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EBI DbfetchID ACNQ01000008; SV 1; linear; genomic DNA; WGS; PRO; 620911 BP. XX AC ACNQ01000008; ACNQ01000000; ACNQ00000000; XX PR Project:30503; XX DT 13-MAY-2009 (Rel. 100, Created) DT 13-MAY-2009 (Rel. 100, Last updated, Version 1) XX DE Yersinia pestis Nepal516 Chromosome_Sequence08, whole genome shotgun DE sequence. XX KW WGS. XX OS Yersinia pestis Nepal516 OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Yersinia. XX RN [1] RP 1-620911 RA Plunkett G.III., Anderson B.D., Baumler D.J., Burland V., Cabot E.L., RA Glasner J.D., Mau B., Neeno-Eckwall E., Perna N.T., Munk A.C., Tapia R., RA Green L.D., Rogers Y.C., Detter J.C., Bruce D.C., Brettin T.S.; RT "Yersinia pestis Nepal516A whole genome shotgun sequencing project"; RL Unpublished. XX RN [2] RP 1-620911 RA Plunkett G.III., Anderson B.D., Baumler D.J., Burland V., Cabot E.L., RA Glasner J.D., Mau B., Neeno-Eckwall E., Perna N.T., Munk A.C., Tapia R., RA Green L.D., Rogers Y.C., Detter J.C., Bruce D.C., Brettin T.S.; RT ; RL Submitted (21-APR-2009) to the EMBL/GenBank/DDBJ databases. RL Genome Center of Wisconsin, University of Wisconsin, Enteropathogen RL Resource Integration Center (ERIC-BRC), 425G Henry Mall, Madison, WI RL 53706-1580, USA XX DR SILVA-LSU; ACNQ01000008. XX CC Yersinia pestis Nepa1516A, isolated from a soil sample from Nepal, CC is being sequenced for a comparative genome analysis of Yersinia CC pestis strains from different parts of the world. It is a separate CC isolate from the previously sequenced Y. pestis Nepal516. CC Two libraries were constructed with average insert sizes of 1879 CC bp (39925 reads) and 9479 bp (39324 reads). Additional sequences CC from primer walk reads and PCR reactions were used to close gaps CC and improve quality. The assembled sequences were aligned with the CC finished genomic sequence of Y. pestis Nepal516 to predict order CC and orientation of contigs and scaffolds. This order and CC orientation is based on the assumption that no major rearrangements CC have occurred between the two genomes; however this has not been CC experimentally verified. CC Genome sequencing, assembly, and finishing were performed by the CC Department of Energy's Joint Genome Institute (DOE-JGI), in Walnut CC Creek, CA and at Los Alamos National Laboratory, Los Alamos, NM. CC Annotation and database submission were carried out by the CC Enteropathogen Resource Integration Center, Madison, WI (ERIC CC http://www.ericbrc.org/portal/eric), a Bioinformatics Resource CC Center supported by the NIH/NIAID. CC Funding for sequencing was provided by the Intelligence Technology CC Innovation Center; funding for the annotation was provided by the CC NIH/NIAID. CC For further information about the source of the DNA, contact Tom CC Brettin (brettin@lanl.gov) or David Bruce (dbruce@lanl.gov). CC Genome Coverage: 16x CC Sequencing Technology: ABI. XX FH Key Location/Qualifiers FH FT source 1..620911 FT /organism="Yersinia pestis Nepal516" FT /strain="Nepal516" FT /isolate="A" FT /mol_type="genomic DNA" FT /db_xref="taxon:377628" FT gene <1..936 FT /locus_tag="YP516_0884" FT rRNA <1..936 FT /locus_tag="YP516_0884" FT /product="23S ribosomal RNA" FT gene 1042..1138 FT /locus_tag="YP516_0886" FT rRNA 1042..1138 FT /locus_tag="YP516_0886" FT /product="5S ribosomal RNA" FT gene complement(1549..1890) FT /gene="yfiM" FT /locus_tag="YP516_0887" FT CDS complement(1549..1890) FT /codon_start=1 FT /transl_table=11 FT /gene="yfiM" FT /locus_tag="YP516_0887" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR017028" FT /db_xref="UniProtKB/TrEMBL:Q1CLH6" FT /protein_id="EEO77228.1" FT /translation="MRLHIYLRRLLIAPLLLLTSACTHVANDSWTGKDKAQHFFASAAL FT AAAGTAYGEHQNWSDAKSRNFGLLFSIGIGAGKEWYDSRQAGTGWSWKDFTWDIAGAIT FT GYSLYRAAN" FT gene complement(1952..3307) FT /gene="pssA" FT /locus_tag="YP516_0888" FT /note="similar to pss" FT CDS complement(1952..3307) FT /codon_start=1 FT /transl_table=11 FT /gene="pssA" FT /locus_tag="YP516_0888" FT /product="phosphatidylserine synthase FT (CDP-diacylglycerol-serine O-phosphatidyltransferase)" FT /EC_number="2.7.8.8" FT /note="GO_function: GO:0016780 - phosphotransferase FT activity, for other substituted phosphate groups; FT GO_function: GO:0003824 - catalytic activity; GO_function: FT GO:0003882 - CDP-diacylglycerol-serine FT O-phosphatidyltransferase activity; GO_process: GO:0008654 FT - phospholipid biosynthetic process; GO_process: GO:0008152 FT - metabolic process" FT /db_xref="InterPro:IPR016270" FT /db_xref="UniProtKB/TrEMBL:Q1CLH5" FT /protein_id="EEO77229.1" FT /translation="MLSKFKRSKHQQHLAQLPKLPQSVDDVQTLYCPKVFRSTLLELIA FT QATKRIFLVALYLEQDDAGRDVMNALYQAKQSHPELEIYVLVDWHRAQRGRIGAAAVNT FT NADWYCDMAAKHPNISVPVYGVPVNTREALGVLHLKGFIIDDTVIYSGASINDVYLYQN FT DKYRYDRYQLITNPSLATIMVDYVKQRILSAGAVQRLDRNDRPTTPEIKNETRQFRSSL FT RDASYQFSAQAHNDELAVTPLVGLGKKSLLNKTIHHLMASADERLTICTPYFNLPALLV FT RNIIYLLREGKQVEIIVGDKTANDFYIPEDQPFKIIGALPYLYEINLRRFLSRLQPYVD FT NGQLIVRLWKDGDNTYHLKGMWVDNNWQLITGNNLNPRAWRLDLENAILIHDPKHEMHE FT QRAKELECIRTHTKVVSHYLELENIQQYPVKVRKLIRRLRRIRIDRLISRIL" FT gene complement(3483..6125) FT /gene="yfiQ" FT /locus_tag="YP516_0889" FT CDS complement(3483..6125) FT /codon_start=1 FT /transl_table=11 FT /gene="yfiQ" FT /locus_tag="YP516_0889" FT /product="predicted acyl-CoA synthetase: NAD(P)-binding FT subunit and ATP-binding subunit" FT /note="GO_function: GO:0008080 - N-acetyltransferase FT activity; GO_function: GO:0005524 - ATP binding; FT GO_function: GO:0003824 - catalytic activity; GO_function: FT GO:0005488 - binding; GO_process: GO:0008152 - metabolic FT process" FT /db_xref="InterPro:IPR016181" FT /db_xref="UniProtKB/TrEMBL:Q1CLH4" FT /protein_id="EEO77230.1" FT /translation="MSQRGLEALLRPKSIAVIGASEKPERAGFLMMRNLLDGGFNGPIL FT PVTPNHKAVCGVLAYANIASLPITPDLAILCTHDCRNLTLLEDLGNRGCKAAIILSAAP FT EQFPELKACAQRHHMRLLGPNSLGLLAPWQGLNASFSPVPIKKGRLAFISQSAAVANTI FT LDWAQQREVGFSYFIALGDSLDIDVDDLLDFLARDSKTSAIMLYIEHISDARRFLSASR FT SASRNKPVLVVKSGRSQRAQQLLNGQQGLDAAYDAAIQRAGLLRVQDTHELFSAVETLS FT HMRPLRGERLLIVSNGSAPAAMALDELIRRNGKLATLSDATQSALSEALPPFVALRNPI FT DLRDDASAERYLAALKPLLDSSDYDTLLLIHSPSAAAPGGKTAELLISAIRQHPRGKRI FT TLLTNWCGEYSSQDARRLFTEAGIPTYRTPEGAITAFMHMVEYRRNQKQLKETPALPIG FT LTANTAHVHQLIRQALAEGATQLDTHEVQPILEAYGLRTLPTWIASDSVEAVHIAERLG FT YPVAIKLRSPDIPHKSEVQGVMLYLRTAIEVQRAADDILDRVKRTYPQARIHGLLVQSM FT ANRAGAQELRIAVEQDAIFGPLIMLGEGGIEWHHETQAAVALPPLNMVLARYLIIQAVK FT GGKIRSRGSLQPLDIPGLSRLLVQVSNLILDCPEITRLDIHPVLASGSEFTLLDVSMQL FT APVTGDPQARLAIRPYPHELEEKVTLRDNSQCLFRPILPEDEPLLKLFIDQVTKEDLYY FT RYFSEINEFSHDDLANMTQIDYDREMAFVAVRQNSEGPEIIGVTRAFSDPDNIDAEFAV FT LVRSDLKGLGLGRALLEKMIRYARSHGLSRLTAVTMPNNRGMIGLAQKLGFTIDVQIED FT GIVNLELTL" FT gene complement(6168..6917) FT /gene="yfiP" FT /locus_tag="YP516_0890" FT CDS complement(6168..6917) FT /codon_start=1 FT /transl_table=11 FT /gene="yfiP" FT /locus_tag="YP516_0890" FT /product="conserved protein" FT /db_xref="InterPro:IPR005636" FT /db_xref="UniProtKB/TrEMBL:Q1CLH3" FT /protein_id="EEO77231.1" FT /translation="MTDTFTTGHTLPTAITTENAVLRLRQQRLAAATRAYRARGCRAIR FT CQSCLLAERFCLCDTIKPQQANSRFCLIMFDTEPLKPSNTGRLIADILPDTHAFLWART FT EVDPELLAAISDPLRQPYVVFPEAYAEPERQVINQLPISDKPPLFILLDGTWTEAKKMF FT RKSPYLAGLPLLSLQVSHLSDYQLREAQRPEQHCTVEVATALLHQAGDIQAAEGLRDHF FT HYFRQQYLAGKPHHPVGRVTASHEENA" FT gene complement(7087..7524) FT /gene="trxC" FT /locus_tag="YP516_0891" FT CDS complement(7087..7524) FT /codon_start=1 FT /transl_table=11 FT /gene="trxC" FT /locus_tag="YP516_0891" FT /product="thioredoxin 2" FT /EC_number="1.8.1.8" FT /note="GO_function: GO:0015035 - protein disulfide FT oxidoreductase activity; GO_function: GO:0009055 - electron FT carrier activity; GO_process: GO:0045454 - cell redox FT homeostasis; GO_process: GO:0006662 - glycerol ether FT metabolic process" FT /db_xref="InterPro:IPR017937" FT /db_xref="UniProtKB/TrEMBL:Q1CLH2" FT /protein_id="EEO77232.1" FT /translation="MNTVCTACMATNRLPEERIDDGAKCGRCGHSLFDGEVINATAETL FT DKLLQDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAGKVRFVKVNTEAEPALSTRFRI FT RSIPTIMLYRNGKMIDMLNGAVPKAPFDNWLDEQLSRDPNS" FT gene 7776..8942 FT /gene="yfiF" FT /locus_tag="YP516_0892" FT CDS 7776..8942 FT /codon_start=1 FT /transl_table=11 FT /gene="yfiF" FT /locus_tag="YP516_0892" FT /product="predicted methyltransferase" FT /EC_number="2.1.1.-" FT /note="GO_function: GO:0008173 - RNA methyltransferase FT activity; GO_function: GO:0003723 - RNA binding; FT GO_process: GO:0006396 - RNA processing" FT /db_xref="InterPro:IPR016479" FT /db_xref="UniProtKB/TrEMBL:Q1CLH1" FT /protein_id="EEO77233.1" FT /translation="MNDSFSGKNGKVKVMYVRSDESSDDRNSSNRDNRNNSSRDNSNRD FT NNSRGRSQRPAGNGRPGDNARQGDNTRQGNAPRNNDSRRPDSGRNERDRPSRPARSEGS FT SPYDSPWKTVSRAPSEEPEFDHGGISGKSHIDPAQLRRQRAEETRVYGENACKALFESR FT PDAIVRAWFVQSVTPRFREALKWMAANRKAYHVVEEDELAKASGTEHHGGVCFLIKKRQ FT GLDAETYLQQQTQAKDCVLALEEVGNPHNLGGIMRTCAHFGINGVLLQDPAMLESGAAV FT RTAEGGAEHIKAINADDFLSVLDTFRKAGYTIVTTSSHKGVSLSKAELPAKMVLVLGQE FT SDGLTDSAWQQGDLSVSIGGTGRVESLNVSVATGILLAEWWRQNSAQG" FT gene complement(9065..10600) FT /gene="emrB" FT /locus_tag="YP516_0893" FT CDS complement(9065..10600) FT /codon_start=1 FT /transl_table=11 FT /gene="emrB" FT /locus_tag="YP516_0893" FT /product="multidrug resistance protein B" FT /note="GO_component: GO:0005887 - integral to plasma FT membrane; GO_component: GO:0016021 - integral to membrane; FT GO_function: GO:0015307 - drug:hydrogen antiporter FT activity; GO_function: GO:0015520 - tetracycline:hydrogen FT antiporter activity; GO_function: GO:0005215 - transporter FT activity; GO_process: GO:0006855 - multidrug transport; FT GO_process: GO:0042493 - response to drug; GO_process: FT GO:0046677 - response to antibiotic; GO_process: GO:0015904 FT - tetracycline transport; GO_process: GO:0006810 - FT transport" FT /db_xref="InterPro:IPR011701" FT /db_xref="UniProtKB/TrEMBL:Q1CLH0" FT /protein_id="EEO77234.1" FT /translation="MAQKPLEGAPLAWMTVALSLATFMQVLDSTIANVAIPTIAGDLGS FT SNSQGTWVITSFGVANAISIPVTGWLAKRVGEVRLFLWSTGLFVLASWLCGMSNSLGML FT IFFRVIQGLVAGPLIPLSQSLLLNNYPPAKRSMALALWSMTIVVAPIFGPILGGYISDN FT YHWGWIFFINIPIGLVVVLLAGSTLKGRETKTEIRPIDTIGLVLLVVGIGALQIMLDQG FT KELDWFNSTEIIVLTVVAVVAITFLIVWELTDDHPVIDLSLFKSRNFTIGCLCLSLAYM FT LYFGAIVLLPQLLQEVYGYTATWAGLASAPVGILPVLLSPLIGRFAHRIDMRQLVTFSF FT IMYAVCFYWRAYTFEPGMDFGASAWPQFFQGFAIACFFMPLTTITLSGLPPERMAAASS FT LSNFMRTLAGSIGTSITTTLWTQRESLHHAQLTEFVNPYNPNATQAYQELEKLGMSQQQ FT ASAYLAREITNQGLIISANEIFWLSAGVFLMLLALIWFARPPFTSGGGGGGAH" FT gene complement(10639..11811) FT /gene="emrA" FT /locus_tag="YP516_0894" FT CDS complement(10639..11811) FT /codon_start=1 FT /transl_table=11 FT /gene="emrA" FT /locus_tag="YP516_0894" FT /product="multidrug resistance protein A" FT /note="GO_component: GO:0009276 - 1-2nm peptidoglycan-based FT cell wall; GO_component: GO:0016020 - membrane; FT GO_function: GO:0015238 - drug transporter activity; FT GO_function: GO:0008565 - protein transporter activity; FT GO_process: GO:0006855 - multidrug transport; GO_process: FT GO:0009306 - protein secretion" FT /db_xref="InterPro:IPR006143" FT /db_xref="UniProtKB/TrEMBL:Q1CLG9" FT /protein_id="EEO77235.1" FT /translation="MSESAGAQAPQRPQNKKQQRKRVLLLLTAIFIMIGVAYLIYWFLV FT LRHHQETDNAYISGNQVQIMSQVPGSVVSVHFENTDFVKSGDVLVTLDPTDAEQAFEQA FT KTALANSVRQTHQLIINSKQYQANIALKKTELSQAQNDLKRRVVLGAAAVIGREELQHA FT RDAVEAAQASLDMAVQQYNANQALVLNTPLEKQPAIEQAAAKMRDAWLTLQRTKVVSPI FT SGYVSRRSVQVGAEISSGTPLMAVVPADQLWIDANFKETQLANMRIGQPATIVTDFYGD FT DVVYQGKVVGLDMGTGSAFSLLPAQNATGNWIKVVQRLPVRIALDEKQLKEHPLRIGLS FT SLVKVDTANTDGHVLAQNVRKEPAFMTNALSLDFAPVNQIISDIIHANAD" FT gene complement(12195..12707) FT /gene="mprA" FT /locus_tag="YP516_0895" FT /note="similar to emrR" FT CDS complement(12195..12707) FT /codon_start=1 FT /transl_table=11 FT /gene="mprA" FT /locus_tag="YP516_0895" FT /product="DNA-binding transcriptional repressor of microcin FT B17 synthesis and multidrug efflux" FT /note="GO_component: GO:0005622 - intracellular; FT GO_function: GO:0003700 - transcription factor activity; FT GO_process: GO:0006355 - regulation of transcription, FT DNA-dependent" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q1CLG8" FT /protein_id="EEO77236.1" FT /translation="MESSFSPIEQMLNSRAKRQKDFPYQEILLTRLSMHMHSKLLENRN FT KMLKAQGINETLFMALITLDAQESRSIQPSELSAALGSSRTNATRIADELEKKGWIERR FT ESHNDRRCLHLHLTEAGIEFLHQLLPPQHKCLHFLWSTLTEQEQQQLEMLTRKLLTRLD FT QMEISEQ" FT gene complement(12879..13220) FT /locus_tag="YP516_0896" FT CDS complement(12879..13220) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_0896" FT /product="putative membrane protein" FT /db_xref="InterPro:IPR019709" FT /db_xref="UniProtKB/TrEMBL:Q1CLG7" FT /protein_id="EEO77237.1" FT /translation="MNTDILMIGLVVGTVNYLFRYLPLRFGPARKQTGLLRGKMSLLLD FT SIGIASICALLVVSSTPEIIHHPQKLLPTLIGFLVICGCFYKTNSIIFATLLGALCYGL FT TFKLLTILG" FT gene complement(13217..13990) FT /locus_tag="YP516_0897" FT CDS complement(13217..13990) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_0897" FT /product="putative amino acid transporter" FT /db_xref="InterPro:IPR011606" FT /db_xref="UniProtKB/TrEMBL:Q1CLG6" FT /protein_id="EEO77238.1" FT /translation="MPNPTTAPSSTTSAAATFVEGITDSLPIVIGYLPVAFAFGLSAVK FT LGFTPLESIFFSCIIYAGASQFVITALLSAGMSLWVSALTVMAMDVRHILYGPALKHRI FT LAKLSGKKTALWAFGLTDEVFAAATTKLMKDQRRWSENWMLGIAVTSWLSWVLGTAIGA FT MFGNGPLENYPAIEASLSFMLPALFLSFLLASFKRQYSLTVIASLSGALLGVLLFSIPV FT AILAGIAGGCLATLLQPTASVVAKHREDHEQEPTP" FT gene complement(14150..15349) FT /locus_tag="YP516_0898" FT CDS complement(14150..15349) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_0898" FT /product="probable sugar transporter" FT /note="GO_component: GO:0016021 - integral to membrane; FT GO_function: GO:0005215 - transporter activity; GO_process: FT GO:0006810 - transport" FT /db_xref="InterPro:IPR011701" FT /db_xref="UniProtKB/TrEMBL:Q1CLG5" FT /protein_id="EEO77239.1" FT /translation="MQKTDTPGLSPALIVLMSVATGLAVASNYYAQPLLETIATNFNLS FT VNQAGFIVTAAQLGYAVGLMFLVPLGDMFERRGLIVGMTLLAAGGMLITAMSQNLTMMI FT IGTALTGLFSVVAQLLVPLAATLAAPEKRGKVVGIIMSGLLLGILLARTVAGALATLGG FT WRTIYWVASALMFIMALVLWRCLPRYKQHTGLNYGQLLGSIFALFIHTPVLRTRALLGA FT LSFANFSVLWTSMAFLLAAPPFGYSEATIGLFGLVGAAGALMATKAGQLADKGKARVTT FT SAGLVLLLLSWLPIAFGQHSIIALIIGIIVLDLAVQAVHVTNQSVMYRMMPEARNRLTA FT GYMTSYFIGGALGSLISAAAYQHAGWYGVSTAGLVLCLLNIVTWLVGKRSDQPANQTVE FT " FT gene complement(15577..16044) FT /locus_tag="YP516_0899" FT CDS complement(15577..16044) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_0899" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q1CLG4" FT /protein_id="EEO77240.1" FT /translation="MIGPLFDRTVLDKDSHLARTVSDENNQMKNACIDHLAVLAEVTAA FT FYRYEQALIGNDIAVLDALFWHDKRTVRFGAGEDLYGIDAIREFRQNRPSVGLDRKLKN FT TVITTFGEDTAVASTEFYREGSTRVGRQMQTWVKLPCGWRIVAAHVSLIAE" FT gene complement(16073..17470) FT /locus_tag="YP516_0900" FT CDS complement(16073..17470) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_0900" FT /product="probable amidase" FT /note="GO_function: GO:0004040 - amidase activity; FT GO_function: GO:0016884 - carbon-nitrogen ligase activity, FT with glutamine as amido-N-donor" FT /db_xref="InterPro:IPR014087" FT /db_xref="UniProtKB/TrEMBL:Q1CLG3" FT /protein_id="EEO77241.1" FT /translation="MKPASSLTISEIQQALHKGELSAQAIAQQTLDAITVANPLINAYT FT HITADRMLSEACRLDTLRAKGQPLPALAAVPYAVKNLFDVAGETTLSGASLFCDQAPAK FT QDAWAISCLSRQGAMLSGMLNMDAYAYGFTTENSHYGATHNPHDLNRIAGGSSGGSAAA FT VAAGLVHFSLGSDTNGSIRVPSSLCGIFGLKPTFGRLSRRGTHPFVASLDHIGPMARCT FT QDLAVVYDVMQGIDTQDNFQADQPVTPCQNLLTRGQQGLRSAVLGGYFHQWSDDDAKAA FT VLAVAKALEANAEVEMPQSDLARSAAFIISASEGGNQYLPALRKSPQRFEPLSRERLLA FT GAMLPATWYVQAQRFRHHFRQHILPLFEHWDILIAPATPCSATLIGQDTMRINDMDLPI FT RASMGILTQPISFLGLPVVSVPLKTTRGLPIGIQLIAPPWREDLCLRAAYALEQQGLVS FT APVSTVI" FT gene complement(17467..17670) FT /locus_tag="YP516_0901" FT CDS complement(17467..17670) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_0901" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q1CLG2" FT /protein_id="EEO77242.1" FT /translation="MKKTSEKMISMDWPAYILQMETLLAVALDEQRRAALQQQFEHIAA FT LAAPLMALPLDERQEIAGVYRL" FT gene 17639..17797 FT /locus_tag="YP516_0902" FT CDS 17639..17797 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_0902" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q1CLG1" FT /protein_id="EEO77243.1" FT /translation="MLIIFSDVFFMTTPVLTKQAVNQIQGGELGGYSLCGCYLAYYFLT FT SAILFAD" FT gene 17968..18813 FT /locus_tag="YP516_0903" FT CDS 17968..18813 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_0903" FT /product="putative rpiR-family transcriptional regulatory FT protein" FT /note="GO_function: GO:0003700 - transcription factor FT activity; GO_function: GO:0005529 - sugar binding; FT GO_process: GO:0006355 - regulation of transcription, FT DNA-dependent; GO_process: GO:0005975 - carbohydrate FT metabolic process" FT /db_xref="UniProtKB/TrEMBL:C4GQA3" FT /protein_id="EEO77244.1" FT /translation="MGKGMKQIDERLRGHYTQLTPQEQRVADFIFAHFDDLISYNSAEL FT ARLSGVSKATVSRLFKRLGYGSYREMREEVRALRQSGMPLTDNRDAVQGNTLLARHYKQ FT EMANLAHWVNQLDSQQLTDVIDAMAQAPRILLLGLRNSYPVALHLRQQLLQVRQQVHVI FT PQAGQTLAEELVDITPHDLVIVVAFRRRPKAIREILLHMQGQGVPTLLICEPQAQSLLS FT LARWRLTTPLDSVSAFDSYSAAMSLVNLLSNALLHKILAEGRQRIHQIANLYDSLGELE FT " FT gene 18815..19030 FT /locus_tag="YP516_0904" FT CDS 18815..19030 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_0904" FT /product="putative membrane protein" FT /db_xref="UniProtKB/TrEMBL:C4GQA4" FT /protein_id="EEO77245.1" FT /translation="MNQSCARHAILCGTRFTLPPIPTFQSTSSVFVISLPVVVLMHLNG FT AFQSSYCTLFVSSFIHLYALKFNYST" FT gene 19141..19929 FT /locus_tag="YP516_0905" FT CDS 19141..19929 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_0905" FT /product="putative amino acid ABC transporter, periplasmic FT protein" FT /note="GO_component: GO:0030288 - outer membrane-bounded FT periplasmic space; GO_function: GO:0005215 - transporter FT activity; GO_process: GO:0006810 - transport" FT /db_xref="InterPro:IPR018313" FT /db_xref="UniProtKB/TrEMBL:Q1CLF9" FT /protein_id="EEO77246.1" FT /translation="MNIKKRMLWLWAVLVLVQAPAVLADQLEKIQQRGVLRVAVPQDFP FT PFGSVGTDLQPQGYDIDMAQYLADKMKLKLQLVSVTSANRVPYLQTDKVDLVISSLGKN FT PEREKAIAFSRAYAPFFLGVFGAKDDELKQPEQLAGKTIGVTRGAVEDMVLSEIAPKAA FT QIRRYEDNNTTLSAYLSGQVNYLATGNLVISALARQNPKQAPVAKFMLKDSPCYIGLRQ FT GEPALKAKVDALIGDALQDNTLNGLSEKWLKAPLPADLGA" FT gene 19942..20610 FT /locus_tag="YP516_0906" FT CDS 19942..20610 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_0906" FT /product="putative amino acid ABC transporter, permease FT protein" FT /note="GO_component: GO:0016020 - membrane; GO_component: FT GO:0016021 - integral to membrane; GO_component: GO:0009276 FT - 1-2nm peptidoglycan-based cell wall; GO_function: FT GO:0005215 - transporter activity; GO_process: GO:0006810 - FT transport" FT /db_xref="InterPro:IPR010065" FT /db_xref="UniProtKB/TrEMBL:Q1CLF8" FT /protein_id="EEO77247.1" FT /translation="MTYQLNFAALWPYLPELLSGLLTTIELTVMATIGGIALGICGAAI FT RCGNTVILRRLWGGYVEIVRNTPFVVQLFFIVFGLPALGLKLSAGQAALLAMTINLGAY FT STEIIRSGIQASAKGQWEAARVLGLSRSQTFFRVILPPSLQRIYPALVSQCIIVMLGSA FT VVSQVSFEELTFAANLIQSRTFLSFEVYLVTTLLYLLFAIVMRQLLLAAGRRYFGSHAS FT " FT gene 20607..21260 FT /locus_tag="YP516_0907" FT CDS 20607..21260 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_0907" FT /product="putative amino acid ABC transporter, permease FT protein" FT /note="GO_component: GO:0016020 - membrane; GO_component: FT GO:0016021 - integral to membrane; GO_component: GO:0009276 FT - 1-2nm peptidoglycan-based cell wall; GO_function: FT GO:0005215 - transporter activity; GO_process: GO:0006810 - FT transport" FT /db_xref="InterPro:IPR010065" FT /db_xref="UniProtKB/TrEMBL:Q1CLF7" FT /protein_id="EEO77248.1" FT /translation="MTFTDWDIIRNLLLAARWTLLLSLTAFFGGTLVTLPLMLMRLSHW FT RWAARVVRLYTELFQGTPLLMQLFLAFFGLALFGIDVSPWTAAAMALTLFTSAFLVDIW FT CGSIAALPKGQWEASRCLGLSFHQTLFRVIAPQAMRIAIAPTVGFSVQVIKGTALASII FT GFVELTKAGTMLNNVTYQPFKVFGLVALGYFLMCYPLSRYSHYLEKKFHAIDHH" FT gene 21241..21987 FT /locus_tag="YP516_0908" FT CDS 21241..21987 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_0908" FT /product="putative amino acid ABC transporter, ATP-binding FT protein" FT /note="GO_function: GO:0017111 - nucleoside-triphosphatase FT activity; GO_function: GO:0000166 - nucleotide binding; FT GO_function: GO:0016887 - ATPase activity; GO_function: FT GO:0005524 - ATP binding" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:Q1CLF6" FT /protein_id="EEO77249.1" FT /translation="MPLITINQVQKYYGKNHVLKGVDLDIEIGEVISIIGRSGSGKSTL FT LRCMNGLEDYQDGSIKLGGMTVTNRDSQAREISRSVGMVFQNFNLFPHMTALENVMLAP FT RRVLKKGAIECRELAAQMLEKVGLADRVDYYPANLSGGQQQRVAIARALAMEPKVLLCD FT EITSALDPELVGEVLKVLEQLAAEGMTLILVTHEMNFAREVGDRVVFMHQGRVWEQGES FT RALFADPQTRELKQFISSVRGLSGPA" FT gene 22019..23362 FT /locus_tag="YP516_0909" FT CDS 22019..23362 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_0909" FT /product="Serine--pyruvate aminotransferase FT /L-alanine:glyoxylate aminotransferase" FT /EC_number="2.6.1.44" FT /EC_number="2.6.1.51" FT /note="GO_function: GO:0030170 - pyridoxal phosphate FT binding; GO_function: GO:0003824 - catalytic activity; FT GO_function: GO:0004760 - serine-pyruvate transaminase FT activity; GO_function: GO:0008453 - alanine-glyoxylate FT transaminase activity; GO_process: GO:0008152 - metabolic FT process" FT /db_xref="InterPro:IPR015421" FT /db_xref="UniProtKB/TrEMBL:Q1CLF5" FT /protein_id="EEO77250.1" FT /translation="MSEINPNPLFRQINPPARLLMGPGPINADPRVLRAMSSQLIGQYD FT PAMTDYMNQVMALYRGVFRTENRWTMLIDGTSRAGIEAILLSAIRPGDKVLIPVFGRFG FT YLLCEIARRCRAEVHIIEVPWGEVFSPDRIEDAIKHIRPRLLLTVQGDTSTTMLQPLAE FT LGDICRRHQVLFYTDATASLGGNPLETDAWGLDAVSAGLQKCLGGPSGSSPITLSPQFA FT EQIRRRKCIEQGIRTSDHADGDEEMIYSNYFDLGMIMDYWGPERLNHHTEATSMLFAAR FT ECARVILEEGLDHGIARHALHGSALLAGIQGMGLSVFGDRKHRMNNVLGVVIPKGIPGE FT QVRQLLLNDFGIEIGTSFGPLNGKIWRIGTMGYNARKDCVMQTLVALEAVLNRLGFTTV FT QGAGLQATWDVYQVDSAHQVDSAHQVDSTHQADSAQRNSDHAQLNGAN" FT gene 23362..24645 FT /locus_tag="YP516_0910" FT CDS 23362..24645 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_0910" FT /product="putative amino acid hydrolase" FT /EC_number="3.5.1.87" FT /note="GO_function: GO:0046983 - protein dimerization FT activity; GO_function: GO:0016787 - hydrolase activity; FT GO_function: GO:0008237 - metallopeptidase activity; FT GO_process: GO:0008152 - metabolic process; GO_process: FT GO:0006508 - proteolysis" FT /db_xref="InterPro:IPR010158" FT /db_xref="UniProtKB/TrEMBL:Q1CLF4" FT /protein_id="EEO77251.1" FT /translation="MSVTLPDIEAEQAALQVLARCDVLAAISESPEGLTRVYLSPEHLR FT ANRQVGEWMQAVGMQVWQDTVGNICGRYEGRQPDAPAILLGSHLDTVRNAGRYDGMLGV FT LTALEVVGYLHRHQQRLPVAIEVIGFADEEGTRFGITLLGSKGVTGRWPVEWLNTTDAD FT GISVAQAMVRAGLDPMDIGQSARAANAFCAYLELHIEQGPCLENAGLALGVVTDINGAR FT RLQCQFTGLAGHAGTVPMGQRQDALAGAAEWMCVVEALTAAQGEHLVATVGTLTCLPGA FT VNVIPGQVRLTLDIRGPNDRGVNDLLTRLLAEAEAIATRRGITFAAEGFYRIKATACDS FT ALQQCISQSISQVQGRCLALPSGAGHDAIAMAECWPVGMLFVRCKGGVSHHPDESVTSS FT DVAVAIQAYLEAVLTSPSSPSSLTPQRC" FT gene 24800..25000 FT /locus_tag="YP516_0911" FT CDS 24800..25000 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_0911" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C4GQB1" FT /protein_id="EEO77252.1" FT /translation="MASKLIASSLRLRLLTNPDDAILNGEDRQRSKASAPRMARLEPTW FT MYLRRLYDLPVLSVAGTLSIT" FT gene complement(25419..25532) FT /locus_tag="YP516_0912" FT CDS complement(25419..25532) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_0912" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C4GQB2" FT /protein_id="EEO77253.1" FT /translation="MPSQVYGKQQFEIDIKKFIKNDGKSKGVIIFTYKSIV" FT gene complement(25641..25754) FT /locus_tag="YP516_0913" FT CDS complement(25641..25754) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_0913" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C4GQB3" FT /protein_id="EEO77254.1" FT /translation="MAIAISHKETPNKNRGNASKNNNKYYYLALAHTVIIN" FT gene 25734..27524 FT /gene="hxuB" FT /locus_tag="YP516_0914" FT CDS 25734..27524 FT /codon_start=1 FT /transl_table=11 FT /gene="hxuB" FT /locus_tag="YP516_0914" FT /product="putative surface-exposed protein" FT /db_xref="InterPro:IPR013686" FT /db_xref="UniProtKB/TrEMBL:Q1CLF3" FT /protein_id="EEO77255.1" FT /translation="MRDCYCHGMLWFPLKFSLLALFSLSCSPLIATPQVLNVPNAGAIS