVVTDRELIT FT GQNPASAPAVAQELLKRLK" FT gene complement(186903..187337) FT /locus_tag="SMa0343" FT CDS complement(186903..187337) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0343" FT /product="conserved hypothetical protein" FT /note="similar to Atu2189 of Agrobacterium tumefaciens" FT /db_xref="UniProtKB/TrEMBL:Q930L0" FT /protein_id="AAK64843.1" FT /translation="MEKTPDTFVDLGRGTPAWFTFAARILPVGILGQLLSAGLALFRDS FT SLWGLHAALGGALSFPAVSLVAGALFVSRLRGFGWWAGLTFLLYLLQVILAAGGMPLLL FT SFHPVNGAFLLAASLVLLANVERRRSQSLAEDNATAKPGK" FT gene complement(187341..187958) FT /locus_tag="SMa0346" FT CDS complement(187341..187958) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0346" FT /product="NAD(P)H dehydrogenase" FT /note="Belongs to the NAD(P)H dehydrogenase family; FT Contains a flavodoxin-like fold, family membership" FT /db_xref="GOA:Q930K9" FT /db_xref="InterPro:IPR003680" FT /db_xref="UniProtKB/TrEMBL:Q930K9" FT /protein_id="AAK64844.1" FT /translation="MRRNLLLVATQETTVTKTLILLFHPDLKRSKANAALAGAAAKLDG FT VEVADMQAAYPDSMDMFRDGEREARRLLAADRIVLQFPIQWYSTPPLMKAWQDGVLTRM FT FYVTYETEGRALEGTPLMLAATAGNVPESYRPGGRNMFTMEALLAPLRATAHRCGLSCT FT APFIIYQADKLEAEELEAAASNYAATLKNWIAGPLVTRQEAV" FT gene 188006..188893 FT /locus_tag="SMa0347" FT CDS 188006..188893 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0347" FT /product="Transcriptional regulator, LysR family" FT /note="Family membership" FT /db_xref="GOA:Q930K8" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q930K8" FT /protein_id="AAK64845.1" FT /translation="MNLRSLDLNLLVVLDALLDEAHVSRAADRLGLSQPAASAALQRCR FT HLFRDELLERGRGTMRLTSRAEALRAPLKSLLASMMELIGPPEIPLTEIRQVLRITMAD FT YPALFVIAQLQRELQPSAPGIDLVIQSWHGGDAARSALVDGTADLAVSVFTAPDDDLHR FT EELLTEHYVVVMRAGHPAAEAFDLNAWLSYPHILVSGRGDTTTPLDAELSRFGLSRRVG FT LVVPNFQMVPSLLQDSDMIAMLPSRATPSGGSLVSFLPPIPVPGFQLHMAWHRRRAKDA FT ALQHVARILGALLR" FT gene complement(189202..189798) FT /locus_tag="SMa0349" FT CDS complement(189202..189798) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0349" FT /product="conserved hypothetical protein" FT /note="Predicted to bind dinucleotides" FT /db_xref="GOA:Q930K7" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q930K7" FT /protein_id="AAK64846.1" FT /translation="MTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGPASLSSVTDRF FT GASVKAVELKDALQADVVILAVPYDSIADIVTQVSDWGGQIVVDASNAIDFPAFKPRDL FT GGRLSTEIVSELVPGAKVVKAFNTLPAAVLAADPDKGTGSRVLFLSGNHSDANRQVAEL FT ISSLGFAPVDLGTLAASGPIQQFGRPLVALNLLKD" FT gene complement(189834..190730) FT /locus_tag="SMa0352" FT CDS complement(189834..190730) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0352" FT /product="conserved hypothetical protein" FT /note="Contains pirin-like N-terminal and C-terminal FT domains, This family consists of Pirin proteins from both FT eukaryotes and prokaryotes; The function of Pirin is FT unknown but the gene coding for this protein is known to be FT expressed in all tissues in the human body although it is FT expressed most strongly in the liver and heart; Pirin is FT known to be a nuclear protein, exclusively localised within FT the nucleoplasma and predominantly concentrated within FT dot-like subnuclear structures; A tomato homologue of human FT Pirin has been found to be induced during programmed cell FT death; Human Pirin interacts with Bcl-3 and NFI and hence FT is probably involved in the regulation of DNA transcription FT and replication; It appears to be an Fe(II)-containing FT member of the Cupin superfamily" FT /db_xref="InterPro:IPR003829" FT /db_xref="UniProtKB/TrEMBL:Q930K6" FT /protein_id="AAK64847.1" FT /translation="MSHISTADIEQVILPSSRDLGGFSVRRALPAPMRQMVGPFIFLDS FT FGPVRFGEGEGIDTRPHPHIGLSTLTYLLEGELTHRDSERYVQAIRPGEVNVMVAGAGI FT VHSERTPEHQRATGGKLAGLQSWIALPKKSEETAPLFQHLDAGSLPTVSGEGIGMKLLA FT GNLHGRQSPATVFSDLFAAEVHLEAGARYRIDGEHVERAIFVVAGALEIVGQDGNFGQD FT RLLVFKPGSEIVVKATGPARFLAFGGEPLPEKRFIRWNFVATDQERIRHAADLWRERGF FT PGVPDDDEFIPLPENFR" FT gene 190833..191747 FT /locus_tag="SMa0353" FT CDS 190833..191747 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0353" FT /product="Transcriptional regulator, LysR family" FT /note="Contains LysR-type HTH and substrate-binding domain, FT family membership" FT /db_xref="GOA:Q930K5" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q930K5" FT /protein_id="AAK64848.1" FT /translation="MSDPGQPTLDQLRVFIAVVETGSFAAAARKLNRATSVISYTIANL FT EAQLGVTLFDRLSTKKPQLTLEGRTVLAEARSVSNGIDNLRAKVKSMLRGIEPEVHLAL FT DVMLPASRVMDALKAFRKEFPSVSLRLYVEALGAVTQIVLNRTATVGISGPLDVDVLGL FT ERIGVGFVQLVPVAAPDHPLAGGSHAPGAARSHIQLVLTDRSPLTQGHEFAVVGTHTWR FT LADLGAKHMLLKEGIGWGNMPEPMVRDDLADGRLVQLDLPDCKGGPYRLQAIYRTDTPP FT GPAGRFLIEHFQAQDAKTPTTAW" FT gene 191922..192416 FT /locus_tag="SMa0355" FT CDS 191922..192416 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0355" FT /product="Transcriptional regulator, LysR family" FT /note="Bacterial regulatory helix-turn-helix protein, lysR FT family, family membership" FT /db_xref="GOA:Q930K4" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q930K4" FT /protein_id="AAK64849.2" FT /translation="MKGPGTPTFDQLKVFLTVVDVGSFAGAARKLNRATSVVSYTIANL FT EAQLGFALFDRDSTRRPCLTEAGRIVLSETRSVANGVNRLRAKAQGLLQGLEPSLSIAL FT DAMLPASRVLDALKGFRSEFPTIPLQIRTEQFRALSMLVRQGDIVIRHEYGRRCNGGPL FT A" FT gene complement(193272..193553) FT /locus_tag="SMa0357" FT CDS complement(193272..193553) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0357" FT /product="conserved hypothetical protein" FT /note="Has partial similarity to acetyltransferase domain" FT /db_xref="UniProtKB/TrEMBL:Q930K2" FT /protein_id="AAK64851.1" FT /translation="MVDARPVGDYPNLRQLAFLHVSHDWRGKKLALRLYQLCKDTVVGS FT GAEGFYISSTPTRRTVEFYLRQGAKLMARPDTTLVSIEPDDIHLAHWF" FT gene complement(193562..193807) FT /locus_tag="SMa0359" FT CDS complement(193562..193807) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0359" FT /product="conserved hypothetical protein" FT /note="Has partial similarity to acetyltransferase domain" FT /db_xref="UniProtKB/TrEMBL:Q930K1" FT /protein_id="AAK64852.1" FT /translation="MTMGTIIRPLQRAEVELVWQIERREVVQEIYEVADGRLHLRPQFY FT DTREWPDGEPEIYTPILFDCFDHDGVFLGALLEKNL" FT gene complement(193804..194493) FT /locus_tag="SMa0360" FT CDS complement(193804..194493) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0360" FT /product="putative transposase" FT /note="Transposon-related functions, family membership" FT /db_xref="UniProtKB/TrEMBL:Q930K0" FT /protein_id="AAK64853.2" FT /translation="MSDPFPDEVDEALWDEACRRAEAVREFLKHRPGKMTAADVALLAT FT EVETSRATAYRLIKLFRAGGTVMSLVDRKRGRPEGHRVLDDKREEIIRTTINRHYLTRN FT RPTVSQLVRDVQTNCISAGLKRPHRRTIKARLEEIEPQRRAKRRGETEIVKQTQAVPGV FT FAASRPLQVVQVDHTKADIFVVDEETRQPIGRPWLTLAMDVCSRMVTGFYLTMDAPSRL FT STRGVAP" FT gene 195082..196866 FT /locus_tag="SMa0364" FT CDS 195082..196866 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0364" FT /product="hypothetical protein" FT /note="Contains weak similarity in amino terminus to a FT small domain pfam02563, found in polysaccharide FT biosynthesis/export proteins" FT /db_xref="GOA:Q930J9" FT /db_xref="InterPro:IPR003715" FT /db_xref="UniProtKB/TrEMBL:Q930J9" FT /protein_id="AAK64854.1" FT /translation="MDHATKSEATRGSSALPYSDGRSTAAPFHRVRHGLFTAAFSIIPF FT SFIVLFAASAGGQSAAVNGLAPQDAVEIHLPGWHTLFGDAAKAALPNGTFTIGSAGALE FT LPGIGRVPAAGLHASELAKLIADRLQARSGSHDSPVTIVEPRRPALEGQRVSPPAKQPA FT MVEREAMQALGGERSSVEALLRDLAAARKEAEAAREEERAAHQAARDASILHRRHLAAE FT RQRAAKLTQELTAARVDLETMKTQLKQETNAAHDWKAAVAMIKAAREAAARERSERAAL FT EEELRAARREIEAARNGAQMVASEREEPLRHDMVPATGALDTMGVAADGAGAQARKAAD FT TMAERESALEQQRQRAEGLARDLTVLRRDMDSLQAKVAGAIRSKAAALRARRAGEAALV FT DAKRALVEERQKIGVYARDLALALQSAAALESRAKLAAAEQAAAAQARKIAEAAAKRAG FT EALALELEAGKSLARELDTARRERDAAKEELTQVLAQHTSLKGERAWANGRELSAARQQ FT HDGKKARTERRVEDVDEPKTRAGNHASERAKTARATGTRSVRELGARKGRTLETRKPLK FT IALPNALLPKRWLAPGLW" FT gene 196912..197808 FT /locus_tag="SMa0367" FT CDS 196912..197808 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0367" FT /product="conserved hypothetical protein" FT /note="Similar to mll2007 from Mesorhizobium loti FT MAFF303099; This predicted protein is fairly glycine- rich" FT /db_xref="HSSP:1GBJ" FT /db_xref="UniProtKB/TrEMBL:Q930J8" FT /protein_id="AAK64855.1" FT /translation="MVMRKYLTVALLITVAIGPASALDIGVGVSVGGTGVSAGVRTGKN FT GTSAGVSTSVGGIGGAKAGTAAGKSGGSSIGASGNLGGIGVGAGVGVGKNGTSAGIGAG FT IGGAKAGASVGTSGGSSIRASGNVGRASGGVSTGSVPGAGLSGTGPGNAPSGLAARSGS FT PATGTASRILGAAPEKGVRPSIALPRILWPLKSRRRHERGEWSYPLRFPAPIAAITGTP FT RAVVRVCRQAIAQAASALGGVRVRAVSAGPLHRGRRGTLTAPLDVRIDYAGQGGREVRQ FT ARIRCRLDTSGRVIAVI" FT gene 197906..198172 FT /locus_tag="SMa0369" FT CDS 197906..198172 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0369" FT /product="hypothetical protein" FT /note="very weak match to a partial EAL domain" FT /db_xref="InterPro:IPR001633" FT /db_xref="UniProtKB/TrEMBL:Q930J7" FT /protein_id="AAK64856.1" FT /translation="MYPEMPRAISRSTMDVETDDKSQTIVRGILALAHGLGMRVTAEGV FT ETADQANWLRNQGCDRLQGNLFSAPIPAGSMEKFLRQSSMASQ" FT gene complement(199105..200004) FT /locus_tag="SMa0372" FT CDS complement(199105..200004) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0372" FT /product="Transcriptional regulator, LysR family" FT /note="Contains LysR-type HTH and substrate-binding FT domains, family membership" FT /db_xref="GOA:Q930J5" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q930J5" FT /protein_id="AAK64858.1" FT /translation="MNDYKALRTFLLAAEKRNFAQVARELDMTPAAVTRAIAALEAELG FT VQLFVRTTRQVSLTTDGAIFAAQLQPAVKTIEDARREVMNAHKADEGRLRISAPTWFGK FT AVLPPILSAFKERYPKMSFEISLSDGLVNIVDDDYDLAIRISSQPSDKFTIWRKIRVVP FT RILVAAPGSRFVDMQHPNELTPDDCLAYSGDSRRENWVLSDGGSSITISAGRAFSANNG FT EVLADIAADGAGVAMLPGFHIFEHLRTGRLVHVFKGWAPPDLWLTLYYPPYQALPPRIA FT SFSKFFEEQVPAHMVMLD" FT gene 200116..201048 FT /locus_tag="SMa0374" FT CDS 200116..201048 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0374" FT /product="dioxygenase/lyase" FT /note="Weak similarity to pfam00903, Glyoxalase, FT Glyoxalase/Bleomycin resistance protein/Dioxygenase FT superfamily, conserved hypothetical protein" FT /db_xref="GOA:Q930J4" FT /db_xref="InterPro:IPR004360" FT /db_xref="UniProtKB/TrEMBL:Q930J4" FT /protein_id="AAK64859.1" FT /translation="MIKDIKGLHHVTSMASDARQNNRFFTDTLGLRRVKQTVNFDDPSV FT YHLYYGDETGSAGTVMTYFPFPNMMLGRPGVGEVGETQFSVPKGSLKFWQDRFTTQGVD FT GLERDTVFGADRLRFMGPDGDSFALIESADDKRAPWLADGIPDDAAIRGFAGARFSLHD FT SAATEELLGFMGYERAEKEGDVVRFIISNGNGADTIDLLALPKTPFARQGAGSVHHIAF FT AVDNREKQLEVRKALMDTGYQVTPVIDRDYFWAIYFRTPGGILFEVATNEPGFNRDEDT FT AHLGEALKLPVRYEEYRGQIQANLVPLAA" FT gene 201366..202055 FT /locus_tag="SMa0376" FT CDS 201366..202055 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0376" FT /product="hydrolase" FT /note="Similar to YcaC related amidohydrolases; E.coli YcaC FT is an homooctameric hydrolase with unknown specificity; FT Despite its weak sequence similarity, it is structurally FT related to other amidohydrolases and shares conserved FT active site residues with them; Multimerisation interface FT seems not to be conserved in all members, family FT membership" FT /db_xref="GOA:Q930J3" FT /db_xref="HSSP:1YAC" FT /db_xref="InterPro:IPR000868" FT /db_xref="UniProtKB/TrEMBL:Q930J3" FT /protein_id="AAK64860.1" FT /translation="MSKLEVLTPANSQLIFIDQQPQMAFGVQSIDRQTLKNNVVGLAKA FT AKIFNVPTTITTVETQSFSGNTFPELLAVFPENDLLERTSMNSWDDQNVRDALAKNAAN FT GRKKIVVSGLWTEVCNTTFALSALHDVPEYEIYMVADASGGTSSDAHKYAMDRMVQAGV FT IPVTWQQVLLEWQRDWARKETYDAVTTLVKEHSGAYGMGIDYAYTMVHGAEERVKHGKR FT IGPNPAK" FT gene 202120..202407 FT /locus_tag="SMa5018" FT CDS 202120..202407 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa5018" FT /product="Conserved hypothetical protein" FT /note="pfam07235, DUF1427, Protein of unknown function FT (DUF1427); This family consists of several bacterial FT proteins of around 100 residues in length; The function of FT this family is unknown" FT /db_xref="InterPro:IPR020017" FT /db_xref="UniProtKB/TrEMBL:B3KLW6" FT /protein_id="ACF07964.1" FT /translation="MKVYLLSLGAGLLVGIVYSLLNVRSPAPPVIALVGLLGILVGEQI FT IPFAKTLWRSEPAAISWLHQIKPHMFGHLPKGSDRIEIAHQAKARVEERS" FT gene 202407..204389 FT /locus_tag="SMa0380" FT CDS 202407..204389 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0380" FT /product="hydrolase" FT /note="Metal-dependent hydrolase with TIM-barrel fold; FT Similar to YtcJ_like metal dependent amidohydrolases; YtcJ FT is a Bacillus subtilis ORF of unknown function; The FT Arabidopsis homolog LAF3 has been identified as a factor FT required for photochrome A signalling; Very similar to S; FT meliloti SMa1819, family membership" FT /db_xref="GOA:Q930J2" FT /db_xref="InterPro:IPR017909" FT /db_xref="UniProtKB/TrEMBL:Q930J2" FT /protein_id="AAK64861.1" FT /translation="MATRRSFLGGASSLAFANFFSPAKAADPNQTGVDTMHPDLILHNG FT RVTTLDRTNPNATAIAIKDGLFLEVGSDSEVMALAGSGTKIVDLKGKGVLPGLIDNHTH FT VVRGGLNYNMELRWDGVRSLADAMDMLKRQVAITPAPQWVRVVGGFTEHQFAEKRLPTI FT EEINAVAPDTPVFLLHLYDRALLNGAALRAVGYTRDTPNPPGGEITRDANGNPTGLLLA FT KPNAGILYSTLAKGPKLPLDYQVNSTRHFMRELNRLGVTGVIDAGGGFQNYPDDYEVIQ FT KLSDENQMTVRLAYNLFTQKPKEEKQDFLNWTQSVKYKQGNDYFRHNGAGEMLVFSAAD FT FEDFRQPRPEMAPEMEGELEEVLRVLAENRWPWRLHATYDETISRALDVFEKVNKDIPL FT EGLNWFFDHAETISDRSIDRIAALGGGIATQHRMAYQGEYFAERYGHGVAEATPPIRRM FT LDKGVNVSAGTDATRVASYNPWVSLSWMVTGKTVGGMQLYPRANCLDRETALRMWTEKV FT TWFSNEEGKKGRIEKGQFADLVVPDKDFFSCAEDEISFIVSELTMVGGKIVYGAGDFKT FT LDENEIPPAMPDWSPVRKFGGYAAWGEPERAGARSLRRTAISTCGCASDCGVHGHDHAG FT AWTSKLPIADLKGFFGALGCSCWAV" FT gene 204550..204993 FT /locus_tag="SMa5019" FT CDS 204550..204993 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa5019" FT /product="conserved hypothetical protein" FT /note="Predicted membrane protein; Similar to S; meliloti FT SMa1817" FT /db_xref="InterPro:IPR011637" FT /db_xref="UniProtKB/TrEMBL:B3KLW7" FT /protein_id="ACF07965.1" FT /translation="MTYHSQLSNPIRSGVARVVGSPVVRTVSLLALCAAYIQGPLTKIF FT DFNGALAEMDHFGLHPAPFFAVAVIVFELTASAMVISGLLRWAGALALAGFTLLATFIA FT LRFWEMAPGMDRMMATNAFFEHLGLAGAFVFVAAFDLTKGAGK" FT gene 204990..206588 FT /locus_tag="SMa0383" FT CDS 204990..206588 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0383" FT /product="conserved hypothetical protein" FT /note="Bacterial protein of unknown function (DUF894), FT transmembrane domain" FT /db_xref="InterPro:IPR010290" FT /db_xref="UniProtKB/TrEMBL:Q930J1" FT /protein_id="AAK64862.1" FT /translation="MSAAKSSGGTFAPLAQPVFAVLWTATVLGNTGSFMRDVASAWLMT FT DLSASPAAVAMVQAAGTLPIFLLAIPAGVLTDILDRRKFLIAVQLLLASVSISLMVLSQ FT TGMLSVSSLIGLTFLGGIGAALMGPTWQAIVPELVKREDVKSAVALNSLGINIARSIGP FT AAGGLLLAAFGAGITYGADVASYIVVIAALVWWPRAKNANDALQENFFGAFRAGLRYTR FT SSTPLHVVLLRAAIFFAFASAVWALLPLVARQLLGGDAGFYGILLGAVGAGAIGGALVM FT PKLRERLSSDGLLLGAALITAAVMGVLALAPPKVVAIIVLLFLGGAWITALTTLNGTAQ FT SVLPNWVRGRGLAVYLTVFNGAMTAGSLGWGAVGEAVGIQSTLIIGAIGLLIAGLIMHR FT VKLPAGDADLVPSNHWPEPLVAEPIAHDRGPVLILIEYKVEKQHRTAFLHAIDHLSRER FT RRDGAYGWGVTEDSADPEKIVEWFMVESWAEHLRQHKRVSNADADLQGKVLAYHVGPDK FT PVVRHFMTINRPGAA" FT repeat_region complement(207549..208846) FT /rpt_family="ISRm3" FT /note="SMa3002; predicted by homology" FT gene complement(207586..208788) FT /locus_tag="SMa0384" FT CDS complement(207586..208788) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0384" FT /product="TRm3 transposase" FT /note="Elements of external origin; Transposon-related FT functions, high confidence in function and specificity" FT /db_xref="GOA:P80011" FT /db_xref="InterPro:IPR001207" FT /db_xref="UniProtKB/Swiss-Prot:P80011" FT /protein_id="AAK64863.1" FT /translation="MAIEKELLDQLLAGRDPSEVFGKDGLLDDLKKALSERILNAELDD FT HLDVERLEGGPANRRNGSSKKTVLTGTSKMTLTIPRDRAGTFDPKLIARYQRRFPDFDD FT KIISMYARGMTVREIQGHLEELYGIDVSPDLISAVTDTVLEAVGEWQNRPLELCYPLVF FT FDAIRVKIRDEGFVRNKAVYVALAVLADGSKEILGLWIEQTEGAKFWLRVMNELKNRGC FT QDILIAVVDGLKGFPEAITAVFPQTIVQTCIVHLIRHSLEFVSYKDRRTVVPALRAIYR FT ARDAEAGLKALEAFEEGYWGQKYPAIAQSWRRNWEHVVPFFAFPEGVRRIIYTTNAIEA FT LNSKLRRAVRSRGHFPGDEAAMKLLYLVLNNAAEQWKRAPREWVEAKTQFAVIFGERFF FT N" FT gene complement(209020..210132) FT /gene="hisC3" FT /locus_tag="SMa0387" FT CDS complement(209020..210132) FT /codon_start=1 FT /transl_table=11 FT /gene="hisC3" FT /locus_tag="SMa0387" FT /product="HisC3 histidinol-phosphate aminotransferase" FT /EC_number="2.6.1.9" FT /note="Also known as imidazole acetol-phosphate FT transaminase 1Similar to HisC, Histidinol- FT phosphate/aromatic aminotransferase and cobyric acid FT decarboxylase, pfam00155, Aminotransferase class I and II, FT specificity unclear" FT /db_xref="GOA:Q930J0" FT /db_xref="InterPro:IPR015422" FT /db_xref="UniProtKB/Swiss-Prot:Q930J0" FT /protein_id="AAK64864.1" FT /translation="MAIPSRPIREEIRSIAPYNAGLTLEEVRAKYHVDEVAKLSSNENP FT LGPSPALRRLFPDIGELARLYPDPQGRALCARLAASFDVENNQVILGNGSEDLIAVICR FT SVVRAGDTVVTLYPSFPLHEDYTTLMGGKVDRVTVTPDLSVDMDALLAAIARKPRMLMF FT SNPMNPVGSWLTPLQLAKVVAALDPETLIVVDEAYAEYAAGDDYPSAAEVLKVTGLNWV FT VLRTFSKAYGLAGLRIGYGIVSDGSLCDFFNRARTPFNTNAIAQVSALAAFDDTYHLNR FT SVELALVERERMKKELATMGYRIAPSKCNFLFFDARTEATPVAEALLRRGVIVKPWKQP FT RFETYIRVSIGSPVENDHFIHALKEVEAVG" FT gene 210263..211030 FT /locus_tag="SMa0389" FT CDS 210263..211030 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0389" FT /product="short chain alcohol dehydrogenase-related FT dehydrogenase" FT /note="Belongs to the short-chain dehydrogenases/reductases FT (SDR) family, specificity unclear" FT /db_xref="GOA:Q930I9" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q930I9" FT /protein_id="AAK64865.2" FT /translation="MTSPIFDLSGRRALVTGASRGIGQSIAVALAEAGAHVAVTARTVE FT GLAETRALIEKTGRRAVALAQDVRDVEACASVTRAAAEGLGGLDILVNNAGFENVRPSF FT DVDEALWDTIVSTNLKGAFFCAQAAGRIMADANGGAIVNLCSLTSYVGIPTAVPYGASK FT SGLLGVTRALATEWAAHNIRVNAIAPGYFRTAMTAGFYEDEDWQSRMLEKIPQRRFGKE FT SDIGGVAVFLCSDAAAYITGHCIPADGGYLASI" FT gene 211336..212469 FT /locus_tag="SMa0391" FT CDS 211336..212469 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0391" FT /product="ABC transporter, ATP-binding protein" FT /note="Family membership" FT /db_xref="GOA:Q930I8" FT /db_xref="HSSP:1G29" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q930I8" FT /protein_id="AAK64866.1" FT /translation="MGAVAAGLRPTGSVNPGAVSVKDVGMAFGDVHAVRNASFDLPKGR FT FLTILGPSGSGKTTLLRMIAGFDRPTHGEIFINGRPVSAVPPHKRAIGMVFQKLALFPH FT MTAAENVAFPLKMRRHDARTIPEKVERYLDLVRLGGYGDRRINELSGGQQQRVAIARAL FT VFEPDLLLLDEPLAALDRKLREEMQLEFRRIQKELGVTTINVTHDQREALVVSDEIIIM FT NGGAIQQKARPVDAYRAPSNAFVANFIGVTNFLEGRIVELTSTQAVFETNGVRLVGIAA FT DAALAPGLSCSGALRAEQIRIAPMGGRLDELETLVDGQVVDCIFEGDRVVYEIRVPDLA FT GVLMRVFDHDPESHLQFGPGDEVRLGWNARDMHVFQK" FT gene 212503..213618 FT /locus_tag="SMa0392" FT CDS 212503..213618 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0392" FT /product="ABC transporter, periplasmic solute-binding FT protein" FT /note="Most similar to PotD, Spermidine/putrescine-binding FT periplasmic protein, family membership" FT /db_xref="GOA:Q930I7" FT /db_xref="InterPro:IPR006059" FT /db_xref="UniProtKB/TrEMBL:Q930I7" FT /protein_id="AAK64867.1" FT /translation="MSHEKFLSAQIGRRTLLASMAAAGASAGLSTLGVSRAFAQEPEKP FT AEIIVRAWGGSWVDALKAGVSDSFTKMTGIAVRHDLTEDNEIQPKVWAAVAQKRVPPIH FT INWDTTTNATKSALRGVTEDLSDLPNLKNATDLAKPVGLDGYPIVNTYGYVYVLAYRPS FT AFPNGAPKSWKDLLDPKLKGRIALYNDGIGFHFPAQVAGGGKLEDIPANMQPAWDFISK FT IKEQQPLLGEDPDFTTWFQKGEIDAACTISTNAREAKKNGIEIAWVVPEEGAKFDTDGL FT WIPKGLPENELYWAKQYINHALTKEAQQIWLDGLGLPGVIPGITPPADLVGDPSYPTTE FT EDFKQLIRISAKVQVENESQWFAKFKEIMQG" FT gene 213683..214627 FT /locus_tag="SMa0394" FT CDS 213683..214627 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0394" FT /product="ABC transporter, permease" FT /note="Most similar to PotB, ABC-type spermidine/putrescine FT transport system, permease component I, family membership" FT /db_xref="GOA:Q930I6" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:Q930I6" FT /protein_id="AAK64868.1" FT /translation="MRAPRAAYPLTWRVMDVLERLAAIVWPSSFQRGLPYLMLMPALVL FT VGLLVLGLVQIGDTSLRTLDTNTFLMSESYTLANYQRVLTESFFATVAGRSLVGSVIVT FT VITLLLAFPYAYLMVRTPSSALRKFLLVALFLPFFIGQVVRAYGWLIILGNQGMVNEAL FT GLVGVPPIRLLYNYPAVLFGLVQYMLPFAVLMLAPALTAIPSELEAAAASLGAGWTRTF FT RHIVLPLSRPGLVGAGLVVLTLSLTDFAIPAILGGGTQDFIANAIYDQFFRTSDQGMGA FT TLSLMLVAVGSMLVGVVFMLFGAGTLAMTGDRK" FT gene 214624..215424 FT /locus_tag="SMa0396" FT CDS 214624..215424 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0396" FT /product="ABC transporter, permease" FT /note="Most similar to PotC, ABC-type spermidine/putrescine FT transport system, permease component II, family membership" FT /db_xref="GOA:Q930I5" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:Q930I5" FT /protein_id="AAK64869.1" FT /translation="MTGSKSKSFVLWAFVTTALLMLSAPTVVVLGASFTAGNIITFPPD FT GLSLKWYGAIAQASDLRQAFVRSLIVATICTLVSIPVGTLAGIALAKYRVRFARSIQIY FT LLLPFTIPLIGSGIGMMLVLGNMGVLGKLWPVGIACAVINLPFMIWAVTASASNLSPDL FT ELAAANCGAPPLQRFLYITLPAVLPGVITGSLLMFILALNEFLVSLLLVDARSVTLPVQ FT IYNSIRSIITPDLAAISVVFIACAGLAIALLDRLVGLDIFLKSK" FT gene 215421..216791 FT /gene="hisD2" FT /locus_tag="SMa0398" FT CDS 215421..216791 FT /codon_start=1 FT /transl_table=11 FT /gene="hisD2" FT /locus_tag="SMa0398" FT /product="HisD2 histidinol dehydrogenase" FT /EC_number="1.1.1.23" FT /note="FUNCTION: Catalyzes the sequential NAD-dependent FT oxidations of L- histidinol to L-histidinaldehyde and then FT to L-histidine (By similarity), CATALYTIC ACTIVITY: L- FT histidinol phosphate + 2-oxoglutarate = 3- (imidazol-4-yl)- FT 2-oxopropyl phosphate + L-glutamate, CATALYTIC ACTIVITY: FT L-histidinol + 2 NAD(+) = L-histidine + 2 NADH, COFACTOR: FT Pyridoxal phosphate (By similarity); Binds 1 zinc ion per FT subunit (By similarity), PATHWAY: Histidine biosynthesis; FT seventh step, PATHWAY: Histidine biosynthesis; ninth (last) FT step, SUBUNIT: Homodimer (By similarity), SIMILARITY: In FT the N-terminal section; belongs to the histidinol FT dehydrogenase family, SIMILARITY: In the C- terminal FT section; belongs to the class-II pyridoxal- FT phosphate-dependent aminotransferase family; Histidinol- FT phosphate aminotransferase subfamily, function unclear" FT /db_xref="GOA:Q930I4" FT /db_xref="HSSP:1K75" FT /db_xref="InterPro:IPR012131" FT /db_xref="UniProtKB/Swiss-Prot:Q930I4" FT /protein_id="AAK64870.1" FT /translation="MTLRPQLARYKDKTMTSVSFYEYSKLNAEEKAALLRRSETDISGF FT