FT NEIRQTTIEPLNAPEETDIKLPQLNKPTPPEGGLATERITLHRVRFEGDVSLFQPGITA FT DNKDLQALITPWLNRSLTFNDLQAMTFAVTRFYRKKGWVAAQAILPPQTIRDGIIVVRV FT IAGRLDKPQINNQSSLNSHFITTVIESNSCSKKNGIFGDKDCAASPVELSRLERTALIL FT NEIPGVEASLALKPGTQSGMTRIYADVTPGKKMMAYLAADNQGNDYSGHNRLLTGGVLN FT NLTGWGDQLRADLILSSSADVFNGLLDYNFPINSYGTRAALNYSYLDYTLTGPFSVLDA FT RGHSTTWGINLRHPWIRTSAARIDVNAGYYQARMRDALILLPEQKRNLNAGEFGISGTF FT TALPRGLSNFNLLGTAGDLALDDEYSQSINTLTHVSGNFSRFNYRVGHDQGIGSHVSFF FT NQFTGQMASKNLDSSQKLLLGGPLAVRAYGIGDGSVDKGTIFTTELRTRWQPDFPDWAG FT YGHQITVAAFFDQGWGAYYRQPIVGLSENNINISGFGSYITFARPADYFLNLTWAHRTG FT QAVTRHQDNDQLWLSAYKMF" FT gene 27565..28725 FT /locus_tag="YP516_0915" FT CDS 27565..28725 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_0915" FT /product="putative adhesin" FT /note="overlaps CDS with the same product name; FT GO_function: GO:0005488 - binding" FT /db_xref="InterPro:IPR008638" FT /db_xref="UniProtKB/TrEMBL:Q1CLF2" FT /protein_id="EEO77256.1" FT /translation="MNSKLYKLIFCRRLGCLIAVGEFTRSYGRAFSSKGGQAGNNQRRA FT VGILSRLAMMTGLALGIFPLLVLAHPVLPVNGHVVIGQGMLDQQSSTLTVTQQTDKLAI FT NWDSFDIAHGHSVIYAQPGSQSIALNQVQGQSASQIYGRLQANGQVFLLNPRGILFGKE FT AQVNVGGLVASTKYMSNPEFLSGDYRLIGGESEGNIINQANLRSAPGGYIALVGNRIDN FT QRSGSITTPQGNTVLAVGHSVTLNLDHGNLLGVQIQGETVAALIQNGGLIQADGGVIQL FT TAKGKDMLMDTVIDNTGILQAKGLSAKNGAIYLDGGGEGVVSQMGTIDVNNQQGRGGRA FT VVEGKRIYLNKNSNIKAKGTAGGGTVLVGGGAGKAKIIRSEMPRLW" FT gene 28719..33299 FT /locus_tag="YP516_0916" FT CDS 28719..33299 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_0916" FT /product="putative adhesin" FT /note="overlaps CDS with the same product name" FT /db_xref="UniProtKB/TrEMBL:C4GQB6" FT /protein_id="EEO77257.1" FT /translation="MVMDKGSDIDVSASRNGPGGSAVLWSEDYTGFHGNIRARGGPQSG FT DGGQVETSSQRNLQAFGQVDASAVRGSAGYWLLDPAEVTIVSSGAESGVMTKVGNIPAE FT FFSSAHIFIPTANITQILNSSINTQLNSGTNVTITTSNSSLTGCQWCNITVQADITKTA FT GADATLTLQADGNIVVNNNITADAGKLNLNLLAGNTTADSAITLNNSKVLLNGGDFLAK FT HANDNNTARIGLLGGRYDVGNFTLDGNTALASQVGVNISNAANISVAGETVISGVSSNS FT RGQGWRGIDISNNSILTGVGNMTFSIGSNSNVSWMGAFTNATITSDKNIIFQGTGSSSG FT GVDFVNSRILSKSGRVLFDINGNIVVKNVYGLRVNNSQLSAKDVKFAVNVTGVDGFLLR FT DSHVTATSGDINANANTINKGIWISGKTNLNASGNVNLHGVTTNSAYAGADAIKISGNS FT SSNNVNITAGGHISLIAVNGGKEIGSTVSVDYANIIAKNGDFNLNITGMKGSPFNNATI FT TANNISMNGNITANDAVLMTNTFLTAKGDIKTDLTSPTKGLWFRGNGGMTAANNILLVA FT NSTSSGETVKINASSSNKMNITAGKDISIIAGNSKTATGPNINIENVNIETNNGNFTTN FT GITSTWLSGVNVSANGVDITSNSTGTGGIVLDNTNILTTVGDINTIVTNSSGKGIWIKS FT NSTLNSNKDITLVGVSAGQNEGVIIQGSSDASRNNISAQGNITLIGKMGNGSGQHSLIN FT LGNVSLTSSGRNIDINGSSAGTGDVYFTNVELNATAGNVSIYAETKTALSTSLNAVLSL FT GGNNSIKAQNGWLIGKAFNTTQGAGIGFRANSSLSVDGNIILKGETEGVGATRKGIDFY FT GANTLNIIKGSQLSLLGENKGAQDTAGGNGISYTSPAKLTVNNNGSLKMEGRSTSGTGI FT NFPSSNNTLVFNGDGDTLIKGSSVAGTGAAISGVVNNSTGPMTIEGISTDGAGVHLFSA FT EHRIDRINVTGSSTHAEGLRISGNAAIVDTTLTGKSINGSGVKIDSLPGSSVVTRSVLD FT NATLNGSSSSGKGVEITSDINGIHHSSINGTTTGTGYGIDIGENSNVTGTSEADLLILQ FT GVATTGTGTGIKLNGNNDLSNTSLNSSAVDGIALDITGPLANQGNVILNGTASGSGIGA FT QVNGSLSDSVVNGTSTNGIGVQINGSLKNSRINGISANGSGVKIDGESTLDNATLNGNS FT TEGKGVDLAANLSGNHGSVVHGDTVHGTGIDVGKDVTLSGGGTDEPLTVSGNASGEKGT FT GVQLGGNNTLDNTTLSGNATDGHGVEINSRLINNGNTTINGKTSDDGHGVHINGAISGG FT EINGHSDNSHGVFLDESALLNDIVIGGGTGSYKLPVFIALPETIGERVTLNGKPIDKTQ FT PEGSKAREGDNLTRGKYTPLPPATDPELPPASTDEEKNTKQTSTLTPSQKREDPDMLIM FT ARNHILSTLEGRDLSSSVVTESEQSAAGVTGIMVCLPLSETSEHEPCDTYILDKGQPHL FT PMMVKK" FT gene 33454..35307 FT /gene="hmwC" FT /locus_tag="YP516_0917" FT CDS 33454..35307 FT /codon_start=1 FT /transl_table=11 FT /gene="hmwC" FT /locus_tag="YP516_0917" FT /product="putative accessory processing protein" FT /note="GO_component: GO:0016021 - integral to membrane; FT GO_function: GO:0001584 - rhodopsin-like receptor activity; FT GO_process: GO:0007186 - G-protein coupled receptor protein FT signaling pathway" FT /db_xref="InterPro:IPR000276" FT /db_xref="UniProtKB/TrEMBL:Q1CLF0" FT /protein_id="EEO77258.1" FT /translation="MADKSVELTPVVEAPVVFSLPYFEFLVCTRRYEDAGRLLILMLEK FT LDTQYGRWDVFSLNKQPIQQQEYYCNRLAAAIGCLFSDPGFVISETGFLQLINFHRWIA FT LIFAASTFGHADHVITNLNEAGNGCSHPLRFERNNFLKFCVMYLPESGIPLQPDILWQF FT NPQATAALFLALLSPRILPSAAGHEKRETLLAWLPEKLLTLISLEGLPERILHDVYMHC FT SYADMAKKHTIKRSINFHLRKTMLKNGLSDMNELPPLRSKPLMLVILEWFNSGHSIYRT FT HSSTLRAARDQFSTHGVAIAEATDDITRKVFDDFTEVSRTGAVETIMALAQQLRPDVIY FT FPSVGMFPMTVALTNLRLAPLQVMALGHPATTHSDYIDAVLVEEDYLGDIACFSEKVVS FT LPKDCLPYVPPANITQPEPIQQFVQREAVHIAVCASAMKINPRFLAACAEIALRSPLPI FT IFHFLVGFCWGITHRVMEKAVNEMVTSAKVYEHLNYQNYLQVINQCDLFINPFPFGNTN FT GIVDTVRQGLPGVCLSGEEVHEHIDEGLFRRLGLAEELITHNVEQYITATVRLITDTNW FT RNGLRRQLLQTQPDNVLFTGKPEQFGQIVRALLDNGHQDVN" FT gene 35309..36055 FT /locus_tag="YP516_0918" FT CDS 35309..36055 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_0918" FT /product="hypothetical protein" FT /note="GO_component: GO:0005737 - cytoplasm; GO_process: FT GO:0006355 - regulation of transcription, DNA-dependent" FT /db_xref="InterPro:IPR004356" FT /db_xref="UniProtKB/TrEMBL:Q1CLE9" FT /protein_id="EEO77259.1" FT /translation="MLKWQATTACEDPAEGEELHRLVADIPIGILQHITLRRQFWRTAC FT AIYLLGCGFSLSDVSNRMLWDENLIDKNVRATLQRLLGAQGLRLLLMGRITQSEISQIL FT RQTALRLLYFSHYYESDAVASYLQQGQSLLSASAQCSPCELFQGRISPGEVDEVQLTLL FT MDIAKVTKISLRAALHRHLVEGATEEWVCSVYKMNQEDFWQNMRKLHRLNERVVQLLPF FT YTRQTSSCMCVGCPRSPQPLTDVSSS" FT gene complement(36227..38674) FT /gene="fadE" FT /locus_tag="YP516_0919" FT /note="similar to fadF, yafH" FT CDS complement(36227..38674) FT /codon_start=1 FT /transl_table=11 FT /gene="fadE" FT /locus_tag="YP516_0919" FT /product="medium-long-chain fatty acyl-CoA dehydrogenase" FT /EC_number="1.3.99.-" FT /EC_number="1.3.99.2" FT /note="GO_function: GO:0016491 - oxidoreductase activity; FT GO_function: GO:0003995 - acyl-CoA dehydrogenase activity; FT GO_function: GO:0050660 - FAD binding; GO_function: FT GO:0016627 - oxidoreductase activity, acting on the CH-CH FT group of donors; GO_function: GO:0004085 - butyryl-CoA FT dehydrogenase activity; GO_process: GO:0006118 - electron FT transport; GO_process: GO:0008152 - metabolic process" FT /db_xref="InterPro:IPR015396" FT /db_xref="UniProtKB/TrEMBL:Q1CLE8" FT /protein_id="EEO77260.1" FT /translation="MIVLSIIALLVLISVLFYHRVNLYLSSLILLVYTAALSASQLWSF FT WVLLPLVIMLLPLILTPLRKSLFSAPALRIFRSVMPAMSRTEKEAIDAGTTWWEGDLFR FT GAPDWKKLHNYPKPQLTAEEQAFIDGPVEEACRMANDFQITHELADLPPELWDYLKEKR FT FFAMIIKKEYGGLEFSAYAQARVLQKLAGVSGILAITVGVPNSLGPGELLQHYGTEEQK FT NHYLPRLARGDEIPCFALTSPEAGSDAGAIPDVGIVCMGEWQGKQVLGMRLTWNKRYIT FT LAPIATVLGLAFKLSDPEHLLGDTVDLGITCALIPTHTPGVEIGHRHFPLNIPFQNGPT FT RGNDIFVPIDYIIGGPQMAGQGWRMLVECLSVGRGITLPSNATGSLKSVAMGIGAYAYI FT RRQFKISIGKMEGIEEPLARIAGNTYVMDAAATLITSGIMMGEKPAVLSAIVKYHCTHR FT GQRAVMDAMDIAGGKGICLGPANFVARGYQGAPIGITVEGANILTRSMIIFGQGAIRCH FT PFVLDEMAAAQSNDVAAFDKALFGHLGHVGSSMVRSFWLGLTNGRTSATPVKDSTRRYY FT QQLNRLSANLALLSDVSMGVLGGSLKRRERISARLGDILSQLYLASATLKRYEDEGRQK FT EDLPLVHWGVQDALYQAEQALDDLLRNFPNSVIAGLMRVVVFPLGRVHRAPSDHLDHQL FT AQLLQVPSATRSRIGRGQYLTPSEFNPVGLLEAALLDVIAAEPIHKRLSKEAGKSLPFT FT RLDQLAKHALAEGKISAEEAALLTKAENSRLRSINVDEFDASALAANPVVKKPAKQQQT FT EAA" FT gene 38914..39495 FT /gene="gmhA" FT /locus_tag="YP516_0920" FT /note="similar to lpcA, tfrA" FT CDS 38914..39495 FT /codon_start=1 FT /transl_table=11 FT /gene="gmhA" FT /locus_tag="YP516_0920" FT /product="D-sedoheptulose 7-phosphate isomerase" FT /EC_number="5.3.1.-" FT /note="GO_component: GO:0005737 - cytoplasm; GO_function: FT GO:0008968 - phosphoheptose isomerase activity; FT GO_function: GO:0005529 - sugar binding; GO_process: FT GO:0009244 - lipopolysaccharide core region biosynthetic FT process; GO_process: GO:0005975 - carbohydrate metabolic FT process" FT /db_xref="InterPro:IPR001347" FT /db_xref="UniProtKB/Swiss-Prot:Q1CLE7" FT /protein_id="EEO77261.1" FT /translation="MYHDLIRSELNEAADTLANFLKDDSNIDAIQRAAILLADSFKAGG FT KVLSCGNGGSHCDAMHFAEELTGRYRENRPGYPAIAISDVSHLSCVSNDFGYDYVFSRY FT VEAVGREGDVLLGISTSGNSGNIIKAIEAARAKGMKVITLTGKDGGKMAGSADIEIRVP FT HFGYADRIQEIHIKVIHILIQLIEKEMVKA" FT gene 39698..40471 FT /gene="yafJ" FT /locus_tag="YP516_0921" FT CDS 39698..40471 FT /codon_start=1 FT /transl_table=11 FT /gene="yafJ" FT /locus_tag="YP516_0921" FT /product="predicted amidotransfease" FT /note="GO_process: GO:0008152 - metabolic process" FT /db_xref="InterPro:IPR017932" FT /db_xref="UniProtKB/TrEMBL:Q1CLE6" FT /protein_id="EEO77262.1" FT /translation="MCELLGMSANVPTDICFSFTGLVQRGGGTGPHKDGWGITFYEGNG FT CRTFKDPQPSFNSPIARLVQDYPIKSCAVVSHIRQANRGEVALENTHPFTREMWGRNWT FT YAHNGQLKGYRQLDTGTFRPIGQTDSEYAFCWLLNQLAKRYPRTPGNWPAVFRFIASLS FT EQLRAKGVFNMLLSDGRFVMAYCSTNLYWITRRAPFGKATLLDQDVEIDFQQQTTPKDV FT VTVIATQPLTGNETWHKIAPGEFALFCLGERVGFN" FT gene complement(40436..41098) FT /locus_tag="YP516_0922" FT CDS complement(40436..41098) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_0922" FT /product="putative exported protein precursor" FT /db_xref="InterPro:IPR005490" FT /db_xref="UniProtKB/TrEMBL:Q1CLE5" FT /protein_id="EEO77263.1" FT /translation="MAVSKELKQQLLGSSVYIQIFKEERVLELYAKLQGEYRLVQSYPI FT CEFSGGLGPKRREGDFKSPEGFYRINTRHLKPDSQFYRAINIGFPNDYDKSQGYSGKYL FT MIHGACKSIGCYAMTDAYMDEIFNYVRTAFIFGQEKVDISIYPFRMTEQNIQRHRNSSY FT SNFWRQLQPGYTYFAKNRMPPPVSVSNGQYVLSPPPLTSTPTSQLALIKTDPLTKTE" FT gene complement(41399..41578) FT /locus_tag="YP516_0923" FT CDS complement(41399..41578) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_0923" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q1CLE4" FT /protein_id="EEO77264.1" FT /translation="MQYWIVRESCALTERELKFNADTRTQYVRVKIAETAITQAGHQLR FT VILAFSADTVWQMQ" FT gene 41680..43023 FT /gene="nqrA" FT /locus_tag="YP516_0924" FT /note="similar to nqr1" FT CDS 41680..43023 FT /codon_start=1 FT /transl_table=11 FT /gene="nqrA" FT /locus_tag="YP516_0924" FT /product="NADH-ubiquinone oxidoreductase subunit A" FT /note="GO_function: GO:0016655 - oxidoreductase activity, FT acting on NADH or NADPH, quinone or similar compound as FT acceptor; GO_process: GO:0006814 - sodium ion transport" FT /db_xref="UniProtKB/TrEMBL:C4GQC4" FT /protein_id="EEO77265.1" FT /translation="MIKIKKGLDLPIAGAPVQTIQDGPAIHHVALLGEEYVGMRPSMLV FT QEGDQVKKGQALFEDKKNPGVLFTAPASGKISAINRGERRVLQSVVIEVEGDEQIPFEH FT YAAEELNQLSDEQVQHHLLTSGLWTALRTRPFSKTPVPGSRPRAIFISAMDTQPLAADP FT QVIIATESEAFNHGLTVLTRLTDGKVHVCHAAGQAVTRHTNTQVTYNEFSGPHPAGLVG FT THIHFLEPVSQTKMVWHVGYQDVIAIGKLFTRGELCTDRIVALAGPQVNQPILLRTRLG FT ASLSELTAGKLKEGDNRIISGSVLSGTAFSATHGYLGRFHQQVSVIREGREKELFGWVM FT PGRDKYSITRTTLGHFFKRKLFAFSTDMHGGERAMVPIGNYERVMPLDILATHLLRDLL FT AGDTDSAQALGCLELDEEDLALCTFVCPGKYEYGPVLRDILTQIEQEG" FT gene 43027..44268 FT /gene="nqrB" FT /locus_tag="YP516_0925" FT /note="similar to nqr2" FT CDS 43027..44268 FT /codon_start=1 FT /transl_table=11 FT /gene="nqrB" FT /locus_tag="YP516_0925" FT /product="NADH-ubiquinone oxidoreductase subunit B" FT /note="GO_component: GO:0016021 - integral to membrane; FT GO_component: GO:0009276 - 1-2nm peptidoglycan-based cell FT wall; GO_component: GO:0016020 - membrane; GO_component: FT GO:0005971 - ribonucleoside-diphosphate reductase complex; FT GO_function: GO:0016655 - oxidoreductase activity, acting FT on NADH or NADPH, quinone or similar compound as acceptor; FT GO_function: GO:0010181 - FMN binding; GO_function: FT GO:0004748 - ribonucleoside-diphosphate reductase activity; FT GO_process: GO:0006118 - electron transport; GO_process: FT GO:0006810 - transport; GO_process: GO:0006260 - DNA FT replication" FT /db_xref="InterPro:IPR010966" FT /db_xref="UniProtKB/TrEMBL:Q1CLE2" FT /protein_id="EEO77266.1" FT /translation="MGLKNFLEKIEHHFEAGGKLEKYYPLYEAAATIFYTQGKVTPGAS FT HVRDAIDLKRMMILVWFAVFPAMFWGMYNVGYQAIPALNQLYSGAELQQVIAGDWHYRL FT AQMLGASLTPDAGWASKMLLGAAYFLPIYAVVFLVGGFWEVVFSIVRKHEINEGFFVTS FT ILFSLIVPPTLPLWQAALGISFGVVIGKEIFGGTGRNFLNPALAGRAFLFFAYPAQISG FT DLVWTSADGFSGATPLSQWSVNGSHSLVNTVSGQPITWMDAFLGYIPGSIGEVSTLMIL FT IGGAIIIFGRVASWRIVAGVMIGMIATAYLFNWIGSTTNPLFAMPWYWHLVLGGFAFGM FT IFMATDPVSASFTNKGKWWYGGLIGVMCILIRVANPAYPEGMMLAILFANLFAPLFDYV FT VVQANIKRRKARGE" FT gene 44258..45058 FT /gene="nqrC" FT /locus_tag="YP516_0926" FT /note="similar to nqr3" FT CDS 44258..45058 FT /codon_start=1 FT /transl_table=11 FT /gene="nqrC" FT /locus_tag="YP516_0926" FT /product="Na+-translocating NADH-quinone reductase subunit FT C" FT /note="GO_component: GO:0016021 - integral to membrane; FT GO_component: GO:0009276 - 1-2nm peptidoglycan-based cell FT wall; GO_component: GO:0016020 - membrane; GO_function: FT GO:0016655 - oxidoreductase activity, acting on NADH or FT NADPH, quinone or similar compound as acceptor; FT GO_function: GO:0010181 - FMN binding; GO_process: FT GO:0006814 - sodium ion transport" FT /db_xref="InterPro:IPR010204" FT /db_xref="UniProtKB/TrEMBL:Q1CLE1" FT /protein_id="EEO77267.1" FT /translation="MASDKPRNNDSIGKTLLVVVILCLVCSVVVAGAAVGLKAKQQEQR FT LLDKQRNILAVAGLLQPRMLAEEVQQAFATRIEPRLLDLQSGEFLKQDPATFDRSQALR FT DNQMSIALTPAQDIAGIRRRANVVEIYLVRGDGGQINKVILPIYGSGLWSMMYAFVAID FT TDGKTVRGITYYDHGETPGLGGEIENPIWRNQWIGKRLFDDQGQPAIRIVKGRAPANDP FT HAVDGLSGATLTSNGVQNSFNFWLGENGFGPFLKKVREGALKNG" FT gene 45051..45680 FT /gene="nqrD" FT /locus_tag="YP516_0927" FT /note="similar to nqr4" FT CDS 45051..45680 FT /codon_start=1 FT /transl_table=11 FT /gene="nqrD" FT /locus_tag="YP516_0927" FT /product="Na+-translocating NADH-quinone reductase subunit FT D" FT /note="GO_component: GO:0016020 - membrane; GO_component: FT GO:0009276 - 1-2nm peptidoglycan-based cell wall; FT GO_function: GO:0016655 - oxidoreductase activity, acting FT on NADH or NADPH, quinone or similar compound as acceptor; FT GO_process: GO:0006118 - electron transport" FT /db_xref="InterPro:IPR011292" FT /db_xref="UniProtKB/Swiss-Prot:Q1CLE0" FT /protein_id="EEO77268.1" FT /translation="MADSKEIKRVLLSPLFDNNPIALQILGVCSALAVTTKLETALVMT FT LAVTLVTAFSSFFISLIRNHIPNSVRIIVQMVIIASLVIVVDQVLRAYAYEISKQLSVF FT VGLIITNCIVMGRAEAYAMKSPPIESFMDGIGNGLGYGVILVLVGFVRELVGSGKLFGV FT TVLETVQNGGWYLPNGLFLLAPSAFFIIGLLIWGLRTLKPAQIEKE" FT gene 45687..46283 FT /gene="nqrE" FT /locus_tag="YP516_0928" FT /note="similar to nqr5" FT CDS 45687..46283 FT /codon_start=1 FT /transl_table=11 FT /gene="nqrE" FT /locus_tag="YP516_0928" FT /product="Na+-translocating NADH-quinone reductase subunit FT E" FT /note="GO_component: GO:0016020 - membrane; GO_component: FT GO:0016021 - integral to membrane; GO_component: GO:0009276 FT - 1-2nm peptidoglycan-based cell wall; GO_function: FT GO:0016655 - oxidoreductase activity, acting on NADH or FT NADPH, quinone or similar compound as acceptor; GO_process: FT GO:0006814 - sodium ion transport; GO_process: GO:0006118 - FT electron transport" FT /db_xref="InterPro:IPR010967" FT /db_xref="UniProtKB/Swiss-Prot:Q1CLD9" FT /protein_id="EEO77269.1" FT /translation="MEHYISLLVRAVFVENMALAFFLGMCTFLAVSKKVSTAFGLGIAV FT TVVLGISVPANNLVYNLVLRDGALVEGVDLSFLNFITFIGVIAAIVQVLEMILDRYFPA FT LYNALGIFLPLITVNCAIFGGVSFMAQRDYNFPESIVYGFGSGMGWMLAIVALAGIREK FT MKYANVPAGLQGLGITFISTGLMALGFMSFAGVNL" FT gene 46299..47522 FT /gene="nqrF" FT /locus_tag="YP516_0929" FT /note="similar to nqr6" FT CDS 46299..47522 FT /codon_start=1 FT /transl_table=11 FT /gene="nqrF" FT /locus_tag="YP516_0929" FT /product="Na(+)-translocating NADH-quinone reductase FT subunit F" FT /EC_number="1.6.5.-" FT /note="GO_component: GO:0016021 - integral to membrane; FT GO_component: GO:0009276 - 1-2nm peptidoglycan-based cell FT wall; GO_function: GO:0050660 - FAD binding; GO_function: FT GO:0016491 - oxidoreductase activity; GO_function: FT GO:0051536 - iron-sulfur cluster binding; GO_function: FT GO:0009055 - electron carrier activity; GO_function: FT GO:0051537 - 2 iron, 2 sulfur cluster binding; GO_function: FT GO:0016655 - oxidoreductase activity, acting on NADH or FT NADPH, quinone or similar compound as acceptor; FT GO_function: GO:0005506 - iron ion binding; GO_process: FT GO:0006118 - electron transport; GO_process: GO:0006814 - FT sodium ion transport" FT /db_xref="InterPro:IPR001433" FT /db_xref="UniProtKB/Swiss-Prot:Q1CLD8" FT /protein_id="EEO77270.1" FT /translation="MEIILGVVMFTLIVLALTVMILFAKSKLVNTGDITVEINEDEDKS FT FTAPAGDKLLNMLSSHGIFVSSACGGGGSCGQCRVTIKEGGGDILPTELSHISKREAKE FT GCRLACQVNVKQNLKIELPEEIFGVKKWTCEVISNDNKATFIKELKLKIPDGDVVPFRA FT GGFIQIEAEPHTVKYADFDVPTEYRGDWDKFNLFRFESVVTEPTVRAYSMANYPEEHGI FT ILLNVRIATPPPSVPDAPPGIMSSYIWSLKPGDKVVISGPFGEFFAKDTDAEMVFIGGG FT AGMAPMRSHIFDQLKRLHSKRKISFWYGARSRREMFYEEDFDQLQAENDNFRWHVALSD FT PQPEDNWTGYTGFIHNVLLENYLKDHPAPEDCEFYMCGPPMMNAAVIKMLKDLGVEDEN FT IMLDDFGG" FT gene 47563..48585 FT /gene="apbE" FT /locus_tag="YP516_0930" FT /note="similar to yojL" FT CDS 47563..48585 FT /codon_start=1 FT /transl_table=11 FT /gene="apbE" FT /locus_tag="YP516_0930" FT /product="predicted thiamine biosynthesis lipoprotein" FT /note="GO_process: GO:0009228 - thiamin biosynthetic FT process" FT /db_xref="UniProtKB/TrEMBL:C4GQD0" FT /protein_id="EEO77271.1" FT /translation="MRKYITRCLMLVIGGLLLSGCGPEQVSLEGKTMGTSYSIKYVSDS FT STAAPETLQQEIDLILEEVNDQMSTYRPHSELSRFNQSREVNQPFPVSAATAKVVQEAI FT RINRLTDGALDVTVGPLVNLWGFGPEGRPDTVPTEDEITRRRAWVGIDKLAVDKNALIK FT RVPELYVDLSSIAKGYGVDVVAEYLEAQNIKDYMVDIGGEVRTRGNNGENKPWRIAIEK FT PVAGSTQRAQEIIEPGRMAVATSGDYRNYFEQDGIRYSHTIDPDTGRPINHRLVSITVL FT DPSCMTADGLSTGLGVLGPERGMALANLLGIPVLMIIKTDDGFEEQYSDAFKPYLQVKH FT " FT gene 48598..48825 FT /locus_tag="YP516_0931" FT CDS 48598..48825 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_0931" FT /product="putative exported protein" FT /db_xref="InterPro:IPR007495" FT /db_xref="UniProtKB/TrEMBL:Q1CLD6" FT /protein_id="EEO77272.1" FT /translation="MLTVFIASFVFFLLAIAGMSLGYIVKNKTIQGSCGGIGALGMEKV FT CDCPEPCDSRKKRLAKEAARKKKLDQFRIL" FT gene complement(49069..50016) FT /locus_tag="YP516_0932" FT CDS complement(49069..50016) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_0932" FT /product="putative exported protein" FT /note="GO_function: GO:0008889 - glycerophosphodiester FT phosphodiesterase activity; GO_process: GO:0006071 - FT glycerol metabolic process" FT /db_xref="InterPro:IPR017946" FT /db_xref="UniProtKB/TrEMBL:Q1CLD5" FT /protein_id="EEO77273.1" FT /translation="MRNYIMTSLLLSSTFTAIAHSSPLPAPQIIAHRAGTADAPENTFP FT AISKALANGADAIWITLQLSKDNIPVLYRPSDLKELTNESGSVSAYTASQLAEIDASIA FT YNKKHDIKPSAGSLFGIPTLDDVLKKYPDTIFYLDIKSPDADPIVLAKALQKTLLATSK FT GEKNRLIRTRVYSTNDDYLNALDTVNKSSDPSHKVQRFESRDTTRTVLANITMDHQCEL FT PIDNKERWYGLELHRKVEVVEKYTLGEGRSSAILSWDKEAMDCFRKNANAHIILFGINT FT QDDYKKAKELQANGVMVDSPAQFKEIISKSENVK" FT gene 50372..51430 FT /gene="dinB" FT /locus_tag="YP516_0933" FT /note="similar to dinP" FT CDS 50372..51430 FT /codon_start=1 FT /transl_table=11 FT /gene="dinB" FT /locus_tag="YP516_0933" FT /product="DNA polymerase IV" FT /EC_number="2.7.7.7" FT /note="GO_function: GO:0003887 - DNA-directed DNA FT polymerase activity; GO_process: GO:0006281 - DNA repair" FT /db_xref="InterPro:IPR017963" FT /db_xref="UniProtKB/Swiss-Prot:Q1CLD4" FT /protein_id="EEO77274.1" FT /translation="MRKIIHVDMDCFFAAVEMRDDPRLRDIPLAIGGSKERRGVISTAN FT YPARRYGVRSAMPTAMAFKLCPQLTLLPGRMAAYKEASQHIREIFARYTPLIEPLSLDE FT AYLDVSDSLACGGSATLIAQEIRQSIASELNLTASAGIAPIKFLAKIASELNKPNGQYV FT ITPNQIQPFLQDLPLSKIPGVGAVTAKRLQALGLVTCGDIQKYPLAELLKHFGKFGRVL FT WERSHGIDEREISPDRLRKSVGVEKTLAEDIYDWESCEALIEELYLELETRLRKVKPSL FT HIARQGVKLKFHDFQQTTQEHTWPVLNKVDLLEIAHAAWHERRAERGVRLVGLHVTLLD FT PQLERQLLLDWG" FT gene complement(51544..53004) FT /gene="pepD" FT /locus_tag="YP516_0934" FT /note="similar to pepH" FT CDS complement(51544..53004) FT /codon_start=1 FT /transl_table=11 FT /gene="pepD" FT /locus_tag="YP516_0934" FT /product="aminoacyl-histidine dipeptidase (peptidase D)" FT /EC_number="3.4.13.3" FT /note="GO_function: GO:0008769 - X-His dipeptidase FT activity; GO_function: GO:0046983 - protein dimerization FT activity; GO_function: GO:0016787 - hydrolase activity; FT GO_function: GO:0008237 - metallopeptidase activity; FT GO_process: GO:0006508 - proteolysis" FT /db_xref="InterPro:IPR011650" FT /db_xref="UniProtKB/TrEMBL:Q1CLD3" FT /protein_id="EEO77275.1" FT /translation="MSELSQLSPQPLWDIFAKICSIPHPSYHEEALAQYIVTWAKEKGL FT HAERDQVGNILLRKPATKGMENRKPVALQAHLDMVPQKNNDTVHDFTKDPIQPYIDGEW FT VKARGTTLGADNGIGMASALAVLSDDRVEHGPLEVLLTMTEEAGMDGAFGLQPNWLKAD FT ILINTDSEQEGEIYMGCAGGIDFITTMPLQREAIPAGYQTLKLTIKGLKGGHSGADIHL FT GLGNANKLLARFLFEQAKDLDLRVLDLNGGTLRNAIPREGHVTLAVAADKVEQLKKLSQ FT NYLATLKDELIAVEKNLTLVLEPVSTETKALTKETQQRFVALLNATPNGVIRMSDAVKG FT VVETSLNVGVVTMNEHEAEIVCLIRSLIDSGKDYVASMLTAIGELAGAKTSPSGGYPGW FT QPDPTSPVMALVRETYQKLFNKTPNIMVIHAGLECGLFKKPYPNMDMVSIGPTMTGPHS FT PDEQVHIESVGQYWQLLTALLKAIPERT" FT gene 54879..55790 FT /locus_tag="YP516_0935" FT CDS 54879..55790 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_0935" FT /product="putative LysR-family transcriptional regulatory FT protein" FT /note="GO_function: GO:0003700 - transcription factor FT activity; GO_process: GO:0006355 - regulation of FT transcription, DNA-dependent" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q1CLD2" FT /protein_id="EEO77276.1" FT /translation="MLLLSKSLRYFIITAQKESITLAADKLCITASPLSRNIKELEMKL FT GCELFTRTSKGILLTSSGHFLYDKIIPVYNEIIELEKELISNHKLNVISEEKRLELNIG FT TDIFHYAHLLPIAKARFFNEENVNFSLEVSTSQDISQMLRENIYQVFFSQRVLPKEHGI FT IHRKLSDEFMMIALQDDMYRDDMSQEDIISSYPLVQYPRQNISSVVDELTNYLISRKLN FT PIRITLPNVNDHLSIINQGGAIGILPSSVKKLINMHNYNIKLIPFVHKGEKLKVKSNAY FT YLCDNKDVFEENILPLLGDSHL" FT gene complement(56250..57854) FT /locus_tag="YP516_0936" FT CDS complement(56250..57854) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_0936" FT /product="putative carbohydrate-binding protein" FT /note="GO_component: GO:0019028 - viral capsid" FT /db_xref="InterPro:IPR004302" FT /db_xref="UniProtKB/TrEMBL:Q1CLD1" FT /protein_id="EEO77277.1" FT /translation="MKLHFNAQLHRKPILWSMGGILASQLLVMLPVDKAEAHGAVGFPI FT ARQYQCQLEAGFWGDPANIPNSDCRQAIENPGDPSNPQLPFTQWNELSANPTNPSIQAT FT VELAVPNGLLCAGGDPRKAGLDNVPATKWRKTLITPDENGHMQLRWENTTAHNPAYMKV FT YITKPSYDSTKALRWEDLELLYADKAPTPTAGTGLSPSTNSFYFLNVPLNGHTGDAIIY FT SYWQREDAGNEGFFNCSDVNISEGSTPSFPWVNNSQFIVQGFTPAINDQIRFRVMGGSA FT KGVEVVDVYLPITAQNQAQTVWSKQLADKLNNTYPQYVRIGVRSGNDIVYNTANIATNI FT VWLQTGFSSAMSLISGTPEPEQPQPPVAQITAPSSVQDNETITLSASASTGQIASYQWE FT FQHFEPKVATTQNVTVRAVATQQPLAGKVTLTVTNNQGVQSRAEKTINILPSGGIEQEH FT PLWDRNKVTTYGEGTTVIGLDGQAWTCKPFPFTGWCAQTIPDYIQSNNWPYAPGSAAAA FT TLSEDSRPWLRTVRTHH" FT gene complement(58051..58356) FT /locus_tag="YP516_0937" FT CDS complement(58051..58356) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_0937" FT /product="putative membrane protein" FT /db_xref="UniProtKB/TrEMBL:C4GQD7" FT /protein_id="EEO77278.1" FT /translation="MQLKIPEPDSVVIWVVIGIFATWGGVVRLLLQDTKSKNLREKISA FT ISTQVIVSGFTGMLGGLISFEYGSSPYISFAMAGIFGSLGDTGLMYIQSYFIKKRR" FT gene 58685..58786 FT /locus_tag="YP516_0938" FT CDS 58685..58786 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_0938" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C4GQD8" FT /protein_id="EEO77279.1" FT /translation="MLVFMSLAHYNLAQPFFPFIMASHTFTGWDYTL" FT gene 58783..59241 FT /gene="gpt" FT /locus_tag="YP516_0939" FT /note="similar to gpp, gxu" FT CDS 58783..59241 FT /codon_start=1 FT /transl_table=11 FT /gene="gpt" FT /locus_tag="YP516_0939" FT /product="guanine-xanthine phosphoribosyltransferase" FT /EC_number="2.4.2.22" FT /note="GO_function: GO:0016740 - transferase activity; FT GO_function: GO:0000310 - xanthine FT phosphoribosyltransferase activity; GO_process: GO:0009116 FT - nucleoside metabolic process" FT /db_xref="InterPro:IPR000836" FT /db_xref="UniProtKB/Swiss-Prot:Q1CLD0" FT /protein_id="EEO77280.1" FT /translation="MNEKYVVTWDMLQIHARKLAQRLLPAEQWKGIIAVSRGGLVPAGI FT LARELGIRYVDTVCISSYDHDNQRDLKVLKRAEGDGEGFIVIDDLVDTGGTATAIREMY FT PKAHFVTIFAKPAGRPLVDDYVVDIPQNTWIEQPWDMAVTFVAPLSGK" FT gene 59368..60615 FT /gene="frsA" FT /locus_tag="YP516_0940" FT CDS 59368..60615 FT /codon_start=1 FT /transl_table=11 FT /gene="frsA" FT /locus_tag="YP516_0940" FT /product="fermentation/respiration switch protein" FT /EC_number="3.1.-.-" FT /db_xref="InterPro:IPR010520" FT /db_xref="UniProtKB/Swiss-Prot:Q1CLC9" FT /protein_id="EEO77281.1" FT /translation="MAQANLSEILFKPKFKHPETSTLVRRTHCNHVVNIHSALDGDTAN FT HWYRMINRLMWTWRGIDPLEIEEVLSRIACSKAEHSNNELLDTVVGYRNGNWIYEWANQ FT GMMWQQKAMEETDPGSAGQFWLNAANLYSIASYPHLKGDELSEQAEVLSNRAYEEAAKY FT LPYTLKELTFPISDGGSLSGFLHMPTVGSAPFPTVLMCGGLDTLQSDYHRLFRDYLEPK FT GIAMLTIDLPSVGASSRWKLTQDTSYLHQQVLQALADVPWVDHQRVSVFGFRFGANVAV FT RLGYLEPQRVRAVACLGPIVHHLLCNSDSLRKVPDMYMDVMASRLGMADSTDETLNTEM FT NRYSLKTQGLLGRRCQTPMLAGFWENDPFSPKEEAKLICSSSADGKLLAIPSKPLYENF FT HRALLQTSEWLEDKMR" FT gene 60675..61076 FT /gene="crl" FT /locus_tag="YP516_0941" FT CDS 60675..61076 FT /codon_start=1 FT /transl_table=11 FT /gene="crl" FT /locus_tag="YP516_0941" FT /product="DNA-binding transcriptional regulator" FT /db_xref="InterPro:IPR009986" FT /db_xref="UniProtKB/Swiss-Prot:Q1CLC8" FT /protein_id="EEO77282.1" FT /translation="MTLTSAHPKSKLMKRFAALGPYLREGQCQNDHFFFDCLAVCINVK FT LAPEKREFWGWWIELEPSAGRFTYVYQLGLFNKEGNWNAEKISDPEVQDKLESTLRSFH FT LRLEEMLASIDMKLEPAADFNDQPVKLSA" FT gene 61253..62356 FT /gene="proB" FT /locus_tag="YP516_0942" FT CDS 61253..62356 FT /codon_start=1 FT /transl_table=11 FT /gene="proB" FT /locus_tag="YP516_0942" FT /product="gamma-glutamate kinase" FT /EC_number="2.7.2.11" FT /note="GO_component: GO:0005737 - cytoplasm; GO_function: FT GO:0003723 - RNA binding; GO_function: GO:0004349 - FT glutamate 5-kinase activity; GO_process: GO:0008652 - amino FT acid biosynthetic process; GO_process: GO:0006561 - proline FT biosynthetic process" FT /db_xref="InterPro:IPR002478" FT /db_xref="UniProtKB/Swiss-Prot:Q1CLC7" FT /protein_id="EEO77283.1" FT /translation="MSGSQTLVVKLGTSVLTGGSRRLNRAHIVELVRQCAQQHAKGHRI FT VIVTSGAIAAGREHLGYPELPATIASKQLLAAVGQSRLIQLWEQLFSIYGIHIGQMLLT FT RADLEDRERFLNARDTMNALLDNRIVPVINENDAVATAEIKVGDNDNLSALAAILASAD FT KLLLLTDQAGLYTADPRNNPEAELIREVHGIDDVLRGMAGDSVSGLGTGGMATKLQAAD FT VACRAGIDVVIAAGSQVGVIADVIDGTPVGTRFHSLETPLENRKRWIFGAPPAGEITVD FT DGAVFAIMERGSSLLPKGIRSVKGDFSRGEVIRIRNLNGRDLAHGVSRYNSDALRMLAG FT HHSQQISEILGYEYGPVAVHRDDMIVS" FT gene 62366..63625 FT /gene="proA" FT /locus_tag="YP516_0943" FT CDS 62366..63625 FT /codon_start=1 FT /transl_table=11 FT /gene="proA" FT /locus_tag="YP516_0943" FT /product="gamma-glutamylphosphate reductase" FT /EC_number="1.2.1.41" FT /note="GO_function: GO:0050661 - NADP binding; GO_function: FT GO:0016491 - oxidoreductase activity; GO_function: FT GO:0004350 - glutamate-5-semialdehyde dehydrogenase FT activity; GO_process: GO:0008152 - metabolic process; FT GO_process: GO:0006561 - proline biosynthetic process" FT /db_xref="InterPro:IPR012134" FT /db_xref="UniProtKB/Swiss-Prot:Q1CLC6" FT /protein_id="EEO77284.1" FT /translation="MNLLEHMGKAAKQASWQLAMLSTAKKNQALAVIANLLESESQTIL FT QANERDMAAARESGMSEALLDRLLLTPARLAAIANDVRQVCRLNDPVGRVIDGSLLDSG FT LKLERRRVPLGVIGVIYEARPNVTIDVASLCLKTGNAVILRGGKETHYTNQATVNVIQR FT ALEQCGLPAAAVQAIESPDRQLVNELLRLDRYVDMLIPRGGASLHKLCREQSTIPVITG FT GIGVCHTFVDENADFEKALLVIENAKIQRPSACNSLETLLVHQAVAKTFLPLLSARMHA FT FGVTLHASPLAMPYLADGKAKVVAVEAADYDDEWLSLDLNVDIVTDIDAAIDHIREHGT FT SHSDAILTRSLSHAEYFVRAVDSSAVYVNASTRFTDGGQFGLGAEVAVSTQKLHARGPM FT GLDALTTYKWIGYGDDLVRS" FT gene 63953..64711 FT /locus_tag="YP516_0944" FT CDS 63953..64711 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_0944" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C4GQE4" FT /protein_id="EEO77285.1" FT /translation="MGPVSETSKEQFVKKNKLAICAILRDLQKNDTAVMVTHARGQFIS FT RILDIQPETNQFIFDFGSVENENVLALGAEQLTIIVEPTGAKIEFTCNKLKHVEYLSLP FT AFSSAIPEQLYFIQRREYFRVSIPQWPAYYCSGKFPDGTQYKYTLADISLGGMGLYAMK FT GSEFPLQGCSVLRDAAVDLCGFGLFKLDLQFIRALDKQVVNNKGEMLTVQRLSFKFLRL FT SPIQEKGLQRAIFELEKQQTAKARKFQEGL" FT gene 64894..65163 FT /locus_tag="YP516_0945" FT CDS 64894..65163 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_0945" FT /product="putative membrane protein" FT /db_xref="UniProtKB/TrEMBL:Q1CLC4" FT /protein_id="EEO77286.1" FT /translation="MEGSVMGISEEESIRRLTNEKNAVGHSAKWVAIISAVYFIIMLFY FT KHELGVLTLAGGIFLVSFTTWMKKRQKVKSYKNQLQQIEEDKTV" FT gene 65141..65344 FT /locus_tag="YP516_0946" FT CDS 65141..65344 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_0946" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q1CLC3" FT /protein_id="EEO77287.1" FT /translation="MRKIKPFNFADILISLHYLMNDRHHAAWMARPIIRFPGLFRLPFC FT KRHLNIAFIQKTVIASHSLVTG" FT gene 65409..65930 FT /gene="yafE" FT /locus_tag="YP516_0947" FT CDS 65409..65930 FT /codon_start=1 FT /transl_table=11 FT /gene="yafE" FT /locus_tag="YP516_0947" FT /product="predicted S-adenosyl-L-methionine-dependent FT methyltransferase" FT /note="GO_function: GO:0008168 - methyltransferase FT activity; GO_process: GO:0008152 - metabolic process" FT /db_xref="UniProtKB/TrEMBL:C4GQE7" FT /protein_id="EEO77288.1" FT /translation="MQAAADKKLTNIEIQQGLAESLPFADQSFDIVISRYSAHHWHDVG FT KALREVKRVLRPGGKVIFMDVVSPGHPVLDIYLQTVEVLRDTSHVRNYSPGEWLSLFTE FT GGLVINEVTSDRLYLEFSSWVARMRTPAHFATAIREFQKLASDGVINHYAIQADGSFTS FT DIMMIVAVRD" FT gene complement(66177..66392) FT /locus_tag="YP516_0948" FT CDS complement(66177..66392) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_0948" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C4GQE8" FT /protein_id="EEO77289.1" FT /translation="MIGTDVGIVVANVIMAETNDDRGRSISCHFFIQSSPNAHPLNVDI FT KNIASPHVLSIVACSIKKAAAKMRLS" FT gene 66660..67217 FT /locus_tag="YP516_0949" FT CDS 66660..67217 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_0949" FT /product="putative methyltransferase" FT /db_xref="UniProtKB/TrEMBL:Q1CLC1" FT /protein_id="EEO77290.1" FT /translation="MLNIVRRNFKSQFSYLQRFIASPRTVGSLVPSSPWLCQAMLNQID FT WTQNLNIAELGAADGVLTKRILSHMSANSSLQAYEIQPHFVHALHQLKDSRLQIADRSA FT EQLDQEYDVVFCCLPLLSIPTKISIRILQQTQQRLRARNGVLVLFQYSHLSESLLSRYF FT NWKKIRVVRNFPPALVYICHPN" FT gene 67464..67988 FT /gene="aroL" FT /locus_tag="YP516_0950" FT CDS 67464..67988 FT /codon_start=1 FT /transl_table=11 FT /gene="aroL" FT /locus_tag="YP516_0950" FT /product="shikimate kinase II" FT /EC_number="2.7.1.71" FT /note="GO_function: GO:0005524 - ATP binding; GO_function: FT GO:0004765 - shikimate kinase activity" FT /db_xref="InterPro:IPR000623" FT /db_xref="UniProtKB/Swiss-Prot:Q1CLC0" FT /protein_id="EEO77291.1" FT /translation="MTQTIFMVGARGAGKTTIGKALAQALGYRFVDTDLFMQQTSQMTV FT AEVVESEGWDGFRLRESMALQAVTAPKTVVATGGGAVLSSENRAFMRDHGRVIYLRASA FT AVLAKRLAEDPEEAQRPSLTGKPIVEEILDVLASREALYQDVAHHVLDGTQTPSLVVEQ FT ILQMLTGEMVK" FT gene 68478..68765 FT /gene="yaiE" FT /locus_tag="YP516_0951" FT CDS 68478..68765 FT /codon_start=1 FT /transl_table=11 FT /gene="yaiE" FT /locus_tag="YP516_0951" FT /product="conserved protein" FT /db_xref="InterPro:IPR009664" FT /db_xref="UniProtKB/Swiss-Prot:Q1CLB9" FT /protein_id="EEO77292.1" FT /translation="MLKFNEYFTGKVKSIGFDSDSIGPASVGVMEKGEYTFSTAKAEEM FT TVITGSLKVLIPGSPDWQTFMPGETFYIPGESEFNLQVAEASSYLCKYLS" FT gene complement(69001..69912) FT /gene="rdgC" FT /locus_tag="YP516_0952" FT CDS complement(69001..69912) FT /codon_start=1 FT /transl_table=11 FT /gene="rdgC" FT /locus_tag="YP516_0952" FT /product="recombination associated protein RdgC" FT /note="GO_process: GO:0006310 - DNA recombination" FT /db_xref="InterPro:IPR007476" FT /db_xref="UniProtKB/Swiss-Prot:Q1CLB8" FT /protein_id="EEO77293.1" FT /translation="MLWFKNLMVYRLSREVSLSADEMEKQLSAFSFTPCGSQDMAKTGW FT VSPMGSHSDALTHTVNGQIVICARKEEKILPSPVIKQELQDKIERLEGEQHRKLKKTEK FT DSLKDEVLHSLLPRAFSRFNQTFLWIDTVNDLIMVDAASAKRAEDTLALLRKSLGSLPV FT VPLTLENPIELTLTEWVRSKTLPAGFALMDEAELKAILEDGGVIRCKKQDLFSDEIAVH FT IEAGKLVTKLALDWQERIQLVLSDDGSLKRLKFADTLRDQNEDIDREDFAQRFDADFIL FT MTSELAALIKNLIEALGGEAQH" FT gene 70245..71159 FT /gene="mak" FT /locus_tag="YP516_0953" FT CDS 70245..71159 FT /codon_start=1 FT /transl_table=11 FT /gene="mak" FT /locus_tag="YP516_0953" FT /product="manno(fructo)kinase" FT /EC_number="2.7.1.-" FT /db_xref="InterPro:IPR000600" FT /db_xref="UniProtKB/TrEMBL:Q1CLB7" FT /protein_id="EEO77294.1" FT /translation="MRIGIDLGGTKIEVIALANDGQVLFRKRVGTPRHDYQKTIQAIAD FT LIADAEHATGEQGSIGVGIPGTLSPFTGKVKNSNSVWLNGRELDKDLSVFLNRPVRLAN FT DANCLAVSEATDGAGAGKKWVFAAVIGTGCGSGIAIDGGSHAGGNGIAGEWGHNPLPWQ FT DEEEREYAQEVTCYCGKKGCIETFVSGTGFATDYFRLSGKPLKGHEIIELVEQGDVIAE FT QAMNNYERRFAKSLAHVINLFDPDVVVLGGGMSNVDRLYDTLPALISPWVFGGECETPI FT LKALHGDSSGVRGAAWLWNTLRP" FT gene complement(71761..75450) FT /locus_tag="YP516_0954" FT CDS complement(71761..75450) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_0954" FT /product="Exonuclease SbcC" FT /note="GO_component: GO:0005694 - chromosome; GO_function: FT GO:0005524 - ATP binding; GO_process: GO:0006259 - DNA FT metabolic process; GO_process: GO:0051276 - chromosome FT organization and biogenesis" FT /db_xref="InterPro:IPR003395" FT /db_xref="UniProtKB/TrEMBL:Q1CLB6" FT /protein_id="EEO77295.1" FT /translation="MKILSLRLKNINSLQGEWKIDFTAEPFASNGLFAITGPTGAGKTT FT LLDAICLALYHQTPRLIVTPSQNELMTRHTAESLAEVEFDVKGIRYRAFWSQRRARNSP FT DGNLQAPKVELALCENGKILADKVRDKLDMIAAITGLDFGRFTKSMMLSQGQFAAFLNA FT DANDRAELLEELTGTDIYGRLSERVFEKHKQAKIDLDALHQRASGIELLNEEQRLALAQ FT QIDALSQQEQQLSKEQLVTQNQINWLTGWQQQQQHVQQYQQQQVLVEQEYQQALPGLQR FT LARSEPAEKLRPLQRERDRSQKDLQQTQQRITALAQQQQQYLAQLTPLTQAVEQATAAR FT QQQQLNQHEQETLIEQRIVPLDNLITQQQQTLSQLAGQIQQLRAKEQQNSQQLALNEQK FT LLQTHQRLQQLADYANLHAHHQHWEKHLPLWHEQFRQLQLQQQQSAQSEQQLHQQTTLL FT ATLQQQATTLSAQEKQQQVALAEARAQASYLQQKLLVLEQQQPSAQLRQQLNEFNEQRQ FT ICQQLAALSPLAQQIQALYDKQQQQFTAQQQQLKQLEQQLTEKRQLYQQQKQHLVDLEA FT LLEREKQIVTLEAERAKLQPGDACPLCGAVEHPAITAYQAVKPSETAVRVAKLRLQVEQ FT LYTEGTELRTQVASMQQHQQRIEQELQDHRQQLAAYQQRWQTLAQPLSLAFTLNEPDAL FT ALWLEQHEQQEQACQLKLVEYERLTQQYQQAKDILTQLEQRQQEHQQQLALITERQKNA FT QQTYQQLQSQYQHQQEALIAQQQVLNHTLTELSLSVPDADQQQDWLAQREEECQRWQQH FT QQEQQRLTIEQKTLETRIENERRHLQECIDQLSALSQQRQQAETLLQQQIQQRQALFGE FT DIVAEVRQRLRLQQQQAELAQQNAEKALQQAQSQLNRLSGELTGLEQQCQQYQQRATTT FT QAELQQALSTSEFADETALTAALLSEEERQHLQQLQQQLNERRQQAQIRLQQAREILDQ FT HLQLCPQGVDKSSELTLLQQQSEQLLAQLKTTTLRQGELRNQLESDTTRRHNQRTLFEQ FT IERSQQQYDDWSYLNQLIGSKEGDKFRKFAQGLTLDHLVYLANNQLSRLHGRYLLQRKT FT TDALELQVVDTWQADAIRDTRTLSGGESFLVSLALALALSDLVSHKTSIDSLFLDEGFG FT TLDAETLDTALDALDSLNASGKTIGVISHVEAMKDRIPVQIKVKKVNGLGVSRLDNAFR FT VNQD" FT gene complement(75447..76691) FT /gene="sbcD" FT /locus_tag="YP516_0955" FT CDS complement(75447..76691) FT /codon_start=1 FT /transl_table=11 FT /gene="sbcD" FT /locus_tag="YP516_0955" FT /product="exonuclease, dsDNA, ATP-dependent" FT /EC_number="3.1.11.-" FT /note="GO_function: GO:0016787 - hydrolase activity; FT GO_function: GO:0004527 - exonuclease activity; GO_process: FT GO:0006259 - DNA metabolic process" FT /db_xref="InterPro:IPR004843" FT /db_xref="UniProtKB/TrEMBL:Q1CLB5" FT /protein_id="EEO77296.1" FT /translation="MRIIHTSDWHLGQYFFTKSRAAEHQAFLHWLIEQIKEHQVDALIV FT AGDIFDTGAPPSYARELYNRFIVELQPTACQLVVLGGNHDSVATLNESRDLLSYLNTSV FT ISCASRDLKQQVIILKNRQQQPAAVLCAIPFLRPRDLVTSQAGESGDQKQLALQEAIAG FT HYQTLYQRALELRSQLGLPLPIIATGHLTTVGVTTTDSVRDIYIGTLDAFPAQAFPPAD FT YIALGHIHRAQQVAKTEHIRYSGSPIALSFDELSKEKSVYLVEFDQQNLSSVTPLFIPQ FT FQPMQLIKGDLRQIEQQLAAFAGHEGLPVWLDIEVATQDYLTDIQRRIQALAANLPVEV FT VLLRRSKEQRNNSIHRQEKETLNELTVSDVFERRLALEADLPEPRQQRMRQMFNYVVDE FT IAQDGSNGVAEEPAQ" FT gene 76810..76929 FT /locus_tag="YP516_0956" FT CDS 76810..76929 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_0956" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C4GQF6" FT /protein_id="EEO77297.1" FT /translation="MITAFGKKNNIYHYAYCSLKRDIFHKSVTKLTHNGPEIE" FT gene 76959..77648 FT /gene="phoB" FT /locus_tag="YP516_0957" FT CDS 76959..77648 FT /codon_start=1 FT /transl_table=11 FT /gene="phoB" FT /locus_tag="YP516_0957" FT /product="DNA-binding response regulator in two-component FT regulatory system with PhoR (or CreC)" FT /note="GO_function: GO:0000156 - two-component response FT regulator activity; GO_function: GO:0003677 - DNA binding" FT /db_xref="InterPro:IPR001789" FT /db_xref="UniProtKB/TrEMBL:Q1CLB4" FT /protein_id="EEO77298.1" FT /translation="MARRILVVEDEAPIREMVCFVLEQNGYQPLEAEDYDSAVARLSEP FT FPDLVLLDWMLPGGSGIQFIKHMKREALTRDIPVMMLTARGEEEDRVRGLEVGADDYIT FT KPFSPKELVARIKAVMRRISPMAVEEVIEMQGLSLDPSSHRVMANDQALDMGPTEFKLL FT HFFMTHPERVYSREQLLNYVWGTNVYVEDRTVDVHIRRLRKALETDGHDKMVQTVRGTG FT YRFSTRY" FT gene 77673..78989 FT /gene="phoR" FT /locus_tag="YP516_0958" FT /note="similar to nmpB" FT CDS 77673..78989 FT /codon_start=1 FT /transl_table=11 FT /gene="phoR" FT /locus_tag="YP516_0958" FT /product="sensory histidine kinase in two-component FT regulatory system with PhoB" FT /EC_number="2.7.3.-" FT /note="GO_component: GO:0016020 - membrane; GO_function: FT GO:0004673 - protein histidine kinase activity; FT GO_function: GO:0016772 - transferase activity, FT transferring phosphorus-containing groups; GO_function: FT GO:0004871 - signal transducer activity; GO_function: FT GO:0000155 - two-component sensor activity; GO_function: FT GO:0005524 - ATP binding; GO_process: GO:0018106 - FT peptidyl-histidine phosphorylation; GO_process: GO:0006355 FT - regulation of transcription, DNA-dependent; GO_process: FT GO:0016310 - phosphorylation; GO_process: GO:0007165 - FT signal transduction" FT /db_xref="InterPro:IPR014310" FT /db_xref="UniProtKB/TrEMBL:Q1CLB3" FT /protein_id="EEO77299.1" FT /translation="MLERLSWKTLALELALFCLPALLLGAFIGYLPWLLLVSVVAALTW FT NFYNQLKLSHWLWLDRSMTPPSGRWSWEPLFYGLYQMQLRNRRRRRELALLIKRFRSGA FT ESLPDAVVITTVDGNIFWCNGLAQQLLGFRWPEDNGQHILNLLRYPEFSQYLQQQTFSR FT PLTLQLNNGYYVEFRVMPYSEGQLLMVARDVTQMRQLEGARRNFFANVSHELRTPLTVL FT QGYLEMMHDQELAGPLRDKALGTMQEQTKRMDGLVKQLLTLSRIEAAPNVDLNERVDIP FT LMLKILQHEVQALSNGRHEITFRVNDQLKVFGNEDQLRSAVSNLVYNAVNHTPEGTKIE FT VCWQQTPQGAQFQVSDNGPGIPPEHVPRLTERFYRVDKARSRQTGGSGLGLAIVKHALS FT HHDARLEVMSEIGLGTRFIFTLPNRLIVPTVLVENAVKS" FT gene 79011..80075 FT /gene="pstS" FT /locus_tag="YP516_0959" FT CDS 79011..80075 FT /codon_start=1 FT /transl_table=11 FT /gene="pstS" FT /locus_tag="YP516_0959" FT /product="phosphate binding protein" FT /note="GO_function: GO:0005215 - transporter activity; FT GO_process: GO:0006810 - transport" FT /db_xref="InterPro:IPR011862" FT /db_xref="UniProtKB/TrEMBL:Q1CLB2" FT /protein_id="EEO77300.1" FT /translation="MKWGKLALLNVILWHSYTVFAQSIALVQPVALTRSVALTRSVALV FT LPVTLASPSITVSPSVPMPVANTLSGNLSSVGSDTLANLMSLWANDFNHHYPGVNLQIQ FT AAGSSTAPAALAAGATQLGPMSRPMKAGEIAAFIQRYGYPPLAVPVAVDALVVFVHQDN FT PLNRLTLSQLDAIFSQNRRCGEPQKIQRFGDLGLSGDWAARPLQRYGRNSASGTYGYFK FT RRVLCDGDFINNINELPGSASVVQAVAGSLNGIGYSSIGFRNSGVKSLPLAASGQDFVM FT PTAENVSNGLYPLSRYLYIYINKAPGQPLEALTAAFLERALSPEGQKLVSHDGYLPLPP FT AMLNNTRKTLGFTD" FT gene 80549..81868 FT /gene="brnQ" FT /locus_tag="YP516_0960" FT CDS 80549..81868 FT /codon_start=1 FT /transl_table=11 FT /gene="brnQ" FT /locus_tag="YP516_0960" FT /product="branched chain amino acid transporter (LIV-II)" FT /note="GO_component: GO:0016021 - integral to membrane; FT GO_function: GO:0015658 - branched-chain aliphatic amino FT acid transmembrane transporter activity; GO_process: FT GO:0015803 - branched-chain aliphatic amino acid transport" FT /db_xref="InterPro:IPR004685" FT /db_xref="UniProtKB/TrEMBL:Q1CLB1" FT /protein_id="EEO77301.1" FT /translation="MSHRLSSKDIMALGFMTFALFVGAGNIIFPPMVGLQSGEHVWWAA FT LGFLITAVGLPVITVIALARVGGGIDALSTPIGRSAGLVLATVCYLAVGPLFAIPRTAT FT VSFEVGIAPLTGNGPLPLFIYSVVYFALVIGISLYPGRLLDTVGHILAPLKILALAILG FT IAALIWPAGPLITATDAYQQAPFSSGFVNGYLTMDTLGALVFGIVIVNAARSRGVVSAV FT LLTRYTIWAGLIAGIGLTLVYLSLFKLGSSSGSLVPDAQNGAVILHAYVQHTFGGLGSM FT FLAALIFIACMVTAVGLTCACAEFFAQYLRLSYRTLVFILGIFSMLVSNLGLSHLIQIS FT IPVLTAIYPPCIVLVLMSFTLRWWQHASRIVAPVMLISLVFGILDAVKASTFANFLPAW FT AHHLPLAEQGLAWLPPSLLVFVVIGLYDRIFCRQKIVVKQ" FT gene 81944..83335 FT /gene="proY" FT /locus_tag="YP516_0961" FT CDS 81944..83335 FT /codon_start=1 FT /transl_table=11 FT /gene="proY" FT /locus_tag="YP516_0961" FT /product="probable proline-specific permease" FT /note="GO_component: GO:0016020 - membrane; GO_component: FT GO:0016021 - integral to membrane; GO_function: GO:0005279 FT - (DEPRECATED) amino acid-polyamine transporter activity; FT GO_function: GO:0015171 - amino acid transmembrane FT transporter activity; GO_process: GO:0006810 - transport; FT GO_process: GO:0006865 - amino acid transport" FT /db_xref="InterPro:IPR004841" FT /db_xref="UniProtKB/TrEMBL:Q1CLB0" FT /protein_id="EEO77302.1" FT /translation="MELPVKNKLKRGLTTRHIRFIALGSAIGTGLFYGSADAIRMAGPS FT VLLAYLIGGVVAFVIMRALGEMSVNNPQASSFSRYAQDYLGPMAGYITGWTYCFEILIV FT AIADVTAFGIYMGLWFPDVAHWVWVLSVVLIIGAVNMMSVKVFGELEFWFSFFKVATII FT IMILAGIGIIVWGIGNGGQPTGIHNLWTNGGFFSNGFVGMLLSLQLVMFAYGGIEIIGI FT TAGEAEDPKKSIPKAINSVPWRILVFYVGTLFVIMSIYPWNQVGTNGSPFVLTFQHMGI FT TIAAGILNFVVITASVSAINSDVFGVGRMLNGMAEQGHAPKAFTAISKRGVPWVTVLVM FT MCAMLIAVYLNYIMPENVFLVIASLATFATVWVWIMILFSQIAFRRSLSKDQVKALDFP FT LRGGTFTSVLAIIFLVFIIGLIGWFPTTRISLYVGLVWIVLLLVGYYFKVKYQKKQATL FT IKNAD" FT gene 83896..85725 FT /gene="malZ" FT /locus_tag="YP516_0962" FT CDS 83896..85725 FT /codon_start=1 FT /transl_table=11 FT /gene="malZ" FT /locus_tag="YP516_0962" FT /product="putative maltodextrin glucosidase" FT /EC_number="3.2.1.20" FT /note="GO_function: GO:0043169 - cation binding; FT GO_function: GO:0003824 - catalytic activity; GO_function: FT GO:0004558 - alpha-glucosidase activity; GO_process: FT GO:0005975 - carbohydrate metabolic process" FT /db_xref="InterPro:IPR017069" FT /db_xref="UniProtKB/TrEMBL:Q1CLA9" FT /protein_id="EEO77303.1" FT /translation="MLSGWHLPVSPFVRLADDALHITLWLQGDSLPAQVFLRCEPDNEE FT WLLTMEGHESHDRWRYSVSLPLYEGQPTRRYCFKLLWDDRQQWFGPLGFSVIPPAQLAQ FT FAVDVPDSGPDWVADQVFYQIFPDRFASSQADHGVQEGSYIHHAAGCPVSRREWQQPLD FT DVHAASTFYGGDLAGISQKIPYFQQLGVTALYLNPIFTAPSVHKYDTEDYYQVDPYLGG FT ERDFLQLRAATREVGIKLVLDGVFNHTGDSHRWFDRYQQGENGACHHEDSPYRGWFTFL FT PDGRALDWKGNASLPKLNFANEEVAERIYRSDDSVVRYWLRPPYSIDGWRLDVVHMLGE FT DGGAKGNLHHLHGIYQAAKEENPQAYILGEHFGDARNWLHAGVEDAAMNYMGFALPVRS FT FLAELDVACHPIKLDAADCAYWMDEYRAGLPHSQQLRLFNQLDSHDTARFLTLLKGDKT FT RMQMALIWLFSWIGVPCLFYGDEIGLDGGNDPFCRKPFPWDEAQWDHDLLSLCQRMAAL FT RHKSIALRRGGCQVIHASGDSLVFIRSYQTERVMVAIQRSDDADIFLPASPLLNVAEWQ FT RLEGGGDLAVSETGVNMGLEGKSVTLWCGVGEC" FT gene 85880..86560 FT /locus_tag="YP516_0963" FT CDS 85880..86560 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_0963" FT /product="probable short-chain dehydrogenase" FT /note="GO_function: GO:0050662 - coenzyme binding; FT GO_function: GO:0016491 - oxidoreductase activity; FT GO_function: GO:0005488 - binding; GO_function: GO:0003824 FT - catalytic activity; GO_process: GO:0044237 - cellular FT metabolic process; GO_process: GO:0008152 - metabolic FT process" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q1CLA8" FT /protein_id="EEO77304.1" FT /translation="MGTAKRTALVIGASRGLGLGLVDELSRRGWSVTATTRGAAQDTSA FT HAAHWLKLDINQPESIKQFLPQVQGQRFDLIFVNAGISGPAHQSAIDATPDEIQELFQT FT NAISPIRIAQHLLAQRNPTQSVLAFMSSQLGSIERNVSGHKPLYSASKAALNMMTRNLV FT AEVADPTLTVLSIHPGWVKTDMGGDAAPLTITTSVKGVVDQIEQASGKGGHGFIDYQGH FT SLPW" FT gene complement(86536..86670) FT /locus_tag="YP516_0964" FT CDS complement(86536..86670) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_0964" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C4GQG4" FT /protein_id="EEO77305.1" FT /translation="MTNQAIGGEVSENIIPYRTIDGGYSLEWSVLMVNKEHYHGNECP" FT gene complement(86768..88282) FT /locus_tag="YP516_0965" FT CDS complement(86768..88282) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_0965" FT /product="Gamma-glutamyltranspeptidase" FT /EC_number="2.3.2.2" FT /note="overlaps CDS with the same product name; FT GO_function: GO:0003840 - gamma-glutamyltransferase FT activity" FT /db_xref="InterPro:IPR000101" FT /db_xref="UniProtKB/TrEMBL:Q1CLA7" FT /protein_id="EEO77306.1" FT /translation="MTIHLADGTDTFINFRETAPSTANADMYLDKDGNVTKDASLYGYL FT AVGVPGTVLGMDSAQKKYGKLTRQQVMAPAIRLARDGFILTCADTDILDTTVKRFRQDP FT ESARIFLRKDGEALQPGDRLVQADLADTLSAISEKGPDAFYQGKIPQAVEAAAKKGGGI FT LTAADFADYKITETAPITCSYRGYKFVSAPPPSSGGVTLCETLNVLEGYNLKSMGFNSA FT DYIHTLTEAMRHAYMDRNTFLGDPEFVKNPLDRLLSKSYAADIRKQIVANKATPSVEVQ FT PGMQPHEKPETTHYSIVDHEGNAVSTTYTVNGRFGAVVIAPCTGFFLNNEMDDFTVKVG FT EQNLYGLVQGATNAIAPGKRPLSSMSPTLVTKDGKTFMVLGSPGGSRIISITLQTALNV FT IDHGMAPQEAVDAPRIHHQWLPDEVYYEQRGVSADSLNILKSMGYKMVEQSPWGAAELI FT LVGLAGVEGVSPANSGNDSAVSGKVREGYLYGANDVRRPAGAAIGY" FT gene complement(88279..88533) FT /locus_tag="YP516_0966" FT CDS complement(88279..88533) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_0966" FT /product="Gamma-glutamyltranspeptidase" FT /EC_number="2.3.2.2" FT /note="overlaps CDS with the same product name; FT GO_function: GO:0003840 - gamma-glutamyltransferase FT activity" FT /db_xref="InterPro:IPR000101" FT /db_xref="UniProtKB/TrEMBL:Q1CLA6" FT /protein_id="EEO77307.1" FT /translation="MFLTKWNKPLAVLALLVSGTLHAASTPAVEAKNGMVVTSQYLASQ FT VGADILKMGGNAVDAAVAVGYAQAVVNPCCGNIGGGGVL" FT gene complement(88922..89524) FT /gene="ahpC" FT /locus_tag="YP516_0967" FT CDS complement(88922..89524) FT /codon_start=1 FT /transl_table=11 FT /gene="ahpC" FT /locus_tag="YP516_0967" FT /product="putative alkyl hydroperoxide reductase subunit c" FT /note="GO_function: GO:0016491 - oxidoreductase activity; FT GO_function: GO:0016209 - antioxidant activity" FT /db_xref="InterPro:IPR019479" FT /db_xref="UniProtKB/TrEMBL:Q1CLA5" FT /protein_id="EEO77308.1" FT /translation="MVLVTRQAPDFTAAAVLGNGEIVENFNLKKHLNGRPAVLFFWPMD FT FTFVCPSELIAFDHRYEEFQKRGVEVVGVSFDSEFVHNAWRKTPVDKGGIGEVKYPMVA FT DIKREIQKAYGIEHPDAGVALRGSFLIDKNGIVRSQIVNDLPIGRNIDEMIRTVDALQF FT HEEHGEVCPAQWEKGKAGMGASPDGVAKYLSENASKL" FT gene complement(89823..90404) FT /gene="acpH" FT /locus_tag="YP516_0968" FT /note="similar to yajB" FT CDS complement(89823..90404) FT /codon_start=1 FT /transl_table=11 FT /gene="acpH" FT /locus_tag="YP516_0968" FT /product="ACP phosphodiesterase" FT /EC_number="3.1.4.14" FT /note="GO_function: GO:0008770 - [acyl-carrier-protein] FT phosphodiesterase activity" FT /db_xref="UniProtKB/TrEMBL:C4GQG8" FT /protein_id="EEO77309.1" FT /translation="MNFLAHLHLAALADSSLLGNLLADFVRGNPQGEYPPEIVAGIMMH FT RRVDVMTDTLPLVKEARTYFSADYRRVSPITLDVLWDHFLARHWDQLVPNCTLPDFLQH FT AQSQILPHLPHTPARFQSLNAYLWSERWLERYAELPFIADVLQGMANRRPKLAALAGSF FT YAIEQHYQPLEDLFLTFYPTMMRQAQHKQI" FT gene complement(90441..90563) FT /locus_tag="YP516_0969" FT CDS complement(90441..90563) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_0969" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C4GQG9" FT /protein_id="EEO77310.1" FT /translation="MLLQTILGTNSTQNGKKQPHGVGSQKQAASLEPSRAGCKK" FT gene 90607..91677 FT /gene="queA" FT /locus_tag="YP516_0970" FT CDS 90607..91677 FT /codon_start=1 FT /transl_table=11 FT /gene="queA" FT /locus_tag="YP516_0970" FT /product="S-adenosylmethionine:tRNA FT ribosyltransferase-isomerase" FT /note="GO_function: GO:0003824 - catalytic activity; FT GO_function: GO:0016853 - isomerase activity; GO_process: FT GO:0008616 - queuosine biosynthetic process" FT /db_xref="UniProtKB/TrEMBL:C4GQH0" FT /protein_id="EEO77311.1" FT /translation="MRVADFSFELPEALIAHYPQPQRSGCRLLSLDGPTGTLTHGIFTD FT LLDKLAPGDLLVFNNTRVIPARLFGRKASGGKLEVLVERVLDDHRVLAHVKASKAPKPG FT AELLLGDDESIRATMLARHDTLFELRFDDERDVFTILNAVGHMPLPPYIDRPDEDADRE FT LYQTVYSQRPGAVAAPTAGLHFDEPMLAALQEKGIEMAFVTLHVGAGTFQPVRVDTIED FT HIMHSEYAEVPQEVVDAVLACKARGKRVVAVGTTSVRSLESAAKAAENGLIAPFFGDTR FT IFIYPGYHYQVVDALVTNFHLPESTLIMLVSAFAGYKNTMNAYQQAVAEQYRFFSYGDA FT MFISRNPRAPQEKVSP" FT gene 91770..92894 FT /gene="tgt" FT /locus_tag="YP516_0971" FT CDS 91770..92894 FT /codon_start=1 FT /transl_table=11 FT /gene="tgt" FT /locus_tag="YP516_0971" FT /product="tRNA-guanine transglycosylase" FT /EC_number="2.4.2.29" FT /note="GO_function: GO:0008479 - queuine FT tRNA-ribosyltransferase activity; GO_process: GO:0006400 - FT tRNA modification; GO_process: GO:0008616 - queuosine FT biosynthetic process" FT /db_xref="InterPro:IPR002616" FT /db_xref="UniProtKB/Swiss-Prot:Q1CLA2" FT /protein_id="EEO77312.1" FT /translation="MKYELQKTDGRARRGRLVFERGVVETPAFMPVGTYGTVKGMTPEE FT VKETGAQILLGNTFHLWLRPGQEIMKLHGDLHDFMQWHGPILTDSGGFQVFSLGAMRKI FT KEEGVHFKNPINGDSVFLSPEKSMEIQYDLGSDIVMIFDECTPYPADWDYAKRSMEMSL FT RWAARSRQRFDELNNKNALFGIIQGGVYEDLRDVSVKGLVDIGFDGYAVGGLAVGEPKE FT DMHRILEHVCPQIPEDKPRYLMGVGKPEDLVEGVRRGIDMFDCVMPTRNARNGHLFVTD FT GVVKIRNAKHKDDTATLDEHCDCYTCRHYSRAYLHHLDRCNEILGARLNTIHNLRYYQR FT LMAGLRQAIEEGKLEHFVEDFYGRIGKPVPPLNV" FT gene 93006..93341 FT /gene="yajC" FT /locus_tag="YP516_0972" FT CDS 93006..93341 FT /codon_start=1 FT /transl_table=11 FT /gene="yajC" FT /locus_tag="YP516_0972" FT /product="SecYEG protein translocase auxillary subunit" FT /db_xref="InterPro:IPR003849" FT /db_xref="UniProtKB/TrEMBL:Q1CLA1" FT /protein_id="EEO77313.1" FT /translation="MSFFISDAVASAGAPAQGNSMTSMLIMLVVFGLIFYFMILRPQQK FT RAKEHKKLMDSIGKGDEVLTSGGFIGRVTKVAETGYVVIALNDTTEVMIKRDFVAAVLP FT KGTMKAL" FT gene 93369..95216 FT /gene="secD" FT /locus_tag="YP516_0973" FT CDS 93369..95216 FT /codon_start=1 FT /transl_table=11 