IEKVAPILEAVRTEGDKALARFGRELDKADVTEANLKVTAAEFDAAFKLVDASVLESVQ FT FGIDNIRKFHEEQKPEAMWLKEIRPGAFAGDRFTPIQSVALYVPRGKGSFPSVTMMTSV FT PAVVAGVPNLAIVTPPAPDGSVDAATLVAARLAGVETVYKAGGAQAVAAVAYGTETVKP FT ALKIVGPGSPWVVAAKRSLSGVIDTGLPAGPSEVMILADDTVHGGLAALDLLIEAEHGP FT DSSAYLVTHSGRVAEEALAALPEHWARMTEQRTAFSKTVLSGKTGGIVLTSSIEESYEF FT VNAYAPEHLELLSEQPFIHLGHITEASEILMGTHTPVSIANFSLGPNAVLPTSRWARTF FT GPLSVTDFVKRSSIGYVTAPAYPEFARHSHNLAIYEGFSSHALAVSPVRDAYLKKGA" FT gene 216795..217808 FT /locus_tag="SMa0400" FT CDS 216795..217808 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0400" FT /product="Dehydrogenase, Zn-dependent" FT /note="COG1063: Threonine dehydrogenase and related Zn- FT dependent dehydrogenases, function unclear" FT /db_xref="GOA:Q930I3" FT /db_xref="InterPro:IPR013154" FT /db_xref="UniProtKB/TrEMBL:Q930I3" FT /protein_id="AAK64871.1" FT /translation="MKAVRLYDIRDLRVEEVAELAAPPPGFVNLEVRAAGICGSDLHNY FT RTGQWISRRPSTAGHEFCGRVTAIGEGVSHLVRGDVVSADSRMWCGTCPACASGRSNVC FT ETLGFLGEVCDGGFAEAVQLPSRLVFRHDPKLSPHVAAMAEPLAVALHAVRRLAVPDGA FT PVLVMGCGTIGGLSALLLSRLHQGPLLLTDLNADKAALVAEVTGGVVVALDGAAIEEAL FT PGTRLRHALDATGSIQAIARALDILSGGGALALVGIGHGKLDLDPNILVEREISLVGCH FT AFAGELPEAIELLADLAPALQRFIEVLPTLDDVPEAYERLLRGESNALKTIIEVAG" FT gene 217871..218602 FT /locus_tag="SMa0402" FT CDS 217871..218602 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0402" FT /product="Transcriptional regulator, GntR family" FT /note="Bacterial regulatory proteins, gntR family; This FT domain comprises the N-terminal HTH-containing region of FT GntR-like bacterial transcription factors; At the C FT terminus there is usually an effector- FT binding/oligomerisation domain; The GntR-like proteins can FT be divided into six sub-families: MocR, YtrR, FadR, AraR, FT HutC and PlmA, family membership" FT /db_xref="GOA:Q930I2" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q930I2" FT /protein_id="AAK64872.1" FT /translation="MNTLSDSASPLYEKVKDFVLGNIGSGKWARNSRLPSENELVSALG FT VSRMTVHRALRELTSEGHLRRIQGVGTFVAPPRPRSTLIEISNIITEIKTRGSRHRAEV FT VVLERIARPEPELLLAFEFETVKPVDHSVVIHFENDLPVQLEERYVNPNLVSGYIDQDF FT AAVATYDYLQNATPLTEVEHLISALPANAEQARLLNVRPGDCCLILHRKTWTGPVVATV FT NTFTYVGSRYSLGSRYLHGGK" FT gene 218550..219938 FT /locus_tag="SMa0403" FT CDS 218550..219938 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0403" FT /product="hypothetical protein" FT /note="Similar to hypothetical protein RSP_2154 of FT Rhodobacter sphaeroides 2.4.1, conserved hypothetical FT protein" FT /db_xref="UniProtKB/TrEMBL:Q930I1" FT /protein_id="AAK64873.1" FT /translation="MSAAATRSAAAICTAASDRRSYALKDPSGKNAMSQPTSRTAEIRK FT VAKTGDGKAEQLLAELLRDLFRIEARNVAINHDQYSLNSLNGFFETEDGAFFFKFHQEE FT GEEAMSGEYYRADILARAGLPVDQPLLMSVIPGEQILVYRRRTDPRFSDVLRALDLKDD FT AAARGRAVEAERRLSEAVLKVYLATLHTVGAREVAAEPIHRLFYERLVDRSAASYPGGR FT MASFYVGKDFAFPNLTLDWETLSRCRFVVNGIEYSDSIGALFDAAHERLNPARLADAGG FT VVAHGDAHNANVWYEERDGGAHLSFFDPAFAGENIPALLAEVKTTFHNILAHPLWLYDP FT AMAAGRYKASAVLDGALLRVTTDFAPSPVRRALLDVKAEALWRPLLSELKARGMLPADW FT RRVIRLGLFLCPTLVMNLRAGATTHNAISSLIGFSVAVMAGSEPVAGDDLISRFIDTID FT PDNG" FT gene 219940..221085 FT /locus_tag="SMa0404" FT CDS 219940..221085 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0404" FT /product="FMN-dependent dehydrogenase" FT /note="Has a glycolate oxidase-like (GOX-like) FMN-binding FT domain; This protein familly includes a widespread family FT of homologous FMN-dependent a-hydroxyacid oxidizing FT enzymes; This family occurs in both prokaryotes and FT eukaryotes, function unclear" FT /db_xref="GOA:Q930I0" FT /db_xref="HSSP:1LTD" FT /db_xref="InterPro:IPR017934" FT /db_xref="UniProtKB/TrEMBL:Q930I0" FT /protein_id="AAK64874.1" FT /translation="MALVNIDDFRDLARRRRPKIFFDYIDGGSFEEETMRANRSDFSRL FT TLRQNVLVEPQPQDLATAYLGKRHPLPFMLGPVGFLGLYSGKGEVKAVRAAHAAGIPFC FT LSTFSIASLADLRIVTDGPLHFQLYVLEDRSLCEEFLRAAEYAGVDTLFVTVDTAITGI FT RERDVRNGFRSLTRVTPDLFARLALKPRWLAEVVLAGMPSVRAVEHRPEFGRGALEQAA FT NLSRRIDKTLSWKDIAWLRERWAGKLVIKGVLTPADAVRARDLGCDGVVVSNHGGRQLD FT GAPSTIRALPSIRATVGTDFCLMLDGGIRRGADVIKAIALGADGVMLGRAYAYGLSAAG FT QAGVAEVIAILEREISISLALMGIASVEQLKALGAEAVSTL" FT gene 221438..221725 FT /locus_tag="SMa0405" FT CDS 221438..221725 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0405" FT /product="transposase, fragment" FT /note="Family membership" FT /db_xref="UniProtKB/TrEMBL:Q930H9" FT /protein_id="AAK64875.2" FT /translation="MTPKKCQSSESDHSGRISKIGDGSVRTALYEAANVILTRPVKGSD FT LKGWALAVARRAGPRKARVALARKLAVVLHCMLRDRTNFIAHKGAPALAA" FT gene 222078..222866 FT /locus_tag="SMa0407" FT CDS 222078..222866 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0407" FT /product="conserved hypothetical protein" FT /note="pfam07040, DUF1326, Protein of unknown function FT (DUF1326); This family consists of several hypothetical FT bacterial proteins which are found in Rhizobium, FT Burkholderia, Ralstonia, Aurantimonas and Polaromonas FT species; Members of this family are typically around 210 FT residues in length and contain 5 highly conserved cysteine FT residues at their N-terminus; The function of this family FT is unknown" FT /db_xref="InterPro:IPR014581" FT /db_xref="UniProtKB/TrEMBL:Q930H8" FT /protein_id="AAK64876.1" FT /translation="MELRVGGAKPSDNSPAASKGFSDPLDSHGVPGRSKQYLIHSAFTG FT TIGGVAMAYVDWAIKGPKIASCSCDYGCPCEFNGKPTEGLCEGLECMLIEEGWFGDLRL FT DGLKVAAVYRWPGPVHEGGGVVRGFFDANADQAQIDALFTILGGKEQEPTTVFNIYGST FT IAQELEPIFAPIEFHSDIEKRTGGFRIDGHLELELEPIRNPVTGAPHRARIVLPEGFEF FT RQAEIASGTFNANGEIAMGRQKRYGALWRAAYGPYGIIEE" FT gene complement(223861..224175) FT /locus_tag="SMa0412" FT CDS complement(223861..224175) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0412" FT /product="conserved hypothetical protein" FT /note="Belongs to a group of proteins similar to the Ethyl FT tert-butyl ether degradation protein EthD from Rhodococcus FT ruber" FT /db_xref="InterPro:IPR009799" FT /db_xref="UniProtKB/TrEMBL:Q930H6" FT /protein_id="AAK64878.2" FT /translation="MIKMSVYYPADGGSKFDHDYYRTRHMPLIQERLGDACLRYEIDKG FT LAGREPGSAPEFVAACHVYSPSLATFQEALGPHRSEIAADVANYTDIAPIVQISEVVEG FT " FT gene 224805..226475 FT /locus_tag="SMa0414" FT CDS 224805..226475 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0414" FT /product="conserved hypothetical protein" FT /note="Has an ATP dependent DNA ligase domain; Together FT with adjacent ORF, SMa0417, might be part of a pseudogene" FT /db_xref="GOA:Q930H5" FT /db_xref="InterPro:IPR014144" FT /db_xref="UniProtKB/TrEMBL:Q930H5" FT /protein_id="AAK64879.1" FT /translation="MADNLSKDRAKRDFKKTREPSGEAQVKPSNRRRFVIQKHDATRLH FT YDLRLELDGVFKSWAVTKGPSLDPSDKRLAVEVEDHPLDYGDFEGTVPKGQYGGGTVML FT WDRGYWEPEGRKSPEEALKKGDFKFTLHGKRLHGSFVLVRMRNDRDGGKRTNWLLIKHR FT DDYSVDENGAAILEENATSVASGRSMEQIAEGTGRKPRPFMMANADVEADAVWDSKHGL FT AAEERKKGSRRDVATSTAADLPDFIEPQLCETLARPPASDDWLHEIKFDGYRIQMRIAD FT GKVTLKTRKGLDWTAKYPEIADAASELPDCIIDGEICALDDNGAPDFAALQAALSEGKT FT GNLVYFAFDLLFDGGEDLRSMRLVERKKRLEDFLAAGSDDPRIRYVDHFESGGDAVLRS FT ACKLSLEGIVSKQMDAPYQSGRTDTWAKSKCRAGHEVVIGGYATTNGKFRSLLVGVHRG FT DHFVYVGRVGTGFGAAKVERFFPKLKALEASKSPFTGIGAPKKEKEVTWLPDGRALPAC FT RVRSSTDVVRFRRSGRSPRALRSDRSEGRASCPRRLSPV" FT gene 226536..227393 FT /locus_tag="SMa0417" FT CDS 226536..227393 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0417" FT /product="conserved hypothetical protein" FT /note="contains partial domains similar to those found in FT eukaryotic-type DNA primases and ligases; Together with FT adjacent ORF, SMa0414,may comprise a pseudogene" FT /db_xref="GOA:Q930H4" FT /db_xref="InterPro:IPR002755" FT /db_xref="UniProtKB/TrEMBL:Q930H4" FT /protein_id="AAK64880.1" FT /translation="MKPELVAEIEFAGWTADGLVRQAAFKGLREDKPAKEVQAEKPSPP FT AKTDTPEPGPSAKTRPVRRKGAKAEVMGVLISSPDKPLWPDAGDGEPVTKEDLARYHEA FT VGTLFDLDPGPDVPFATVVAAAREMRDRLDELGLVSFCKTTGGKGLHVVTPFAVNKRKP FT LSWAEAKGFAHDVCEQMARDNPDLYLIKMSKSLRGGRIFLDYLRNDRMATAVAPLSPRA FT RPGATVSMPLNWTQVKSDLYPKRFTVRTVPALLAKTTAWQDYCDGERPLEQAIKRLGKS FT RRAA" FT gene 227425..228318 FT /locus_tag="SMa5020" FT CDS 227425..228318 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa5020" FT /product="conserved hypothetical protein" FT /note="Very similar to S; meliloti SMb21696" FT /db_xref="UniProtKB/TrEMBL:B3KLW8" FT /protein_id="ACF07966.1" FT /translation="MDEETKDQSSTSTRVGATTDLPHDRITLARFREAFPRARWSDRLN FT AWFVPGRTAEKRISRWLAEMEAEADRFADEKGRDAFAFDPIESRYLEATPATLQIQTPY FT SRTVVNEIREIPPARWDADRRLWTVPYRSFDELRRRWPTIEAAAERSEPEARRARREAI FT KGTQQDEASKARMRERRRKRYPVPADDAPPSDRAIGTHVGVVFFLGTDGELADPATVTA FT FYFPAANSEEYVWASWRLGSLEELVTTWPARTPPNKHELERGWWIPDLGELRIARRDAQ FT SRRRARERKEKGECSR" FT gene 228306..228824 FT /locus_tag="SMa0421" FT CDS 228306..228824 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0421" FT /product="conserved hypothetical protein" FT /note="Similar to S; meliloti SMb21697" FT /db_xref="UniProtKB/TrEMBL:Q930H3" FT /protein_id="AAK64881.1" FT /translation="MLPVKDQQTALEEFRSLPPIAPRELVGLWKGHGIPTGHPFDGVLE FT NLSWFGKRFTPDMRVDALLFRSGDRRLVAIDPKWIPLRLALRFHEVGRMRVARNLFSYL FT QRGLRAKGPVASSKTMVFGGVESAAMVYDHQPIVDHFRRIHADRIMGAMTIRNDERIYF FT FELQRVDGP" FT gene 228821..229255 FT /locus_tag="SMa5021" FT CDS 228821..229255 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa5021" FT /product="hypothetical protein" FT /note="Very weak similarity, possibly spurious, to domain FT of unknown function, DUF768" FT /db_xref="UniProtKB/TrEMBL:B3KLW9" FT /protein_id="ACF07967.1" FT /translation="MKCAQPAIIYRSPPVSMIALPSSLSAAVVRVRQGAPRKGRAPCSF FT VSRVFLKLGGVILRTISVPKGSPRQEVQAMKPEQFLERWKSEHIDSGTQQSDATRLVED FT LLADAEKEGISRDMLVDAAGGGLVNYIVGAIKEAVEEELW" FT gene complement(229290..230330) FT /locus_tag="SMa0424" FT CDS complement(229290..230330) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0424" FT /product="ATP-dependent DNA ligase" FT /note="pfam01068, DNA_ligase_A_M, ATP dependent DNA ligase FT domain; This domain belongs to a more diverse superfamily, FT including pfam01331 and pfam01653; Similar to S; meliloti FT SMb20912, function unclear" FT /db_xref="GOA:Q930H2" FT /db_xref="InterPro:IPR014146" FT /db_xref="UniProtKB/TrEMBL:Q930H2" FT /protein_id="AAK64882.1" FT /translation="MSRRAKPLLQDDSVAKSKPARPRDPAQPNLPFDPMAERIEPCLAL FT LKPVPPKGPDWVFEVKWDGYRLAIHIEPKGVRIITRGGHDWTHRFPAIAEATSKLGVGT FT AILDGEAVVLDEEGRSDFGALQRSLGGRGGKRSSTESVFFAFDLLYFDGHDLSGTELSV FT RRHLLEGFLDGPTGAIQSSEEVFGDGALLEKACSMGLKGIIAKHRDWPYRSGRTGDWLK FT IKCLQSESFMIVGYEQSLTARGGLGSLLLAGRKGHDWIYVGSVGTGFNTKDAEYLRKTL FT DRLKTSKPAVPLKGKNLVFAQPTLIAEIEFRGWTHDGSLRHASYKGLREVQDNAAVFDM FT SERAIL" FT gene complement(230327..231133) FT /locus_tag="SMa0426" FT CDS complement(230327..231133) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0426" FT /product="conserved hypothetical protein" FT /note="Unknown function but contains a KU-like domain, FT cd00789; This CD represents prokaryotic homologs of the FT eukaryotic DNA binding protein Ku; The alignment includes FT the core domain shared by the prokaryotic Yko V-like FT proteins and the eukaryotic Ku70 and Ku80; The prokaryotic FT Ku homologs are predicted to form a homodimer; It is FT proposed that the Ku homologs are functionally associated FT with ATP-dependent DNA ligase and the eukaryotic-type FT primase, probably as components of a double-strand break FT repair system; Similar to SMb21407" FT /db_xref="GOA:Q930H1" FT /db_xref="InterPro:IPR009187" FT /db_xref="UniProtKB/TrEMBL:Q930H1" FT /protein_id="AAK64883.1" FT /translation="MALRPYWKGYLKLSLVTCPVQMMPATSESEKVRFHTLNRQTQNRV FT VSHYVDSVTGKEVKEEDEVKGYQRGEHEYVILEDEELENVALESTKTIDISTFTPRDSI FT EWIWLDTPYCLSPNDPVGQEAFSVIRDAMEAQNMVGISRLVISRRERAVMLEPRGKGIV FT LWTLRYGDEVRDEDSYFEAIGDEQADSEMMPLVQQLIKKQTKDWTPKMVADPVQERLLE FT IIAAKKKALKPQKAQGKTAPSSSPSNVVSIMDALRKSVAAEKRATK" FT gene complement(231427..232443) FT /locus_tag="SMa0429" FT CDS complement(231427..232443) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0429" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR000209" FT /db_xref="UniProtKB/TrEMBL:Q930H0" FT /protein_id="AAK64884.1" FT /translation="MADRFLALSKDDRREALAVAAARTGRPIHLLEKDVWVVWTLETLY FT SSKLGEHLVFKGGTSLSKAYGAIRRFSEDIDLTYDIRALAPDLVGDNDEALPKTRSEEK FT RWTSEVRKRLPVWVAESVEPVIAAAVRGQSLPARIRIEGDTLYLDYEAVSSGSGYVAPS FT VMLEFGARSTGEPASIRDVGCDAAGHVDGVEFPKASPRAMHAERTFWEKATAIHVFCLQ FT ERPRGDRFARHWHDVVRLDDAGFADKAFAERQLANAVAKHKSMFFAEKAADRSPIDYAA FT AGHLVLTPSGDGLRALSEDYAKMVDDGLLLGDSEPFEQLIERCALIQERANKVGTTE" FT gene complement(232436..233029) FT /locus_tag="SMa0431" FT CDS complement(232436..233029) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0431" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q930G9" FT /protein_id="AAK64885.1" FT /translation="MQNLTSQILGYAEQMPEGSPLSAKSLLHLGNRAAVDQALSRLTER FT GELIRAGRGIYMRPVKSRFGSRPPTVEQAVEAVAQQRGEIIVSSGAAAANALGLTTQVP FT VRSVYLTSGRSRTMNLGKQSVELKHVPRWQLALADRPAGVAVRALAWLGPEKAEEALSR FT IKRKLPPAEFGELVAAAPQFPTWLARSVGRAAHG" FT gene 233560..234030 FT /locus_tag="SMa0433" FT CDS 233560..234030 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0433" FT /product="hypothetical protein" FT /note="contains PAS domain and shares similarity with the FT N-terminal regions of a group of sensor kinases; Possible FT truncated protein" FT /db_xref="UniProtKB/TrEMBL:Q930G8" FT /protein_id="AAK64886.1" FT /translation="MTKVTVIAHSPGAPVSRRALLDAIRNQASWAGKTRLQLFAPAHIG FT AYLNKVRKELGIASRLIASLTALTKFGVLSLDGLEPGSPFLTQLMEDSSKELANGWDAQ FT VKARQVIFGDGENVVMVQRFLEDPPHTVWPGHGHCSVCRCDKTAPAIASYLA" FT gene complement(234248..234631) FT /locus_tag="SMa0436" FT CDS complement(234248..234631) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0436" FT /product="hypothetical protein" FT /note="contains a region with very weak similarity to a PAS FT domain" FT /db_xref="GOA:Q930G7" FT /db_xref="InterPro:IPR013767" FT /db_xref="UniProtKB/TrEMBL:Q930G7" FT /protein_id="AAK64887.1" FT /translation="MSTTPTVHFEAASTLAVVVSSHEPLLFLSDDLKIIAASASFCRAF FT DIDPTSVPGKKLGELGQGEWAMPKLESLLKATASRSADIQAYEIDLKRPNRGTRQLVVN FT AQTLDDGDVEHIRLLVAVTDMER" FT gene 236016..236381 FT /locus_tag="SMa5022" FT CDS 236016..236381 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa5022" FT /product="hypothetical protein" FT /note="Amino-terminus has similarity to conserved FT hypothetical proteins of COG5579; Carboxy-terminus has FT similarity to a short stretch of amino acids found in FT eukaryotic-type DNA primases" FT /db_xref="InterPro:IPR014937" FT /db_xref="UniProtKB/TrEMBL:B3KLX0" FT /protein_id="ACF07968.1" FT /translation="MAENDPFELSRLVAAQDLVFETVLAELRAGRKETRWMWFIFPQLR FT ALGRSPTANFYGIGSIEEARAYLPWTQVQSNLDPKRFTVRTVPALLAKAGAWEEYYDGQ FT RPHEQAIKRLGKHKAAA" FT gene 236378..236794 FT /locus_tag="SMa5023" FT CDS 236378..236794 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa5023" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:B3KLX1" FT /protein_id="ACF07969.1" FT /translation="MTFESPGGDHTKRMKKSNIPIEQLTRLRRIRGLARLMDTALRIPG FT TRMSLGADSVLGLIPGVGDFAAAAVSLIIVNEARRLGVPNDKLVKMLVNVGFDTVAGSV FT PVLGDVFDVYFKSNRRNLQLVLDHFGLDHADLDR" FT repeat_region complement(236849..238167) FT /rpt_family="ISRm1" FT /note="SMa3003; predicted by homology" FT gene complement(236878..237708) FT /locus_tag="SMa0444" FT CDS complement(236878..237708) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0444" FT /product="TRm1b transposase" FT /note="Family membership" FT /db_xref="GOA:Q930G4" FT /db_xref="InterPro:IPR001584" FT /db_xref="UniProtKB/TrEMBL:Q930G4" FT /protein_id="AAK64890.2" FT /translation="MKTVCETLGVARSNIAARAAGSPSRARGRPPLPDRELVEDIKAVI FT ADMPTYGYRRVHAILRRNARKLGRSWPNAKRVYRVMKLHNLLLVRHTGAVDDRLHEGQV FT AVERSNIRWCSDGFEIGCDNKEKVRVAFALDCCDREAIAHVATTEGIKSQDVQDLVITA FT VENRFGRINMLSEPIEWLTDNGSCFVARDTASLLRDIGMEPCTTPVRSPQSNGMAEAFV FT KTFKRDYVSVNPTPDAETVMAQLPFWFEHYNNLHPHSALGYQSPREFISSQSQT" FT gene complement(237705..238097) FT /locus_tag="SMa0445" FT CDS complement(237705..238097) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0445" FT /product="TRm1a transposase" FT /note="Family membership" FT /db_xref="GOA:Q52956" FT /db_xref="InterPro:IPR002514" FT /db_xref="UniProtKB/TrEMBL:Q52956" FT /protein_id="AAK64891.1" FT /translation="MTSSNFKMEVLSGPERRRRWSTAEKLAIIHETYEADATVSIVARR FT HGIQPNQLFAWRKLASQGALTATAAEEEVVPASEYRALQAQVKELQRLLGKKTMESEIL FT KEALEIAGSPKKHLLRSLSLPRGILG" FT gene 238528..239649 FT /locus_tag="SMa0447" FT CDS 238528..239649 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0447" FT /product="conserved hypothetical protein" FT /note="Contains pfam01594, UPF0118, Domain of unknown FT function DUF20; This transmembrane region is found in FT putative permeases and predicted transmembrane proteins it FT has no known function; It is not clear what source FT suggested that these proteins may be permeases and this FT information should be treated with caution, family FT membership" FT /db_xref="InterPro:IPR002549" FT /db_xref="UniProtKB/TrEMBL:Q930G3" FT /protein_id="AAK64892.1" FT /translation="MSMVTQGKLIGQLLAFGALGLLAIGCTLVLWPFLSAILWAAVICF FT STWPAYRLFERAVGGYRALAAAAMTVLVVVVIVAPLALLATTLADNISSLVAGVTHVLE FT QGPPAPPDWVRGLPIAGEGLATYWEGLAHNAPAFTIELKKVIGPFADVALIGGTLFGAG FT LLELALSIFIGFFLFLHGRRMTALTRQIAERVAGARARRLLSVVGVTVTGVVYGLIGTA FT LAQGLLAGVGFWIAGVPQALLLGCLTFVLSFVPAGPPFVWGPVALWLFMQESVWWGIFV FT AIWGLLLVSSIDNFLRPYLLGRNTNLPVLLGLFGLIGGVLAFGLIGLFLGPTLLAVAHS FT LFREWIAAELEERRQPPSSSTGRDQRSGPRQGG" FT gene complement(240025..240435) FT /locus_tag="SMa0448" FT CDS complement(240025..240435) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0448" FT /product="hypothetical protein" FT /note="Has similarity to the C-terminal regions of a group FT of conserved hypothetical proteins" FT /db_xref="UniProtKB/TrEMBL:Q930G2" FT /protein_id="AAK64893.1" FT /translation="MVGLLTGLELMAILGVGPVVAAGWLAATAAGAVAGAVAGGAAGGL FT IGALTDSGVDEEDAHVFAKGVRRGGTFVTARVDDTLAPEAQAILQDLNRVDPAARWGVF FT AQEEWTRFDENADPYTLEAVPLYDAVTASKDW" FT gene 240985..241272 FT /locus_tag="SMa0450" FT CDS 240985..241272 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0450" FT /product="hypothetical protein" FT /note="Similar to hypothetical protein SMa1797 of FT Sinorhizobium meliloti" FT /db_xref="UniProtKB/TrEMBL:Q930G1" FT /protein_id="AAK64894.1" FT /translation="MVTEMSSEKMRKLIQDYQRDIAAYLAPESGISERQLLQQLASRLD FT GQQAQDALGNGWQGWLPDDEDPAAADDGSPAPTRWWTEPEFFGTMWKLRS" FT gene 243155..243562 FT /locus_tag="SMa0453" FT CDS 243155..243562 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0453" FT /product="Yle homolog" FT /note="Similar to Yle of Agrobacterium tumefaciens; Yle of FT A; tumefaciens resembles plasmid stability locus and might FT have a role in Ti plasmid maintenance; Similar to COG1487, FT VapC, Predicted nucleic acid-binding protein, contains PIN FT domain, conserved hypothetical protein" FT /db_xref="InterPro:IPR002716" FT /db_xref="UniProtKB/TrEMBL:Q930F9" FT /protein_id="AAK64896.1" FT /translation="MYLVDTNIVSEARRGTPQAVSWLRSVDPLSIHLSALSLGEIMRGI FT ALKQRSDPKTAAHLTEWLRKLRHDHGDRILPITDQIAVEWGRIAAIRPRGDIDGLIAAT FT AIVHDLILVTRNVKDFEDTDASVINPWETSA" FT repeat_region 245057..246355 FT /rpt_family="ISRm3" FT /note="SMa3004; predicted by homology" FT gene 245116..246318 FT /locus_tag="SMa0461" FT CDS 245116..246318 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0461" FT /product="TRm3 transposase" FT /note="Elements of external origin; Transposon-related FT functions, high confidence in function and specificity" FT /db_xref="GOA:P80011" FT /db_xref="InterPro:IPR001207" FT /db_xref="UniProtKB/Swiss-Prot:P80011" FT /protein_id="AAK64898.1" FT /translation="MAIEKELLDQLLAGRDPSEVFGKDGLLDDLKKALSERILNAELDD FT HLDVERLEGGPANRRNGSSKKTVLTGTSKMTLTIPRDRAGTFDPKLIARYQRRFPDFDD FT KIISMYARGMTVREIQGHLEELYGIDVSPDLISAVTDTVLEAVGEWQNRPLELCYPLVF FT FDAIRVKIRDEGFVRNKAVYVALAVLADGSKEILGLWIEQTEGAKFWLRVMNELKNRGC FT QDILIAVVDGLKGFPEAITAVFPQTIVQTCIVHLIRHSLEFVSYKDRRTVVPALRAIYR FT ARDAEAGLKALEAFEEGYWGQKYPAIAQSWRRNWEHVVPFFAFPEGVRRIIYTTNAIEA FT LNSKLRRAVRSRGHFPGDEAAMKLLYLVLNNAAEQWKRAPREWVEAKTQFAVIFGERFF FT N" FT gene complement(246386..248227) FT /locus_tag="SMa0462" FT CDS complement(246386..248227) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0462" FT /product="conserved hypothetical protein" FT /note="has very weak, probably spurious similarity to FT eukaryotic peroxidases" FT /db_xref="GOA:Q930F7" FT /db_xref="InterPro:IPR019791" FT /db_xref="UniProtKB/TrEMBL:Q930F7" FT /protein_id="AAK64899.1" FT /translation="MVTKKKARAKQTPKRLDVMKATKNKAETANAAAFEIPEQAGKFLR FT DTSIPQGFANPQPIVLAELQKRVTEMNLRPTVSLEQFLASANRIKPVDLPIEELSDDVK FT ESIPALKPEIRRFHGVKIPLYWFPFPWLSSVCSDRFGYMSSAATRAATKLPFNVATQAL FT LGQLGNMMGDAGRDPNPASHNPADAGVSSLPAGFTYFAQFVDHDITFDVSSTLDADIDA FT NTVNNMRSPALDLDSLYGRGPGLDPFLYVFPTSGPATAIKLHRGTNTPVGPGGPSNNGN FT PSGMLQQTNWDVPRMQGTNTAVTGDPRNDENLIIVQFHHAMLRFHNAVVDLLLAAAFAG FT DIFAEAKRIVTHHYQWAVVHDFLERICGVATVNNAIASVSAPIGSSFRMPVEFAVAAYR FT FGHSMIRDTYWVNFNFPNATLGQVFEFNRIPRLPVFSNWVVDFNAFFDTGVPVPVHNKA FT RKIDSLMASGLESLPGFSGMMAILATRNLRRALALGLPSGQGMANSFGIAPMTAAQLIF FT GLPPAEVAVLNASGGLLLNKTPLWYYVLREAAVLAGGNQLGAVGGRIVAETFVRILKRD FT ASSYLNVAGGFTPILPSSTPGNFTVADLVAFVGVTQP" FT gene complement(248442..251618) FT /gene="cyaI2" FT /locus_tag="SMa0464" FT CDS complement(248442..251618) FT /codon_start=1 FT /transl_table=11 FT /gene="cyaI2" FT /locus_tag="SMa0464" FT /product="adenylate/guanylate cyclase" FT /function="Predicted ATPase" FT /EC_number="4.6.1.1" FT /note="Amino-terminus contains an adenylate/guanylate FT cyclase domain of the type found in family 3 adenylate FT cyclases; Also contains an approximately 750 amino acid FT domain found in ATPases, family membership" FT /db_xref="GOA:Q930F6" FT /db_xref="InterPro:IPR001054" FT /db_xref="UniProtKB/TrEMBL:Q930F6" FT /protein_id="AAK64900.1" FT /translation="MAVIRRPSRSLTPTEEIALARPEPPAEDVRKTITILIADIVDSSR FT LSLTLDPEALRELFARYFDEMTSTIQRHGGVVDRYVGDEILAVFGVPTLHEDDALRAVS FT AAVDMRDTLARLNHEFETGWGVQLAHRIGLNTGEVFTGIDRWGHRFLTGEAVRVAKRLQ FT EAAAANEILMGEATHKLVRHAVVVESSSPRAVKHGETFPAIIVLTVIARTTGFQRRFDT FT PFVGRKRQLAMISTLLGDFVSNRTCHLLTVLGEAGVGKSRLVSEVAGNLAREMTVAHGR FT CLPYGDGITYWLLADIVREIFRAGGGDSGKLSVAAIAEVLAGVDKAKLIAERIAGLLGF FT GAGDPGTREETFWAVRRLFEVFARERPVVIVVEDLHWADPTLLDFIEHLVDFSHGFPIM FT IVATARPELLDTRPGWGGGTPNATTIALEPLSEAESRDMVLNLLHRLPLSPAVELMITR FT AVGGNPLFAEELVAMLVDEELLRRNEDCWVAREDLSELPVPSTIIALLAARLEGLTSQE FT