FT /gene="secD" FT /locus_tag="YP516_0973" FT /product="SecYEG protein translocase auxillary subunit" FT /note="GO_component: GO:0015627 - type II protein secretion FT system complex; GO_component: GO:0009276 - 1-2nm FT peptidoglycan-based cell wall; GO_function: GO:0008565 - FT protein transporter activity; GO_function: GO:0015450 - FT P-P-bond-hydrolysis-driven protein transmembrane FT transporter activity; GO_process: GO:0015628 - protein FT secretion by the type II secretion system; GO_process: FT GO:0006886 - intracellular protein transport" FT /db_xref="InterPro:IPR005791" FT /db_xref="UniProtKB/TrEMBL:Q1CLA0" FT /protein_id="EEO77314.1" FT /translation="MLNRYPLWKYLMLIVVIFVGLLYALPNLYGEDPAVQITGARGIAA FT SETTLVQVRDVLEKDNIASKSIALENGAILARFRDPDVQLRAREALVEALGDKYVIALN FT LAPATPSWLAKLGAEPMKLGLDLRGGVHFLMEVDMDTALGKLQEQTMDTLRTDLREKNI FT PYATVRKLDNYGVEVRFRDDKARNDAISYLSSRHRDLVFSSNGSNTLKAVMSDERLREA FT REYAVQQNITILRNRVNQLGVAEPLVQRQGSDRIVVELPGIQDTARAKEILGATATLEF FT RLVNTNVDASVAASGRVPGDSEVKNTREGRPVVLYKRVILTGDHITDSTSSTDEYNQAQ FT VNISLDSAGGATMSNFTKDNIGKPMATLFVEYKDSGKKDANGRSILVKQEEVINVATIQ FT SRLGNSFRITGIDNPAEARQLSLLLRAGALIAPIQIVEERTIGPTLGSQNIAQGLEACL FT WGLAVSILFMVVYYRKFGVIASTALMANLVLIVGVMSLLPGATLTMPGIAGIVLTLAVA FT VDANVLINERIKEEYRNGRTIQQAIHEGYKGAFSSIVDANITTLITAIILYAVGTGSIK FT GFAITTAIGVVTSMFTAIVGTRAIVNLLYGGKRINKLSI" FT gene 95227..96195 FT /gene="secF" FT /locus_tag="YP516_0974" FT CDS 95227..96195 FT /codon_start=1 FT /transl_table=11 FT /gene="secF" FT /locus_tag="YP516_0974" FT /product="SecYEG protein translocase auxillary subunit" FT /note="GO_component: GO:0015627 - type II protein secretion FT system complex; GO_component: GO:0009276 - 1-2nm FT peptidoglycan-based cell wall; GO_function: GO:0008565 - FT protein transporter activity; GO_function: GO:0015450 - FT P-P-bond-hydrolysis-driven protein transmembrane FT transporter activity; GO_process: GO:0015628 - protein FT secretion by the type II secretion system; GO_process: FT GO:0006886 - intracellular protein transport" FT /db_xref="InterPro:IPR005665" FT /db_xref="UniProtKB/TrEMBL:Q1CL99" FT /protein_id="EEO77315.1" FT /translation="MAQDYTVEQLNYGRKVYDFMRWDYVAFGVSLLLLVASIVVMSTKG FT FNWGLDFTGGTVIEINLENPADLDQLRDTLQNAGFESPILQNFGSSRDVMVRMPPATGT FT AGQELGNKIISVINESVDKNASVKRIEFVGPSVGSDLAQAGALALLVALLSILVYVGFR FT FEWRLALGAVISLAHDVVITMGILSLFHIEIDLTIIASLMSVIGYSLNDSIVVSDRIRE FT NFRKIRRGTPYEIMNVSLTQTLSRTIMTSATTLMVVLMLFIFGGAMLQGFSLTMLIGVT FT IGTVSSIYVASALALKLGMKREHMLQPKVEKEGADQPSILP" FT repeat_region 96257..96966 FT /mobile_element="insertion sequence:IS1541A" FT /note="IS1541A.18" FT gene 96351..96860 FT /locus_tag="YP516_0976" FT CDS 96351..96860 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_0976" FT /product="transposase" FT /note="GO_function: GO:0004803 - transposase activity; FT GO_function: GO:0003677 - DNA binding; GO_process: FT GO:0006313 - transposition, DNA-mediated" FT /db_xref="UniProtKB/TrEMBL:C4GNE8" FT /protein_id="EEO77316.1" FT /translation="MRSGNCKCSTRNQKGVPMRDEKSLAHTRWNCKYHIVFAPKYRRQV FT FYREKRRAIGSILRKLCEWKNVNILEAECCVDHIHMLLEIPPKMSVSGFMGYLKGKSSL FT MLYEQFGDLKFKYRNREFWCRGYYVDTVGKNTARIQEYIKHQLEEDKMGEQLSIPYPGS FT PFTGRK" FT gene 97158..97853 FT /locus_tag="YP516_0977" FT CDS 97158..97853 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_0977" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q1CL96" FT /protein_id="EEO77317.1" FT /translation="MTVSYVGRGESLSWVYGVDNVNIPNSDVVDSPFNDFTQFDNMDFS FT ANYNSILSRENKSLITSFISEYNDKVKRLSADENYILTQKYISSLDEMCEEINKKLLYC FT HDSKVLKNVLDSTLQKQTEMSKYIVLLEGVPYRIEPRDIAADITNERINGAIELLNFVA FT KAYPKIAKESAKLQRSRPHANCSVETLNDYLEQLKKYCQARNYSVIEDNALHQFILKTH FT GVAVISLDE" FT gene 97886..98479 FT /locus_tag="YP516_0978" FT CDS 97886..98479 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_0978" FT /product="putative membrane protein" FT /db_xref="UniProtKB/TrEMBL:Q1CL95" FT /protein_id="EEO77318.1" FT /translation="MEGIYIGFTQRTIESQTENQSVVFKSSKHEMVENKLIYLASLANE FT LSKLNDSISDENLKYSINKVVGEVLELKLKKIQKMAKSSKCNFSFSNLKKDLAMLSSLA FT VTGIAAGVIPTFIATGAVAAIAPILAALGCAIYAFNPQLKETETSKLLDASIKDIGATL FT GSELKDEKLGRFEYLRHKYAAYKYRKAAKHTFDG" FT gene 98550..98999 FT /locus_tag="YP516_0979" FT CDS 98550..98999 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_0979" FT /product="ribonucleotide reductase transcriptional FT regulator NrdR" FT /db_xref="InterPro:IPR003796" FT /db_xref="UniProtKB/Swiss-Prot:Q1CL94" FT /protein_id="EEO77319.1" FT /translation="MHCPFCAAVDTKVIDSRLVSDGSQVRRRRQCLDCNERFTTFEVAE FT LVLPRVIKSDEVREPFNEEKLRRGMLKALEKRPVSSDDVETAISHIKSQLRATGEREVP FT TKMVGNLVMEALKRLDKVAYIRFASVYRSFEDVREFGEEIARLQD" FT gene 99149..100258 FT /gene="ribD" FT /locus_tag="YP516_0980" FT /note="similar to ribG" FT CDS 99149..100258 FT /codon_start=1 FT /transl_table=11 FT /gene="ribD" FT /locus_tag="YP516_0980" FT /product="bifunctional FT diaminohydroxyphosphoribosylaminopyrimidine FT deaminase/5-amino-6-(5-phosphoribosylamino) uracil FT reductase" FT /EC_number="1.1.1.193" FT /EC_number="3.5.4.26" FT /note="GO_function: GO:0016787 - hydrolase activity; FT GO_function: GO:0008270 - zinc ion binding; GO_function: FT GO:0003824 - catalytic activity; GO_function: GO:0008835 - FT diaminohydroxyphosphoribosylaminopyrimidine deaminase FT activity; GO_function: GO:0008703 - FT 5-amino-6-(5-phosphoribosylamino)uracil reductase activity" FT /db_xref="InterPro:IPR016192" FT /db_xref="UniProtKB/TrEMBL:Q1CL93" FT /protein_id="EEO77320.1" FT /translation="MQPDEFYMARAFELARLGRFTTSPNPNVGCVLVRDGEIVGEGYHL FT RAGEPHAEVHALRMAGEKARGATAYVTLEPCSHYGRTPPCADALVAAGVIRVVAAMQDP FT NPEVAGRGLYKLKQAGIAVDHGLMLAEAEAVNLGFLKRMRTGFPYVQLKMAASLDGRTA FT MASGESQWITSPQARQDVQRFRAESSAILSTSATVLADDPSLTVRWQDLDAETQVLYPH FT DSVRQPVKIILDSHNRVTPRHKVIQQDGPCWLARVDADDQPWPGNIEQLLLPRYGNGVD FT LVVLMMQLGKRNINSVWVEAGPQLAGALLQAGVVDELILYIAPKLLGSDARGLCELAGL FT TNLSQAPEFAFSDVRLVGPDLRLRLKPKY" FT gene 100394..100864 FT /gene="ribE" FT /locus_tag="YP516_0981" FT /note="similar to ribH" FT CDS 100394..100864 FT /codon_start=1 FT /transl_table=11 FT /gene="ribE" FT /locus_tag="YP516_0981" FT /product="riboflavin synthase beta chain" FT /EC_number="2.5.1.9" FT /note="GO_component: GO:0009349 - riboflavin synthase FT complex; GO_function: GO:0004746 - riboflavin synthase FT activity; GO_process: GO:0009231 - riboflavin biosynthetic FT process" FT /db_xref="InterPro:IPR002180" FT /db_xref="UniProtKB/Swiss-Prot:Q1CL92" FT /protein_id="EEO77321.1" FT /translation="MNVIEGVVATPNARVAIAIARFNNFINDSLLDGAIDALKRIGQVS FT DDNITVVWVPGAYELPLVANVLAKTNRYDAVIALGTVIRGGTAHFEYVAGEASSGLSSV FT AMNSDIPVAFGVLTTESIEQAIERAGTKAGNKGAEAALTALEMINVIKAIKG" FT gene 100885..101301 FT /gene="nusB" FT /locus_tag="YP516_0982" FT /note="similar to ssyB" FT CDS 100885..101301 FT /codon_start=1 FT /transl_table=11 FT /gene="nusB" FT /locus_tag="YP516_0982" FT /product="transcription antitermination protein" FT /note="GO_function: GO:0003715 - transcription termination FT factor activity; GO_function: GO:0003723 - RNA binding; FT GO_process: GO:0006353 - transcription termination; FT GO_process: GO:0006355 - regulation of transcription, FT DNA-dependent" FT /db_xref="InterPro:IPR006027" FT /db_xref="UniProtKB/Swiss-Prot:Q1CL91" FT /protein_id="EEO77322.1" FT /translation="MKPAARRRARECAVQALYSWQLSKNDIADVELQFLSEQDVKDVDI FT AYFRELLSGVAVNAASLDALMAPFLSRQLEELGQVERAVLRIALFELSKRDDVPYKVAI FT NEAIELAKTFGAEDSHKFVNGVLDKVAPTVRKRK" FT gene 101542..102531 FT /gene="thiL" FT /locus_tag="YP516_0983" FT CDS 101542..102531 FT /codon_start=1 FT /transl_table=11 FT /gene="thiL" FT /locus_tag="YP516_0983" FT /product="thiamin-monophosphate kinase" FT /EC_number="2.7.4.16" FT /note="GO_function: GO:0003824 - catalytic activity; FT GO_function: GO:0009030 - thiamin phosphate kinase FT activity; GO_process: GO:0009228 - thiamin biosynthetic FT process" FT /db_xref="InterPro:IPR010918" FT /db_xref="UniProtKB/TrEMBL:Q1CL90" FT /protein_id="EEO77323.1" FT /translation="MACGEFDLIARYFDRFRSNRRDVELGIGDDCALLTVAEKQLLAIS FT TDTLVSGVHFLPDIDPADLGYKSLAVNLSDLSAMGADPAWLSLALTLPSVNEDWLQAFS FT DSLFDQLNYYGMQLIGGDTTRGPLSLTLTIHGFVPEGRALARAGARIGDWIYVTGTLGD FT SAAGLAILQNELRVDNETDRAALIHRHLRPQPRVLQGQALRMLASAAIDISDGLISDLQ FT HILKASHCGARIELDMLPYSDALKNQVDTEQALRWALSGGEDYELCFTVPEINRGALEV FT ALSNTGAGYTCIGQIGPQSEGVKFFREGKIVKLDFRGFDHFSTGKSHG" FT gene 102497..103009 FT /locus_tag="YP516_0984" FT CDS 102497..103009 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_0984" FT /product="Phosphatidylglycerophosphatase A" FT /EC_number="3.1.3.27" FT /note="GO_function: GO:0008962 - FT phosphatidylglycerophosphatase activity; GO_process: FT GO:0006629 - lipid metabolic process" FT /db_xref="UniProtKB/TrEMBL:C4GQI3" FT /protein_id="EEO77324.1" FT /translation="MIISQQVNLMDEAKRRLRLSNPWHLLATGFGSGLSPWAPGTMGSI FT AAIPFWLLLIQLPWQLYVLLVMFSICIGIYICHRTAKDMQVHDHGSIVWDEFVGMWITL FT MALPVNSWQWVVAGFIAFRIFDIWKPWPIRWFDRNIHGGTGIMVDDIIAGVVAAAVIFV FT IGHYWPL" FT repeat_region 103078..103787 FT /mobile_element="insertion sequence:IS1541A" FT /note="IS1541A.19" FT gene 103172..103681 FT /locus_tag="YP516_0986" FT CDS 103172..103681 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_0986" FT /product="transposase" FT /note="GO_function: GO:0004803 - transposase activity; FT GO_function: GO:0003677 - DNA binding; GO_process: FT GO:0006313 - transposition, DNA-mediated" FT /db_xref="UniProtKB/TrEMBL:C4GNH4" FT /protein_id="EEO77325.1" FT /translation="MRSGNCKCSTRNQKGVPMRDEKSLAHTRWNCKYHIVFAPKYRRQV FT FYREKRRAIGSILRKLCEWKNVNILEAEYCVDHIHMLLEIPPKMSVSGFMGYLKGKSSL FT MLYEQFGDLKFKYRNREFWCRGYYVDTVGKNTARIQEYIKHQLEEDKMGEQLSIPYPGS FT PFTGRK" FT gene complement(103860..105719) FT /gene="dxs" FT /locus_tag="YP516_0987" FT CDS complement(103860..105719) FT /codon_start=1 FT /transl_table=11 FT /gene="dxs" FT /locus_tag="YP516_0987" FT /product="1-deoxyxylulose-5-phosphate synthase, FT thiamine-requiring, FAD-requiring" FT /EC_number="2.2.1.7" FT /note="GO_function: GO:0008661 - FT 1-deoxy-D-xylulose-5-phosphate synthase activity; FT GO_function: GO:0003824 - catalytic activity; GO_process: FT GO:0016114 - terpenoid biosynthetic process; GO_process: FT GO:0008152 - metabolic process" FT /db_xref="InterPro:IPR005475" FT /db_xref="UniProtKB/Swiss-Prot:Q1CL87" FT /protein_id="EEO77326.1" FT /translation="MSLDIAKYPTLALAENPEELRMLPKESLPKLCDELRQYLLTCVSR FT SSGHFASGLGVVELTVALHYVYNTPFDHLIWDVGHQAYPHKILTGRRDRISTIRQKDGL FT HPFPWRGESEYDVLSVGHSSTSISAGLGMAVAAEREGKGRRTVCVIGDGAITAGMAFEA FT MSHAGDIHSDMLVILNDNGMSISENVGGLNNHLAQLLSGKLYASLREGGKKAFSALPPI FT KDLLKRTEEHLKGMVVPSTLFEELGFNYIGPVDGHDVHTLTQTLKNMRDLKSPQLLHIM FT TKKGKGYAPAEKDPIGWHAVPKFDPASGTLPKSQSSLPTYSKIFGEWLCETAAKDSKLM FT AVTPAMREGSGMVRFSREYPQQYFDVAIAEQHAVTFAAGLAIGGYKPVVAIYSTFLQRA FT YDQLIHDVAIQNLPVLFAIDRGGLVGADGQTHQGAFDLSFMRCIPNMVIMAPSDENECR FT QMLYTGYHHNGPAAVRYPRGNGTSAVLEPLEMLPIGKGVLRREGEKIAILCFGTLLAQA FT QLAAENLNATLVDMRFVKPLDEELVLEMAAKHQVLVTVEENAIMGGAGSGVNELLMAKR FT RWVPVLNIGLPDLFVPQGEQDEMRSELGLDAAGIQRQIEAWLA" FT gene complement(105875..106795) FT /gene="ispA" FT /locus_tag="YP516_0988" FT CDS complement(105875..106795) FT /codon_start=1 FT /transl_table=11 FT /gene="ispA" FT /locus_tag="YP516_0988" FT /product="geranyltranstransferase" FT /EC_number="2.5.1.10" FT /EC_number="2.5.1.1" FT /EC_number="2.5.1.29" FT /note="GO_function: GO:0004337 - geranyltranstransferase FT activity; GO_function: GO:0004311 - FT farnesyltranstransferase activity; GO_process: GO:0008299 - FT isoprenoid biosynthetic process" FT /db_xref="InterPro:IPR017446" FT /db_xref="UniProtKB/TrEMBL:Q1CL86" FT /protein_id="EEO77327.1" FT /translation="MSDTHAPVDFKQQLAAHQQRVNQALLDFIAPLPFGNSNLIEAMRY FT GAVIGGKRLRPYLVYATGQMFGLSLANLDAPAAAIECIHAYSLIHDDLPAMDDDDLRRG FT QPTCHVKFGEAHAILAGDALQTLAFSILAEAPMPDVADKDRLSMIIELAQASGAAGMCA FT GQALDLEAETRPVLLGDLEQIHRHKTGALIRAAVRLGAQAAGEAGRKTLLSLDRYAEAI FT GLAFQVQDDILDVIGDTATIGKRQGSDQQLGKSTYPALLGLDCAQTKAMDLYQEALEAL FT DELAKQSYNTDSLQALARFIIERNN" FT gene complement(106800..107054) FT /gene="xseB" FT /locus_tag="YP516_0989" FT CDS complement(106800..107054) FT /codon_start=1 FT /transl_table=11 FT /gene="xseB" FT /locus_tag="YP516_0989" FT /product="exonuclease VII small subunit" FT /EC_number="3.1.11.6" FT /note="GO_component: GO:0009318 - exodeoxyribonuclease VII FT complex; GO_function: GO:0008855 - exodeoxyribonuclease VII FT activity; GO_process: GO:0006308 - DNA catabolic process" FT /db_xref="UniProtKB/TrEMBL:C4GQI7" FT /protein_id="EEO77328.1" FT /translation="MPKKAASPEIKAASFETSLSELEQIVTRLESGELPLEDALNEFER FT GVQLARQGQQTLLQAEQRVQILLSDDVDAPLKPFTPDTE" FT gene 107136..107306 FT /locus_tag="YP516_0990" FT CDS 107136..107306 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_0990" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q1CL84" FT /protein_id="EEO77329.1" FT /translation="MSRHSIPANEGFSGHNPPEHQIRRIQTKNLLPAILADNVGEIVAF FT RSGFSTQWHII" FT gene 107404..108855 FT /gene="thiI" FT /locus_tag="YP516_0991" FT CDS 107404..108855 FT /codon_start=1 FT /transl_table=11 FT /gene="thiI" FT /locus_tag="YP516_0991" FT /product="sulfur transfer protein" FT /note="GO_process: GO:0009228 - thiamin biosynthetic FT process" FT /db_xref="InterPro:IPR004114" FT /db_xref="UniProtKB/Swiss-Prot:Q1CL83" FT /protein_id="EEO77330.1" FT /translation="MKFIIKLFPEITIKSQSVRLRFIKILTTNIRNVLKHLEDDTLAIV FT RHWDHIELRTKDDNLGPEICDALTRIPGIHHILEVEDRSYSDMHNIFEQTLEAYRETLV FT GKTFCVRVKRRGKHEFSSGDVERYVGGGLNQHIESAKVNLTRPQVTVNLEVDQDKLILV FT KARHEGLGGFPIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGGSAHEIGVK FT QVAHYLWNRFGSSHRVRFIAIDFEPVVGEILEKVEDGQMGVVLKRMMVRAASQVAERYG FT VQALVTGEALGQVSSQTLTNLRLIDNASDTLILRPLISHDKEHIINLARQIGTEDFAKT FT MPEYCGVISKSPTVKAVKAKIEEEESHFDFSILDRVVSEAKNVDIREIAQQSREQVVEV FT ETVAELADTDVLLDIRAPDEQEEKPLKLDQVEVRSLPFYKLSSQFADLDQSKTYLLYCD FT RGVMSRLQALYLREQGYTNVKVYRP" FT gene complement(108923..109513) FT /gene="yajL" FT /locus_tag="YP516_0992" FT /note="similar to thiJ" FT CDS complement(108923..109513) FT /codon_start=1 FT /transl_table=11 FT /gene="yajL" FT /locus_tag="YP516_0992" FT /product="conserved protein" FT /db_xref="InterPro:IPR006287" FT /db_xref="UniProtKB/TrEMBL:Q1CL82" FT /protein_id="EEO77331.1" FT /translation="MSVSALVCLAPGSEETEAVTTIDILVRAGINVTTASVAGDGALEI FT ICSRGVRLLADTRLVDVADQKFDVIVLPGGIKGAECFRDSPLLVATVRQTHNEGRLVAA FT ICAAPALVLEHHQLFPVGNMTGFPSLKDKIAPNKWMDQRVVYDRRVNLVTSQGPGTSID FT FALKIVFLLLGREKAEEIAWQLVLPPGIYNYRE" FT gene complement(109476..110387) FT /gene="panE" FT /locus_tag="YP516_0993" FT /note="similar to apbA" FT CDS complement(109476..110387) FT /codon_start=1 FT /transl_table=11 FT /gene="panE" FT /locus_tag="YP516_0993" FT /product="2-dehydropantoate reductase, NADPH-specific" FT /EC_number="1.1.1.169" FT /note="GO_component: GO:0005737 - cytoplasm; GO_function: FT GO:0050661 - NADP binding; GO_function: GO:0008677 - FT 2-dehydropantoate 2-reductase activity; GO_function: FT GO:0050662 - coenzyme binding; GO_function: GO:0016491 - FT oxidoreductase activity; GO_function: GO:0005488 - binding; FT GO_function: GO:0003824 - catalytic activity; GO_process: FT GO:0006206 - pyrimidine base metabolic process; GO_process: FT GO:0015939 - pantothenate metabolic process; GO_process: FT GO:0008152 - metabolic process" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q1CL81" FT /protein_id="EEO77332.1" FT /translation="MKITVLGCGALGQLWLSMLHQQDHDVQGWLRVPQPFCSVNVIMLN FT GESFNRNLTTNDPKHLLQSELLLVCLKAWQVSSAVTALLPKLNPECKILLLHNGMGTQE FT ELPLNEHVFLHGVTTHAARRDGNTIIHVASGMTHIGPTSSVIIDDNHLADTLHQALPDV FT AWHNDISAACWQKLAVNCVINPLTGLYNCRNGDVQRYPELIERLCAEVASVMEMEGYHT FT STESLLSYVNNVIRSTADNTSSLLQDLRSQRHTEIDYITGYLLRRARSHGMALPENARL FT YELIKRKESDYERIGAGLPGSW" FT gene 110619..110840 FT /locus_tag="YP516_0994" FT CDS 110619..110840 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_0994" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR007551" FT /db_xref="UniProtKB/TrEMBL:Q1CL80" FT /protein_id="EEO77333.1" FT /translation="MPSFDIVSEIDMQEVRNAVENATRDLANRWDFRNVPASFELNEKN FT ESIKVVSESDCQRRMKSDPLISPPTAQY" FT repeat_region complement(110784..112737) FT /mobile_element="insertion sequence:IS100kyp" FT /note="IS100kyp.5" FT gene complement(110850..111632) FT /locus_tag="YP516_0995" FT CDS complement(110850..111632) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_0995" FT /product="transposase" FT /note="GO_function: GO:0005524 - ATP binding; GO_function: FT GO:0017111 - nucleoside-triphosphatase activity; FT GO_function: GO:0000166 - nucleotide binding" FT /db_xref="UniProtKB/TrEMBL:C4GNY9" FT /protein_id="EEO77334.1" FT /translation="MMMELQHQRLMALAGQLQLESLISAAPALSQQAVDQEWSYMDFLE FT HLLHEEKLARHQRKQAMYTRMAAFPAVKTFEEYDFTFATGAPQKQLQSLRSLSFIERNE FT NIVLLGPSGVGKTHLAIAMGYEAVRAGIKVRFTTAADLLLQLSTAQRQGRYKTTLQRGV FT MAPRLLIIDEIGYLPFSQEEAKLFFQVIAKRYEKSAMILTSNLPFGQWDQTFAGDAALT FT SAMLDRILHHSHVVQIKGESYRLRQKRKAGVIAEANPE" FT gene complement(111629..112651) FT /locus_tag="YP516_0996" FT CDS complement(111629..112651) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_0996" FT /product="transposase" FT /note="GO_function: GO:0003677 - DNA binding; GO_function: FT GO:0000150 - recombinase activity; GO_function: GO:0003676 FT - nucleic acid binding; GO_process: GO:0015074 - DNA FT integration; GO_process: GO:0006310 - DNA recombination" FT /db_xref="InterPro:IPR017894" FT /db_xref="UniProtKB/TrEMBL:Q1CC61" FT /protein_id="EEO77335.1" FT /translation="MVTFETVMEIKILHKQGMSSRAIARELGISRNTVKRYLQAKSEPP FT KYTPRPAVASLLDEYRDYIRQRIADAHPYKIPATVIAREIRDQGYRGGMTILRAFIRSL FT SVPQEQEPAVRFETEPGRQMQVDWGTMRNGRSPLHVFVAVLGYSRMLYIEFTDNMRYDT FT LETCHRNAFRFFGGVPREVLYDNMKTVVLQRDAYQTGQHRFHPSLWQFGKEMGFSPRLC FT RPFRAQTKGKVERMVQYTRNSFYIPLMTRLRPMGITVDVETANRHGLRWLHDVANQRKH FT ETIQARPCDRWLEEQQSMLALPPEKKEYDVHLDENLVNFDKHPLHHPLSIYDSFCRGVA FT " FT gene 112704..113069 FT /locus_tag="YP516_0997" FT CDS 112704..113069 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_0997" FT /product="UPF0234 protein yajQ" FT /db_xref="UniProtKB/TrEMBL:C4GQJ5" FT /protein_id="EEO77336.1" FT /translation="MGVDHYCTVRYTDFQVEQLLDILRAQLSKRGIEGAALEIPEEMAR FT SGKTYSVDAKLKQGIESVQAKKLVKLIKDSKLKVQAQIQGEQVRVTGKARDDLQAVMAL FT VRAADLGQPFQFNNFRD" FT gene complement(113193..114557) FT /gene="yajR" FT /locus_tag="YP516_0998" FT CDS complement(113193..114557) FT /codon_start=1 FT /transl_table=11 FT /gene="yajR" FT /locus_tag="YP516_0998" FT /product="predicted transporter" FT /note="GO_component: GO:0016021 - integral to membrane; FT GO_function: GO:0005215 - transporter activity; FT GO_function: GO:0046872 - metal ion binding; GO_process: FT GO:0006810 - transport; GO_process: GO:0030001 - metal ion FT transport" FT /db_xref="InterPro:IPR011701" FT /db_xref="UniProtKB/TrEMBL:Q1CL76" FT /protein_id="EEO77337.1" FT /translation="MNDNKMTPLELRATWGLGTVFSLRMLGMFMVLPVLTTYGMALSGA FT SEALIGIAIGIYGLSQAIFQIPFGLLSDRIGRKPMIIGGLLVFALGSIIAALSDSIWGI FT ILGRALQGSGAIAAAVMALLSDLTREQNRTKAMAFIGVSFGVTFAMAMVLGPIVTHAFG FT LQALFWGIAILALLGIVITLTVVPSANSHVLNRESSMVKGSVSKVLHNSRLLKLNFGIM FT CLHILLMSSFVALPQMMANAGLAPAQHWVVYLVTMLVSFAAVVPFIIYAEMKRRMKQVF FT MGCVAVLFIAEVVLWFAGQDLWIIIAGVQLFFIAFNVMEAILPSLISKESPAGYKGTAM FT GIYSTSQFIGVAIGGSLGGWIFGLEGADMVFAAGAIIALVWFAVSVTMQEPPYVSSLRI FT TLSESAVKNTTLEERLKAQPGVTEAVVVTAERSAYVKVDIKQTNRNQLEQLINAA" FT gene complement(115041..115931) FT /gene="cyoE" FT /locus_tag="YP516_0999" FT CDS complement(115041..115931) FT /codon_start=1 FT /transl_table=11 FT /gene="cyoE" FT /locus_tag="YP516_0999" FT /product="protoheme IX farnesyltransferase" FT /note="GO_component: GO:0016021 - integral to membrane; FT GO_function: GO:0004659 - prenyltransferase activity; FT GO_function: GO:0008495 - protoheme IX farnesyltransferase FT activity; GO_process: GO:0006783 - heme biosynthetic FT process" FT /db_xref="InterPro:IPR000537" FT /db_xref="UniProtKB/Swiss-Prot:Q1CL75" FT /protein_id="EEO77338.1" FT /translation="MMIKQYLQVTKPGIIFGNLISVIGGFLLASKGDIDYPLFLSTLLG FT VSLVVASGCVFNNYIDRDIDKIMERTKNRVLVKGLIDPKVSLIYASVLGIAGMLLLYVA FT ANALAMMLAVIGFVIYVGVYSLYMKRKSVYGTLIGSLSGAAPPVIGYCAVTGQFDTGAL FT ILLLIFSLWQMPHSYAIAIFRFKDYQAANIPVLPVIKGISVTKNHITLYILAFMVATLM FT LTLSGYAGYKYLVVAAAVSVWWLGMALRGYKATNDSVWARKLFVFSIIAITSLSVMMSV FT DFNVHSSAVLLTYAG" FT gene complement(115942..116274) FT /gene="cyoD" FT /locus_tag="YP516_1000" FT CDS complement(115942..116274) FT /codon_start=1 FT /transl_table=11 FT /gene="cyoD" FT /locus_tag="YP516_1000" FT /product="cytochrome o ubiquinol oxidase subunit IV" FT /EC_number="1.10.3.-" FT /note="GO_component: GO:0016021 - integral to membrane; FT GO_process: GO:0006118 - electron transport" FT /db_xref="InterPro:IPR014210" FT /db_xref="UniProtKB/TrEMBL:Q1CL74" FT /protein_id="EEO77339.1" FT /translation="MSHSTTTHGGASHGSLKSYIIGFVLSVILTVIPFVMVMSGTASYT FT TTLLTVVGLAVVQIVVHLVYFLHMNTSSEERWNLVALLFTAMIIAIVVVGSLWIMYNLN FT INMMVD" FT gene complement(116274..116888) FT /gene="cyoC" FT /locus_tag="YP516_1001" FT CDS complement(116274..116888) FT /codon_start=1 FT /transl_table=11 FT /gene="cyoC" FT /locus_tag="YP516_1001" FT /product="cytochrome o ubiquinol oxidase subunit III" FT /EC_number="1.10.3.-" FT /note="GO_component: GO:0016020 - membrane; GO_function: FT GO:0004129 - cytochrome-c oxidase activity; GO_process: FT GO:0006118 - electron transport" FT /db_xref="InterPro:IPR014206" FT /db_xref="UniProtKB/TrEMBL:Q1CL73" FT /protein_id="EEO77340.1" FT /translation="MSTETLTNHNVAHAEHGHHDAGATKVFGFWVYLMSDCILFATLFA FT TYAVLVNGTAGGPSGKELFDLNFVLVETFLLLFSSITYGVAMLGMSKGSVKQVNTWLGF FT TFLFGLGFIAMELYEFHKLIEEGYGPARSGFLSAYFALVGTHGLHVTAGLAWIIIMMIQ FT VARRGLNSTNRTRLMCLSLFWHFLDVVWICVFTVVYLLGAI" FT gene complement(116878..118869) FT /gene="cyoB" FT /locus_tag="YP516_1002" FT CDS complement(116878..118869) FT /codon_start=1 FT /transl_table=11 FT /gene="cyoB" FT /locus_tag="YP516_1002" FT /product="cytochrome o ubiquinol oxidase subunit I" FT /EC_number="1.10.3.