RAILTAAAVEGAVFHRSAVDELARPAPKALGDGLLSLVRRDLIRPEAPSFVGEETYRFR FT HDMIREAAYRSLPKNARADLHERFASWLEITAKERLREFEEVVGYHLEQAFQYRIALGP FT RGARAASLAARACERLEAAGRRALVRSDLSAAISLLERVSRLLLADDPRRIALLAELSG FT ALIESGRLDDAGRVLEEAGGLAGAAMDRRLAAHVRVQRQFLRLLHGEEGGLEKAAQAAA FT EVIPVFEGFGDDLGLCRARRLEAWLFFNGARGEAAAAAWERAAAHARRAGNLHEYYEIL FT TWIASSLWFGPTPAAEGIRRCEAMRAEVGESLESEAAILRQLACLNAVVGRFAIARELI FT AASNATYADLGLTLYVASSEHEAVVELLAGNPAAAERSARAAYRALEEMGERAFRSTMA FT ASLAVVILEQGRDEEAEDFAKLSAQLAASGDLVTQVRWRRVRARVLARRAEISAAEALA FT REALEIAEKTDFINDRADALVDLSHVLEASRRRDEAVAAATGAVHLYELKGNVVAAAAT FT RLRLGKLVAM" FT gene 252021..253625 FT /locus_tag="SMa0466" FT CDS 252021..253625 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0466" FT /product="ABC transporter, periplasmic solute-binding FT protein" FT /note="best similarity to bacterial extracellular solute- FT binding proteins, family, family membership" FT /db_xref="GOA:Q930F5" FT /db_xref="InterPro:IPR017909" FT /db_xref="UniProtKB/TrEMBL:Q930F5" FT /protein_id="AAK64901.1" FT /translation="MAIEFTRRSILAAGMAHAAFVSVTGTFVIARAAKAAEQIELVTWA FT LPSIPDTLFIPHAWTTYTGAIMSLVQEGLLGFGEDLGLETALADRWEEVDPTTIKYHLR FT GGVKFGDGSPLAADDIVATFKYHMSPDSPSQLASFYNSVATVEATAPDEVTVKLKAPNV FT QFAFTPAHMAGFVFKKEQLADKNIGTPEALPLGTGAYKLVEFVPTDRVILEARDDYSGP FT KPAVKRITFKAIPDRPARLLAMQQGEIDGTFDLAISDIDQWKALGNVDVVAAPSLGVYL FT LTLDHSAPPFDDIHVRRAVAYSVDRNGLVQALLKGNGEAATALNPPEIWSGVLPPDEVR FT AFYATLLPNYAFDLNKAKAELAQSNHPDGFDVTIPASTADPYMVNILQSVTENLKQIGI FT RAHIQESDNNTWFTNYVTHDKLGMQIMAYYPDFADAANYPSLFFSSANAEKGGMNGSNF FT NNREVDAKLKIANENADPKARADALKKVFTIANEEVAVVPIFWPASAMAINNKYKLTGY FT NAFWYSIPWAMRGFGPK" FT gene 253863..254879 FT /locus_tag="SMa0467" FT CDS 253863..254879 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0467" FT /product="ABC transporter, permease" FT /note="Most similar to DppB, ABC-type FT dipeptide/oligopeptide/nickel transport systems, permease FT components, family membership" FT /db_xref="GOA:Q930F4" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:Q930F4" FT /protein_id="AAK64902.1" FT /translation="MHRAAPSTGLTAISGGANGGSSLVVFITRRFAVTIPLLLIISFGV FT FALIHIAPGDPVSSLLGARASDPATLAAIRARYHLDDSLLVQYGTWLSQVIRGDLGVSI FT LGNRSVTSTIADRLGVTIFLSLMSTTLVLGLGILLGALAAFRRGTGLDRTVVMFSVFGI FT SSPAFVTGIFFLYVFGVLLHWFPTFGAGTGFLDRAWHLALPALALAASTMAIVVKITRA FT AVIEELARDYVTFARARGVSSRRILLAYVLRNSLIPVITAAGLIVIGILAGAIYVEVTF FT SLPGLGALMIDAVQKRDIPTIQGITLLFSAFVVLVNLAVDVIYTLIDPRIRFGRVGS" FT gene 254921..255718 FT /locus_tag="SMa0469" FT CDS 254921..255718 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0469" FT /product="ABC transporter, permease" FT /note="best similarity to peptide and nickel transporters, FT family membership" FT /db_xref="GOA:Q930F3" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:Q930F3" FT /protein_id="AAK64903.2" FT /translation="MPVPVVVLFAALIIAAVVICAVLGERIAPDSPFLQRLGVGDTPPS FT QDHIAGTDLLGRDVLSRVIYGARTALAGPVVVAAGAFAISTLLGLLSGYLGGLVDSAIM FT RWVDFMFALPGPLVAIVVVGVVGGGYWTAVLVLVVLFTAPDTRIVRSAVLEQRPLAYID FT AARTLGISKTRILFVHILPNIAPIILAYVVLDFAFALVNLAGLSFLGLGVEPGTPDWGR FT MLFENRTILFSNPAALLLPAGMIILTAVSMNLVGDWLFERFSK" FT gene 255727..257562 FT /locus_tag="SMa0470" FT CDS 255727..257562 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0470" FT /product="ABC transporter, ATP-binding protein" FT /note="ATPase components of various ABC-type transport FT systems, contain duplicated ATPase domains; The two domains FT are very similar to those of the NikE/OppD family of FT transporters, but in this case the domains are duplicated FT within one protein, rather than being encoded by separate FT genes, family membership" FT /db_xref="GOA:Q930F2" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q930F2" FT /protein_id="AAK64904.2" FT /translation="MAREGQESPLLKVEGLAISHGDVPITLPLEIVVERGETIAIVGES FT GSGKSLTARAIVGILPPGINAKGAVTLDGVPLMRLAERELRTIRGSRVSMLMQDPFTML FT NPLMRSGDHIDEMLRDRPEFASRAVRADEVKRRLAEVGIVDEDVARRMPFQLSGGMCQR FT VALAAALARDPELLIADEPSTALDVTTQAEIIKLLRRIQRERNMAVILITHNLRLAFST FT CQRIYVLYAGSMLEVGDAAAVERQPFHPYTLGLLLSEPPVDIRVPRLVAIRGSVPRAAD FT VIDSCGFADRCEWAKQICRAGKPSLAARDASRFTACIRQDEIQGELDALRSATLSATPE FT TPRRGGTAGALVHVDALVKTFAGRRGRPICAIRDVSLHIMAGESVGLVGESGSGKTTIG FT RCLVGLETPTDGDIRINGIAAADFGAMAKADRDRVRRTIQMIFQDPYSTLNPKHSVGQA FT LREALGASAGAPSPAPQERIASLLAEVGLSAAYATRRPASLSGGERQRVAIARALAVKP FT AILVCDEPVSALDVSVQAQVLNLFRRLQVEHELSYLFITHDLAVVRQIAERIYVLYLGE FT IVEEGPTERVISNPQHPYTRRLIESIVRSAIQRAP" FT gene 258225..258533 FT /locus_tag="SMa0471" FT CDS 258225..258533 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0471" FT /product="conserved hypothetical protein" FT /note="Has similarity to pfam04221, RelB antitoxin, but is FT missing about one third of the RelB domain; RelE and RelB FT form a toxin-antitoxin system; RelE represses translation, FT probably through binding ribosomes (,); RelB stably binds FT RelE, presumably deactivating it" FT /db_xref="InterPro:IPR007337" FT /db_xref="UniProtKB/TrEMBL:Q930F1" FT /protein_id="AAK64905.1" FT /translation="MASNALVQTRIDAEVKERATAVLENMGLTVSDAVRILLTRTANEG FT ALPLELFSHSEAHDAWFRAKVLRALEDTRPDVDDADADAHFRERRAAALRKAAAGDR" FT gene 258530..258823 FT /locus_tag="SMa0473" FT CDS 258530..258823 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0473" FT /product="conserved hypothetical protein" FT /note="Has similarity to ParE, Plasmid stabilization system FT protein; Also has similarity to proteins annotated as FT 'Addiction module toxin, RelE/StbE' but the significance of FT this is unknown" FT /db_xref="InterPro:IPR012753" FT /db_xref="UniProtKB/TrEMBL:Q930F0" FT /protein_id="AAK64906.1" FT /translation="MRLVWARYALDDRDTIFSYIERENPRAAVHVDEEIVSAVRRLLDF FT PESGRPGRIAGTRELVIPRTPYIAAYMVMEDRIRILRVLHGAQKWPSELDDG" FT repeat_region 258869..260541 FT /rpt_family="ISRm17" FT /note="SMa4001; predicted by homology" FT gene 259012..259911 FT /locus_tag="SMa0475" FT CDS 259012..259911 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0475" FT /product="TRm17a transposase" FT /note="Similar to IS5 family transposases, high confidence FT in function and specificity" FT /db_xref="UniProtKB/TrEMBL:Q930E9" FT /protein_id="AAK64907.1" FT /translation="MRQERTVQGSIFDLFAEHEIGRELEAMSQWLDAHRDLLNLVTSDL FT RRQGVTETGRQGLPSEAVLRCALLKQYRQLSYEELAFHLEDSASFRAFARLPWGWSPKK FT SVLHKTISAIRADTWEAVNKMLLASARQERLESGRVVRVDSTVTAALIHEPSDSSLLWD FT CVRVMVRLLQQADSLGSTIPWHDHCRAAKKRARVIEYTRGRPKRVQHYRALLRIARNTL FT DYLQQAAAQLPLAAGPAGKLWQAQVRHYQPLITQIIAQTERRVLAGEAVPAGEKLVSLF FT EPHADIIVKGSRERRLRT" FT gene 259996..260349 FT /locus_tag="SMa0476" FT CDS 259996..260349 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0476" FT /product="TRm17b transposase" FT /note="Similar to IS5 family transposases, high confidence FT in function and specificity" FT /db_xref="UniProtKB/TrEMBL:Q930E8" FT /protein_id="AAK64908.1" FT /translation="MPLLERHIAFYGEAPRQAAADGGYASRENLRQAKAWGVRDMAFHK FT KSGLRIEDMVRSRWVYRKLRNFRAGIEAGISCLKRTYGLARCTWRGLDHFKTYVWSSVV FT AYNLALFARLRPT" FT gene complement(260764..261969) FT /locus_tag="SMa0478" FT CDS complement(260764..261969) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0478" FT /product="Dehydrogenase, NAD-dependent" FT /note="Similar to formate dehydrogenase and D-isomer FT specific 2-hydroxyacid dehydrogenases, family membership" FT /db_xref="GOA:Q930E7" FT /db_xref="HSSP:2NAD" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q930E7" FT /protein_id="AAK64909.1" FT /translation="MEMAKVACVLYDDPVDGYPTAYARDGLPTLERYPGGQTLPTPKAI FT DFEPGALLGSVSGELGLRKFLEGQGHTLVVTSDKDGPDSVFERELVDAEIVISQPFWPA FT YLTAERIVKAARLKLAITAGIGSDHVDLQAAIDRGITVAEVTYCNSISVSEHVVMMILS FT LARNYIPSYQWVVKGGWNVADCVARSYDIEGMDIGTVGAGRIGTAVLRRLKPFDVKLHY FT TDRHRLPDEVAKELGVTFHQTAAEMVPVCDVVTINAPLHPETENLFNEAMIGKMKRGAY FT LVNTARGKICNRDAVARALESGQLAGYAGDVWFPQPAPKDHPWRSMPHHGMTPHISGSS FT LSAQARYAAGTREILECWFEGRPIREEYLIVSGGKLAGAGAHSYSAGDATRGSEEAAHF FT KT" FT gene 262378..262674 FT /locus_tag="SMa5024" FT CDS 262378..262674 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa5024" FT /product="hypothetical protein" FT /note="Has similarity to the central region of a group of FT conserved hypothetical proteins, including S; meliloti FT SMa2147, which contain a region with weak similarity to FT ParB-like nuclease domain" FT /db_xref="InterPro:IPR011111" FT /db_xref="UniProtKB/TrEMBL:B3KLX2" FT /protein_id="ACF07970.1" FT /translation="MVFADTRSAGTWYLLDGHLRLEALKELGFAKVECLVATDDDTYTY FT NKRVNRLAPIEEHRMIARAIERGVSSADIADAWGFRWSPSFAGSVCWKASAPR" FT gene complement(263506..264432) FT /locus_tag="SMa0483" FT CDS complement(263506..264432) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0483" FT /product="Phosphatase" FT /note="Similar to cd01641, Bacterial_IMPase_like_1, FT Predominantly bacterial family of Mg++ dependent FT phosphatases, related to inositol monophosphatases; These FT enzymes may dephosphorylate fructose-1,6-bisphosphate, FT inositol monophospate, 3'-phosphoadenosine-5'-phosphate, or FT similar substrates; This predicted protein is longer than FT other bacterial phosphatases, family membership" FT /db_xref="GOA:Q930E4" FT /db_xref="InterPro:IPR017955" FT /db_xref="UniProtKB/TrEMBL:Q930E4" FT /protein_id="AAK64912.1" FT /translation="MPPMQFLRARRSPADNRLSIGIAIPTCRRWTCSPAGGTVPPTTIK FT GVQNSMFDPPLGEFASFAHDIADLARQTISSAAGVRREPIAKSDASPVTETDRAVEKCL FT RERIADHFPDHGVLGEEFGAEGLGNEFVWVIDPIDGTKAFVAGLPVYGTLISLTRGGTP FT ILGLIDNPMTGDRWLGVSGQPTTLNNVPIRTASTTALATAFIANGNPDAFSPADKSRVE FT SLRRITRWCVYGGSCIAYGRVADGSVDISIDGGLDPYDYCALVPVITGAGGCITDWQGR FT PLTLNSGGLCVATATDLLHRHVLEILA" FT gene complement(264485..265939) FT /gene="thrC2" FT /locus_tag="SMa0485" FT CDS complement(264485..265939) FT /codon_start=1 FT /transl_table=11 FT /gene="thrC2" FT /locus_tag="SMa0485" FT /product="ThrC2 threonine synthase" FT /function="Threonine synthase" FT /EC_number="4.2.3.1" FT /note="CATALYTIC ACTIVITY: O-phospho-L-homoserine + H(2)O = FT L-threonine + phosphate, COFACTOR: Pyridoxal phosphate, FT PATHWAY: Threonine biosynthesis, SIMILARITY: Belongs to the FT serine/threonine dehydratase family, high confidence in FT function and specificity" FT /db_xref="GOA:Q930E3" FT /db_xref="HSSP:1KL7" FT /db_xref="InterPro:IPR004450" FT /db_xref="UniProtKB/TrEMBL:Q930E3" FT /protein_id="AAK64913.1" FT /translation="MIKYVSTTGGIEPVGFDEAVLQGFAADGGLFVPDRIPVIDQEQLQ FT AFSTLSFQDLAFELVSLYIDASIIPRQDLRRLIDNSYREFQRPDIVNLVPIRGNRDTYV FT LELFHGPTQSFKDMAMGFLMQVVDYLLGQRRERLNIVLATTGDTGPAAAWAAAGKQRID FT CWPLYPRGMISREQERQMTTLRADNVHPVGVENCPDGGDDLDLVVAELFSDEKLKRTLA FT LSSVNSINWCRVMTQTVHYFYSYYRAVERVGDPVVFSVPSGAFGNLFAGYLARSMGLPV FT ARFVCANNVNNALHTAFSRGVLPRHDLVQTPSSAIDIVAPYNFWRLLYFATNRDTARIR FT QWMKDFAARREVVLDVETTKTIQGGFISASISDEETLATVRSVYEAEGHYLIDPHTAVA FT VAAVEAVRDSLPAAAAIVCFATAHPAKFPDVIKRALDVEELPAAGHHPVIDEARDACEH FT LRICQLENLRSNLIGEMTRQVARRRG" FT gene complement(266004..266954) FT /locus_tag="SMa0486" FT CDS complement(266004..266954) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0486" FT /product="putative cyclodeaminase" FT /note="This family contains the bacterial Ornithine FT cyclodeaminase enzyme, which catalyses the deamination of FT ornithine to proline; This family