-" FT /note="GO_component: GO:0016020 - membrane; GO_component: FT GO:0016021 - integral to membrane; GO_function: GO:0004129 FT - cytochrome-c oxidase activity; GO_function: GO:0020037 - FT heme binding; GO_function: GO:0005506 - iron ion binding; FT GO_process: GO:0009060 - aerobic respiration; GO_process: FT GO:0006118 - electron transport" FT /db_xref="InterPro:IPR014207" FT /db_xref="UniProtKB/TrEMBL:Q1CL72" FT /protein_id="EEO77341.1" FT /translation="MLGKLTLDAVPLGEPIIMVTVAAIIIGGAALVAALTYFGKWKWLW FT SEWLTSVDHKKIGIMYILVAMVMLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFT FT AHGVIMIFFMAMPFVVGLMNIVVPLQIGARDVAFPFLNSLSFWLFAVGVVLINISLGVG FT EFAQTGWLAYPPLSGIEYSPGVGVDYWIWSLQISGLGTLLTGVNFFATILKMRAPGMSM FT MKMPVFTWAAFCTNILIIVSFPILTVTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWA FT WGHPEVYILVLPVFGVFSEVTATFSRKRLFGYTSLVWATIAITVLSFIVWLHHFFTMGS FT GANVNAFFGIATMIISIPTGVKIFNWLFTMYQGRIQINSAMLWTIGFIVTFSIGGMTGV FT LLAVPGANFVLHNSLFLIAHFHNVIIGGVVFGCFAGLTYWWPKSFGFMLNEKWGIRAFW FT FWIIGFFVAFMPLYVLGFMGMTRRLSQDINPEFHTMLMVAAGGAALIACGILCQVIQVF FT VSIRDREQNRDLTGDPWGARTLEWSTSSPPPFYNFAVVPNVVDRDEFWDMKEKGEAYKR FT PAKYEEIHMPKNTGAGVIIAGFSLIFGFAMVWYIWWLAIIGFVGMIVTWIVKSFDEDVD FT YYVPAAEVERIENLHHEQISKAGVNHVN" FT gene complement(118874..119830) FT /gene="cyoA" FT /locus_tag="YP516_1003" FT CDS complement(118874..119830) FT /codon_start=1 FT /transl_table=11 FT /gene="cyoA" FT /locus_tag="YP516_1003" FT /product="cytochrome o ubiquinol oxidase subunit II" FT /note="GO_component: GO:0016021 - integral to membrane; FT GO_component: GO:0016020 - membrane; GO_function: FT GO:0005507 - copper ion binding; GO_function: GO:0004129 - FT cytochrome-c oxidase activity; GO_function: GO:0008827 - FT cytochrome o ubiquinol oxidase activity; GO_function: FT GO:0016682 - oxidoreductase activity, acting on diphenols FT and related substances as donors, oxygen as acceptor; FT GO_function: GO:0020037 - heme binding; GO_function: FT GO:0009486 - cytochrome bo3 ubiquinol oxidase activity; FT GO_process: GO:0006118 - electron transport" FT /db_xref="InterPro:IPR012141" FT /db_xref="UniProtKB/TrEMBL:Q1CL71" FT /protein_id="EEO77342.1" FT /translation="MRLKKYIKNMGILSLFAATVMLSGCNMVLMNPKGAIGVEQKTLIL FT TAIGLMLIVVIPVIFMAFAFAWKFRASNKSATYTPNWSHSNKIELVVWAVPIIIIAILA FT TITWKTTHELDPFKPIVVAGKDPITIEVVSLDWKWLFIYPEQGIATVNELAFPTGVPVN FT FKITSNSVMNSFFIPQLGGQIYAMAGMQTKLHLIANEPGKYNGISGSFSGQGFSGMKFT FT AIATPTQEDFNQWVEQVKKSPNTLNTTNDFEKLAKPSENNPVEYFSSIKPALFKGIIGK FT FMGDMNMPKNGHDMPKGMDMSQGMEMGEHTAHAGAEE" FT gene complement(120200..120967) FT /locus_tag="YP516_1004" FT /note="similar to yfeN" FT CDS complement(120200..120967) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1004" FT /product="putative exported protein" FT /db_xref="InterPro:IPR018013" FT /db_xref="UniProtKB/TrEMBL:Q1CL70" FT /protein_id="EEO77343.1" FT /translation="MRKILIGTAALATVTLAPSVQAEYQWGFGNVSLNYLDWTRSTTHK FT SGDSSHKDDFAYIELEGGAGFSWGEVYGFFDLENPFNSKTAQPGDNQRYTFKTTGRYYL FT GDSGFNLYGHVYGTYSLPGDNRNFHEVNTLYGIGYNAAFDALWLKPFVALHYVDQTYYS FT GNNGYVVGWVAGYDFTAFDEKFSITNWNELEFNRAEAYAAGNGGKNGINGAIALWWTPV FT KPLTTGIQYRYAYKKLGEDFLQDGIVYSIKYNF" FT gene 121164..121262 FT /locus_tag="YP516_1005" FT CDS 121164..121262 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1005" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C4GQK3" FT /protein_id="EEO77344.1" FT /translation="MGFICQVCFSDKHKKASAQTEQHRLYVTYVIY" FT gene complement(121259..122737) FT /gene="ampG" FT /locus_tag="YP516_1006" FT CDS complement(121259..122737) FT /codon_start=1 FT /transl_table=11 FT /gene="ampG" FT /locus_tag="YP516_1006" FT /product="muropeptide transporter" FT /note="GO_component: GO:0016021 - integral to membrane; FT GO_function: GO:0005215 - transporter activity; GO_process: FT GO:0006810 - transport" FT /db_xref="InterPro:IPR011701" FT /db_xref="UniProtKB/TrEMBL:Q1CL69" FT /protein_id="EEO77345.1" FT /translation="MPNRYSNLFTQRNSIILLLLGFASGLPLALTSGTLQAWMTVENVN FT LKTIGIFSLVGQAYVFKFLWSPLMDRYTPSFLGRRRGWLLVSQLLLIIAIIAMGFMEPA FT KHLWWLAAVAVLVAFCSASQDIVFDAYKTDLLTTEERGTGAAVSVLGYRLAMLVSGGLA FT LWIADRYLGWQSTYWLMAGLMLIGVFATLLAPEPDIRIAPPKTLEQAIVAPLRDFFGRN FT NAWLILLLIVFYKMGDAFAASLSTTFLIRGVGFDAGEVGLVNKTLGLIATIIGALYGGL FT LMQRLSLFRALMIFGILQAVSNMGYWLLAITDKNIFSMGSAIFLENLCGGMGTAAFVAL FT LMTLCNKSFSATQFALLSALSAVGRVYVGPIAGWFVEAHGWPLFYLFSIAAAIPGLLLL FT YVCRQTLDHTQKTDEFMPRIAFKTAYRWALRLLIIGGLLLSVWLILLICNALDWTSAPQ FT VADTLLLRGIQFSIVGMTLGGLLDYLALRRQKLA" FT gene complement(122855..123433) FT /gene="yajG" FT /locus_tag="YP516_1007" FT CDS complement(122855..123433) FT /codon_start=1 FT /transl_table=11 FT /gene="yajG" FT /locus_tag="YP516_1007" FT /product="predicted lipoprotein" FT /db_xref="InterPro:IPR005619" FT /db_xref="UniProtKB/TrEMBL:Q1CL68" FT /protein_id="EEO77346.1" FT /translation="MLKKILFPLLAIFILAGCATTSNTLNVTPKVVLPTQDPTLMGVTI FT SINGADQRQDAALAKVNRDGQLVVLTPSRDLRFLLQEVLEKQMTARGYMIGADGAVDLQ FT IVVNQLYADVQEGNLRYNITTKADISITATAKNGNKQVKNYRATYNVQGAFTATNEKIT FT DAVNSVLSDVIADMAQDTSVSSFIKQNAR" FT gene 123782..124102 FT /gene="bolA" FT /locus_tag="YP516_1008" FT CDS 123782..124102 FT /codon_start=1 FT /transl_table=11 FT /gene="bolA" FT /locus_tag="YP516_1008" FT /product="regulator of penicillin binding proteins and beta FT lactamase transcription (morphogene)" FT /note="GO_function: GO:0030528 - transcription regulator FT activity" FT /db_xref="InterPro:IPR002634" FT /db_xref="UniProtKB/TrEMBL:Q1CL67" FT /protein_id="EEO77347.1" FT /translation="MILIREQIEEKLKAAFVPDHLEVINESYRHNVPAGSESHFKIVIV FT SDKFQDQRFLSRHRSIYSVLADELAGSVHALALHTYTRKEWAGLQDTVPASPSCRGANT FT LA" FT gene 124243..124446 FT /locus_tag="YP516_1009" FT CDS 124243..124446 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1009" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C4GQK7" FT /protein_id="EEO77348.1" FT /translation="MPRERLMREFYRDNIRLLSSTHNLCAAIMSRLIFPEWFRDASDIW FT DTRFCNAAVPVLGGCFQSSHHS" FT gene 124519..125823 FT /gene="tig" FT /locus_tag="YP516_1010" FT CDS 124519..125823 FT /codon_start=1 FT /transl_table=11 FT /gene="tig" FT /locus_tag="YP516_1010" FT /product="peptidyl-prolyl cis/trans isomerase (trigger FT factor)" FT /EC_number="5.2.1.8" FT /note="GO_process: GO:0015031 - protein transport; FT GO_process: GO:0006457 - protein folding" FT /db_xref="InterPro:IPR008881" FT /db_xref="UniProtKB/Swiss-Prot:Q1CL66" FT /protein_id="EEO77349.1" FT /translation="MQVSVETTQGLGRRVTITVAADSIEKAVKSELVKAAKNVRIDGFR FT KGHVPMNIVEQRYGASVRQDVLGDLMQRNFVDAIIKEKINPAGAPNYVPGEYKQGEDFT FT YSVEFEVYPEVELKDLESIEVEKPVVEVNDADVDTMLETLRKQQATWKETDAAATAEDR FT ATLDFTGSIDGEEFEGGKATDFVLAMGQGRMIPGFEEGVIGHKAGEEFTIDVNFPEDYH FT AENLKGKSAKFAIVLKKVEVRELPELTEEFIKRFGVADGSLAGLRAEVRKNMERELKGA FT VRNRVKTQAIDGLVSANNIDVPTALVDGEIDVLRRQAAQRFGGNEKQAAELPRELFEEQ FT AKRRVVVGLLLGEVISQHELKADEDRVKALIEEMASAYEDPQEVIEFYSKNKELMNNMR FT NVALEEQAVETLLAKAKVTEKPTTFSELMNQTTAA" FT gene 126285..126908 FT /gene="clpP" FT /locus_tag="YP516_1011" FT /note="similar to lopP" FT CDS 126285..126908 FT /codon_start=1 FT /transl_table=11 FT /gene="clpP" FT /locus_tag="YP516_1011" FT /product="proteolytic subunit of ClpA-ClpP and ClpX-ClpP FT ATP-dependent serine proteases" FT /EC_number="3.4.21.92" FT /note="GO_function: GO:0008462 - endopeptidase Clp FT activity; GO_process: GO:0006508 - proteolysis" FT /db_xref="InterPro:IPR018215" FT /db_xref="UniProtKB/Swiss-Prot:Q1CL65" FT /protein_id="EEO77350.1" FT /translation="MSYSGERDQFAPNMALVPMVVEQTSRGERSYDIFSRLLKERIIFL FT TGQVEDHMANLITAQMLFLEAENPEKDIFLYINSPGGVITAGMSIYDTMQFIKPDVSTI FT CMGQACSMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGFQGQATDIEIHAKEILKVKSRM FT NELMAYHTGKSLEEIERDTERDRFLSAEQSVEYGLVDSVFTRRD" FT gene 127114..128385 FT /gene="clpX" FT /locus_tag="YP516_1012" FT /note="similar to lopC" FT CDS 127114..128385 FT /codon_start=1 FT /transl_table=11 FT /gene="clpX" FT /locus_tag="YP516_1012" FT /product="ATPase and specificity subunit of ClpX-ClpP FT ATP-dependent serine protease" FT /note="GO_function: GO:0046983 - protein dimerization FT activity; GO_function: GO:0008270 - zinc ion binding; FT GO_function: GO:0016887 - ATPase activity; GO_function: FT GO:0005524 - ATP binding; GO_function: GO:0005515 - protein FT binding; GO_function: GO:0017111 - FT nucleoside-triphosphatase activity; GO_function: GO:0000166 FT - nucleotide binding; GO_process: GO:0019538 - protein FT metabolic process; GO_process: GO:0015031 - protein FT transport" FT /db_xref="InterPro:IPR010603" FT /db_xref="UniProtKB/Swiss-Prot:Q1CL64" FT /protein_id="EEO77351.1" FT /translation="MTDKRKDGSGKLLYCSFCGKSQHEVRKLIAGPSVYICDECVDLCN FT DIIREEIKEVSPHRDRSSLPTPHEIRHHLDDYVIGQEPAKKVLAVAVYNHYKRLRNGDT FT SNGIELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQ FT KLLQKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIAAV FT PPQGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIGQRINTGSGIGFGAVVKGQSEKA FT TEGELLSQVEPEDLIKFGLIPEFIGRLPVVATLSELSEDALIQILKEPKNALTKQYQAL FT FSLEGVELEFRDEALTAIAKKAMARKTGARGLRSIVEGALLDTMYDLPSMDSVEKVVVD FT ESVIAGQSAPMLIYGQPEAQASGE" FT gene 128580..130934 FT /gene="lon" FT /locus_tag="YP516_1013" FT /note="similar to capR, deg, lopA, muc" FT CDS 128580..130934 FT /codon_start=1 FT /transl_table=11 FT /gene="lon" FT /locus_tag="YP516_1013" FT /product="DNA-binding ATP-dependent protease La" FT /EC_number="3.4.21.53" FT /note="GO_function: GO:0004252 - serine-type endopeptidase FT activity; GO_function: GO:0005524 - ATP binding; FT GO_function: GO:0004176 - ATP-dependent peptidase activity; FT GO_function: GO:0017111 - nucleoside-triphosphatase FT activity; GO_function: GO:0000166 - nucleotide binding; FT GO_process: GO:0006508 - proteolysis; GO_process: FT GO:0006510 - ATP-dependent proteolysis" FT /db_xref="UniProtKB/TrEMBL:C4GQL1" FT /protein_id="EEO77352.1" FT /translation="MNPERSERIEIPVLPLRDVVVYPHMVIPLFVGREKSIRCLEAAMD FT HDKRIMLVAQKEASTDEPGINDLFSVGTVASILQMLKLPDGTVKVLVEGLQRARITTLS FT DSGEHFAAQAEYLESPVMDDREQEVLVRTAINQFEGYIKLNKKIPPEVLASLHSIDDAA FT RLADTIAAHMPLKLNDKQAVLEMFDITERLEYLMAMMESEIDLLQVEKRIRNRVKKQME FT KSQREYYLNEQMKAIQKELGEMDDTPDEHEALKRKIEAAKMPKDAREKTEAELQKLKMM FT SPMSAEATVVRGYIDWMLQVPWNSRSKVKKDLVKAQEVLDTDHYGLERVKDRILEYLAV FT QSRVSKIKGPILCLVGPPGVGKTSLGQSIAKATGRQYVRMALGGVRDEAEIRGHRRTYI FT GSMPGKLIQKMAKVGVKNPLFLLDEIDKMASDMRGDPASALLEVLDPEQNVAFNDHYLE FT VDYDLSDVMFVATSNSMNIPAPLLDRMEVIRLSGYTEDEKLNIAKQHLLPKQFERNAIK FT KGELTIDDSAIMSIIRYYTREAGVRSLEREISKLCRKAVKNLLMDKTVKHIEINGDNLK FT DFLGVQKVDYGRADTENRVGQVTGLAWTEVGGDLLTIETACVPGKGKLTYTGSLGEVMQ FT ESIQAALTVVRARADKLGINPDFYEKRDIHVHVPEGATPKDGPSAGIAMCTALVSCLTG FT NPVRADVAMTGEITLRGLVLPIGGLKEKLLAAHRGGIKVVLIPDDNKRDLEEIPDNVIA FT DLEIHPVKRIDDVLAIALEHPAFGAQPVAPK" FT gene 131152..131424 FT /gene="hupB" FT /locus_tag="YP516_1014" FT /note="similar to hopD" FT CDS 131152..131424 FT /codon_start=1 FT /transl_table=11 FT /gene="hupB" FT /locus_tag="YP516_1014" FT /product="HU, DNA-binding transcriptional regulator, beta FT subunit" FT /note="GO_function: GO:0003677 - DNA binding" FT /db_xref="InterPro:IPR000119" FT /db_xref="UniProtKB/TrEMBL:Q1CL62" FT /protein_id="EEO77353.1" FT /translation="MNKSQLIDKIAAGADISKAAAGRALDAIITSVTESLKEGDDVALV FT GFGTFAVRERSARTGRNPQTGKEISIPAAKVPGFRAGKGLKDAVN" FT gene 131725..133611 FT /locus_tag="YP516_1015" FT CDS 131725..133611 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1015" FT /product="Peptidyl-prolyl cis-trans isomerase ppiD" FT /EC_number="5.2.1.8" FT /note="GO_function: GO:0016853 - isomerase activity; FT GO_function: GO:0003755 - peptidyl-prolyl cis-trans FT isomerase activity" FT /db_xref="InterPro:IPR000297" FT /db_xref="UniProtKB/TrEMBL:Q1CL61" FT /protein_id="EEO77354.1" FT /translation="MMDNLRAAANNVVLKIILALIMLSFILTGVGSYLIGGSNDYAAKV FT NDQDISRAQLEQAMQSERGRLQQKLGEQFSVLAANEGYMQQLRQQVLGQLINNVLLDQY FT ARKLGLTVSDEQVKESIRQIPDFQTGEHFDNNRYLALINQLGYTPEQFAQLQRQQLINQ FT QLLKAFSDTGFVLPIEVQAMSALVLQQRDVRLATLDLKALQAEQKVTDEELQAYYDQNK FT HNFIAPEQMKVSFIAMDAAAMQSNITVTEEDIAAYYDQNRSSYTQPERRNYSVIQFKTE FT VEAKAALDELKKGADFAVIAKEKSTDIISRNNGGELGWLEPETTPDEVKAANLSEKGQL FT SDVIKSSVGYLIVRLNDIKPELVKPLSEVHDELAKKLKQEKALDAYYALQQKVNDAATS FT DNESLASAEEVAGTKAQQTGWFTRDTVPAEINFKPVVQAIFDGRLVGENGSAGSNSEVI FT TVDGDRAFVIRIDGHKPEGIEPFDQVRDQISELVKRQKAEQQARVDGEKILTALKQGKG FT EEAMKSAGISFGEKKTLSYASVDDQLMQTIFALAHPQKDQPVYGLSQDRQGNIVLIELL FT SVTPGKLQESETKIFIEKMQEESVSMIFDALMANLHKQATIKIGPAEQQQPQ" FT gene 133751..134197 FT /locus_tag="YP516_1016" FT /note="similar to ybaV" FT CDS 133751..134197 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1016" FT /product="putative exported protein" FT /db_xref="InterPro:IPR004509" FT /db_xref="UniProtKB/TrEMBL:Q1CL60" FT /protein_id="EEO77355.1" FT /translation="MKFLGKLFAITVLLTGLNIHSFAYAAPAASTDNTQDKVSKKSPNS FT AADNGAKVKGTPAQSVEKISDNTKNVAADSSVNASDNQQHQININSANAEQLAQFLNGI FT GRKKAEAIITYREQSGPFTHVDQLLEVPGLGPSFLERNNGKIKL" FT gene complement(134314..134433) FT /locus_tag="YP516_1017" FT CDS complement(134314..134433) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1017" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C4GQL5" FT /protein_id="EEO77356.1" FT /translation="MIRITVLNHRPNQPNKMLIIMLVKAARPIPTDGQHRLAA" FT gene 134551..134958 FT /locus_tag="YP516_1018" FT CDS 134551..134958 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1018" FT /product="hypothetical protein" FT /note="GO_function: GO:0003824 - catalytic activity; FT GO_function: GO:0016787 - hydrolase activity" FT /db_xref="InterPro:IPR006684" FT /db_xref="UniProtKB/TrEMBL:Q1CL59" FT /protein_id="EEO77357.1" FT /translation="MHTHIKVRGFHIDVFQHVNNARYLEFLEEARWEWLDGQPVFQWMV FT EHQIAFIVVNINISYRRPAVLGDLLRIDSQLLKLNGKSGVMKHTITLEPTAIPVVDAEL FT TFVCIDQRSQKALPLEGELREKLEELVNRGA" FT gene complement(135044..135742) FT /gene="queC" FT /locus_tag="YP516_1019" FT CDS complement(135044..135742) FT /codon_start=1 FT /transl_table=11 FT /gene="queC" FT /locus_tag="YP516_1019" FT /product="enzyme in preQ0 biosynthesis" FT /EC_number="3.5.-.-" FT /note="GO_function: GO:0005524 - ATP binding; GO_function: FT GO:0004055 - argininosuccinate synthase activity; FT GO_process: GO:0006526 - arginine biosynthetic process" FT /db_xref="InterPro:IPR014729" FT /db_xref="UniProtKB/Swiss-Prot:Q1CL58" FT /protein_id="EEO77358.1" FT /translation="MKRAVVVFSGGQDSTTCLIQALQQYDEVHCITFDYGQRHRTEIDV FT ARELALQLGATAHKVLDVGMLNELAVSSLTRDSIPVPSYDANADGALPSTFVPGRNILF FT LTLASIYAYQVQAQAVITGVCETDFSGYPDCRDEFIKALNHAIDLGIGRDIAFITPLMW FT LDKAETWALADYYQQLDLIRHHTLTCYNGIKGDGCGQCAACHLRAKGLASYMANKQQVI FT LNLKQKVGLA" FT gene complement(136007..137710) FT /locus_tag="YP516_1020" FT CDS complement(136007..137710) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1020" FT /product="Oligopeptide ABC transporter, periplasmic FT oligopeptide-binding protein OppA" FT /note="TC:3.A.1.5.1; GO_function: GO:0005215 - transporter FT activity; GO_function: GO:0008270 - zinc ion binding; FT GO_function: GO:0008237 - metallopeptidase activity; FT GO_process: GO:0006810 - transport; GO_process: GO:0006508 FT - proteolysis" FT /db_xref="InterPro:IPR006025" FT /db_xref="UniProtKB/TrEMBL:Q1CL57" FT /protein_id="EEO77359.1" FT /translation="MRIIHRLTQYERLYQKFGDHPVATTVADVASLLFCSERHARTLIQ FT QLQMKSWLSWHSQVGRGKRAQLQCLKKPDALRAIYLQQFLEQGDHQAAFSIAQLEPERL FT QTLLTPHMGGQWQADSPILRIPYYRELEPLNPMNASGRAEQHLIYTLHAGLTRFNTGDP FT LPKPDLAHHWQISADGLTWQFFLRSQLRWHNGDHIHGKQLLQTLEILRANRRSHPSFAN FT IVTITLPHALCLQFTLSQPDYWLAHRLADLPCRLFHPDDPFLGAGPFKLATFDKHLVRL FT KQHEFYHLQHPYLDIIEYWITPSLTVNSTNGSCQHPVRITIGQEEEFPLARPVQRGMSL FT GFCYLAINRHRSNLTPQQIAKLLMLVQTSGILEALSISRDVITPCHEILPGWPIPQFST FT DENPSLPACLVLTYQPPMELESVAEQLKIVLAAHGCTLEIRACHDKQWQDVDKIKESDL FT LLADHLVGESPEATMESWLRLDPLWRGILQNEQWNQQQKTLTFIQQIESAPERFRQLQA FT HYDDLMLAGLILPLFNYEYQVNAPSRINGVTLTAYGWFDFCQAWLPPITN" FT gene 137815..138636 FT /locus_tag="YP516_1021" FT CDS 137815..138636 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1021" FT /product="putative haloacid dehalogenase-like hydrolase" FT /note="GO_function: GO:0003824 - catalytic activity; FT GO_function: GO:0016787 - hydrolase activity; GO_process: FT GO:0008152 - metabolic process" FT /db_xref="InterPro:IPR000150" FT /db_xref="UniProtKB/Swiss-Prot:Q1CL56" FT /protein_id="EEO77360.1" FT /translation="MYRLAAFDMDGTLLMRDHKIGSITLNALHQLADAGVTLTFATGRH FT YLDMKGILSHSGLNGYLITGNGTRVCDAEGNPLYGMDLPAELVEFVLRTPWQTNASIHL FT FRDDGWFTDRNDPDLLIAHTTSGFHFQLTEWDELPLTGNHKFCFIASHQELVELKAQLE FT QQMGGEADFCFSATDCLEVLPRGCNKGVALEKLSHHLDLTLADCMAFGDAMNDKEMLSR FT VGRGLVMGNALPQLKQELPQLQIIGRCEQQGVAHYLHHWLSSPHLTYSPEF" FT gene complement(138848..139888) FT /locus_tag="YP516_1022" FT CDS complement(138848..139888) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1022" FT /product="putative Pyridoxal-phosphate dependent protein" FT /EC_number="2.5.1.47" FT /note="GO_function: GO:0003824 - catalytic activity; FT GO_function: GO:0030170 - pyridoxal phosphate binding; FT GO_function: GO:0004124 - cysteine synthase activity; FT GO_process: GO:0008152 - metabolic process" FT /db_xref="InterPro:IPR001926" FT /db_xref="UniProtKB/TrEMBL:Q1CL55" FT /protein_id="EEO77361.1" FT /translation="MTNTWVKNAINEIEADFQRSADTHLIRLNLSAFPGIYLYLKDEST FT HPTGSLKHRLARSLFLYGLCNGWITEGTTIIEASSGSTAVSEAYFARLIGLPFIAVMPS FT GTTRRKVEQITFYGGRCHFVDHAGQIYAASEQLARDLNGHYMDQFTYAERATDWRGNNN FT IADSIFRQMAREPFPTPDYIVMSAGTGGTSATLGRYIRYQGHDTQLVVVDPENSVFYDC FT FCTRDRTVTGRCGSRIEGIGRPRAEPSFIPEVIDSMLRVPDAASIATLHWLESILSRKV FT GASTGTNVWGALQLAKQMREQGKSGAIVTLLCDSGERYLDTYYNEEWVSNNIGDLTPFT FT NELNNL" FT gene 140014..140475 FT /gene="ybaO" FT /locus_tag="YP516_1023" FT CDS 140014..140475 FT /codon_start=1 FT /transl_table=11 FT /gene="ybaO" FT /locus_tag="YP516_1023" FT /product="predicted DNA-binding transcriptional regulator" FT /note="GO_component: GO:0005622 - intracellular; FT GO_function: GO:0043565 - sequence-specific DNA binding; FT GO_function: GO:0003700 - transcription factor activity; FT GO_process: GO:0006355 - regulation of transcription, FT DNA-dependent" FT /db_xref="InterPro:IPR019888" FT /db_xref="UniProtKB/TrEMBL:Q1CL54" FT /protein_id="EEO77362.1" FT /translation="MLDKTDRKLLRMLQEDCTQSLHVLADAVNLTSTPCWKRLKRLEDE FT GFIRGRVALLDSEKLGLGLTAFVLIKTQQHNSDWYQEFVAFTKQMPEVLAFYRMAGEYD FT YLMQVEVADMKSYDRFYKRMVNGVPGLIDVTSSFAMEKIKYTTVLPVPE" FT gene 140577..142343 FT /gene="mdlA" FT /locus_tag="YP516_1024" FT /note="similar to mdl" FT CDS 140577..142343 FT /codon_start=1 FT /transl_table=11 FT /gene="mdlA" FT /locus_tag="YP516_1024" FT /product="predicted ATP-binding component of multidrug ABC FT transporter" FT /note="GO_component: GO:0016021 - integral to membrane; FT GO_function: GO:0016887 - ATPase activity; GO_function: FT GO:0005524 - ATP binding; GO_function: GO:0017111 - FT nucleoside-triphosphatase activity; GO_function: GO:0000166 FT - nucleotide binding; GO_function: GO:0042626 - ATPase FT activity, coupled to transmembrane movement of substances; FT GO_process: GO:0006810 - transport" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q1CL53" FT /protein_id="EEO77363.1" FT /translation="MRLFAQLGWYFRREWHRYVGAVLLLIIIAILQLIPPKLVGVIVDD FT ISTKQMSTNMLLVWIGVMLATAVVVYLLRYVWRVLLFGASYQLAVELRSDFYRQLSRQT FT PGFYSRHRTGDLMARATNDVDRVVFAAGEGVLTLVDSLVMGCAVLIVMSTQISWQLTLL FT SLLPMPIMAIVIKYYGDQLHQRFKSAQGAFSLLNNQAQESLTSIRMIKAFGLEDRQSQQ FT FAQVAAETGAKNMYVARIDARFDPTIYIAIGIANLLAIGGGSWMVVNNSITLGQLTSFV FT MYLGLMIWPMLALAWMFNIVERGSAAYSRIRSLLDEAPVVKDGHITLSDVRDTLAVNIR FT HFCYPGSDQPALHNVVLTLVPGAMLGLCGPTGSGKSTLLALIQRQFDIDDGVICYQGHP FT LSDIRLNDWRGRLSVVSQTPFLFSDTVAGNIALGKPDATPAQIEQAARLACVHEDILRL FT PQGYDTEVGERGVMLSGGQKQRISIARALLLDAEILILDDALSAVDGQTEHEILKNLRE FT WGEQRTVIISAHRLSALTEASEILVMQHGGVMQRGPHSLLVNQTGWYREMYRYQQLEAA FT LDDGEQEVEADE" FT gene 142336..144159 FT /gene="mdlB" FT /locus_tag="YP516_1025" FT /note="similar to mdl" FT CDS 142336..144159 FT /codon_start=1 FT /transl_table=11 FT /gene="mdlB" FT /locus_tag="YP516_1025" FT /product="predicted ATP-binding component of multidrug ABC FT transporter" FT /EC_number="3.6.3.44" FT /note="GO_component: GO:0016021 - integral to membrane; FT GO_function: GO:0017111 - nucleoside-triphosphatase FT activity; GO_function: GO:0000166 - nucleotide binding; FT GO_function: GO:0016887 - ATPase activity; GO_function: FT GO:0042626 - ATPase activity, coupled to transmembrane FT movement of substances; GO_function: GO:0005524 - ATP FT binding; GO_process: GO:0006810 - transport" FT /db_xref="InterPro:IPR017940" FT /db_xref="UniProtKB/TrEMBL:Q1CL52" FT /protein_id="EEO77364.1" FT /translation="MNNVQQLWPTLKRLLSYGSPYRKPLGLAVLMLWVAAAAEVSGPLL FT ISYFIDHVVAKGTLPLGLVSGLALAYLLLQLLAATLHYFQALLFNRAAVGVVQRLRIDV FT MDAALRQPLSAFDTQPVGQLISRVTNDTEVIKDLYVMVVSTVLKSAALISAMLVAMFSL FT DWRMALISICIFPAVLVVMTIYQRYSTPIVRRVRSYLADINDGFNEVINGMGVIQQFRQ FT QARFGERMASASRAHYVARMQTLRLEGFLLRPLLSLFSALVLCGLLLLFGFSPEGSVGV FT GVLYAFINYLGRLNEPLIELTSQQSIMQQAVVAGERIFDLMDRAQQGYGSDNIPLSSGR FT IQVENVSFAYRSDKMVLHNISLNVPSRGFVALVGHTGSGKSTLANLLMGYYPVQQGEIL FT LDGRPLSRLSHQVLRQGVALVQQDPVVLADSFFANITLGRDLSEQQVWEALETVQLAPL FT VRTLPDGLYSLLGEQGNTLSVGQKQLLAMARVLVQAPQILILDEATANIDSGTEQAIQR FT ALQVIRKNTTLVVIAHRLSTIVEADSILVLHRGVAVEQGNHQALLAARGRYYQMYQLQL FT VSEDLAAIDQEAIDKGSIDQSTIDQAGMSVS" FT gene 144569..144907 FT /gene="glnK" FT /locus_tag="YP516_1026" FT CDS 144569..144907 FT /codon_start=1 FT /transl_table=11 FT /gene="glnK" FT /locus_tag="YP516_1026" FT /product="nitrogen assimilation regulatory protein for FT GlnL, GlnE, and AmtB" FT /note="GO_function: GO:0030234 - enzyme regulator activity; FT GO_process: GO:0006808 - regulation of nitrogen FT utilization" FT /db_xref="InterPro:IPR017918" FT /db_xref="UniProtKB/TrEMBL:Q1CL51" FT /protein_id="EEO77365.1" FT /translation="MKLVTVVIKPFKLEDVREALSSVGIQGLTVTEVKGFGRQKGHAEL FT YRGAEYSVNFLPKVKIDIAIADDQLDEVIDVISKAAYTGKIGDGKIFVAELQRVIRIRT FT GETDEAAL" FT gene 144947..146236 FT /locus_tag="YP516_1027" FT CDS 144947..146236 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1027" FT /product="Ammonium transporter" FT /note="GO_component: GO:0016020 - membrane; GO_function: FT GO:0008519 - ammonium transmembrane transporter activity; FT GO_process: GO:0006810 - transport" FT /db_xref="InterPro:IPR018047" FT /db_xref="UniProtKB/TrEMBL:Q1CL50" FT /protein_id="EEO77366.1" FT /translation="MKKLLSVLGLGTVALLPSWAMAAAPAVADKADNAFMMICTALVLF FT MTIPGIALFYGGLLRSKNVLSMMTQVMVSFALVCVLWILYGYSLAFSAGNAFFGSFDMA FT MLKGIELTSLSGSFYQYIHVVFQASFACITVALIVGSFAERIRFSAVLIFAALWFTFSY FT LPIAHMVWGGGFLAMDGALDFAGGTVVHINAAVAGLVGAYLLGKRAGFGKEAFKPHNLP FT MVFTGTAILYIGWFGFNAGSASAANEIAALAFLNTVVATAGAILSWVFAEWALRGKPSL FT LGACSGCIAGLVAITPAAGTVGVGGALIIGLVGGVAGLWGVVLLKKWLRVDDTCDVFGV FT HGVCGIVGCILTGVFTSASLGGTGYAAGVTMGHQVGVQLFSVGVTVVWSGVVAFVAFKI FT AGLIVGLRVPEEQEREGLDVNSHGENAYNQ" FT gene complement(146496..147356) FT /gene="tesB" FT /locus_tag="YP516_1028" FT CDS complement(146496..147356) FT /codon_start=1 FT /transl_table=11 FT /gene="tesB" FT /locus_tag="YP516_1028" FT /product="acyl-CoA thioesterase II" FT /note="GO_function: GO:0016291 - acyl-CoA thioesterase FT activity; GO_process: GO:0006637 - acyl-CoA metabolic FT process" FT /db_xref="InterPro:IPR003703" FT /db_xref="UniProtKB/TrEMBL:Q1CL49" FT /protein_id="EEO77367.1" FT /translation="MSQALEKLLDLLDLEKIEEGIFRGQSEDLGLRQVFGGQVVGQAIY FT AAKQTVPAERTVHSFHSYFLRPGDSSKPIIYDVETLRDGNSFSARRVSAIQNGKPIFYM FT TASFQSQEEGFEHQNTMPDVPPPEGLMSETDIARQFSHLIPEKVREKFIGPQPIEMRPV FT KFHNPLQGSVEEPNRYVWFRANGKMPDDLRVHQYLLGYASDFNFLPTALQPHGIGFLEP FT GMQIATIDHSMWFHRPFRLDDWLLYAVESTSASGARGFVRGQIYNREGVLVASTVQEGV FT IRLHR" FT gene 147355..147447 FT /locus_tag="YP516_1029" FT CDS 147355..147447 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1029" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C4GQM7" FT /protein_id="EEO77368.1" FT /translation="MLSPLMVEFIHSVLNQPASRQYIAVKPLLK" FT gene 147613..148134 FT /gene="ybaY" FT /locus_tag="YP516_1030" FT CDS 147613..148134 FT /codon_start=1 FT /transl_table=11 FT /gene="ybaY" FT /locus_tag="YP516_1030" FT /product="predicted outer membrane lipoprotein" FT /db_xref="UniProtKB/TrEMBL:Q1CL48" FT /protein_id="EEO77369.1" FT /translation="MKPWQPKALWQIVGGAALAVSLTGCAHQSAEAPVAAPISTATVAA FT SVAQSTVHGTVNIRERVALPPDAVVTVTLSDISLADAPSRVIAQKAVRTEGKQAPFTYS FT LPFNPSDIQPNARVIVSAAITRNGQLLFITDTIQEVINRGAGTQADLLLVPVPSVALEI FT VPAPAAATIQ" FT gene complement(148270..148815) FT /locus_tag="YP516_1031" FT CDS complement(148270..148815) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1031" FT /product="putative 6-O-methylguanine DNA methyltransferase FT family protein" FT /note="GO_function: GO:0003824 - catalytic activity; FT GO_process: GO:0006281 - DNA repair" FT /db_xref="UniProtKB/TrEMBL:C4GQM9" FT /protein_id="EEO77370.1" FT /translation="MVSCPVNAHIKLNLFSTGIKSPIVQGIHIAVSDNIAVSNNRPRKS FT SVKRENAVSPPESRHSDQDEYQEPDYTAEQNTPPVADSFRQRVFHVVAAIPYGQVATYG FT DIAQLIGSPRAARQVGGVLKRLPEGSALPWHRVINRYGEISLTGDDYLRQKKALVAEGI FT CLDAAGRINLQQYRWRYS" FT gene 148901..149013 FT /gene="ffs" FT /locus_tag="YP516_1032" FT ncRNA 148901..149013 FT /gene="ffs" FT /locus_tag="YP516_1032" FT /product="4.5S RNA" FT /function="RNA component of the signal recognition particle FT (SRP), with Ffh protein" FT /ncRNA_class="SRP_RNA" FT gene complement(149547..149750) FT /gene="hha" FT /locus_tag="YP516_1033" FT /note="similar to ymoA" FT CDS complement(149547..149750) FT /codon_start=1 FT /transl_table=11 FT /gene="hha" FT /locus_tag="YP516_1033" FT /product="hemolysin expression modulating protein" FT /db_xref="InterPro:IPR007985" FT /db_xref="UniProtKB/TrEMBL:Q1CL46" FT /protein_id="EEO77371.1" FT /translation="MTKTDYLMRLRKCTTIDTLERVIEKNKYELSDDELELFYSAADHR FT LAELTMNKLYDKIPPTVWQHVK" FT gene complement(149799..150167) FT /locus_tag="YP516_1034" FT CDS complement(149799..150167) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1034" FT /product="putative cytoplasmic protein" FT /db_xref="InterPro:IPR019693" FT /db_xref="UniProtKB/TrEMBL:Q1CL45" FT /protein_id="EEO77372.1" FT /translation="MDEYSPKRHDIAQLKFLCESLYDEGIATLGDSHHGWINDPTSAIN FT LQLNDLIEHIASFVMSFKIKYPDGSQLSELVEEYLDDTYTLFSSYGINDPELRRWQKTK FT EHLFRLFSGEYVCTLMKT" FT gene complement(150326..150679) FT /locus_tag="YP516_1035" FT CDS complement(150326..150679) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1035" FT /product="hypothetical protein" FT /note="GO_component: GO:0005783 - endoplasmic reticulum" FT /db_xref="InterPro:IPR000886" FT /db_xref="UniProtKB/TrEMBL:Q1CL44" FT /protein_id="EEO77373.1" FT /translation="MNNEIVGDFVSGHYSVSLLKDVIRNNIHSIEESLVSGLMYYSEDA FT RYTLGSLEILEIKNLKENQYSMTYQYNWYIFNACLDINTEEFLTNTVTFIVHPEKIVFD FT IISNDRPSPADEL" FT gene complement(151553..151696) FT /locus_tag="YP516_1036" FT CDS complement(151553..151696) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1036" FT /product="putative ribosomal protein L36" FT /note="GO_component: GO:0005840 - ribosome; GO_component: FT GO:0005622 - intracellular; GO_function: GO:0003735 - FT structural constituent of ribosome; GO_process: GO:0006412 FT - translation" FT /db_xref="InterPro:IPR000473" FT /db_xref="UniProtKB/Swiss-Prot:Q1CL43" FT /protein_id="EEO77374.1" FT /translation="MQVLSSLRSAKNRHPDCKIVRRRGRVYVICKSNPRFKAVQGGTHK FT KR" FT gene complement(151712..151972) FT /locus_tag="YP516_1037" FT /note="similar to ykgM" FT CDS complement(151712..151972) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1037" FT /product="putative ribosomal protein" FT /note="GO_component: GO:0005840 - ribosome; GO_component: FT GO:0005622 - intracellular; GO_function: GO:0003735 - FT structural constituent of ribosome; GO_process: GO:0006412 FT - translation" FT /db_xref="InterPro:IPR002150" FT /db_xref="UniProtKB/Swiss-Prot:Q1CL42" FT /protein_id="EEO77375.1" FT /translation="MKPNIHPPYRTVVFHDTSADAYFTVGSTIATERTIERDGQTYPYV FT TLDISSASHPYYTGKQKEFAKEGSTARFHQRFGSFLTKKTN" FT gene complement(152158..155310) FT /gene="acrB" FT /locus_tag="YP516_1038" FT /note="similar to acrE" FT CDS complement(152158..155310) FT /codon_start=1 FT /transl_table=11 FT /gene="acrB" FT /locus_tag="YP516_1038" FT /product="multidrug efflux protein" FT /note="GO_component: GO:0005886 - plasma membrane; FT GO_component: GO:0016021 - integral to membrane; FT GO_function: GO:0015562 - efflux transmembrane transporter FT activity; GO_function: GO:0005215 - transporter activity; FT GO_process: GO:0006810 - transport" FT /db_xref="InterPro:IPR004764" FT /db_xref="UniProtKB/TrEMBL:Q1CL41" FT /protein_id="EEO77376.1" FT /translation="MAKFFIDRPIFAWVIAIIIMLAGALAIMKLPVAQYPTIAPPAITI FT AANYPGADATTVQNTVTQVIEQNMNGIDNLLYMSSSSDSSGNVQLTLTFNSGTDPDIAQ FT VQVQNKLQLAMPLLPQEVQQQGVSVEKSSSSFLMVAGFISEDGTMQQEDIADYVGSNIK FT DPISRTPGVGDVQLFGSQYAMRIWMDPHKLNNYKLTPVDVINAIKIQNNQVAAGQLGGT FT PPVPGQELNSSIIAQTRLTNAEEFSQILLKVNTDGSQVRLKDVAIVKLGAESYNIIARY FT NGKPAAGIGIKLATGANALNTSAAVKAELAKLQPFFPSGLTVVYPYDTTPFVKISINEV FT VKTLIEAIILVFLVMYLFLQNFRATLIPTIAVPVVLLGTFAILSAFGYSINTLTMFGMV FT LAIGLLVDDAIVVVENVERVMQEEGLPPKEATKKSMEQIQGALVGIALVLSAVFVPMAF FT FGGATGAIYRQFSITIVSAMVLSVLVALILTPALCATMLKPIKKGDHGPKTGFFGWFNN FT MFEKSTHHYTDSVANILRSTGRYLVIYLAIVIGMAVLFMRLPSSFLPEEDQGVFLTMVQ FT LPAGATQERTQKVLNHVTDYYLDKEKNVVNSVFTVNGFGFSGQGQNTGLAFVSLKNWDE FT RKGEQNKVPAIVSRASAAFSKIKDGMVFAFNLPAIVELGTATGFDFQLIDQGNLGHQQL FT TDARNQLLGMAAQHPDMLVGVRPNGLEDTPQFKVEVDQEKAQALGVAISDINTTLGSAM FT GGSYVNDFIDRGRVKKVYVQADAPFRMLPDDIDKWYVRNNMGQMVSFATFSTAKWEYGS FT PRLERYNGLPSMEILGQAAPGKSTGEAMDLMQELAAKLPSGVGYDWTGMSYQERLSGNQ FT APALYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVVGALLAATLRGLENDVYFQVGL FT LTTIGLSAKNAILIVEFAKDLMDKEGKGLVESTLESVRMRLRPILMTSLAFILGVMPLV FT ISSGAGSGAQNAVGTGVMGGMITATVLAIFFVPLFFVVVRRRFSRKTDDIEHSHPVNTP FT VK" FT gene complement(155327..156514) FT /gene="acrA" FT /locus_tag="YP516_1039" FT /note="similar to mtcA" FT CDS complement(155327..156514) FT /codon_start=1 FT /transl_table=11 FT /gene="acrA" FT /locus_tag="YP516_1039" FT /product="multidrug efflux protein" FT /note="GO_component: GO:0005886 - plasma membrane; FT GO_component: GO:0016020 - membrane; GO_function: FT GO:0005215 - transporter activity; GO_function: GO:0008565 FT - protein transporter activity; GO_process: GO:0006810 - FT transport; GO_process: GO:0051701 - interaction with host; FT GO_process: GO:0009306 - protein secretion" FT /db_xref="InterPro:IPR006143" FT /db_xref="UniProtKB/TrEMBL:Q1CL40" FT /protein_id="EEO77377.1" FT /translation="MSKNRGVMPLAAILVLSGSLVLIGCNDKDAAQAGAQQAPEVGVVT FT LKAEPLNITTDLPGRTSAFRVAEVRPQVSGIILKRNYIEGSDVTAGTSLYQIDPATYQA FT AYDSAKGDLAKAQASAQIAHLTVNRYKPLLGTNYISKQEYDQALSDAQQADATVLAAKA FT ALESARINLAYTQVRSPISGRTGKSAVTEGALVTSGQASAMTTVQQLDPMYVDVTQSSD FT EFLRLKKELADGILKQENGKAKVRLLLENGVEYTETGTLEFSGVTVDETTGSITLRAIF FT PNPNEALLPGMFVRARLDEGIRPDALLVPQQGVTRNPRGEATAMVVGAGNKVEMRTLIA FT NQAIGNKWLVTEGLKAGDRLIISGLQKIKPGVEVKVQEVTDTAPETAPADTAKKS" FT gene 156659..157315 FT /gene="acrR" FT /locus_tag="YP516_1040" FT CDS 156659..157315 FT /codon_start=1 FT /transl_table=11 FT /gene="acrR" FT /locus_tag="YP516_1040" FT /product="DNA-binding transcriptional repressor" FT /note="GO_function: GO:0030528 - transcription regulator FT activity; GO_function: GO:0003677 - DNA binding; FT GO_function: GO:0003700 - transcription factor activity; FT GO_process: GO:0045449 - regulation of transcription; FT GO_process: GO:0006355 - regulation of transcription, FT DNA-dependent" FT /db_xref="InterPro:IPR013572" FT /db_xref="UniProtKB/TrEMBL:Q1CL39" FT /protein_id="EEO77378.1" FT /translation="MARKTKQKAEETRQQILDAAVREFSAHGVSRTSLTDIAIAAGVTR FT GAIYWHFKNKVDLFNEVWELSESKIDQLEIEYQAKYPDNPLRILRELLIYILVSTREDR FT RRRALMEIVFHKCEFVGEMTSVHDARKVLDLASYERIESVLQGCIDANQLPVNLNTHRA FT AIIMRAYITGLMENWLFMPESFDIKQEAPVLIDAYLEMLGQSFSLRNEMNSRVSD" FT gene 157328..157681 FT /locus_tag="YP516_1041" FT CDS 157328..157681 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1041" FT /product="putative ACR protein" FT /db_xref="InterPro:IPR003787" FT /db_xref="UniProtKB/TrEMBL:Q1CL38" FT /protein_id="EEO77379.1" FT /translation="MHSLVIIANGAAYGHESLFNALRLSIALKEQQTDLDLRLFLMSDA FT VIAGLNGQQPREGYNLQQMLEILTAQNVPIKLCKTCADARGIAGLTLVDGVEIGTLVEL FT AQWTLAAEKVLTF" FT gene 157977..161339 FT /locus_tag="YP516_1042" FT /note="similar to aefA, kefA" FT CDS 157977..161339 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1042" FT /product="putative potassium efflux system" FT /note="GO_component: GO:0016020 - membrane" FT /db_xref="UniProtKB/TrEMBL:C4GQN9" FT /protein_id="EEO77380.1" FT /translation="MFTLVIIVLLLFSSTFVFGISAFASGINVDVPTRSEVQSQLDLLS FT KQKILSPAEKLAQQDLTQTLEYLDTIERTKQEANQLKQQLAQAPAKLRQATEGLEALKS FT SSADTMTKESLANYSLRQLESRLNETLDNLQSAQEDLSAYNSQLIALQTQPERVQSAMY FT SASMRLMQIRNQLNGLTPNQESLRPTQQQELLAEQVMLNGQLDLERKNLEANTTLQDLL FT QKQRDYTTAHINQLERYVQLLQEVVSGKRLILSEKTVKEAQAQTDGSDIQNDPLISREL FT AINKELSERLINATKEGNTLVQQNIRVKNWLDRALQSERNLKEQITVLRGSLLLSRILY FT QQQLNLPASGLITNMGPRIADLRLEQFEINQQRDKLFQGDDYIQTLMESSKEKVDPNVE FT DALGQIVDIRRELLDQLNKQLGNQLTLAINLQINQQQLLSVNESLQHTLTQQIFWVSSN FT KPMDWSWLKALPGAIKTELSNFQVTLSLGDALAGLLKSLVFLIPMLVVAVVIRSRYHMI FT NTYLDQLAADIGQLKRDSQMHTPKAILLTVLKILPNVLLILGIGYWCLRSDFNLSGLLW FT SFFQRLALFWLVFELTYRMLSPGGITERHFMISTDRCAHYRRQIVRLGAALLPVIFWSV FT LGERSPLRLVDDVIGQIVIVIALALLALFIFPFCRDSWREKDSHAVRLVIITAITATPI FT VLMGLMVAGYFYTTLQLAGRWIDSLYLLFLWNIVYLTAIRGLGVAARRLAYRRAIARRQ FT SMGKEGAEGSEPIEEPPLALDQINQQSLRLTTMALFLIFATCFYWIWADLITVISYLDS FT ISLWHYTATVAGASVTQAVTLGNMLVALMALVVAYVLTRNLPGLLEVVVLSRLQLRQGT FT SYAITTILTYLITAVGGITALSSLGVSWDKLQWLVAALSVGLGFGLQEIFANFVSGLII FT LFERPVRIGDTITIGTYSGTVSRIRIRATTITDFDRKEVIVPNKAFVTERLINWSLSDT FT ITRIIIKVGVAYGSDLEKVKEVLLQAAHANSRVMTDPEPQVFFLNFGSSTLDHELRLYV FT RELRDRSYTVDELNRAIDKLCRENDINIAFNQLDVYLHKPDGTEVQEISRPIEATSLPA FT TQSMLGKPKPDLP" FT gene complement(161679..161834) FT /gene="ybaM" FT /locus_tag="YP516_1043" FT CDS complement(161679..161834) FT /codon_start=1 FT /transl_table=11 FT /gene="ybaM" FT /locus_tag="YP516_1043" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR019630" FT /db_xref="UniProtKB/TrEMBL:Q1CL36" FT /protein_id="EEO77381.1" FT /translation="MSVEQAPPELQLAVDLIYLLECNEIAPETALAALAIVQLDYQRKL FT RHKESD" FT gene complement(162005..162541) FT /gene="priC" FT /locus_tag="YP516_1044" FT CDS complement(162005..162541) FT /codon_start=1 FT /transl_table=11 FT /gene="priC" FT /locus_tag="YP516_1044" FT /product="primosomal replication protein n''" FT /db_xref="InterPro:IPR010890" FT /db_xref="UniProtKB/TrEMBL:Q1CL35" FT /protein_id="EEO77382.1" FT /translation="MSTEKLLQVLESQIEALSAQIAPQANTPSQQARFDLNLFSNHGNR FT FRDYLQEVRKNMTQLKQVVEENRLQQVAFLADKLVAQISALQRELATQKIRKSNPEPRE FT HQSDPYHKLAEHQDYERRILAMIQDRESQLGRQSLLVEQQKIQKELAALEGRLMRCRQA FT LIRIERSIEKKENGF" FT gene 162742..163122 FT /locus_tag="YP516_1045" FT CDS 162742..163122 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1045" FT /product="Hypothetical protein DUF454" FT /db_xref="InterPro:IPR007401" FT /db_xref="UniProtKB/TrEMBL:Q1CL34" FT /protein_id="EEO77383.1" FT /translation="MSRWLLIALGWLAVVLGTLGVVLPLLPTTPFLLLAAWCFARSSPR FT FHHWLLYRSWFGSYLRTWQQHRALPPGTKWKAVLVTVMTFAVSLWLVKIWWVKGMLLLM FT LIVLLTFMLRMPVIDPSQQKRH" FT gene 163361..163924 FT /gene="apt" FT /locus_tag="YP516_1046" FT CDS 163361..163924 FT /codon_start=1 FT /transl_table=11 FT /gene="apt" FT /locus_tag="YP516_1046" FT /product="adenine phosphoribosyltransferase" FT /EC_number="2.4.2.7" FT /note="GO_function: GO:0003999 - adenine FT phosphoribosyltransferase activity; GO_function: GO:0016740 FT - transferase activity; GO_process: GO:0006168 - adenine FT salvage; GO_process: GO:0009116 - nucleoside metabolic FT process" FT /db_xref="InterPro:IPR000836" FT /db_xref="UniProtKB/Swiss-Prot:Q1CL33" FT /protein_id="EEO77384.1" FT /translation="MTVSASKTAQQLKYIKDSIKTIPDYPKAGILFRDVTSLLENPKAY FT SASIKLLSEHYSESGVTKVVGTEARGFLFGAPVALALGVGFVPVRKPGKLPRETISESY FT ELEYGTDTLEIHTDSIQPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVVHAAFIINLP FT ELGGEARLTQQGIHCYSLVSFDGH" FT gene complement(164032..164136) FT /locus_tag="YP516_1047" FT CDS complement(164032..164136) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1047" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C4GQP4" FT /protein_id="EEO77385.1" FT /translation="MVAEKMAETQGYDDIKPEFVWLEYLNYLGRHPAS" FT gene 164580..166556 FT /gene="dnaX" FT /locus_tag="YP516_1048" FT /note="similar to dnaZ, dnaZX" FT CDS 164580..166556 FT /codon_start=1 FT /transl_table=11 FT /gene="dnaX" FT /locus_tag="YP516_1048" FT /product="DNA polymerase III/DNA elongation factor III, tau FT and gamma subunits" FT /EC_number="2.7.7.7" FT /note="GO_component: GO:0009360 - DNA polymerase III FT complex; GO_function: GO:0005524 - ATP binding; FT GO_function: GO:0003887 - DNA-directed DNA polymerase FT activity; GO_function: GO:0003677 - DNA binding; FT GO_function: GO:0017111 - nucleoside-triphosphatase FT activity; GO_function: GO:0000166 - nucleotide binding; FT GO_process: GO:0006260 - DNA replication" FT /db_xref="InterPro:IPR012763" FT /db_xref="UniProtKB/TrEMBL:Q1CL32" FT /protein_id="EEO77386.1" FT /translation="MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSG FT TRGVGKTSIARLLAKGLNCETGITATPCGTCANCQEIEQGRFVDLIEIDAASRTKVEDT FT RELLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEPPAHVKFLLATTDPQKLP FT VTILSRCLQFHLKALDVEQIRAQLEKVLLAEQITSDARALQLLARAADGSMRDALSLTD FT QAVSMGQGQVTTVTVSQMLGTLDDEQPLAIIEALVSADGARVMAQIEQAASRGVDWENL FT LVESLSLLHKIAMVQLLPSMLDNHYAAIEPRLRELARTLPPADIQLYYQTLLVGRKELA FT YAPDRRMGVEMTLLRALAFHPKAIIAEPQIAHVAAPSAIADNAVPTSQGGQHRQEPASV FT PPSSHQEAPPLGAVASSVQLPESTAQLLQARTQLLRQSGTTTTKKNEPAAPGKARPANS FT ALERLASVTERSQQRLAAKTTEEKKPAKKEAYRWTAKNQPEVAAEPIATPKALRSALEH FT EKTPELSAKLAEEAIARDPWAAEVNKLQLPKLVQQLALNAFKQEIEPGNICLHLRSAQR FT HLNSASAQKALSDALSELHGNAVTLSVIEDDNPAERTPLEWRQAIYEEKLAQARQSIIA FT DNNIQTLRRFFDAELDEDSIRPI" FT gene 166612..166944 FT /gene="ybaB" FT /locus_tag="YP516_1049" FT CDS 166612..166944 FT /codon_start=1 FT /transl_table=11 FT /gene="ybaB" FT /locus_tag="YP516_1049" FT /product="conserved protein" FT /db_xref="InterPro:IPR004401" FT /db_xref="UniProtKB/Swiss-Prot:Q1CL31" FT /protein_id="EEO77387.1" FT /translation="MFGKGGIGNLMKQAQQMQEKMQQMQEEVAKLEVTGESGAGLVKVT FT INGAHNCRRVEIDPSLLVEDDKEMLEDLIAAALNDAARRIDETQKEKMASVSNGMQLPP FT GFKMPF" FT gene 166944..167549 FT /gene="recR" FT /locus_tag="YP516_1050" FT CDS 166944..167549 FT /codon_start=1 FT /transl_table=11 FT /gene="recR" FT /locus_tag="YP516_1050" FT /product="gap repair protein" FT /note="GO_function: GO:0003676 - nucleic acid binding; FT GO_process: GO:0006310 - DNA recombination; GO_process: FT GO:0006281 - DNA repair; GO_process: GO:0006304 - DNA FT modification" FT /db_xref="InterPro:IPR015967" FT /db_xref="UniProtKB/Swiss-Prot:Q1CL30" FT /protein_id="EEO77388.1" FT /translation="MQTSPLLESLMEALRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQ FT ALTRAMSEIGHCADCRTFTEQEHCTICLNPRRQQNGQICVVESPADIHAIEQTGQFGGR FT YFVLMGHLSPMDGIGPGDIGLDLLEKRLSTEAISEVILATNPTVEGDATANYIGQMCGQ FT YGILASRIAHGVPVGGELEMVDGTTLSHSLAGRNPIKY" FT gene 167564..167722 FT /locus_tag="YP516_1051" FT CDS 167564..167722 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1051" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q1CL29" FT /protein_id="EEO77389.1" FT /translation="MGDDLIIDYLTDNFIQNNKSIAPDSLFFLLYRLKLPLLAPFDLHC FT SILSACW" FT gene 167741..169615 FT /gene="htpG" FT /locus_tag="YP516_1052" FT CDS 167741..169615 FT /codon_start=1 FT /transl_table=11 FT /gene="htpG" FT /locus_tag="YP516_1052" FT /product="molecular chaperone HSP90 family" FT /note="GO_function: GO:0051082 - unfolded protein binding; FT GO_function: GO:0005524 - ATP binding; GO_process: FT GO:0006457 - protein folding" FT /db_xref="InterPro:IPR001404" FT /db_xref="UniProtKB/Swiss-Prot:Q1CL28" FT /protein_id="EEO77390.1" FT /translation="MNMKGQETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAA FT DKLRFRALSNPELFEGDGELRVRLSFDKEKRTLTLSDNGIGMTRDEVIDNLGTIAKSGT FT KAFLESIGSDQAKDSQLIGQFGVGFYSAFIVADKVTVRTRAAGAPADTGVFWESAGEGD FT YTIADITKDERGTEITLHLREGEDEYLDDWRLRSVISKYSDHIALPVEIQVKNEEDGTV FT TWEKINKAQALWTRGKAEISDDEYKAFYKHIAHDFTDPLSWSHNRVEGKQEYTSLLYIP FT AQAPWDMWNRDHKHGLKLYVQRVFIMDEAEQFMPNYLRFVRGLIDSNDLPLNVSREILQ FT DSRITQNLRSALTKRVLQMLEKLAKDDAEKYQQFWQQFGMALKEGPAEDGSNKETIAKL FT LRFASTHTDSSAQTVSLEDYVSRMAEGQEKIYYITADSYAAAKSSPHLELFRKKGIEVL FT LLSDRIDEWMMSYLTEFEGKAFQSVSKADDSLNKLADEENPEQQEAEKALEPFVERVKT FT LLGERVKDVRLTHRLTDTPAIVTTDADEMSTQMAKLFAAAGQQAPEVKYIFELNPDHGL FT VKRAAEVTDDTQFAQWVELLLDQALLAERGTLEDPNQFIRRMNQLLTA" FT gene 169842..170486 FT /gene="adk" FT /locus_tag="YP516_1053" FT /note="similar to dnaW, plsA" FT CDS 169842..170486 FT /codon_start=1 FT /transl_table=11 FT /gene="adk" FT /locus_tag="YP516_1053" FT /product="adenylate kinase" FT /EC_number="2.7.4.3" FT /note="GO_function: GO:0016776 - phosphotransferase FT activity, phosphate group as acceptor; GO_function: FT GO:0019201 - nucleotide kinase activity; GO_function: FT GO:0005524 - ATP binding; GO_function: GO:0019205 - FT nucleobase, nucleoside, nucleotide kinase activity; FT GO_function: GO:0004017 - adenylate kinase activity; FT GO_process: GO:0006139 - nucleobase, nucleoside, nucleotide FT and nucleic acid metabolic process" FT /db_xref="InterPro:IPR007862" FT /db_xref="UniProtKB/Swiss-Prot:Q1CL27" FT /protein_id="EEO77391.1" FT /translation="MRIILLGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKAGSEL FT GLKAKEIMDAGKLVTDELVIALVKERITQEDCRDGFLLDGFPRTIPQADAMKEAGIKVD FT YVLEFDVPDELIVERIVGRRVHAASGRVYHVKFNPPKVEDKDDVTGEELTIRKDDQEAT FT VRKRLIEYHQQTAPLVSYYHKEADAGNTQYFKLDGTRNVAEVSAELATILG" FT gene 170576..171538 FT /locus_tag="YP516_1054" FT CDS 170576..171538 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1054" FT /product="Ferrochelatase, protoheme ferro-lyase" FT /EC_number="4.99.1.1" FT /note="GO_function: GO:0004325 - ferrochelatase activity; FT GO_process: GO:0006783 - heme biosynthetic process" FT /db_xref="InterPro:IPR019772" FT /db_xref="UniProtKB/Swiss-Prot:Q1CL26" FT /protein_id="EEO77392.1" FT /translation="MMQSKPGVLMVNLGTPDAPTSKAIKRYLAEFLSDRRVVDTSPLLW FT WPLLHGVILPLRSPRVAKLYQSVWMEEGSPLLVYSRRQQKALAARMPDIPVELGMSYGS FT PNLPEAIEKLLAQGVTNLVILPLYPQYSCSTSAAVWDAVARVLKGYRRLPSISFIRDYA FT EHPAYISALKQSVERSFAEHGQPDRLVMSFHGIPKRYAQLGDDYPIRCEDTSRALRAAL FT PLPAEKIIMTYQSRFGREPWLTPYTDETLKSLPSQGVKHIQLICPGFSADCLETLEEIK FT EQNREFFLHAGGEKFEYIPALNDDEGHIALLEQLIRHNI" FT gene 172136..173125 FT /gene="ddhD" FT /locus_tag="YP516_1055" FT /note="similar to ascD, rfbI" FT CDS 172136..173125 FT /codon_start=1 FT /transl_table=11 FT /gene="ddhD" FT /locus_tag="YP516_1055" FT /product="cdp-6-deoxy-delta-3,4-glucoseen reductase" FT /EC_number="1.17.1.-" FT /note="GO_function: GO:0050660 - FAD binding; GO_function: FT GO:0051537 - 2 iron, 2 sulfur cluster binding; GO_function: FT GO:0016491 - oxidoreductase activity; GO_function: FT GO:0051536 - iron-sulfur cluster binding; GO_function: FT GO:0009055 - electron carrier activity; GO_process: FT GO:0006118 - electron transport" FT /db_xref="InterPro:IPR017927" FT /db_xref="UniProtKB/TrEMBL:Q1CL25" FT /protein_id="EEO77393.1" FT /translation="MSLNVKLHPSGIIFTSDGTSTILDAALDSNIHIEYSCKDGTCGSC FT KAILISGEVDSAENTFLTEEDVAKGAILTCCSKAKSDIELDVNYYPELSHIQKKTYPCK FT LDSIEFIGEDIAILSLRLPPTAKIQYLAGQYIDLIINGQRRSYSIANAPGGNGNIELHV FT RKVVNGVFSNIIFNELKLQQLLRIEGPQGTFFVREDNLPIVFLAGGTGFAPVKSMVEAL FT INKNDQRQVHIYWGMPAGHNFYSDIANEWAIKHPNIHYVPVVSGDDSTWTGATGFVHQA FT VLEDIPDLSLFNVYACGSLAMITAARNDFINHGLAENKFFSDAFVPSK" FT gene 173163..173936 FT /gene="ddhA" FT /locus_tag="YP516_1056" FT CDS 173163..173936 FT /codon_start=1 FT /transl_table=11 FT /gene="ddhA" FT /locus_tag="YP516_1056" FT /product="glucose-1-phosphate cytidylyltransferase" FT /EC_number="2.7.7.33" FT /note="GO_function: GO:0047343 - glucose-1-phosphate FT cytidylyltransferase activity; GO_function: GO:0016779 - FT nucleotidyltransferase activity; GO_process: GO:0009058 - FT biosynthetic process" FT /db_xref="UniProtKB/TrEMBL:C4GQQ3" FT /protein_id="EEO77394.1" FT /translation="MKAVILAGGLGTRLSEETVVKPKPMVEIGGKPILWHIMKLYSSYG FT INDFVICCGYKGYVIKEYFANYFMHMSDITFCMRDNEMIVHQKRVEPWNVTLVDTGEDS FT MTGGRLRRVKDYVKDDEAFCFTYGDGVSDVNIAELIEFHKSHGKQATLTATYPPGRFGA FT LDIKDKQVRSFKEKPKGDGALINGGYFVLSPKVIDLIDGDKSTWEQEPLMTLAAQGELM FT AFEHAGFWQPMDTLRDKIYLHELWEEGRAPWKVWE" FT gene 173941..175015 FT /pseudo FT /gene="ddhB" FT /locus_tag="YP516_4738" FT CDS 173941..175015 FT /pseudo FT /codon_start=1 FT /transl_table=11 FT /gene="ddhB" FT /locus_tag="YP516_4738" FT /note="CDP-D-glucose-4,6-dehydratase (pseudogene)" FT gene 175033..176346 FT /gene="ddhC" FT /locus_tag="YP516_1059" FT CDS 175033..176346 FT /codon_start=1 FT /transl_table=11 FT /gene="ddhC" FT /locus_tag="YP516_1059" FT /product="putative FT CDP-4-keto-6-deoxy-D-glucose-3-dehydratase" FT /note="GO_function: GO:0030170 - pyridoxal phosphate FT binding; GO_function: GO:0003824 - catalytic activity" FT /db_xref="InterPro:IPR015422" FT /db_xref="UniProtKB/TrEMBL:Q1CL21" FT /protein_id="EEO77395.1" FT /translation="MSQEELRQQIAELVAQYAETAMAPKPFEAGKSVVPPSGKVIGTKE FT LQLMVEASLDGWLTTGRFNDAFEKKLGEYLGVPYVLTTTSGSSANLLALTALTSPKLGV FT RALKPGDEVITVAAGFPTTVNPTIQNGLIPVFVDVDIPTYNVNASLIEAAVSDKTKAIM FT IAHTLGNLFDLAEVRRVADKYNLWLIEDCCDALGSTYDGKMAGTFGDIGTVSFYPAHHI FT TMGEGGAVFTQSAELKSIIESFRDWGRDCYCAPGCDNTCKKRFGQQLGSLPFGYDHKYT FT YSHLGYNLKITDMQAACGLAQLERIEEFVEKRKANFKYLKDALQSCADFIELPEATENS FT DPSWFGFPITLKEDSGVSRIDLVKFLDEAKVGTRLLFAGNLTRQPYFHDVKYRVVGELT FT NTDRIMNQTFWIGIYPGLTHDHLDYVVSKFEEFFGLNF" FT gene 176383..177240 FT /gene="prt" FT /locus_tag="YP516_1060" FT /note="similar to rfbS" FT CDS 176383..177240 FT /codon_start=1 FT /transl_table=11 FT /gene="prt" FT /locus_tag="YP516_1060" FT /product="paratose synthase" FT /EC_number="1.-.-.-" FT /note="GO_function: GO:0005488 - binding; GO_function: FT GO:0003824 - catalytic activity; GO_function: GO:0050662 - FT coenzyme binding; GO_process: GO:0008152 - metabolic FT process; GO_process: GO:0044237 - cellular metabolic FT process" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q1CL20" FT /protein_id="EEO77396.1" FT /translation="MKILITGVSGYLGSQLANALMLEHEVVGTVRAGSVCNRITDIGNV FT NLINVTDSGWIDKVLSFSPDVVINTAALYGRKGELLSELVDANIQFPLRILEMLVSTGK FT GLFFQCGTSLPADVSQYALTKNQFTELAREYCNKFSGKFIELKLEHFFGPFDDSTKFTT FT YVINSCRSHSDLKLTAGLQRRDFIYINDLINAFKIMISKSESLISGESISIGSGHAVTI FT KEFVETVAKMTSYQGNLQFGAIPTRENELMYSCASLARIQELGWLCQYSLNSAIKDTLN FT RMRV" FT gene 177241..178524 FT /gene="wbyH" FT /locus_tag="YP516_1061" FT CDS 177241..178524 FT /codon_start=1 FT /transl_table=11 FT /gene="wbyH" FT /locus_tag="YP516_1061" FT /product="putative O-antigen synthesis protein, WbyH" FT /db_xref="UniProtKB/TrEMBL:Q1CL19" FT /protein_id="EEO77397.1" FT /translation="MDMKFCKNRYINTVILGAGVAGLGAALKAREVNIEYEIFEAKASA FT GGLLDNFVIDGYRFDNAVHLSFATEEKVRDIFDRTPYFSHSPDAVNFETDKWLKHPVQN FT NLYPLPAIEKVTLIESLIHRPESELADNYESWLIHQYGNEIAKRYPMRYTRKYWQCNAN FT ELSVSWIGNRLRRAKLSEILYGAFTDDTPNDYYAKEMRYPKKGGFKSFIQPLIDESIIN FT YNYEVTEIDLSGKTIKFSNGVIISYENLINTLPLPLFIEFCGANVPTSVKKSASKLEAT FT SLDLISVGFNKSIIKDLWFYIYDEDIYASRAYSPSVKSSDNVPDGCSSLQFEIYNPGRD FT SQYTVQELKDNVMYAMKKMGVANDEDIVFLHHKRLPWGNVVFKKDMEKYRDIVREYIFD FT NQVKSVGRFGEWDYLWSNQSFLSGYSSI" FT gene 178598..179941 FT /gene="wzx" FT /locus_tag="YP516_1062" FT CDS 178598..179941 FT /codon_start=1 FT /transl_table=11 FT /gene="wzx" FT /locus_tag="YP516_1062" FT /product="putative O-unit flippase" FT /db_xref="UniProtKB/TrEMBL:C4GQQ7" FT /protein_id="EEO77398.1" FT /translation="MKISSQMVWGLLNQGCNIFIPFVIMFMSYKYLPLEMASVWVIFLS FT MISLITLFDFGLSPAIVRNVSYVISGAQNLVKRGIDDIIIKDVISYPLLSRLLFDIKRI FT YLYLSLIAFFIIVIGGLWYFYYISPLDIKIEVAYSWVLFSSALIINLIYLYYVPVLTGL FT GEIENSYKANVFGRIIWFFLSLLVFIFSPSILLLSLSFVFSVFINRYLCYFFYIRNSHV FT KAIDKTEMEKKSTVPFIGHNAAKLGVVSLGSFLINRSTTLIVGIVCPIVTAGQFVLSMQ FT VFFALMAISNILLSIKIPEISQAVAKREHYTVKILIYKVVAFSSSIYLLGFVTFLILAE FT YVLPTIGVSLSFLPLDYLLILGLIYFLEMNHSICATIITSKNNVPFVFVSLFSGGLIIL FT LSIMLSVHFKYGVVGLILAQGIVQLMYNNWKWPLMVYSEFIKNNIEDR" FT gene 179952..180665 FT /locus_tag="YP516_1063" FT CDS 179952..180665 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1063" FT /product="putative glycosyltransferase" FT /db_xref="InterPro:IPR001173" FT /db_xref="UniProtKB/TrEMBL:Q1CL17" FT /protein_id="EEO77399.1" FT /translation="MKSNIIIDNSNSDDVLLTIAIPTYKRFGLLKETLKSVFSLEFNIP FT VEVIVVDNDPEHPELVLSEMAEFERYDFIYYKNIENYGMFGNWNQCLNLGRGKLITILH FT DDDLLCANFPRELERFLKEHGCHDDIPLIGFGHHLLDQRKSEDKVNKNILYKISKNIFN FT IYRKYLIKPKVVSITLNEIFWGNIFSGTLGVVMDRNKALSISGFDERNYPVSDYDFWIR FT WIQKYEARCYFRFYN" FT gene 181045..182187 FT /gene="wbyJ" FT /locus_tag="YP516_1064" FT CDS 181045..182187 FT /codon_start=1 FT /transl_table=11 FT /gene="wbyJ" FT /locus_tag="YP516_1064" FT /product="putative mannosyltransferase" FT /db_xref="UniProtKB/TrEMBL:Q1CL16" FT /protein_id="EEO77400.1" FT /translation="MILRKFFIICDTVYPDDSGGRKLSLGRIFEAKESGFKVSVLHYNY FT TNSDVSIARQFFLEHNIDYFYYIPAFSHKKSNLVRCANYISSVIKLTPEPYYYIMKDYG FT FKKFVLDNFEMSKNSTLSIESILLSGLLPWFNTFEGSIELVFHNVESDFYRQLSISSRS FT ITYKIFFFIESMKLSAIEKYLFNIKDENIYFVFLSEKDLEKYRLIFPEFQADIFINKNN FT LFIKEKIKRSVNFNKPFFLFPGGLNFPPNRYSLNWFLAAMSKRVSSLGVDILVTGSFND FT DIKSQFSQYSCVKLVGYVSDIQLRELQSSCIAVISPIITGGGVKIKNIEAIKLKIPLIA FT TKFSCEGIDERGANIYITDDEPGSFYITMKSVLNKTMSYK" FT gene 182184..183405 FT /pseudo FT /locus_tag="YP516_1065" FT CDS 182184..183405 FT /pseudo FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1065" FT /note="O-antigen polymerase (pseudogene); a single FT nucleotide insertion within a deoxythymidine octamer FT following codon 142 relative to wzy from Yersinia FT pseudotuberculosis IP32953 results in a frameshift leading FT to termination after codon 146." FT gene 183654..184667 FT /gene="wbyK" FT /locus_tag="YP516_1066" FT CDS 183654..184667 FT /codon_start=1 FT /transl_table=11 FT /gene="wbyK" FT /locus_tag="YP516_1066" FT /product="putative mannosyltransferase" FT /note="GO_process: GO:0009058 - biosynthetic process" FT /db_xref="InterPro:IPR001296" FT /db_xref="UniProtKB/TrEMBL:Q1CL14" FT /protein_id="EEO77401.1" FT /translation="MKIIYDGIINSLQNMGGVTVYFSELVSRLPATDFYWYSYADEISG FT FGVGNVKIKSRLLERYRNFSLDTINYNSLSVFHSSYYRLPDFDIPIVTTVHDFTYEKFV FT NGPAKWVHSWQKNRAVNNSDLIICVSENTAKDLQMYCSVPSNKIRVIYNGVSDKYHYIK FT GVKITTNKVIFVGARGGYKNFDIAVKAISKTPHLELSVVGGGAFTSKELSLLNHYLPGR FT YHGLGRLSDEALNEAYNSAYALLYPSSYEGFGIPILEAMSAGCPVISVNVSSIPEVAGD FT AAILVQKPTIDELVDGLLAVESERSKLIGYGMKQAAKFSWDKCYQETLDVYKELNK" FT gene 184683..185201 FT /locus_tag="YP516_1067" FT CDS 184683..185201 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1067" FT /product="GDP-mannose 4,6-dehydratase" FT /EC_number="4.2.1.47" FT /note="overlaps CDS with the same product name; FT GO_component: GO:0005622 - intracellular; GO_function: FT GO:0008446 - GDP-mannose 4,6-dehydratase activity; FT GO_function: GO:0005488 - binding; GO_function: GO:0003824 FT - catalytic activity; GO_function: GO:0050662 - coenzyme FT binding; GO_process: GO:0019673 - GDP-mannose metabolic FT process; GO_process: GO:0008152 - metabolic process; FT GO_process: GO:0044237 - cellular metabolic process" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q1CL13" FT /protein_id="EEO77402.1" FT /translation="MTKIALITGITGQDGSYLAEFLLEKGYEVHGIKRRASSFNTSRID FT