also contains FT mu-Crystallin the major component of the eye lens in FT several Australian marsupials, mRNA for this protein has FT also been found in human retina, function unclear" FT /db_xref="GOA:Q930E2" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q930E2" FT /protein_id="AAK64914.1" FT /translation="MTKVFGIEEIRAATASMDLTSVMEAGFVAYSDGKVVVPPVGELLF FT EEPPGDTHIKYGYIRDDRVFVIKIASGFYGNAALGLPSSSGLMLVFSQKTGFLESVLLD FT EGYLTNVRTALAGRIAARYLAPKEVKAIGVFGTGTMARMQVTYLSTETDCQNIVAWGRS FT DDSLRRYCDDMAALGYHVTTTRDAREVAEACNLIIMTTPSTKPLLMASQLQPGTHITAM FT GSDTPEKQELDSLILARADIVVADSLEQCLSRGEIFHAVRAGHIAAAQVRELGGQIRAG FT TRVRTSQDQITVADLTGVAVQDIQIAKAVCERLSS" FT gene complement(267102..267869) FT /locus_tag="SMa0489" FT CDS complement(267102..267869) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0489" FT /product="ABC transporter, ATP-binding protein" FT /note="cd03262, ABC_HisP_GlnQ_permeases, HisP and GlnQ are FT the ATP-binding components of the bacterial periplasmic FT histidine and glutamine permeases, repectively; Histidine FT permease is a multisubunit complex containing the HisQ and FT HisM integral membrane subunits and two copies of HisP; FT HisP has properties intermediate between those of integral FT and peripheral membrane proteins and is accessible from FT both sides of the membrane, presumably by its interaction FT with HisQ and HisM; The two HisP subunits form a homodimer FT within the complex; The domain structure of the amino acid FT uptake systems is typical for prokaryote extracellular FT solute binding protein-dependent uptake systems; All of the FT amino acid uptake systems also have at least one and in a FT few cases two extracellular solute binding proteins located FT in the periplasm of Gram-negative bacteria or attached to FT the cell membrane of Gram-positive bacteria, family FT membership" FT /db_xref="GOA:Q930E1" FT /db_xref="HSSP:1B0U" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q930E1" FT /protein_id="AAK64915.1" FT /translation="MIEATFMNKPNDTMIQLIGVGKRFGQFEALKQVSLEVRRGEKIVL FT CGPSGSGKSTLIRCINRMEEHTSGRIIIDGRELTDRTKDINAVRREVGMVFQSFNLFPH FT MTILKNLTIAQRLVRKTPEKEAKEVAMHYLKRVKIPEQASKYPVQLSGGQQQRVAIARA FT LCMKPQIMLFDEPTSALDPEMISEVLDVMVDLARDGMTMICVTHEMGFARSVADRVMFM FT DGGQLIEEGDPETFFANPRNERTALFLRQILRH" FT gene complement(267881..268564) FT /locus_tag="SMa0492" FT CDS complement(267881..268564) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0492" FT /product="ABC transporter, permease" FT /note="Binding-protein-dependent transport systems inner FT membrane component, His/Glu/Gln/Arg/opine family, family FT membership" FT /db_xref="GOA:Q930E0" FT /db_xref="InterPro:IPR010065" FT /db_xref="UniProtKB/TrEMBL:Q930E0" FT /protein_id="AAK64916.1" FT /translation="MNIGIVFDAIPRMLGGIVMTFQLLLLSLAIGTMIAVLLLLMRISG FT RWWLSWPAQFYTYVFRGTPILVQIFIVYYGLPQFEWIRESIFWPILRDPFGCAILALSL FT NTGAYLSEIFRGGVLAVERGLLEAGAALGMSATHRFIYITTPLAIRIALPAYGNEVISL FT MKSTALASTITLVDMTGIGRTIVAETFAPYQVFLSLAIVYVAITWIIQRSVKRLEVYLG FT RSTAR" FT gene complement(268561..269259) FT /locus_tag="SMa0493" FT CDS complement(268561..269259) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0493" FT /product="ABC transporter, permease" FT /note="Best similarity to a component of the octopine FT active transport system probably consisting of four FT subunits: Q, M, P and T and to the binding-protein- FT dependent transport system permease family; HisMQ FT subfamily, SUBCELLULAR LOCATION: Integral membrane protein; FT Inner membrane (By similarity), family membership" FT /db_xref="GOA:Q930D9" FT /db_xref="InterPro:IPR010065" FT /db_xref="UniProtKB/TrEMBL:Q930D9" FT /protein_id="AAK64917.1" FT /translation="MEALNGWWDDYLLASVTVAKVFVCSLILMVIFGLLGASAKLSSNR FT LANAVGNAYTVFFRGTPEILVILLLYFGSAVSLTTIARVFDPSVAFVDIPPFWAGSIAI FT ALVVGSYATETFRGAFNGVKSGSIEAARALGMNGLQTFFYIRIPEMWRIALPPFGNHML FT SLIKDTALISIIGLNETLFVAKQAASTTGKPFTMYIVVGLIYLGFSTAITISVLLLEAL FT ANRHIQRRPS" FT gene complement(269299..270117) FT /locus_tag="SMa0495" FT CDS complement(269299..270117) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0495" FT /product="ABC transporter, periplasmic solute-binding FT protein" FT /note="Belongs to pfam00497, SBP_bac_3, Bacterial FT extracellular solute-binding proteins, family 3, family FT membership" FT /db_xref="GOA:Q930D8" FT /db_xref="HSSP:1FTK" FT /db_xref="InterPro:IPR001638" FT /db_xref="UniProtKB/TrEMBL:Q930D8" FT /protein_id="AAK64918.1" FT /translation="MNAMKNWQTSLTGLITAVLLSAAPANADTLRVGMECTYAPFNYRT FT SDGKLEGYDVDVAKGISEIIGVDFEYVCQEWDGMIPALLANKFDLIIASMSITDKRKEQ FT IDFSSPYRNSVGRIVGPVGKDLKLFDDKGQPVVGNFDGLRIGVERASTYFEWFSAKLPK FT ADLVLYDSNEAMYLDLKNGRVDVIMTNPMKAHLSFLSGEGKGKYEFIGPEVNEPKFFGP FT GVGVGLRKGNDELRDKISAAIRKLIREGKLKEYALKIFPFQIHDDAWAEE" FT gene 270311..270979 FT /locus_tag="SMa0496" FT CDS 270311..270979 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0496" FT /product="conserved hypothetical protein" FT /note="Uncharacterized protein conserved in bacteria" FT /db_xref="InterPro:IPR013559" FT /db_xref="UniProtKB/TrEMBL:Q930D7" FT /protein_id="AAK64919.1" FT /translation="MKKKDQELGKGIGPELSPFVPVCDAIANLFAPFAEVVLHDMASAS FT VVYIAGNFSKREFGDPSNLEEIDFKPADVLIGPYEKTNWDGRRIKSISSVLRTASGKEV FT GVLCINVDVSVFENILLTLQTFVSLPATAGKLDSLFRDDWFERINSYIRHWTTSRGLNI FT SDLSRAQKKELVQALADDGAFSGKNAAGYICRLLGMGRATVYNYLNGDAAKVAGGNSKQ FT " FT gene complement(271057..271956) FT /locus_tag="SMa0498" FT CDS complement(271057..271956) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0498" FT /product="Transcriptional regulator, LysR family" FT /note="Contains LysR-type HTH domain and substrate-binding FT domain, family membership" FT /db_xref="GOA:Q930D6" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q930D6" FT /protein_id="AAK64920.1" FT /translation="MTLSFSALESFYWVSQLRSFNAAANKLNVSQPTVSYRIRELEERL FT GVSLFVRQRRQLVLTSEGEALKHYAESMIAIARDIESNIKTRNTRLPTLRVGVIDSFAA FT VCLPSLLDELDIRFAGARIAATVDTSHKLADQLSEGLLDIAVLSTPPSHDNVALELLGR FT QSVDWIASHKLGLPQTIVSDEELLRQRIFATPAPSNLHSLTTGFLAATAGAGLRLNVCN FT SLGTILNLVESGTGISILPSRLLQEQIRHGTIQVLKTRTTLPLQEVFIGTNKGAIVRAL FT PQVSQMIRKVSASVGFCV" FT gene 272059..272691 FT /locus_tag="SMa0499" FT CDS 272059..272691 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0499" FT /product="hypothetical protein" FT /note="Has partial similarity (is missing about the first FT 65 amino acids) to COG3481, Predicted HD-superfamily FT hydrolase" FT /db_xref="GOA:Q930D5" FT /db_xref="InterPro:IPR003607" FT /db_xref="UniProtKB/TrEMBL:Q930D5" FT /protein_id="AAK64921.1" FT /translation="MHKTISREHILEDLPEIAEIQSDDLREKVVDAWVFALERSSFDRV FT VDIPGEGSPNVFALKRGTQDAHLRGVTRLALAIYDEFARTYPEARVDRDIILAGGLCHD FT IGKTWEFDPINLKRWRERGDRYGEPSFRHSAYGTHVCLSVGLPEEIGHICMGHSLEGAH FT IGHSTECYIIRQADHAWWHVAAALDLCHPETIGFAGPNLRVRPIGMQ" FT gene 272734..273420 FT /locus_tag="SMa0501" FT CDS 272734..273420 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0501" FT /product="ABC transporter, permease" FT /note="Most similar to HisM, ABC-type amino acid transport FT system, permease component, family membership" FT /db_xref="GOA:Q930D4" FT /db_xref="InterPro:IPR010065" FT /db_xref="UniProtKB/TrEMBL:Q930D4" FT /protein_id="AAK64922.1" FT /translation="MDYTFQFGPLLNYLPQIVSGLWLTIGLSFVGIFGGIALGIFCAVM FT STLSSPIPRLLVRLYVEVVRNTPLLVQIFVIFFGLPNIGIRLSPLTSVFIALVLNNGGY FT VAEIVRGGIEATHRSQVEAAESLGLSYFQTLRYVILPPALEKVFTPVVSQCVLLMLSTS FT LVSAIGVEDLTGAAMIASSETFRTMEIYLVVAMVYVVLNFVFRAVLNVAGLMIFTRSRR FT RLLGRA" FT gene 273422..274078 FT /locus_tag="SMa0503" FT CDS 273422..274078 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0503" FT /product="ABC transporter, permease" FT /note="Binding-protein-dependent transport system inner FT membrane component, His/Glu/Gln/Arg/opine family, family FT membership" FT /db_xref="GOA:Q930D3" FT /db_xref="InterPro:IPR010065" FT /db_xref="UniProtKB/TrEMBL:Q930D3" FT /protein_id="AAK64923.1" FT /translation="MRTFGSPEFLFIVYALRWTLTLTVLAFVGGGIMGIVLALLRIARI FT RAFSAITTFYMQVIQGLPLLVLLFLCYYAPSLFGIEIAALTAAAIALTINSSAFLGAIW FT ESALRAIPKAQWESADALALTPYKTLRFVIAPQAIRLALPSTVGFLVQIIKQTSLASII FT GFIEITRAGQLVSNATFEPLKAFLSVAALYFAVCFPLTQLSLWLERRTACRGART" FT gene 274136..274933 FT /locus_tag="SMa0506" FT CDS 274136..274933 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0506" FT /product="ABC transporter, periplasmic solute-binding FT protein" FT /note="Belongs to pfam00497, SBP_bac_3, Bacterial FT extracellular solute-binding proteins, family 3, family FT membership" FT /db_xref="GOA:Q930D2" FT /db_xref="InterPro:IPR018313" FT /db_xref="UniProtKB/TrEMBL:Q930D2" FT /protein_id="AAK64924.1" FT /translation="MTMRLKSLLLPLVGLLAITVGAATASASSLDDIIARKKVMIGVDL FT SVPPFGITNEEMQPDGLDVDVAKLLAKDLGVELELVPVTGQSRIPSLQTGKVDFVVASF FT GIYTERALSVAFSNPYGGHRSIIIAPKEATIKSLADLAGKRVGVPRGTAHEKILSAANV FT EGMELVRFDDDSTTLNALVSGQVDAIGTVNYIAAQLQERYPDRGFEEKTTYLQSFYGVG FT LRRNDPDLLHWLNTVLFVHKQSGELGAIYEKWMKTPIPELPSF" FT gene 274983..275714 FT /locus_tag="SMa0508" FT CDS 274983..275714 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0508" FT /product="ABC transporter, ATP-binding protein" FT /note="cd03262, ABC_HisP_GlnQ_permeases, HisP and GlnQ are FT the ATP-binding components of the bacterial periplasmic FT histidine and glutamine permeases, repectively; Histidine FT permease is a multisubunit complex containing the HisQ and FT HisM integral membrane subunits and two copies of HisP; FT HisP has properties intermediate between those of integral FT and peripheral membrane proteins and is accessible from FT both sides of the membrane, presumably by its interaction FT with HisQ and HisM; The two HisP subunits form a homodimer FT within the complex; The domain structure of the amino acid FT uptake systems is typical for prokaryote extracellular FT solute binding protein-dependent uptake systems; All of the FT amino acid uptake systems also have at least one and in a FT few cases two extracellular solute binding proteins located FT in the periplasm of Gram-negative bacteria or attached to FT the cell membrane of Gram-positive bacteria, family FT membership" FT /db_xref="GOA:Q930D1" FT /db_xref="HSSP:1B0U" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q930D1" FT /protein_id="AAK64925.1" FT /translation="MSVVVAKNIRKSFGGLQVLKGVSLTVEGGEVVALIGGSGSGKSTF FT LRCLNGLESVDSGEIEVAGHRMSRKPAELRRLRRDVGIVFQSYNLFPHLTAGENIMLAP FT VQVKGIGKDAARSEAKRCLSLVGLGDRFEAYPDMLSGGQQQRVAIARSLAMQPKVLLFD FT EVTSALDPELTGEVLAVIEKLARDGMTMILVTHEMGFARRVANRTIFMRDGIIHEEGPS FT AEFFSSPKTPELRAFLHAEVG" FT gene 275787..276734 FT /locus_tag="SMa0510" FT CDS 275787..276734 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0510" FT /product="putative D-isomer specific 2-hydroxyacid FT dehydrogenase" FT /note="Belongs to the D-isomer specific 2-hydroxyacid FT dehydrogenase family; Pfam PF00389, family membership" FT /db_xref="GOA:Q930D0" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q930D0" FT /protein_id="AAK64926.1" FT /translation="MPKIELLQVGPYPSWDEERLNANFTMHRYFEAADKAAFLAEHGAA FT IRGIATRGELGANWAMIEALPRLEIISVYGVGYDAVDLAAARERGIRVTNTPDVLTKDV FT ADLGVAMMLAHARGMIGGETWVKSGDWAKKGLYPLKRRVHGKRAGVLGLGRIGFEVAKR FT LAGFDMEIAYSDTGAKDFARDWSFIADPVELAARSDFLFVTLAASAETRHIVGRRVIEA FT LGPDGMLINISRASNIDEEALLDALESKVLGAAALDVFEGEPNLNPRFLALDNVLLQPH FT MASGTAETRKAMGQLVFDNLSAHFGGRPLPTPVL" FT gene 276745..277776 FT /gene="idnD" FT /locus_tag="SMa0512" FT CDS 276745..277776 FT /codon_start=1 FT /transl_table=11 FT /gene="idnD" FT /locus_tag="SMa0512" FT /product="IdnD L-idonate 5-dehydrogenase" FT /note="pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase, FT high confidence in function and specificity" FT /db_xref="GOA:Q930C9" FT /db_xref="HSSP:1PL7" FT /db_xref="InterPro:IPR013154" FT /db_xref="UniProtKB/TrEMBL:Q930C9" FT /protein_id="AAK64927.1" FT /translation="MKAIVIHTAKDLRVEECAVEKPGPGEVEIRLAAGGICGSDLHYYN FT HGGFGTVRLKEPMILGHEVSGHVAALGEGVSDLAIGDLVAVSPSRPCGACDYCLKGLPN FT HCFHMRFYGSAMPFPHIQGAFRERLVAKASQCVKAEGLSAGEAAMAEPLSVTLHATRRA FT GEMLGKRVLVTGCGPIGTLSILAARRAGAAEIVAADLSERALGFARAVGADRTVNLSED FT RDGLVPFSENKGTFDVLYECSGAQPALVAGIQALRPRGVIVQLGLGGDMALPMMAITAK FT ELDLRGSFRFHEEFATAVKLMQGGLIDVKPLITHTLPLGEALKAFEIASDKGQSMKTQI FT AFA" FT gene 277846..278601 FT /gene="idnO1" FT /locus_tag="SMa0513" FT CDS 277846..278601 FT /codon_start=1 FT /transl_table=11 FT /gene="idnO1" FT /locus_tag="SMa0513" FT /product="IdnO1 gluconate 5-dehydrogenase" FT /function="Dehydrogenases with different specificities FT (related to short-chain alcohol dehydrogenases)" FT /EC_number="1.1.1.69" FT /note="FUNCTION: Involved in the nonphosphorylative, FT ketogenic oxidation of glucose and oxidizes gluconate to 5- FT ketogluconate; Dependent on NADP, almost inactive with NAD, FT CATALYTIC ACTIVITY: D-gluconate + NAD(P)(+) = 5- dehydro-D- FT gluconate + NAD(P)H, SUBUNIT: Homodimer, SUBCELLULAR FT LOCATION: Cytoplasmic, SIMILARITY: Belongs to the FT short-chain dehydrogenases/reductases (SDR) family.enase, FT high confidence in function and specificity" FT /db_xref="GOA:Q930C8" FT /db_xref="HSSP:1Q7B" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q930C8" FT /protein_id="AAK64928.1" FT /translation="MSTELFDLTGKRALVTGSSQGIGYALAKGLAATGAEIILNGRDAA FT KLAAAARDLGAGHTLAFDATDHQAVRKAVDAFEADVGAIDILVNNAGMQHRTPLEDFPA FT DAFERLLKTNVSSVFNVGQAVARHMIKRGAGKIINIASVQTALARPGIAPYTATKGAVG FT NLTKGMATDWARYGLQCNAIAPGYFDTPLNAALVADPSFSDWLERRTPAGRWGKVEELV FT GACIFLSSDASSFVNGHVLYVDGGITASL" FT gene 278603..279121 FT /gene="idnK" FT /locus_tag="SMa0514" FT CDS 278603..279121 FT /codon_start=1 FT /transl_table=11 FT /gene="idnK" FT /locus_tag="SMa0514" FT /product="IdnK gluconate kinase IdnK" FT /EC_number="2.7.1.12" FT /note="Gluconate kinase catalyzes the phosphoryl transfer FT from ATP to gluconate; The resulting product gluconate-6- FT phoshate is an important precursor of gluconate metabolism; FT GntK acts as a dimmer composed of two identical subunits, FT high confidence in function and specificity" FT /db_xref="GOA:Q930C7" FT /db_xref="HSSP:1KO1" FT /db_xref="InterPro:IPR006001" FT /db_xref="UniProtKB/TrEMBL:Q930C7" FT /protein_id="AAK64929.1" FT /translation="MAPHSARRGIVLMGVAGCGKSAIGAALATRLGATYVDGDDLHPPE FT NIARMSRGEPLTDDDRWPWLTLVGRRLAAPDGVLIIGCSALKRRYRDHIRNEAGAPVTF FT VHLSGTKVLITARMGARAGHFMPVSLIESQFAALEPPTTDENVITVDIDQPLEVLVDEI FT AVKLEETPS" FT gene 279118..280005 FT /locus_tag="SMa0516" FT CDS 279118..280005 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0516" FT /product="dehydrogenase" FT /note="best similarity to 3-hydroxyisobutyrate FT dehydrogenase and related beta-hydroxyacid dehydrogenases, FT family membership" FT /db_xref="GOA:Q930C6" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q930C6" FT /protein_id="AAK64930.1" FT /translation="MTNRVALIGAGAMGGSIGARLVETGNRLTVFDPGPDKVQALVDKG FT AFAAPSAAEAAAVSDYVILSLNAPAIVRQAVFGDAGVAAGAQAGTLIIDMSSIDPNATK FT QLAADAAEKGLRWVDSPLSGGAPKALIGELTLMAGGTAQDVKDAHAVLRHVASNYTHMG FT SVGAGQTTKLINQVLCGLGFLAVAEATQLALDAGVDASKIPQALMGGRADSAILQEYMP FT RFVTKDYRHTGRIDNMVKDLAGAQDLARRTNTAMPLTAACAEIHRMLTAAGLGGEDQAA FT LMEFFRGPNKENFK" FT gene 280002..280334 FT /locus_tag="SMa0518" FT CDS 280002..280334 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0518" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q930C5" FT /protein_id="AAK64931.1" FT /translation="MITRYALFEGKVKDGHTEAFRKAVIERILPKWKQFPHATDVRISF FT AESRDEGAPELSMILAINYPDLEAVEEALASPVRAEARAATEAVLAEFFEGRIHHHVMS FT ASEFKL" FT gene 280693..281535 FT /locus_tag="SMa0520" FT CDS 280693..281535 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0520" FT /product="Transcriptional regulator, RpiR family" FT /note="Contains a helix-turn-helix domain, rpiR family.The FT best characterised member of this family is RpiR, a FT regulator of the expression of rpiB gene, family FT membership" FT /db_xref="GOA:Q930C4" FT /db_xref="InterPro:IPR001347" FT /db_xref="UniProtKB/TrEMBL:Q930C4" FT /protein_id="AAK64932.1" FT /translation="MLIAERVQTIADTLTPAERRLVKEIIAKPRDVALGTAGELARRTG FT VHEATASRLARKLGFETYAGFRHAIRDEFIVKTDPALRVRRTLETSRGHGMLEMLVQQE FT IEALTRLSSYVDEERLAAAAAALSDRRRIFIFARGNAETLAVLMNRRLRRMAFETVLVC FT GDSRDIAEQILSMGPDDALLVFAFRRQPRAYAPLIERAGKVGAVSVVVSGTVGPSLSPK FT ADHLLAAPRAGDADAFQTLTVPMAICNGLILSMAQSDEVRSLSNLEQLGELIGELEGR" FT gene 281664..282392 FT /locus_tag="SMa0522" FT CDS 281664..282392 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0522" FT /product="ABC transporter, periplasmic solute-binding FT protein" FT /note="best similarity Fe3+ and thiamine transport systems, FT family membership" FT /db_xref="UniProtKB/TrEMBL:Q930C3" FT /protein_id="AAK64933.1" FT /translation="MKRMMMIGAVLVALAAPAMAQDVDTLSPEALLTLAQKEGKVTVYS FT FTSRIARVEKAFEEAYPGIDLIGFDMSSTEMITRLRTEAAAGITNADVVYVSDAPVVLS FT DLLETGLLKNYVPPRIADKLDTAFKSPLLAQRLSTKVLMYNEAAYPNGAPIKNLWDLTT FT PEWKGKVLMVDPLQRGDYLDLMTEFVLRSDEMAKAYEALFRKPIELDDGVETAGHQFIV FT DLFENDLVLLADGRCECGGW" FT gene 282373..282777 FT /locus_tag="SMa0523" FT CDS 282373..282777 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0523" FT /product="ABC transporter, periplasmic solute-binding FT protein" FT /note="best similarity to Fe3+ transport systems, possible FT frameshift leading to truncated proteins (SMa0522 & FT Sma0523), family membership" FT /db_xref="UniProtKB/TrEMBL:Q930C2" FT /protein_id="AAK64934.1" FT /translation="MNAAVGKLGQDQPPVGFTSYSDRRDNEDEGWALQVVNDVVPSNGI FT VFPALLALTADTKNPAASRLAIDFLMGDDSETGGPGYAPFYVAGDWPTRSDIKGHPDAI FT PLADFKAWRVDPAATATIRKSVGDLVLQLQ" FT gene 282774..284579 FT /locus_tag="SMa0525" FT CDS 282774..284579 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0525" FT /product="ABC transporter, permease" FT /note="Most similar to those transporting ferric (Fe3+) FT iron, specificity unclear" FT /db_xref="GOA:Q930C1" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:Q930C1" FT /protein_id="AAK64935.1" FT /translation="MIRVPPSPSGRGASALSDILMSTQSRNRSFKDAFLSPGLGLKAAV FT LVLLTALVAAPLLKVFGATLAPGAWSAWSDVLASNLSRNLFWLPLANTMILGAGVATGC FT VLVGGFLAWLVVMTDVPFRRTIGLLATLPFMIPSFATALAWGSLFRNARVGGQIGFLEG FT LGFSVPDWLAWGMVPTLVVLMAHYYSLAFTVIAAALATVNSDLVEAAQMTGAGRRRIFL FT GIVLPVALPALVAGASLTFAGAVSNFAAPALLGLPVRMQTLATRLYGMIEIGQAERGYV FT LAILLILVSAFFLWAGNRVISGRRSYATITGKGGRSKRFALGTARLPLFVAAASICVLT FT TVVPVVILIASSLAPSSSALFSDWSLHYWIGASDPAIARGQAGIWNNPLILSATGVTVG FT LGVTVAFSASLVGLLVAFVLARSRSGFLSAAINQISFLPLLVPGIAFGAAYVALLGAPI FT GPLPALYGTFLLLVIAATAYLVPFAVQTGRAVIQQVSGDLDESARMTGAGFLRRLFAIT FT VPLAIRGLSAGALIVFVKIVRDLSLVVLLFTPTMPLLSVLAYRYASDGFTQFANALTVV FT VLVISVAATLFANRLQAKSQPWLQS" FT gene 284576..285622 FT /locus_tag="SMa0526" FT CDS 284576..285622 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0526" FT /product="ABC transporter, ATP-binding protein" FT /note="Most similar to the cd03259, ABC_Solutes_Sugar FT family; This family comprised of systems involved in the FT transport of apparently unrelated solutes and systems FT specific for di- and oligosaccharides and polyols, family FT membership" FT /db_xref="GOA:Q930C0" FT /db_xref="HSSP:1G29" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q930C0" FT /protein_id="AAK64936.1" FT /translation="MIQIESLHKQFGSYEAVQGVSLSVPKGAFLVLVGPSGCGKSTILR FT MLAGLEAPTSGTITFGGNTVSDGGRGWVIEPSRRDTGLVFQSYALWPHMTVAGNIDWPL FT KVAGLDRDKRCSRVGEVLDLLGIGQLAARYPNEISGGQQQRVAIARMIAPKPGILLFDE FT PLSNLDAKLRVEMRTELLRVHRATGATSVYVTHDQVEAMTMATHVAVMNAGRIEQFGSP FT GELVARPRTAFVATFVGTPPANLVPVVNGAYCGRLADAALAGRNGSAMFRPEELTLAES FT PSDRTLTLDYAEASPMAGRVMVTGIRADLRLTAIVDSLPSFSVGHEVHFQLPPAPSMFF FT TPEGVRAQ" FT gene 285619..286218 FT /locus_tag="SMa0527" FT CDS 285619..286218 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0527" FT /product="phosphatase" FT /note="Phosphoglycerate mutase family protein; Most similar FT to GpmB, Fructose-2,6-bisphosphatase; Lesser similarity to FT GpmA, Phosphoglycerate mutase, family membership" FT /db_xref="GOA:Q930B9" FT /db_xref="HSSP:1C80" FT /db_xref="InterPro:IPR013078" FT /db_xref="UniProtKB/TrEMBL:Q930B9" FT /protein_id="AAK64937.1" FT /translation="MKRIILVRHGESAWNSVRRLQGQADIGLSARGEAQATALRATIEA FT MRPDHVIASDLLRARHTAALLGYPHAQLSPALREIDVGDWTGRAIGDLMAEDQDAYLGW FT RAGTYAPRGGERWQEFRDRVTAGLGKAVSIPGERLLVVCHGGVIRALLDGLLGLPPKRI FT IPVGPASVTVLADKPGGMRLETFNFSPDGPVFDAPD" FT gene complement(286919..287350) FT /locus_tag="SMa5025" FT CDS complement(286919..287350) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa5025" FT /product="hypothetical protein" FT /note="Has weak, possibly spurious, similarity to the SAM- FT binding domain found in methyltransferases" FT /db_xref="GOA:B3KLX3" FT /db_xref="InterPro:IPR013216" FT /db_xref="UniProtKB/TrEMBL:B3KLX3" FT /protein_id="ACF07971.1" FT /translation="MAKDLSPRLLAIVDALPLRRGMRVLEIGCGPGAMAREIAGRIGDG FT HVLAIDRSAKAIAQAQAASQAEIGSGRLSLRQVAAEDFELEAGEMPYDIAVAVRVGALD FT GRHPEAGRRAKRRVAAALTPQGQLLIDGGDPLRRLLLDD" FT gene complement(287402..287641) FT /locus_tag="SMa0535" FT CDS complement(287402..287641) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0535" FT /product="hypothetical protein" FT /note="Miscellaneous; Unknown" FT /db_xref="GOA:Q930B8" FT /db_xref="InterPro:IPR019887" FT /db_xref="UniProtKB/TrEMBL:Q930B8" FT /protein_id="AAK64938.2" FT /translation="MQAAHLVARFESGKTCDQIAPRVKAIPFVTRIDSLAGEIDLLVSV FT DADSIDSVEDVRRQVASVPGIATVTTALVLRRHL" FT gene 287923..288336 FT /locus_tag="SMa0537" FT CDS 287923..288336 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0537" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q930B7" FT /protein_id="AAK64939.1" FT /translation="MTHTKAPITAEDTIRSWAGAVAACDIEAVCYADPLLVFDVVGQLQ FT REGKALYRRAWEDEFFPWHGGTGKFALRELSVHAGGDIAFATGLLDCGGTEGGRPAEYT FT LRLTLGLAKTPNGWYIVHEHSSEPTSFNEKVVG" FT gene 288341..288703 FT /locus_tag="SMa0538" FT CDS 288341..288703 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0538" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q930B6" FT /protein_id="AAK64940.1" FT /translation="MALLDEILEIERRLWRNDADVYAATYLPQAVLIFPGIGRIDLDTA FT VEAIRGENAAGRHWAEVSFSAETAVEVAAGTCLVAYHADARWNDQPTAEAVDCLTVYVK FT RDGRWRVAAHQQTASA" FT gene 289833..290228 FT /locus_tag="SMa0541" FT CDS 289833..290228 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0541" FT /product="conserved hypothetical protein" FT /note="Has similarity to a