HIYQDRHETNPRFFLHYGDLTDTSNLIRLVQEIQPDEIYNLGAQSHVAVSFESPEYTAD FT VDAMGTLRLLEAIRINGLEKKTRFYQASTSELYGLVQETPQRETTPFYPRSPLCCCQNV FT CLLDYSKLP" FT gene 185119..185805 FT /locus_tag="YP516_1068" FT CDS 185119..185805 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1068" FT /product="GDP-mannose 4,6-dehydratase" FT /EC_number="4.2.1.47" FT /note="overlaps CDS with the same product name; FT GO_component: GO:0005622 - intracellular; GO_function: FT GO:0005488 - binding; GO_function: GO:0008446 - GDP-mannose FT 4,6-dehydratase activity; GO_function: GO:0050662 - FT coenzyme binding; GO_function: GO:0003824 - catalytic FT activity; GO_process: GO:0008152 - metabolic process; FT GO_process: GO:0019673 - GDP-mannose metabolic process; FT GO_process: GO:0044237 - cellular metabolic process" FT /db_xref="InterPro:IPR001509" FT /db_xref="UniProtKB/TrEMBL:Q1CL12" FT /protein_id="EEO77403.1" FT /translation="MKQRHSIRVLLYAVAKMYAYWITVNYRESYGMYACNGILFNHESP FT RRGETFVTRKITRAVANIALGLEKCLYLGNIDSLRDWGHAKDYVRMQWMMLQQDKPEDF FT VIATGKQITVREFVRMSAREAGIELEFSGEGVEEVATVVAVNGNHISSVNIGDVIVRVD FT PRYFRPAEVETLLGDPTKAKKVLGWVPEITVEEMCAEMVASDLEQAKQHALLKANGFDV FT SISLEN" FT gene 185811..186776 FT /locus_tag="YP516_1069" FT CDS 185811..186776 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1069" FT /product="GDP-L-fucose synthetase; Colanic acidbiosynthesis FT protein wcaG" FT /EC_number="1.1.1.271" FT /note="GO_function: GO:0005488 - binding; GO_function: FT GO:0003824 - catalytic activity; GO_function: GO:0050662 - FT coenzyme binding; GO_function: GO:0050577 - GDP-L-fucose FT synthase activity; GO_process: GO:0008152 - metabolic FT process; GO_process: GO:0044237 - cellular metabolic FT process" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q1CL11" FT /protein_id="EEO77404.1" FT /translation="MDKKRVFIAGHRGMVGSAIVRQLENRNDIELIIRDRTELDLMSQS FT AVQKFFATEKIDEIYLAAAKVGGIQANNNYPAEFIYQNLMIECNIIHAAHLAGIQKLLF FT LGSSCIYPKLAAQPMTEEALLTGVLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMP FT TNLYGENDNFHPENSHVIPALLRRFHEAKIRNDKEMVVWGTGKPMREFLHVDDMAAASV FT HVMELSDQIYQTNTQPMLSHINVGTGVDCTIRELAETMAKVVGFTGNLVFDSTKPDGTP FT RKLMDVSRLAKLGWCYQISLEVGLTMTYQWFLAHQNNFRK" FT gene 186963..188369 FT /gene="manC" FT /locus_tag="YP516_1070" FT /note="similar to rfbM" FT CDS 186963..188369 FT /codon_start=1 FT /transl_table=11 FT /gene="manC" FT /locus_tag="YP516_1070" FT /product="mannose-1-phosphate guanylyltransferase" FT /EC_number="2.7.7.22" FT /note="GO_function: GO:0016779 - nucleotidyltransferase FT activity; GO_function: GO:0008928 - mannose-1-phosphate FT guanylyltransferase (GDP) activity; GO_process: GO:0005976 FT - polysaccharide metabolic process; GO_process: GO:0009058 FT - biosynthetic process" FT /db_xref="InterPro:IPR014710" FT /db_xref="UniProtKB/TrEMBL:Q1CL10" FT /protein_id="EEO77405.1" FT /translation="MLLPVIMAGGAGSRLWPLSRALYPKQFLALTSDLTMLQETLLRLD FT GLPHLAPLVICNEEHRFIIAEQLRQKNLVHSGIVLEPVGRNTAPAIALAALRATMSGDD FT PLLLVLAADHVIQDKLAFIRAVQRAEPLAEAGKLVTFGIVPKSPETGYGYIRQGKQVVD FT GAYQVAAFVEKPDLITAERYLASGDYYWNSGMFVFKASRYLQELDLHRPDILAACKQAI FT AGQHTDLDFIRLNEEAFSSCPDESIDYAVMEKTSDAVVVPLDAQWNDVGCWSALWEINT FT KDDHGNVIRGDVLIEDTNNSYVYSQNRLIATVGINDLVIVETKDAILVAHKDKVQNVKG FT IVGQLKLESRCEYLQHREVYRPWGSHDAIAEGVRYHVQHVTVKPGQRIATQIHYHRAEH FT WIVVSGIAKVHYGKETYLVNENESTYIPVGIAHSIENPGQIPLEIIEVHTGNYISEDDV FT ERIDDLGVGY" FT gene 188372..189115 FT /gene="wbyL" FT /locus_tag="YP516_1071" FT CDS 188372..189115 FT /codon_start=1 FT /transl_table=11 FT /gene="wbyL" FT /locus_tag="YP516_1071" FT /product="probable glycosyltransferase" FT /db_xref="InterPro:IPR001173" FT /db_xref="UniProtKB/TrEMBL:Q1CL09" FT /protein_id="EEO77406.1" FT /translation="MKISIITATYNSERTISDTLSSLEKQTYLDVEYIIVDGASKDNTL FT TVISQNSTRVTKIISESDQGIYDALNKGIDLATGDIIGFLHSDDLLAYPGALSDIVETF FT EKQQCDAVYGDLQYVAKNDLNKVIRCWKSGFFNHEKMKYGWMPPHPTFYMKRDLYIRFG FT GFDLSYKISADYDSLTRYIINYKIKIAYLPKVIIKMRVGGISNRSLGSMLLKSKEDIQI FT MKLRGLFWPMSFLCKNLSKLPQFLK" FT gene 189120..190493 FT /gene="manB" FT /locus_tag="YP516_1072" FT /note="similar to manB1, rfbK" FT CDS 189120..190493 FT /codon_start=1 FT /transl_table=11 FT /gene="manB" FT /locus_tag="YP516_1072" FT /product="phosphomannomutase" FT /EC_number="5.4.2.8" FT /note="GO_function: GO:0016868 - intramolecular transferase FT activity, phosphotransferases; GO_function: GO:0004615 - FT phosphomannomutase activity; GO_process: GO:0005975 - FT carbohydrate metabolic process" FT /db_xref="InterPro:IPR016066" FT /db_xref="UniProtKB/TrEMBL:Q1CL08" FT /protein_id="EEO77407.1" FT /translation="MPKLTCFKAYDIRGRLGDELNEDIAYRIGRAYGEFAKPKKVVVGG FT DVRLTSESLKLALSQGLQDAGTDVLDIGLSGTEEIYFSTFHLGVDGGIEVTASHNPIDY FT NGMKLVREGSRPISGDTGLRDIQYLAEQNEFPPVDSEKRGGYKKISIINDYVEHLINYI FT NPSLFKPLKLVVNTGNGAAGHVIDALEKRFSELKIPITLIKIHHEPDGTFPNGIPNPLL FT PECRQDTTDAVLMHDADMGIAFDGDFDRCFFFNNKGEFIEGYYIVGLLAEAFLQKNAGA FT KIIHDPRLSWNTIDIVNSSGGTPIMSKTGHAFIKERMREEDAVYGGEMSAHHYFRDFAY FT CDSGMIPWLLIAELLCVKEKSLEQLVEERMRIYPASGEINSKLTDPTSAIARVRAEYEV FT KAIAIDETDGISMEFDGWRFNLRSSNTEPVVRLNVESHYNKTLMHHKTAEILSLLRKE" FT gene complement(190629..191837) FT /locus_tag="YP516_1073" FT CDS complement(190629..191837) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1073" FT /product="putative transposase" FT /note="GO_function: GO:0004803 - transposase activity; FT GO_function: GO:0003677 - DNA binding; GO_process: FT GO:0006313 - transposition, DNA-mediated" FT /db_xref="InterPro:IPR001207" FT /db_xref="UniProtKB/TrEMBL:Q1CC83" FT /protein_id="EEO77408.1" FT /translation="MDEKKLKALAAELAKGLKTEADLNAFSRMLTKLTVETALNAELTE FT HLGHEKNTPKSGSNTRNGYSSKTLLCDDGEIELNTPRDRENTFEPQLIKKNQTRITQMD FT SQILSLYAKGMTTREIVATFKEMYDADVSPTLISKVTDAVKEQVAEWQNRQLDALYPIV FT YMDCIVVKVRQNGSVINKAVFLALGINTEGQKELLGMWLAENEGAKFWLSVLTELKNRG FT LQDILIACVDGLKGFPDAINSVYPQTHIQLCIIHMVRNSLKYVSWKDYKAVTSGLKMVY FT QAPTEEAALMALDKFAEAWDDKYPQISKSWRTHWENLNTFFGYPPDIRKAIYTTNAIES FT VNSVIRAAIKKRKVFPTDDSVRKVVYLAIKDASKKWSMPIQNWRLAMSRFIIEFGDRLS FT DHL" FT gene 192038..193015 FT /locus_tag="YP516_1074" FT CDS 192038..193015 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1074" FT /product="regulator of length of O-antigen component of FT lipopolysaccharide chains" FT /note="GO_component: GO:0016020 - membrane; GO_process: FT GO:0009103 - lipopolysaccharide biosynthetic process" FT /db_xref="InterPro:IPR003856" FT /db_xref="UniProtKB/TrEMBL:Q1CL05" FT /protein_id="EEO77409.1" FT /translation="MVSYILPPKWTSTAIIALPGDEQVQVLDELITNLTVLDIKVDVSA FT NYLLSTFKQNFDSQDLREQYLVNTNYFKRLMKNNPEDGLDKRALIERIVNENISSVNPL FT KDKTEGENEYRYYKLSYSASTPTDARDLLQGSINYVNTIVNADVFRKIQRAVDLAKGIG FT TDKYSMELLKARNNQKVKIERLRYASSIADAAGVKKPVYSNGSAISDDPDFPITMGSDA FT LNRKLEIEKSVIDLASINTELLNRKLYLDKLNRLEIPNVNIVPFKYLQQPTEPTKRDVP FT KRALIVILFALVGLMGSVGFVLVEHFVRERKREEEGLKLSQTKE" FT gene 193219..194523 FT /gene="gsk" FT /locus_tag="YP516_1075" FT CDS 193219..194523 FT /codon_start=1 FT /transl_table=11 FT /gene="gsk" FT /locus_tag="YP516_1075" FT /product="inosine-guanosine kinase" FT /EC_number="2.7.1.73" FT /note="GO_function: GO:0008906 - inosine kinase activity" FT /db_xref="InterPro:IPR011611" FT /db_xref="UniProtKB/TrEMBL:Q1CL04" FT /protein_id="EEO77410.1" FT /translation="MKFPGKRKSKHYFPVNARDPLLQSVQAENEVSTSYIVGIDQTLVD FT IEAKVDEDFITRYGLSQGHSLVIEDDVAERLYQELTHNDLITHEFAGGTIGNTLHNYSV FT LADDRSVLLGTMCSNIKIGSYAYRYLCNTSSRTDLNYLQAVDGAIGRCFTLITENGERT FT FAISPGQMNQLRPESIPEEVIAGASALVLTAYLVRCKPGEPMPDATMQAIHYAKKHDVP FT VVMTLGTKYVIADNPQWWREFLNEHVSILAMNEDEAYELTGLNDPLMASDMALEWVDLV FT LCTAGPSGLYMAGYTEEAYKRQTQHPLLPGAIAEFNLYEFSRAMRKAHCVDPFRIYSHI FT APYMGGPEKIMNTNGAGDGALSAVLHDITANGYHRNNVPNSSKHVRSYLSYSSLAQVCK FT YANRVSYQVLNQHSPRLTRGLPEREDSLEESYWER" FT gene complement(194620..196311) FT /gene="ybaL" FT /locus_tag="YP516_1076" FT /note="similar to rosB" FT CDS complement(194620..196311) FT /codon_start=1 FT /transl_table=11 FT /gene="ybaL" FT /locus_tag="YP516_1076" FT /product="predicted transporter with NAD(P)-binding FT Rossmann-fold domain" FT /note="GO_component: GO:0016021 - integral to membrane; FT GO_function: GO:0008324 - cation transmembrane transporter FT activity; GO_function: GO:0005488 - binding; GO_function: FT GO:0003824 - catalytic activity; GO_function: GO:0015299 - FT solute:hydrogen antiporter activity; GO_process: GO:0006812 FT - cation transport; GO_process: GO:0008152 - metabolic FT process; GO_process: GO:0006885 - regulation of pH; FT GO_process: GO:0006813 - potassium ion transport" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q1CL03" FT /protein_id="EEO77411.1" FT /translation="MHHSTPLITTIVGGLVLAFLFGTLAHRLRISPLVGYLAAGVLAGP FT FTPGFVADTSLAPELAEIGVILLMFGVGLHFSLKDLLAVKSIAIPGAIAQIAVATLLGM FT GLSHFLGWDLITGLVFGLCLSTASTVVLLRALEERQLIDSQRGQIAIGWLIVEDLAMVL FT TLVLLPAFAGVMGNETTNLNQLFTELAITIGKVIAFITLMIVVGRRLVPWILAKTASTG FT SRELFTLAVLVLALGIAYGAVELFDVSFALGAFFAGMVLNESELSHRAAQDTLPLRDAF FT AVLFFVSVGMLFDPMILVNEPLAVIASLAIIIFGKSAIAFALVRLFGHSKRTALTISVS FT LAQIGEFAFILAGLGISLGLLSGHGRNLVLASAILSIMLNPLLFTLLDRYLAKTETMED FT LILEEAVEEEKQIPVDLCNHVLLVGYGRVGSLLGAKLHAEGIPLVVIENSRPRVEALRE FT QGINAVFGNAANADVMALGRLDCARWLLLTIPNGYEAGEIVASARIKRPDLEIIARAHY FT DDEVVYISDRGANQVVMGEREIANSMLNMLKIETLTEEDKMPVCPI" FT gene complement(196546..197760) FT /gene="rosA" FT /locus_tag="YP516_1077" FT /note="similar to fsr" FT CDS complement(196546..197760) FT /codon_start=1 FT /transl_table=11 FT /gene="rosA" FT /locus_tag="YP516_1077" FT /product="putative membrane efflux protein" FT /note="GO_component: GO:0016021 - integral to membrane; FT GO_function: GO:0005215 - transporter activity; GO_process: FT GO:0006810 - transport" FT /db_xref="InterPro:IPR011701" FT /db_xref="UniProtKB/TrEMBL:Q1CL02" FT /protein_id="EEO77412.1" FT /translation="MTDRSDTGCQQPVNVSVKRTSFSILGAISVSHLLNDMIQSLILAI FT YPLLQAEFSLSFAQIGLITLTYQLTASLLQPLIGLYTDKHPQPYSLPIGMGFTLSGILL FT LAVATTFPVVLLAAALVGTGSSVFHPESSRVARMASGGRHGLAQSVFQVGGNFGSALGP FT LLAAIIIAPYGKGNVGWFSLAALLAIVVLLQVSKWYKLQQRASYGKVLKISSAKTLPKN FT KIISTLAILMVLIFSKYFYLTSISSYYTFYLIHKFGVSVQSAQIHLFVFLFAVAAGTII FT GGPLGDKIGRKYVIWGSILGVAPFTLALPYASLYWTGILTVFIGVILASAFSAILVYAQ FT ELIPGKVGMVSGLFFGFAFGMGGIGAAVLGYVADLTSIELVYQICAFLPLLGIFTALLP FT NLDDK" FT gene 198112..199080 FT /locus_tag="YP516_1078" FT CDS 198112..199080 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1078" FT /product="UDP-sugar hydrolase; 5'-nucleotidase" FT /EC_number="3.6.1.45" FT /EC_number="3.1.3.5" FT /note="overlaps CDS with the same product name; FT GO_function: GO:0016788 - hydrolase activity, acting on FT ester bonds; GO_function: GO:0016787 - hydrolase activity; FT GO_function: GO:0008253 - 5'-nucleotidase activity; FT GO_process: GO:0009166 - nucleotide catabolic process" FT /db_xref="InterPro:IPR006179" FT /db_xref="UniProtKB/TrEMBL:Q1CL00" FT /protein_id="EEO77413.1" FT /translation="MPGKKIKLTTSPYCTPMIIMVTSGKTSKVSMVLLHRKPWWMKFVN FT KWPQKEEAYCYSRAVIINTGVPESDLQDAEPDFRGMNLVGYDAMAIGNHEFDNPLSVLR FT QQEKWAKFPLLSANIYQKGTQQRLFKPYALFDKQGIKIAVLGLTTDDTPKVSSPENVVD FT IEFRVPAVEAKHVVEQLRKTEKPDIIIAATHMGHYDDGKHGSNAPGDVEMARSLPAGYL FT DMIVGGHSQNPVCMASENHRQVDYVPGSPCVPDRQNGTWIVQAHEWGKYVGRADFTFRN FT GELTLVNYQLIPINLKKKLRKLMALASTSFIPKRLLRTPQC" FT gene 199074..199697 FT /locus_tag="YP516_1079" FT CDS 199074..199697 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1079" FT /product="UDP-sugar hydrolase; 5'-nucleotidase" FT /EC_number="3.6.1.45" FT /EC_number="3.1.3.5" FT /note="overlaps CDS with the same product name; FT GO_function: GO:0016787 - hydrolase activity; GO_function: FT GO:0008253 - 5'-nucleotidase activity; GO_process: FT GO:0009166 - nucleotide catabolic process" FT /db_xref="InterPro:IPR008334" FT /db_xref="UniProtKB/TrEMBL:Q1CKZ9" FT /protein_id="EEO77414.1" FT /translation="MLKLLTPFEERGKAQLGVRIGSVNGRLEGDRNKVRFEQTNMARLL FT LASQIERSGADFAVMSGGGVRDSIGAGDITYKDVLKVQPFGNTLVYVDMKGSEVEKYLA FT VVANKQPDSGAYAQFANVSLVADGQGVSNVKIQGEPLDPNKTYRMATLNFNALGGDGYP FT RIDNSPSYVNTGFIDAEVLKQYIEKHSPLDAEQYQLKGEIVYNQ" FT gene complement(199801..200040) FT /locus_tag="YP516_1080" FT CDS complement(199801..200040) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1080" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q1CKZ8" FT /protein_id="EEO77415.1" FT /translation="MGYDAHKNDLNIKADLIALKYVVQTLVAVANSAHDNRLNQALDIL FT IHEFESNANKNNDNQSIANAIANYLPDEPVIELV" FT gene complement(200377..200856) FT /gene="ybaK" FT /locus_tag="YP516_1081" FT CDS complement(200377..200856) FT /codon_start=1 FT /transl_table=11 FT /gene="ybaK" FT /locus_tag="YP516_1081" FT /product="bifunctional cys-tRNA Pro deacetylase/cys-tRNA FT Cys deacylase" FT /note="GO_process: GO:0006355 - regulation of FT transcription, DNA-dependent" FT /db_xref="UniProtKB/TrEMBL:C4GQS5" FT /protein_id="EEO77416.1" FT /translation="MTPAVVLLEKQKVPFTLHPYHHDAAETHFGDEAVKKLGLNADQVY FT KTLLVALNNDAKNLAVAVTPVATQLDLKKVARALGAKKAEMADPQLAQRTTGYLIGGIS FT PLGQKKRLPTVIDSQAQEFVTIFVSGGKRGLDIELAAVDLCRLLQGVFADIAKRD" FT gene 201038..201121 FT /gene="sroB" FT /locus_tag="YP516_1082" FT ncRNA 201038..201121 FT /gene="sroB" FT /locus_tag="YP516_1082" FT /product="small RNA" FT /ncRNA_class="other" FT gene complement(201120..201929) FT /gene="ybaP" FT /locus_tag="YP516_1083" FT CDS complement(201120..201929) FT /codon_start=1 FT /transl_table=11 FT /gene="ybaP" FT /locus_tag="YP516_1083" FT /product="conserved protein" FT /db_xref="InterPro:IPR010891" FT /db_xref="UniProtKB/TrEMBL:Q1CKZ6" FT /protein_id="EEO77417.1" FT /translation="MDKLLRRIAKFLGIITPTTYAYPALDITLPGERHLHLVGSIHMGT FT AGMFPLPHTLLNKLNQADALIVEADITDATSSFGHSTVTEPLVDRLSEEYYPQLQRRCE FT ELGSDPLAMTYLPAWQVALMLQAHQAQRLGLRGEYGIDYQLLKAAGAQEKEIIELEGAE FT MQLDLLKTLPDNGISLLHDTLLHWHTNARLLQTMIGWWLEHQPEKYQATLAPTFSHDMY FT DVLMLQRNKRWQQQLEQLAPGRYVVAVGALHLYGEGNLPELLRADNQ" FT gene complement(202450..205335) FT /locus_tag="YP516_1084" FT /note="similar to ybaR" FT CDS complement(202450..205335) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1084" FT /product="putative cation-transporting ATPase" FT /EC_number="3.6.3.3" FT /EC_number="3.6.3.4" FT /note="GO_component: GO:0016021 - integral to membrane; FT GO_component: GO:0016020 - membrane; GO_function: FT GO:0015662 - ATPase activity, coupled to transmembrane FT movement of ions, phosphorylative mechanism; GO_function: FT GO:0046873 - metal ion transmembrane transporter activity; FT GO_function: GO:0046872 - metal ion binding; GO_function: FT GO:0005524 - ATP binding; GO_function: GO:0004008 - FT copper-exporting ATPase activity; GO_function: GO:0042626 - FT ATPase activity, coupled to transmembrane movement of FT substances; GO_function: GO:0016787 - hydrolase activity; FT GO_function: GO:0003824 - catalytic activity; GO_function: FT GO:0016820 - hydrolase activity, acting on acid anhydrides, FT catalyzing transmembrane movement of substances; FT GO_process: GO:0006810 - transport; GO_process: GO:0030001 FT - metal ion transport; GO_process: GO:0008152 - metabolic FT process; GO_process: GO:0006825 - copper ion transport; FT GO_process: GO:0015992 - proton transport" FT /db_xref="InterPro:IPR018303" FT /db_xref="UniProtKB/TrEMBL:Q1CKZ5" FT /protein_id="EEO77418.1" FT /translation="MLQTTLLALQGLSCMNCAQRVKAALESREDVHHAEVNVHYAKVTG FT EADTHALIETIKQTGYQATEAQTPDVELHLSGLSCGHCTETVRKALEAVSGVISADVTL FT ESANVYGKADIQTLIAAVEQAGYHATQQGIDSPKTEPLTHSAQSQPESLAAAPNTVPAT FT NVALATSTVSDTNTVLPTNTALPTNTTSTTSTADTASATSTAPVINPLPVTESVAQPAA FT SEGESVQLLLTGMSCASCVSKVQNALQRVDGVQVARVNLAERSALVTGTQNNEALIAAV FT KNAGYGAEIIEDEGERRERQQQMSQASMKRFQWQAALGLLLGIPLMAWGLFGGSMTLTP FT ETQTPWLIIGIITLLVMIFAGGHFYRNAWVSLKNGSATMDTLVALGTGAAWIYSITVNI FT WPDVFPMEARHLYYEASAMIIGLINLGHAMEQRARQRSSNALERLLDLAPPTAKLVTDD FT GEKVIPLADVQLGMILRLTTGDRVPVDGEIVQGEVWMDEAMLTGEPIPQQKSVGDIVHA FT GTQVQDGTVQFRASAIGSQTTLARIIKLVRQAQSSKPEIGKLADRISAVFVPTVVVIAI FT VAGLIWYFFGPQPQLVYTLVVATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDA FT DALQQASNLDTLVFDKTGTLTEGHPQVVAIHTFNGVSEQQALGWAAALETGSNHPLARA FT ILQRAEGLTLATASQFRTLRGLGVSGEVDGIPLLLGNNRLLEEQQIDTRELQSLIQQQA FT ESGATPVILTANGKPAALLSIRDPLREDSIGALQRLHQLGYSLVMLTGDNPITANAIAK FT EAGIDRVIAGVLPDGKADAIKQLQAAGHKVAMIGDGINDAPALAQADVGIAMGGGSDIA FT IETAAITLMRHSLYGVVDAVELSKATLRNMKQNLLGAFFYNALGIPIAAGILYPFTGTL FT LSPVVAGAAMALSSITVVSNANRLLRFKPKQ" FT gene 205542..205961 FT /gene="cueR" FT /locus_tag="YP516_1085" FT CDS 205542..205961 FT /codon_start=1 FT /transl_table=11 FT /gene="cueR" FT /locus_tag="YP516_1085" FT /product="copper responsive transcription regulator" FT /note="GO_component: GO:0005622 - intracellular; FT GO_function: GO:0016563 - transcription activator activity; FT GO_function: GO:0005507 - copper ion binding; GO_function: FT GO:0003677 - DNA binding; GO_function: GO:0000166 - FT nucleotide binding; GO_function: GO:0003700 - transcription FT factor activity; GO_process: GO:0045941 - positive FT regulation of transcription; GO_process: GO:0006355 - FT regulation of transcription, DNA-dependent" FT /db_xref="InterPro:IPR015358" FT /db_xref="UniProtKB/TrEMBL:Q1CKZ4" FT /protein_id="EEO77419.1" FT /translation="MNISDVAKKTGLTSKAIRFYEEKKLVTPPVRTDNGYRSYTAKHIE FT ELTLLRQARQVGFTLDECRELLALFHNPARHSADVKAATLLKVAEIEQHINDLNQMRMR FT LLALAEECPGDEGADCPIINSLAGCCHSSSSLPLK" FT gene complement(206070..206519) FT /gene="ybbJ" FT /locus_tag="YP516_1086" FT CDS complement(206070..206519) FT /codon_start=1 FT /transl_table=11 FT /gene="ybbJ" FT /locus_tag="YP516_1086" FT /product="conserved inner membrane protein" FT /db_xref="InterPro:IPR002810" FT /db_xref="UniProtKB/TrEMBL:Q1CKZ3" FT /protein_id="EEO77420.1" FT /translation="MLEEIAVNPNWFWLSLGGLLLAAEMLGASGYLLWSGIAAVLVGVL FT VWLFPFSWEMQGVLFSILTVVSAFLWWYWLSKRTKPQPAMLNQRNHQLLGIRATLTEPT FT VDGYGRMKVGDSSWRIYCATELNPGTEVEVILVEGNTLHVRAVNR" FT gene complement(206522..207436) FT /locus_tag="YP516_1087" FT /note="similar to ybbK" FT CDS complement(206522..207436) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1087" FT /product="predicted protease, membrane anchored" FT /note="GO_component: GO:0016020 - membrane" FT /db_xref="InterPro:IPR018080" FT /db_xref="UniProtKB/TrEMBL:Q1CKZ2" FT /protein_id="EEO77421.1" FT /translation="MFTVIPILIVVALIVVLSAIKIVPQGFQWTVERFGRYTKTLMPGL FT NIVVPFMDRVGRKINVMEQVLDIPSQEIISRDNANVAIDAVCFIQVIDPVKAAYEVSNL FT ELAIVNLTMTNFRTVLGSMELDEMLSQRDNINSRLLHIVDEATNPWGIKITRIEIRDVR FT PPTELISAMNAQMKAERTKRADILEAEGVRQAAILRAEGEKQSQILKAEGERQSAFLQA FT EARERAAEAEAQATKMVSEAIAAGDIQAINYFVAQKYTDALQHIGSANNSKVIMMPLEA FT SSLMGAIGGIAELIGESKNSRGK" FT gene complement(207491..207598) FT /locus_tag="YP516_1088" FT CDS complement(207491..207598) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1088" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C4GQT1" FT /protein_id="EEO77422.1" FT /translation="MYHHLLLRGAILRSFMLLSRHFSSLHAFTGLSLGI" FT gene complement(207631..208500) FT /gene="ybbN" FT /locus_tag="YP516_1089" FT CDS complement(207631..208500) FT /codon_start=1 FT /transl_table=11 FT /gene="ybbN" FT /locus_tag="YP516_1089" FT /product="predicted thioredoxin domain-containing protein" FT /db_xref="InterPro:IPR017936" FT /db_xref="UniProtKB/TrEMBL:Q1CKZ1" FT /protein_id="EEO77423.1" FT /translation="MLTPTTIEITEANLHQAIEQSMSVPVLFYFWSERSQHCLQLTPTL FT DKLAAEYAGQFILARVDCDAQPMVASQFGLRSIPAVYLFKDGQPVDGFQGPQPEEVIRE FT LLQRVLPKPEELKSAEAAQLMSEGKVPEALPLLKEAWQLAQQSNSPQTSEIALQLAEAQ FT ILLNRSEDAESVLATLPLQDRDTRYQGLIAQIELLKQAANTPEIQQLQQQLAEQPDNVE FT LAVQLALQLHQVGRNEEALELLLGHLKKDLAAANGTARKTLMDILAALGTGDALAAKYR FT RQLYALLY" FT gene complement(208577..209353) FT /gene="ybbO" FT /locus_tag="YP516_1090" FT CDS complement(208577..209353) FT /codon_start=1 FT /transl_table=11 FT /gene="ybbO" FT /locus_tag="YP516_1090" FT /product="predicted oxidoreductase with NAD(P)-binding FT Rossmann-fold domain" FT /EC_number="1.-.-.-" FT /note="GO_function: GO:0016491 - oxidoreductase activity; FT GO_function: GO:0005488 - binding; GO_function: GO:0003824 FT - catalytic activity; GO_process: GO:0008152 - metabolic FT process" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q1CKZ0" FT /protein_id="EEO77424.1" FT /translation="MQKAVLITGCSSGIGLVAAQDLKNRGYRVLAACRKPDDVAKMVQL FT GLEGIELDLDDSASVERAAAQVIELTGGRLYGLFNNGGFGLYGSLHTISRQQLEKQFST FT NLFGTHQLTQLLLPAMLPHGEGRIIQTSSVMGLVSTAGRGAYAASKYALEAWSDALRME FT LQSSGIHVSLIEPGPISTHFTQNVNQAEADKPVNNPGIAKRFTLPPEAILPKLRHALES FT PRPQLRYPVTMVAHALTLLRRLLPGRMLDRVLRGNS" FT gene complement(209740..210408) FT /locus_tag="YP516_1091" FT CDS complement(209740..210408) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1091" FT /product="Arylesterase precursor" FT /EC_number="3.1.1.2" FT /note="GO_function: GO:0016298 - lipase activity; FT GO_function: GO:0016787 - hydrolase activity; GO_function: FT GO:0016788 - hydrolase activity, acting on ester bonds; FT GO_process: GO:0006629 - lipid metabolic process" FT /db_xref="UniProtKB/TrEMBL:C4GQT4" FT /protein_id="EEO77425.1" FT /translation="MLTLTDVLIKMMNFKNVFRWHLPFLLLLGLFSLRAAATDTLLILG FT DSLSAGYRLPIAQAWPSLLDKKWQATPSLPKVVNASISGDTAAQGLARLPALLKQHQPR FT WVLIELGANDALRGFPTQDIQRDLSEIINQITAAKAQPLLMQIRIPPNYGRRYTDAFTA FT IYPQLAQQFDIPLLPFFMEQVAVKPEWMQDDGLHPNGDAQPFIADWMAQQLKPLVVDPK FT " FT gene 210346..211032 FT /gene="ybbA" FT /locus_tag="YP516_1092" FT CDS 210346..211032 FT /codon_start=1 FT /transl_table=11 FT /gene="ybbA" FT /locus_tag="YP516_1092" FT /product="predicted transporter subunit: ATP-binding FT component of ABC superfamily" FT /note="GO_function: GO:0017111 - nucleoside-triphosphatase FT activity; GO_function: GO:0000166 - nucleotide binding; FT GO_function: GO:0016887 - ATPase activity; GO_function: FT GO:0005524 - ATP binding" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:Q1CKY8" FT /protein_id="EEO77426.1" FT /translation="MPAENVLEVHHLNKHVGQGEQQLSILTGVELVVKPAQTIALIGES FT GSGKSTLLGILAGLDDGSSGDVSLLGQSLTTMDEEGRALLRAKNVGFVFQSFMLVPTLN FT TLENVQLPALLRGESDRQSKSQAIELLEQLGLGKRLYHLPAQLSGGEQQRVALARAFSG FT RPKILFADEPTGNLDRQTGDRIADLLFSLNRDFATTLILVTHDEQLAGRCQRRLRLRDG FT KLWEES" FT gene 211029..213458 FT /gene="ybbP" FT /locus_tag="YP516_1093" FT CDS 211029..213458 FT /codon_start=1 FT /transl_table=11 FT /gene="ybbP" FT /locus_tag="YP516_1093" FT /product="predicted inner membrane protein" FT /note="GO_component: GO:0016020 - membrane" FT /db_xref="InterPro:IPR003838" FT /db_xref="UniProtKB/TrEMBL:Q1CKY7" FT /protein_id="EEO77427.1" FT /translation="MIWRWFWREWRAPSLLIVWLALTLAVACVLALGTISDRMEKGLSQ FT QSRDFLAGDRVLRAAHPVPEAWLQEAKQQGLAVSRQLSFLTMTFAGDRPQLAEVKATDL FT AYPLYGKLETLPKGAELQPGTVLVAPRLLALLGVKVGDMLDVGDTSLKIIGEIIQEPDA FT GFNPFQTAPHILINLADVEKTGAVQPGSRLTYRYMFAGTPEAVTQFSDWLTPQLAPEQR FT WYGLQESGGALGKSLQRAQQFLLLSALLTLLLSIAAVAVAMGHYCRSRYDLVAVLKTLG FT AGRGALRRLIIGQWLSVLALAGLCGSVIGLLFERLLVWLLAPVLPAELPTAGLWPWVWS FT MGSLVLISLLVGVRPYRQLLATQPLRVLRRDVAANVWPLRYFIPVMLLVVIGLLALLMG FT GNSLLWAILGGMVVLALLLGGIGWGSLLLLRHLTVTRLSLRLAINRLLRQPWMTLTQLA FT AFSLSFMLLALLLVLRGDLLERWQQQLPPDSPNYFLLNMTPQQVPQVTAFLAQHHIQPS FT TFYPIVRVRLTEINQQLATERVSEDSPGGEAVNRELNLTWQQDLPAHNVLTAGQWPPKA FT DEVSMEQGIADRLGIKIGDKLTFSGDTQSFGATVSSIRQVDWDSLRPNFYFIFPPGALD FT QQPQTWLTSFRYHGDGEALVQLNRQFPTLSLLDIGAMLKQVGQVLQQVSRALEVMVVLV FT ILCGTLLLLAQVQVGMRQRRQELVVYRTLGASKRLLRGTLWWEFALLGLVAGLAAAIGA FT EAALWALQRLVFDFPWQPNWMMWWILPLAGASLLSVCGGWLGVRLLRGQALFRRYE" FT repeat_region 213499..214208 FT /mobile_element="insertion sequence:IS1541A" FT /note="IS1541A.20" FT gene 213593..214102 FT /locus_tag="YP516_1095" FT CDS 213593..214102 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1095" FT /product="transposase" FT /note="GO_function: GO:0004803 - transposase activity; FT GO_function: GO:0003677 - DNA binding; GO_process: FT GO:0006313 - transposition, DNA-mediated" FT /db_xref="UniProtKB/TrEMBL:C4GNE8" FT /protein_id="EEO77428.1" FT /translation="MRSGNCKCSTRNQKGVPMRDEKSLAHTRWNCKYHIVFAPKYRRQV FT FYREKRRAIGSILRKLCEWKNVNILEAECCVDHIHMLLEIPPKMSVSGFMGYLKGKSSL FT MLYEQFGDLKFKYRNREFWCRGYYVDTVGKNTARIQEYIKHQLEEDKMGEQLSIPYPGS FT PFTGRK" FT gene complement(214212..215276) FT /locus_tag="YP516_1096" FT CDS complement(214212..215276) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1096" FT /product="Phosphoribosylaminoimidazole carboxylase FT ATPasesubunit" FT /EC_number="4.1.1.21" FT /note="GO_component: GO:0009320 - FT phosphoribosylaminoimidazole carboxylase complex; FT GO_function: GO:0004638 - phosphoribosylaminoimidazole FT carboxylase activity; GO_function: GO:0005524 - ATP FT