PRC-barrel domain; The PRC- FT barrel is an all beta barrel domain found in photosystem FT reaction centre subunit H of the purple bacteria and RNA FT metabolism proteins of the RimM group; PRC-barrels are FT approximately 80 residues long, and found widely FT represented in bacteria, archaea and plants; This domain is FT also present at the carboxyl terminus of the pan- bacterial FT protein RimM, which is involved in ribosomal maturation and FT processing of 16S rRNA; A family of small proteins FT conserved in all known euryarchaea are composed entirely of FT a single stand-alone copy of the domain" FT /db_xref="InterPro:IPR007903" FT /db_xref="UniProtKB/TrEMBL:Q930B5" FT /protein_id="AAK64941.2" FT /translation="MRRILIALAATTTIVGAAAAQTAETTTTETFVTAKPTDVLSYNLI FT NLNVTNTANESIGEIKDLVLSEGQLAGYILSVGGVLGMGERYVVVSPKALKITYVENDK FT KWTAVMDATKDQLKAAPEFKYEGRWKR" FT gene 290367..290957 FT /locus_tag="SMa0543" FT CDS 290367..290957 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0543" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q930B4" FT /protein_id="AAK64942.1" FT /translation="MVAVALLMPGTDEDATETATPPATTTEPTTPQPSTSAPPPTTEPA FT PTTPRRNHQPLSRPTRSPRSRLTHGSDRRSLLLDRRNVRDASRDRRARRPSRFGCQRRN FT NNVSSRACGSQMATQDKRGGNGRNAGNGSYLRRTSSTLSIESASTLTSRSISPARESIR FT VTNGTAPYLRGRFLSISPHQAAFDAVEDFPHNL" FT gene complement(291198..291638) FT /locus_tag="SMa0545" FT CDS complement(291198..291638) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0545" FT /product="conserved hypothetical protein" FT /note="Predicted nucleic acid-binding protein, contains PIN FT domain" FT /db_xref="UniProtKB/TrEMBL:Q930B3" FT /protein_id="AAK64943.1" FT /translation="METLVADASIAIKWVVEEEGTDSAVELRSRFRFAAPELLIPECAN FT ILWKKVQRGELSRDEAVLAAKLLERSGIDFVSMTGLLEEATNLSIVLSHPAYDCTYLIA FT AQRTGSRFVTADMRLLRIVSERAPGEIARLCVSLPDARNDAH" FT gene complement(291638..291877) FT /locus_tag="SMa0548" FT CDS complement(291638..291877) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0548" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q930B2" FT /protein_id="AAK64944.1" FT /translation="MPGNLHVRNLDDDLISKLKIRAARHGRSAEAEHREILRQALASEG FT GPDFEELAADLRKLTASRKQTPSEVLLRESRDER" FT gene 292217..293509 FT /locus_tag="SMa0551" FT CDS 292217..293509 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0551" FT /product="hydrolase" FT /note="belongs to superfamily of metal dependent FT hydrolases, family membership" FT /db_xref="GOA:Q930B1" FT /db_xref="InterPro:IPR006680" FT /db_xref="UniProtKB/TrEMBL:Q930B1" FT /protein_id="AAK64945.2" FT /translation="MGMALIGPGFIDLDALSDIDTGVLGLDHQPGWKKGRVWPRDYVEE FT GPVEMLTPEELAFQKRYAFAHLIRNGITTALPIASLFYRAWNETPEEFASAAESAADLG FT LRVYLGPAFRAGHSVIEADGTLTVEIDAARGRAGLDAAIAFCAAHDNTHGGLVRAMLAP FT DRVEYWTADLLKRTAGVARDLGVPVRLHCCQSTFEVETIRRSFGTGSAEWRHDIGFLSE FT RALLPHGTHTDREGLRIIADSGATVVHCPLVMARHGAALNHFGDLRRAGLRLGMGTDTW FT PPDMILNMQIGLMLGRVMGGELDSPSSADLYDVATLGGADARGRPDLGRLQAGAAADIV FT VIDLAAHHLGQVRDPIAGLVASANGRDVRTVFIAGRRVMSEGTIPGFDFAEAHARAGAQ FT FERLVAQYPRRTWRHPAVQSIFPPSYEVTRT" FT gene 293602..294093 FT /locus_tag="SMa0552" FT CDS 293602..294093 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0552" FT /product="putative cyclic amidohydrolase" FT /note="has similarity to dihydroorotase over about 50% of FT its length; possible frameshift, conserved hypothetical FT protein" FT /db_xref="GOA:Q930B0" FT /db_xref="InterPro:IPR006680" FT /db_xref="UniProtKB/TrEMBL:Q930B0" FT /protein_id="AAK64946.2" FT /translation="MCDLFVRNATVVTEERTFDGGISVSNGRIDELVVGQRDIAAARQI FT IDASGLLLLPGLVDAHVHFSEPGRGHWEGFETGSRAAAAGGITTFVEMPLNAQPATIDA FT AALVMKKAAAKQSHIDYALWGGLVDDNLDDLADLRRGGVVGFYRERHCRGGGRGLAGAT FT " FT gene 294071..294868 FT /locus_tag="SMa0554" FT CDS 294071..294868 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0554" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q930A9" FT /protein_id="AAK64947.1" FT /translation="MVWREQLDLLLGALSALHIGGLQAEGAEIWRDPEGQFVWELLCHP FT AVIAYYERHYPFAPPLLLRAAGDRRLPDTYRSQWQAELEQEGFDAAYRQFLHLNARFIS FT NDVIGYFIELLDGFYVFDTHIDEFRRELEQPARLGGWLTRPDRWQLLEGMASFYEFALD FT LDQYLAALEFPMLRGHVWLHFAYWFGNGGARMEEVALWLQNAVAHAAEDESIDGAELGE FT ALARLRAPQRYPLVLIEQTAEVLGPWLESSGVGEQLSAGSRSL" FT gene complement(295587..296474) FT /locus_tag="SMa0557" FT CDS complement(295587..296474) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0557" FT /product="Transcriptional regulator, LysR family" FT /note="Contains LysR-type HTH and substrate binding domain, FT family membership" FT /db_xref="GOA:Q930A8" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q930A8" FT /protein_id="AAK64948.1" FT /translation="MQREELGDLLAFLAVAEEESFTKAAARLGTSQSSLSLIIKRLEAR FT LGVRLLTRTTRSVAPTEAGEQLFSTLAPAFGTIEAQLSALSEFRDKPAGNFRITAGQHS FT IDTILWPKLSAFLLAYPDIKVELVAESALTDIVAERFDAGVRLGDQVEKDMIAVRIGPP FT ARMIVVGAPSCLRDRPPPKTPQELTTHRCINLRLPSYGGFYAWEFERDGHEVRVRVDGQ FT VAFNGVPQIVKAALDGFGLTYVHEDVVREYLKNGRLVQILDDWTPPFPGYHLYYPSRRH FT PSPAFTLLVEALKE" FT gene 296598..296990 FT /locus_tag="SMa0558" FT CDS 296598..296990 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0558" FT /product="conserved hypothetical protein" FT /db_xref="GOA:Q930A7" FT /db_xref="InterPro:IPR007138" FT /db_xref="UniProtKB/TrEMBL:Q930A7" FT /protein_id="AAK64949.2" FT /translation="MGLKRLLIIAASIIAPLPVQQVVAQEAKGPVIRIAELEIDPAQMA FT AYSAAVKEEMEESMRVEPGVLALYAVSIKGQSHHLRFFEMYADQAAYESHRESPHFRKY FT VETTKDMITSRKLLETDNFQLSAKLR" FT gene 297048..297791 FT /locus_tag="SMa0559" FT CDS 297048..297791 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0559" FT /product="4-carboxymuconolactone decarboxylase" FT /note="parital similarity to members of the FT carboxymuconolactone decarboxylase family, conserved FT hypothetical protein" FT /db_xref="InterPro:IPR003779" FT /db_xref="UniProtKB/TrEMBL:Q930A6" FT /protein_id="AAK64950.2" FT /translation="MMTTSNAGAQQPNVEGRRFSPDQVRSVAPALEQYTQQRLYGDVWQ FT RPGLNRRDRSLVTIAALIARGEAPALTYYADQALENGVKPSEISETITHLAYYSGWGKA FT MATVGPVSEAFAKRGIGQDQLAAVESTPLPLDEEAEAQRATTVGNQFGSVAPGLVQYTT FT DYLFRDLWLRPDLAPRDRSLVTIAALISVGQVEQITFHLNKALDNGLSEEQAAEVITHL FT AFYAGWPNAMSALPVAKAVFEKRRG" FT gene 297935..298318 FT /locus_tag="SMa0561" FT CDS 297935..298318 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0561" FT /product="conserved hypothetical protein" FT /note="Uncharacterized protein conserved in bacteria" FT /db_xref="InterPro:IPR016888" FT /db_xref="UniProtKB/TrEMBL:Q930A5" FT /protein_id="AAK64951.1" FT /translation="MLPMNIWPTDELRQIAESDDLHIAPFRENGRTYGTLTWIWSVVVD FT GELYVRGYNGQQSRWYQAAIRQKAGRITAAGMTKEVSFEPVEGAINDQIDEGYRRKYAT FT SRYLAPMIGERARAATVKITPKD" FT gene 298329..299318 FT /locus_tag="SMa0563" FT CDS 298329..299318 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0563" FT /product="aldo/keto reductase" FT /note="Similar to Tas, Predicted oxidoreductases (related FT to aryl-alcohol dehydrogenases), family membership" FT /db_xref="GOA:Q930A4" FT /db_xref="HSSP:1GVE" FT /db_xref="InterPro:IPR001395" FT /db_xref="UniProtKB/TrEMBL:Q930A4" FT /protein_id="AAK64952.1" FT /translation="MQKRKLGQGLEVSALSLGCMGYGKARDIPDRPQMIELLRRAVDLG FT MDFFDTAEVYGPWTNEEMVGEAFAGMRDKVKIATKFGWDIDQSTGEHGGGVNSKPTQIR FT SAVEGSLKRLRTDFIDLLYQHRVDPDVPMEDVAGTVKDLIAEGKVRYFGLSEAGAESIR FT RAHAVQPVAALQSEYSLWTREPEAEIIPTLEELGIGLVPFSPLGKGFLAGKIDASTAFA FT ANDFRSQIPRFAPEAREANQALVDLIRSVGERRSATPAQVALAWLMAQKPWIVPLFGTR FT KLERLEENLGALSVTLSDDDLEQIESGAAAIRIEGARYPEEMLRRSGR" FT gene 299384..300487 FT /locus_tag="SMa0564" FT CDS 299384..300487 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0564" FT /product="dehydrogenase" FT /note="similarity to glucose/sorbosone dehydrogenase, FT family membership" FT /db_xref="GOA:Q930A3" FT /db_xref="InterPro:IPR012938" FT /db_xref="UniProtKB/TrEMBL:Q930A3" FT /protein_id="AAK64953.2" FT /translation="MPILPEKRRTRMRKRLICTTLSILVGGCCLSGTSMAQDASTPILD FT RGEGAWSSSVLADGLDYPWDIVRDGERLILTEKAGTVVIIEGGNVQRSTLQTSDPLRTE FT GGAGLLGIALAPDFADSGQAFFYYSYSSGSEPANRIVAARFDGNTWRETAVLVDAIPGH FT RLYNGGRIAIGPDDHLYVTTGWTENYERPQDLQSLAGKVLRLTLAGGVPEDNPFQGSLV FT YSFGHRNPQGLAWNAEGELFVSEHGQAALDEINLIAPGANYGWPIISGDETQEGMQPPF FT VHSGGDTWAPSGIAFAGNELLVTALQGRGLYVLDRQARTLQPVVSLGERVRHVLPVGDD FT LLLITTNRSPRGQGPSKDRLVRLSAQN" FT gene 300571..301050 FT /locus_tag="SMa5026" FT CDS 300571..301050 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa5026" FT /product="conserved hypothetical protein" FT /note="Uncharacterized conserved protein, contains double- FT stranded beta-helix domain [Function unknown]; Weak FT similarity to cupin" FT /db_xref="InterPro:IPR014710" FT /db_xref="UniProtKB/TrEMBL:B3KLX4" FT /protein_id="ACF07972.1" FT /translation="MKKLIAAASLVILSTAIARAQTIEITPNASAPSALGDAKLFSGHV FT VVASLFPANEFTHGTGGHVTFAPGARTAWHTHPAGQMLIVTSGKGWVQQEGGEKREINS FT GDVVWIPVGVNHWHGATNKTGMGHIAISYMKEGKNVEWGKLVTDEEFVGQVPPRD" FT gene 301204..301761 FT /locus_tag="SMa0567" FT CDS 301204..301761 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0567" FT /product="hypothetical protein" FT /note="Has similarity to the carboxy terminus of Acs, Acyl- FT coenzyme A synthetases/AMP-(fatty) acid ligases" FT /db_xref="GOA:Q930A1" FT /db_xref="HSSP:1PG4" FT /db_xref="InterPro:IPR000873" FT /db_xref="UniProtKB/TrEMBL:Q930A1" FT /protein_id="AAK64955.1" FT /translation="MRSSLRGLSINSFFETTSYLEFRSSYSDESARIDQVAEPAFDVSQ FT HGGIVIHGRSDATLNPGGVRIGTAEIYSQVEQLHEVAESLCIGQDWDDDIRVILFVLLR FT DGFDLTEELQAKIKAKIRTGASPRHVPTKIVQVSDIPRTKSGKIVELAVRDVDHGRPVV FT NKEVLANPEALDQFVAMVELSV" FT gene complement(301877..303766) FT /gene="cyaF4" FT /locus_tag="SMa0570" FT CDS complement(301877..303766) FT /codon_start=1 FT /transl_table=11 FT /gene="cyaF4" FT /locus_tag="SMa0570" FT /product="CyaF4 adenylate cyclase" FT /note="CATALYTIC ACTIVITY: ATP = 3',5'-cyclic AMP + FT diphosphate, SIMILARITY: Belongs to the adenylyl cyclase FT class-3 family, SIMILARITY: Contains TPR repeats, function FT unclear" FT /db_xref="GOA:Q930A0" FT /db_xref="InterPro:IPR013026" FT /db_xref="UniProtKB/TrEMBL:Q930A0" FT /protein_id="AAK64956.1" FT /translation="MERKLCAILAADVVGYSALMERDEAGTFERLHAGRKELFEPEIAR FT HHGKVFKLMGDGLLAEFGSVVDAVECAVSLQRGLTERNAAVPHDQRIRVRIGINLGEVI FT VEREDRYGEGVNVAARLQQLAEPGGICVSGKVAREVEKKLAFGFEPMGEQKVKNIIEPV FT QAFRIIIEWQARRRPVIRFQRYWVGTGTAVLALLLVLAGAAWQFWPTATVSGKPSVAVL FT PFDNYGGDEASGRLADGLTEDIITDLARFPEFKVIARNSTETYKGKAIDVREIGKALDV FT GFVVEGSIAREADRVRVTAQLIDSKQGRHLWSQRWDRPDKEVFVIQAEIAEQIANRLGG FT GAGLVQESGRIAAHRKVPGNLNAYELYLLGTERLEQLDQANLEAALSLLTQAVQSDPGL FT ARGWVELFHTHDLLAGLGIEPERNRALADAAAERALTLDPSDPEAHAVYGSSLGMRGDF FT ARAEAEYEAALRMAPNAAEILIFYIGWASTFGKPERGADLVERAIQLDPNYPGWANRPF FT GLAYFMAGRYPEAVTMFERLGIERHNRWSWAAHAGALAAAERRTEAAALVARAMAAHPD FT LSIELIANEPGWSDAERRRFINTMRLAGFPACTKPEVLAKIEKPLRLPECASL" FT gene 304557..304880 FT /locus_tag="SMa0572" FT CDS 304557..304880 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="SMa0572" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR007712" FT /db_xref="UniProtKB/TrEMBL:Q92ZZ9" FT /protein_id="AAK64957.1" FT /translation="MKTIIPRQLARSDVEAAIDYYAREAGTEVTHGFIGALQAAYASIA FT SHPEAGSLRYAYELGLPDLRSVSLKRYPYLIFYRDQPDHVDVWRVLHAKRDNPQWMQEP FT NNH" FT gene complement( |