binding; GO_function: GO:0003824 - catalytic activity; FT GO_process: GO:0006189 - 'de novo' IMP biosynthetic FT process" FT /db_xref="InterPro:IPR013817" FT /db_xref="UniProtKB/TrEMBL:Q1CKY5" FT /protein_id="EEO77429.1" FT /translation="MKPVCVLGNGQLGRMLRQAGEPLGIAVYPVGLDAEPEAVPYQHSV FT ITAEIERWPETALTRELATHTAFVNRDIFPRLADRLPQKQLLDSLGLATAPWQLLSSAS FT EWPEVFATLGELAIVKRRVGGYDGRGQWRLRPGEQGTLPPDAYGECIVEQGINFSGEVS FT LIGARSHQGESVFYPLTHNLHEDGILRMSVALPQPNSKLQQQAEKMLSAIMDKLNYVGV FT MAMECFIVGDRLLINELAPRVHNSGHWTQNGASISQFELHLRAILDLPLPQPVVNTPSA FT MVNLIGTPVNIQWLSLPLVHLHWYDKEVREGRKVGHLNLNDPEGTALSASLAALAPLLP FT AEYQNALRWAQDKL" FT gene complement(215273..215797) FT /gene="purE" FT /locus_tag="YP516_1097" FT CDS complement(215273..215797) FT /codon_start=1 FT /transl_table=11 FT /gene="purE" FT /locus_tag="YP516_1097" FT /product="N5-carboxyaminoimidazole ribonucleotide mutase" FT /EC_number="4.1.1.21" FT /note="GO_component: GO:0009320 - FT phosphoribosylaminoimidazole carboxylase complex; FT GO_function: GO:0004638 - phosphoribosylaminoimidazole FT carboxylase activity; GO_process: GO:0006189 - 'de novo' FT IMP biosynthetic process" FT /db_xref="InterPro:IPR000031" FT /db_xref="UniProtKB/TrEMBL:Q1CKY4" FT /protein_id="EEO77430.1" FT /translation="MGANLNSAYAAGVKIAIVMGSKSDWATMQFAADVLTTLNVPFHVE FT VVSAHRTPDRLFSFAEQAEANGLHVIIAGAGGAAHLPGMLAAKTLVPVLGVPVQSAALS FT GVDSLYSIVQMPRGIPVGTLAIGKAGAANAALLAAQILALHDTELAGRLAHWRQSQTDD FT VLDNPDPREEA" FT gene complement(216093..216815) FT /gene="lpxH" FT /locus_tag="YP516_1098" FT CDS complement(216093..216815) FT /codon_start=1 FT /transl_table=11 FT /gene="lpxH" FT /locus_tag="YP516_1098" FT /product="UDP-2,3-diacylglucosamine pyrophosphatase" FT /note="GO_component: GO:0005737 - cytoplasm; GO_function: FT GO:0016787 - hydrolase activity; GO_function: GO:0016462 - FT pyrophosphatase activity; GO_process: GO:0009245 - lipid A FT biosynthetic process" FT /db_xref="InterPro:IPR010138" FT /db_xref="UniProtKB/Swiss-Prot:Q1CKY3" FT /protein_id="EEO77431.1" FT /translation="MSTLFIADLHLSVQEPAITAGFLHFIQREAIHADALYILGDLFES FT WIGDDDPEPLYRQVAAALKSLQQQGVPCYFIHGNRDFLLGKRFAEESGMVLLPEENVVE FT LYGRKILILHGDTLCTDDTDYQHFRKKVHNPLIQKLFLWIPLRLRLRIAAYMRNKSQQN FT NSGKSERIMDVNSKAVIDAFLRHDVSWMIHGHTHRPAIHSVELPMVTAHRVVLGAWHVE FT GSMVKVTADNVELITFPF" FT gene complement(216826..217320) FT /gene="ppiB" FT /locus_tag="YP516_1099" FT CDS complement(216826..217320) FT /codon_start=1 FT /transl_table=11 FT /gene="ppiB" FT /locus_tag="YP516_1099" FT /product="peptidyl-prolyl cis-trans isomerase B (rotamase FT B)" FT /EC_number="5.2.1.8" FT /note="GO_function: GO:0003755 - peptidyl-prolyl cis-trans FT isomerase activity; GO_process: GO:0006457 - protein FT folding" FT /db_xref="InterPro:IPR002130" FT /db_xref="UniProtKB/TrEMBL:Q1CKY2" FT /protein_id="EEO77432.1" FT /translation="MVTFHTNHGDIVINTFADKAPATVENFLNYCRKGFYDNTIFHRVI FT DGFMIQGGGFEPGMSQKTTDAPIKNEANNGLKNTRGTLAMARTNDPHSATAQFFINVAD FT NDFLNFRSERPDGWGYCVFAEVTDGLDVVDKIKNVATGRSGMHQDVPKEDVIIKSVTIS FT E" FT gene 217531..218916 FT /gene="cysS" FT /locus_tag="YP516_1100" FT CDS 217531..218916 FT /codon_start=1 FT /transl_table=11 FT /gene="cysS" FT /locus_tag="YP516_1100" FT /product="cysteinyl-tRNA synthetase" FT /EC_number="6.1.1.16" FT /note="GO_component: GO:0005737 - cytoplasm; GO_function: FT GO:0005524 - ATP binding; GO_function: GO:0004817 - FT cysteine-tRNA ligase activity; GO_function: GO:0000166 - FT nucleotide binding; GO_function: GO:0004812 - FT aminoacyl-tRNA ligase activity; GO_process: GO:0006423 - FT cysteinyl-tRNA aminoacylation; GO_process: GO:0006412 - FT translation; GO_process: GO:0006418 - tRNA aminoacylation FT for protein translation" FT /db_xref="InterPro:IPR001412" FT /db_xref="UniProtKB/Swiss-Prot:Q1CKY1" FT /protein_id="EEO77433.1" FT /translation="MLKIFNTLSRQKEEFKPIHAGKVGMYVCGITIYDLCHIGHGRTFV FT AFDVVARYLRYLGYSLTYVRNVTDVDDKIIKRAIENNETCEQLTTRMLAEMHKDFDALN FT LERPDLEPRATHHIAEIIEMTERLIARGHAYVASNGDVMFAVDSDPDYGVLSRQDLDQL FT QAGARVEVADVKRNPMDFVLWKMSKPGEPRWESPWGPGRPGWHIECSAMNGKQLGAHFD FT IHGGGSDLMFPHHENEIAQSTCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVL FT AYYDAETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDANATPAGGAEFEA FT RFRTAMDDDFNTPEAYSVLFDIAREVNRLKNEDMAAANGLAAELRKLAQVLGLLEQDPE FT LFLQGGAQADDDEVAKIEALIKQRNDARSSKNWALADAARDQLNELGIVLEDGPQGTTW FT RRK" FT repeat_region 219118..219827 FT /mobile_element="insertion sequence:IS1541A" FT /note="IS1541A.21" FT gene 219212..219721 FT /locus_tag="YP516_1102" FT CDS 219212..219721 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1102" FT /product="transposase" FT /note="GO_function: GO:0004803 - transposase activity; FT GO_function: GO:0003677 - DNA binding; GO_process: FT GO:0006313 - transposition, DNA-mediated" FT /db_xref="UniProtKB/TrEMBL:C4GNE8" FT /protein_id="EEO77434.1" FT /translation="MRSGNCKCSTRNQKGVPMRDEKSLAHTRWNCKYHIVFAPKYRRQV FT FYREKRRAIGSILRKLCEWKNVNILEAECCVDHIHMLLEIPPKMSVSGFMGYLKGKSSL FT MLYEQFGDLKFKYRNREFWCRGYYVDTVGKNTARIQEYIKHQLEEDKMGEQLSIPYPGS FT PFTGRK" FT gene complement(219868..220080) FT /gene="ybcJ" FT /locus_tag="YP516_1103" FT CDS complement(219868..220080) FT /codon_start=1 FT /transl_table=11 FT /gene="ybcJ" FT /locus_tag="YP516_1103" FT /product="predicted RNA-binding protein" FT /note="GO_function: GO:0003723 - RNA binding" FT /db_xref="InterPro:IPR002942" FT /db_xref="UniProtKB/TrEMBL:Q1CKX9" FT /protein_id="EEO77435.1" FT /translation="MDIFHLEKHPHVELCDLLKLQGWNDSGASAKAAIADGLVKVDGKV FT ETRKRCKILADQIVEFQGMKVQVKA" FT gene complement(220095..220961) FT /gene="folD" FT /locus_tag="YP516_1104" FT /note="similar to ads" FT CDS complement(220095..220961) FT /codon_start=1 FT /transl_table=11 FT /gene="folD" FT /locus_tag="YP516_1104" FT /product="bifunctional 5,10-methylene-tetrahydrofolate FT dehydrogenase/5,10-methylene-tetrahydrofolate FT cyclohydrolase" FT /EC_number="3.5.4.9" FT /EC_number="1.5.1.5" FT /note="GO_function: GO:0003824 - catalytic activity; FT GO_function: GO:0005488 - binding; GO_function: GO:0004488 FT - methylenetetrahydrofolate dehydrogenase (NADP+) activity; FT GO_function: GO:0004477 - methenyltetrahydrofolate FT cyclohydrolase activity; GO_process: GO:0009396 - folic FT acid and derivative biosynthetic process; GO_process: FT GO:0008152 - metabolic process" FT /db_xref="InterPro:IPR000672" FT /db_xref="UniProtKB/Swiss-Prot:Q1CKX8" FT /protein_id="EEO77436.1" FT /translation="MSAKIIDGKTIAQQVRNEVAAVVQQRLAAGKRAPGLAVVLVGENP FT ASQIYVASKRKACEEVGFVSRSYDLPMATSEAELLALIDSLNEDTEIDGILIQLPLPNG FT IDNVKVLERIHPDKDVDGFHPYNVGRLCQRAPKLRACTPRGIMTLLERYDIPTYGLNAV FT VVGASNIVGRPMSLELLLAGCTTTVTHRFTKNLRHHIENADLLVVAVGKPGFIPGEWIK FT PGAIVIDVGINRLESGKVVGDVAFDVAAERAGWITPVPGGVGPMTVATLIQNTLQACEE FT YHDISQN" FT gene 221176..221252 FT /locus_tag="YP516_1105" FT tRNA 221176..221252 FT /locus_tag="YP516_1105" FT /product="tRNA-Arg" FT /note="GO_component: GO:0005829 - cytosol; GO_function: FT GO:0030533 - triplet codon-amino acid adaptor activity; FT GO_process: GO:0006414 - translational elongation" FT gene complement(221316..221498) FT /locus_tag="YP516_1106" FT CDS complement(221316..221498) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1106" FT /product="putative regulatory protein" FT /db_xref="UniProtKB/TrEMBL:C4GQU6" FT /protein_id="EEO77437.1" FT /translation="MATRYIKWPEMLLLVGKSRPTIWRMYSKRNEFPKPERTKSGMFLG FT WPEASYEEWVQSKKC" FT gene complement(221757..221957) FT /locus_tag="YP516_1107" FT CDS complement(221757..221957) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1107" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C4GQU7" FT /protein_id="EEO77438.1" FT /translation="MESLPDEYVDVASQITYTAKSDEIKSASENTAEAKAIAGGKDISE FT VFINPVPGARIETGPRSLQVR" FT gene complement(222071..222568) FT /locus_tag="YP516_1108" FT CDS complement(222071..222568) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1108" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q1CKX7" FT /protein_id="EEO77439.1" FT /translation="MAHLHIKERLSGEHIASYVLTFDLTPPLDLGQRLPQVESAYVSQE FT YQGGGVSTATYKAIIDHYGAVISDTYQTEGGMVLWLFGLSKDDSIQLTILNVDGHTLDY FT KINEHGERISFQADRKSLLEIADTVWGNPDNVELSNLETLGFTPSWRNHSNHVLAATKS FT II" FT gene complement(222606..222719) FT /locus_tag="YP516_1109" FT CDS complement(222606..222719) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1109" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q1CKX6" FT /protein_id="EEO77440.1" FT /translation="MSPNLIAEHDKILKWPEVNDLAYGHFLWLPEFKTPEW" FT gene complement(222704..223042) FT /locus_tag="YP516_1110" FT CDS complement(222704..223042) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1110" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C4GQV0" FT /protein_id="EEO77441.1" FT /translation="MITHSPHTIASRTECIGCFTVPGVLGGFEVRSMKNRKERPLLMVV FT RTGWEKAAAYEQIRPVSEIVIEKNGQSRPVNQAFFWNDLQDTSIDFSQKAVDLFFSKKG FT TLSACHPI" FT gene complement(223261..223377) FT /locus_tag="YP516_1111" FT CDS complement(223261..223377) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1111" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C4GQV1" FT /protein_id="EEO77442.1" FT /translation="MPVITGPERQSQKMGVCSSKRKHVTQREKISRSEESAR" FT gene 223761..223994 FT /locus_tag="YP516_1112" FT CDS 223761..223994 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1112" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C4GQV2" FT /protein_id="EEO77443.1" FT /translation="MRKYDRTGAEKTSLIAYFGMKPLRELHPEPKDKINTTTQFLFYPD FT EKPWEAVNPRILRGVITSVQPCERSADMNHCN" FT gene 224221..224823 FT /locus_tag="YP516_1113" FT CDS 224221..224823 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1113" FT /product="putative CDP-alcohol phosphatidyltransferase" FT /EC_number="2.7.8.5" FT /note="GO_component: GO:0016020 - membrane; GO_function: FT GO:0016780 - phosphotransferase activity, for other FT substituted phosphate groups; GO_function: GO:0008444 - FT CDP-diacylglycerol-glycerol-3-phosphate FT 3-phosphatidyltransferase activity; GO_process: GO:0008654 FT - phospholipid biosynthetic process" FT /db_xref="InterPro:IPR000462" FT /db_xref="UniProtKB/TrEMBL:Q1CKX4" FT /protein_id="EEO77444.1" FT /translation="MTLYDIKPQFQNLLRPLVVRLHARGVTANQITLLAMLTSVLLGGW FT LICFPQPVLFISLPVFLFFRMALNAIDGMLAREFNQQSTLGAILNEVGDIISDAALYLA FT FAFLSGVSPWLVILVVLLSWLTEFCGVIAQTLTGIRNYRGPLGKSDRAFVLGALGLFIA FT LWPQYIGVTNIVFGVTALLLVWTCINRCRSAIEVKNA" FT gene 224816..225745 FT /locus_tag="YP516_1114" FT /note="similar to ynbB" FT CDS 224816..225745 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1114" FT /product="putative phosphatidate cytidylyltransferase" FT /EC_number="2.7.7.41" FT /note="GO_component: GO:0016020 - membrane; GO_function: FT GO:0004605 - phosphatidate cytidylyltransferase activity; FT GO_process: GO:0008654 - phospholipid biosynthetic process" FT /db_xref="InterPro:IPR000374" FT /db_xref="UniProtKB/TrEMBL:Q1CKX3" FT /protein_id="EEO77445.1" FT /translation="MPDSLQTLYYCLGGIFSVLLLATIIIFVLKKCRPQRDWLELQQRI FT NSWWVIICLFSLAMLSPKWLALTFFGFISFLSLKEYLTLAPTRRSDSVPLLWMYAAIPL FT QYVWIGMSWYGMFIIFIPIYVFLFLPARMVLVGDTKGFLHSASIMHWGMMATVFALSHV FT AYLLTLPGVDAKAGALLVIFLVVATELNDISQYLWGKSLGKIKVTPKVSPNKTLAGLLG FT GVLTTMLLAAIFGPLLTPMDWLHSLGAGVIIGLSGFCGDVVMSAIKRDFGVKDSGKLLP FT GHGGILDRLDSLIYTAPLFFHFYHYFYV" FT gene 225755..226387 FT /locus_tag="YP516_1115" FT CDS 225755..226387 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1115" FT /product="putative acyltransferase" FT /EC_number="2.3.1.51" FT /note="GO_function: GO:0008415 - acyltransferase activity; FT GO_function: GO:0003841 - 1-acylglycerol-3-phosphate FT O-acyltransferase activity; GO_process: GO:0008152 - FT metabolic process" FT /db_xref="InterPro:IPR002123" FT /db_xref="UniProtKB/TrEMBL:Q1CKX2" FT /protein_id="EEO77446.1" FT /translation="MNRMLRWIFTLCIAYPVVWIWLGVRVAGRKKLPRDGPAIIVANHN FT SHLDVLTLFTLFPLSTLVKVQPVAAADYFLKNKVISWFALKVIGIIPVYRGAHQANPLQ FT ACVDALAEKKIVIIFPEGTRGEPGKFSEIKSGIWHLSQRCPEVPIIPVYMHGLDRSMGK FT GQKIPVPFFIDIFIDDPLFYDAEKVTFKQLLLNRFVALQQLATRKTS" FT gene 226384..228147 FT /locus_tag="YP516_1116" FT CDS 226384..228147 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1116" FT /product="Methyltransferase" FT /db_xref="InterPro:IPR000073" FT /db_xref="UniProtKB/TrEMBL:Q1CKX1" FT /protein_id="EEO77447.1" FT /translation="MSQEVRLFQEGMFTASDETSLYFRHWSATEGNSKKVIVLFHRGHE FT HSGRLQHIVDELMMPDTHFYAWDARGHGQSPGARGYSPSLARSVLDVDEFVRFVAQDAQ FT VNLDDIVVIAQSVGAVLVSTWVHDYAPKIRGMVLASPAFKVKLYVPFARLGLGLMQRIR FT GLFYVNSYVKGKFLSHDPERIASFEQDKLITRQIAVNILLDLYKTAERIVSDSTAITLP FT TQLLISGDDFVVHEKPQKQFYAGLRSAIKEQHILPGFYHDTLGEKDRSIAFDKMKNFID FT RLYATAPYAFDYSHEDRWSPSADAYRELQAPPKSRSLEGMFYAALSFGMKTIGRQSKGM FT RLGYETGFDSGSTLDYVYRNQPEGNGILGRMIDHNYLNSVGWRGIRVRKVNIQQMIEQA FT VAKIQLSHMPVRVVDIAAGHGRYVLDALEKQQGIESILLRDYSDLNVEKGQAMIEERGL FT SHVAQFRKGNAFDYDSLATLDPAPTLGIVSGLYELFPDNDLIKTSLAGLAAAIPPGGML FT VYTGQPWHPQLKTIAYTLTSHQNGIPWMMRVRSQKEMDTLVEQAGFEKCHQVIDEFGIF FT TVSLAVRKQHG" FT gene 228140..229459 FT /locus_tag="YP516_1117" FT /note="similar to ynbD" FT CDS 228140..229459 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1117" FT /product="putative dual specificity phosphatase" FT /note="GO_component: GO:0016020 - membrane; GO_function: FT GO:0003824 - catalytic activity; GO_function: GO:0005391 - FT sodium:potassium-exchanging ATPase activity; GO_function: FT GO:0016791 - phosphoric monoester hydrolase activity; FT GO_function: GO:0004725 - protein tyrosine phosphatase FT activity; GO_function: GO:0008138 - protein FT tyrosine/serine/threonine phosphatase activity; GO_process: FT GO:0006814 - sodium ion transport; GO_process: GO:0006813 - FT potassium ion transport; GO_process: GO:0016311 - FT dephosphorylation; GO_process: GO:0006470 - protein amino FT acid dephosphorylation" FT /db_xref="InterPro:IPR000387" FT /db_xref="UniProtKB/TrEMBL:Q1CKX0" FT /protein_id="EEO77448.1" FT /translation="MVESALTQNKYSLWKQGVCWLLLLGPLFFLSYGQVNQFTATRYDV FT GSRVFAWEHAIPFMPWTIVPYWSIDLLYGISLFICTSKQELTRHGCRLLASSLIACAGF FT LLFPLKFTFVRPETQDMFGWLFHQLELFDLPYNQAPSLHIILTWLLWLRFRQHLNRGAR FT MVSGAWFLLIAASVLTTWQHHFVDVLSGFIVAVVISYAIPIEGQWRWKRPSPHALRLAA FT KYTLGGIIFLLAGVLIPGSYFLLWPAGALLMVSAGYVGLGTSLFQKNEHGHLSLSARLL FT LWPYLTGARLSKMWFSRHIPKTSAILDGVSLGCFPDKSLQQTAVLDLTAEFHHRTRVPG FT VWYAYPLMDLVVPDVQDIAQAVAKLTELRQGHLTVVVCCALGLSRSATVVAAWLLAQGH FT VSCVQEAIDLIKSQRPQVVLTPAYIHALEQFQGTLCQISL" FT gene 229471..229842 FT /locus_tag="YP516_1118" FT CDS 229471..229842 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1118" FT /product="putative membrane protein" FT /db_xref="UniProtKB/TrEMBL:C4GQV8" FT /protein_id="EEO77449.1" FT /translation="MKIHLSSWRYFALLTLPPLVLAFNLLYSFASLVLLMLFLVTHYYC FT WRLWLDERLFTLLNKESSLAEFDEGMAQLWIAKSGATRTLTERWCGVRGLFYRAMFSLI FT ALWLTSLSSVLYLTLTLVD" FT gene 229939..230244 FT /locus_tag="YP516_1119" FT CDS 229939..230244 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1119" FT /product="putative membrane protein" FT /db_xref="UniProtKB/TrEMBL:Q1CKW8" FT /protein_id="EEO77450.1" FT /translation="MDHINNAKRVLDENAKVLYGIFGVISCSGYFPPLPFLNEFFMAGS FT DPCDQDERMDSWCPFTLTSSEYEEVKAWWLVSRPGTVESALGSECWDDWIQEILEL" FT repeat_region complement(230545..232498) FT /mobile_element="insertion sequence:IS100kyp" FT /note="IS100kyp.6" FT gene complement(230611..231393) FT /locus_tag="YP516_1120" FT CDS complement(230611..231393) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1120" FT /product="transposase" FT /note="GO_function: GO:0005524 - ATP binding; GO_function: FT GO:0017111 - nucleoside-triphosphatase activity; FT GO_function: GO:0000166 - nucleotide binding" FT /db_xref="UniProtKB/TrEMBL:C4GNY9" FT /protein_id="EEO77451.1" FT /translation="MMMELQHQRLMALAGQLQLESLISAAPALSQQAVDQEWSYMDFLE FT HLLHEEKLARHQRKQAMYTRMAAFPAVKTFEEYDFTFATGAPQKQLQSLRSLSFIERNE FT NIVLLGPSGVGKTHLAIAMGYEAVRAGIKVRFTTAADLLLQLSTAQRQGRYKTTLQRGV FT MAPRLLIIDEIGYLPFSQEEAKLFFQVIAKRYEKSAMILTSNLPFGQWDQTFAGDAALT FT SAMLDRILHHSHVVQIKGESYRLRQKRKAGVIAEANPE" FT gene complement(231390..232412) FT /locus_tag="YP516_1121" FT CDS complement(231390..232412) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1121" FT /product="transposase" FT /note="GO_function: GO:0003677 - DNA binding; GO_function: FT GO:0000150 - recombinase activity; GO_function: GO:0003676 FT - nucleic acid binding; GO_process: GO:0015074 - DNA FT integration; GO_process: GO:0006310 - DNA recombination" FT /db_xref="InterPro:IPR017894" FT /db_xref="UniProtKB/TrEMBL:Q1CC61" FT /protein_id="EEO77452.1" FT /translation="MVTFETVMEIKILHKQGMSSRAIARELGISRNTVKRYLQAKSEPP FT KYTPRPAVASLLDEYRDYIRQRIADAHPYKIPATVIAREIRDQGYRGGMTILRAFIRSL FT SVPQEQEPAVRFETEPGRQMQVDWGTMRNGRSPLHVFVAVLGYSRMLYIEFTDNMRYDT FT LETCHRNAFRFFGGVPREVLYDNMKTVVLQRDAYQTGQHRFHPSLWQFGKEMGFSPRLC FT RPFRAQTKGKVERMVQYTRNSFYIPLMTRLRPMGITVDVETANRHGLRWLHDVANQRKH FT ETIQARPCDRWLEEQQSMLALPPEKKEYDVHLDENLVNFDKHPLHHPLSIYDSFCRGVA FT " FT gene 232506..233399 FT /gene="ptxR" FT /locus_tag="YP516_1122" FT CDS 232506..233399 FT /codon_start=1 FT /transl_table=11 FT /gene="ptxR" FT /locus_tag="YP516_1122" FT /product="putative LysR-family transcriptional regulatory FT protein" FT /note="GO_function: GO:0003700 - transcription factor FT activity; GO_process: GO:0006355 - regulation of FT transcription, DNA-dependent" FT /db_xref="InterPro:IPR005119" FT /db_xref="UniProtKB/TrEMBL:Q1CKW5" FT /protein_id="EEO77453.1" FT /translation="MLKENFNELQSFLVVARERSFTKAAGKLGVSQSALSHAIKGLEER FT LNLRLLTRTTRSVAPTEAGERIIACLEPRLADLEQELETLLQLNGTVSGNIRLSAGEHA FT ARSLLWPKLKPFLRKYPEINVELVVDNGFVNIVDGRFDAGVRLGESVDKDMIAVKIGPE FT MRMAVVGSPEYFMANAIPVTPHELQHHRCINMRLPTAGGLYHWEFEKEGKPLRVKVEGQ FT LTLNILPERIDAAQSGFGLACVPEDSIQAFLRSGKLIQVLEAWCPSFPGYYLYYPSRKQ FT HPPVFALMIDALRYSD" FT gene complement(233454..234443) FT /locus_tag="YP516_1123" FT CDS complement(233454..234443) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1123" FT /product="putative aldo/keto reductase" FT /note="GO_function: GO:0016491 - oxidoreductase activity" FT /db_xref="InterPro:IPR001395" FT /db_xref="UniProtKB/TrEMBL:Q1CKW4" FT /protein_id="EEO77454.1" FT /translation="MQKRYLGKSGLEVSALGLGCMGLSYGYGPATDTRQAVELIRAAVE FT RGVTFFDTAEVYGPYLNEEVVGEALKPFRDQVVIATKFGFTFGEDNKQQILNSRPEHIR FT EAVEGSLRRLKTDVIDLLYQHRVDPDVPIEDVAGTVKDLIAEGKVKHFGLSEAGAQTIR FT RAHAIQPVAALQSEYSMWWREPEQEILPLLEELGIGFVPFSPLGKGFLTGAIKAGATFG FT EDDFRSKVPRFAAEALEANERLVALLGILAAEKGVTSAQIALAWLLAQKPWIVPIPGTT FT KLHRLEENLGAADITLSQDDIWNITQALATVKIVGERYPAAMQARVGR" FT gene complement(234469..235320) FT /locus_tag="YP516_1124" FT CDS complement(234469..235320) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1124" FT /product="putative aldo/keto reductase" FT /EC_number="1.1.1.-" FT /note="GO_function: GO:0016491 - oxidoreductase activity" FT /db_xref="InterPro:IPR018170" FT /db_xref="UniProtKB/TrEMBL:Q1CKW3" FT /protein_id="EEO77455.1" FT /translation="MQTVKLNNGIAMPLLGFGVFQMTNTAECERAVIDAIETGYRLIDT FT AASYQNETQVGNALKLSGIARDELFITTKLWLQDTYYEGAKAQFERSLNRLQLDYVDLY FT LIHQPYGDVHGAWRAMEELHQAGKIRAIGVSNFHPDRLADLMAFNKIIPAVNQIEVNPF FT NQQLHAVPWMQSRGIQPEAWAPFAEGRNGLFQNPVLTAIGEKYGKSVGQVVLRWIFQRG FT IVSLAKSVRKGRMEENINILDFELSAEDMLQIAALDTATSAFFSHRDPAMVEWLTGRKL FT DV" FT gene 235493..235636 FT /locus_tag="YP516_1125" FT CDS 235493..235636 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1125" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q1CKW2" FT /protein_id="EEO77456.1" FT /translation="MIDEIPMADKNTPMTDQDIDTVYGVTIFTGGDRSYSTADNLYKRI FT KK" FT gene 235793..237421 FT /locus_tag="YP516_1126" FT CDS 235793..237421 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1126" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q1CKW1" FT /protein_id="EEO77457.1" FT /translation="MKTWIARLLGKDISIDFPAPWAADSTAIYRWLATWPDSDGPLPAE FT AETLPDEPSAIEGKIRWSAGALDGVFGHHVAEADDETPVEAIMAALRSVLHKPQQQDIE FT QLYRLLCHASPLNYLDVLLPAVAQDPQLPANKLQALAEWLATESPDRNAVKVAIALLGF FT FPTQKSCQILSTLGAHDEFTLYAAVALRSILPEDEYERAWLAMAKRAGGWGRVQLIERL FT PEFLSKQSRDWLLREGYRNAVMYEYTAWHCATHGQLLQAMQQLKTMQKQPDAPLLLGAA FT EILQALINGGPAQNMHDYAEGALACEYYLRCLQAAPPAEIQHYLAASEIARFAQEQNSE FT EEGVWDQAQCNNLVELANVVMALPEWSGIIANNLQGSDTYLFNLAVSASRLRQQDPWES FT IFARQLADAADNNWYQLMQTAQPEHIARVISLAEQQLDLEAIASGPGMAMGLGLEYQQH FT QALDFVLQDLKKFPGMGWSLLAVGLRSERIRDRSMALNALDVWPQDDWSPDMSQALADS FT LCHEPDEQMRERLHKLCVNLGITTG" FT gene complement(237500..239881) FT /gene="bglB" FT /locus_tag="YP516_1127" FT CDS complement(237500..239881) FT /codon_start=1 FT /transl_table=11 FT /gene="bglB" FT /locus_tag="YP516_1127" FT /product="putative beta-glucosidase" FT /EC_number="3.2.1.21" FT /note="GO_function: GO:0004553 - hydrolase activity, FT hydrolyzing O-glycosyl compounds; GO_process: GO:0005975 - FT carbohydrate metabolic process" FT /db_xref="InterPro:IPR019800" FT /db_xref="UniProtKB/TrEMBL:Q1CKW0" FT /protein_id="EEO77458.1" FT /translation="MNLNKTGFFTAFTFLSAPVWATPQLKEAESIPSVIAAMTLEEKAA FT FVSGTGMNNAEKVAGAAGSTLAIPRLGIPQIVFADGPVGVRLGAGPTGGEKRFATGFPV FT SVAMAATWDPAIIKRVGGAIGDEAKQYGVDLILGPAINIQRHPLNGRNFEYFTEDPLLN FT AIMTASYIDGMQTEGVGAVLKHFAANNQETRRQIVNEIISDRALHEIYFPGFEYAMEKA FT QPWAVMSSYPSINGTPSSQNPWLLKDVLRQQWKFDGFVMSDWYGVADPVSALKGGNDLN FT MPGGRTPDDSLFLTPNTDPKEVVLAALKSGELTQDQIDENIRNILNVVIKTHRFKNGDA FT AMMPEPVDHSALARQIAADSMVLLKNDAHTLPIKAAFRVAAFGQNIDNFFVTGGGSAEV FT NIDPKRLVTLPQGLKNAGIALIRQIGDQALDEPVNQPALTKAAQQSDIALISIGRSSTE FT GADRYSMAMHPDEVAMIKKVASAFHQQNKKVVVLLNIGSPIEMTSWEQYADAILLTWQP FT GEQAGNAVADILLGKVNPSGKLPLTFPKRLEDSPSFGNYPGNAKTVIYGEGIYVGYRYF FT DTKRIAPMYPFGYGLSYSTVNYGKISPEKPVFNIDTENSIEVSIPVRNTSGIDTKEVVQ FT LYVHDNASRLDRPEQELKAFEKVSLSAGEEKRVAFKLDKRAFSYYDEDKNNWVLEPGLF FT TLRIGRSSRDIHAETPLIVKSSTPAFSFDTPWIDIQTYEKAATIVARFIGDEQTNAWIY FT GNPTLGDKLEDALKLKPEFAKDEAKRQKLKQEILQEINSL" FT gene complement(240040..240570) FT /locus_tag="YP516_1128" FT CDS complement(240040..240570) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1128" FT /product="putative membrane protein" FT /note="overlaps CDS with the same product name" FT /db_xref="UniProtKB/TrEMBL:Q1CKV9" FT /protein_id="EEO77459.1" FT /translation="MLKRKWLSIAVIIVALIMVNISIYQKQHLLAKGDIIILELAPVDP FT RSLMQGDYMALSYALVAPFNEQFNAEQEKCREEPLLLCPESKRRLIVELDDRQRATAAR FT IDQGEPLADNQHYLQYRFKGRSIQIGTDAYFFQEGHAEDYVNARYGEFRVAKDGSALLT FT HLLDADLQRIENK" FT gene complement(240563..242770) FT /locus_tag="YP516_1129" FT CDS complement(240563..242770) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1129" FT /product="putative membrane protein" FT /note="overlaps CDS with the same product name" FT /db_xref="InterPro:IPR018677" FT /db_xref="UniProtKB/TrEMBL:Q1CKV8" FT /protein_id="EEO77460.1" FT /translation="MAEPKPASWMPSHAAAQLCRQLQSLLPMHLLAPAAFEQILRYCGV FT RPGRQAWRLFLSRTLLLAGSLAAICGVIFFFAWNWAAMPAMAKFGIIELLIVALAILIW FT WRWYDAVSRTALLAAGFLFGALFAVFGQIYQTGADSWELFRAWALILLPLALLSRQGGL FT WFLTWLVTNIGLNLFFFSYSSPFTVSFSLFDNIFYLNTLFTYGYLLFQGLCLLAWEVTQ FT RFSKTQSPDKTVNRWFPRLMAAYFLLSLTTPIISELTYFHFQQPGYVLLLCWVAVMAGG FT YWWYRYRQPDLCMLTLGVCSLLAVGTAAILTSAGWGWYRNVGSLFLIGILIALLLGAGG FT KLLLHWRRKMYPNQAVELSRSAYDELLVNLEQHSLLNADQKAVLLAEQGKLTLPWYIRT FT AFAFGGWIAALILLALLILLGFVSGMFDNLNAGTIIVVSLIGGAFAAFLLTRPGMGIQQ FT IGLVWAIASSIGLYSGIILIQDSSSRLMLMQSLWFIPVLAVLIVVFHNDMYRFLATGTL FT VFMSIVTTSYALIWHLAPDNQQLFFFIPILIVTVIVMLILWLICNEIKLLATVNAPLIH FT PLMYGGIGGILVVCLHSIQMGNIHEFYWMSDRGLYLEQSLSYGIPAAFLLFTLIQWVLH FT RSKLKPLWLIAAVVTSLAAYFAPGMGFGLALLLIARYQGNQWLLGVAASFLAVYTSGWY FT YFLGFSLLYKSLLLIGGGVLLLVLAGVLNRVLSAGEVNQHA" FT gene complement(242806..242967) FT /locus_tag="YP516_1130" FT CDS complement(242806..242967) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1130" FT /product="hypothetical protein" FT /note="no significant database match found" FT /db_xref="UniProtKB/TrEMBL:Q1CKV7" FT /protein_id="EEO77461.1" FT /translation="MHLSFILNAFTVYIERVHYLLLFIIYHFSSFIKKPEMTRHLAAVR FT AYRQQDGI" FT gene 243222..244430 FT /locus_tag="YP516_1131" FT CDS 243222..244430 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1131" FT /product="putative transposase" FT /note="GO_function: GO:0004803 - transposase activity; FT GO_function: GO:0003677 - DNA binding; GO_process: FT GO:0006313 - transposition, DNA-mediated" FT /db_xref="InterPro:IPR001207" FT /db_xref="UniProtKB/TrEMBL:Q1CC83" FT /protein_id="EEO77462.1" FT /translation="MDEKKLKALAAELAKGLKTEADLNAFSRMLTKLTVETALNAELTE FT HLGHEKNTPKSGSNTRNGYSSKTLLCDDGEIELNTPRDRENTFEPQLIKKNQTRITQMD FT SQILSLYAKGMTTREIVATFKEMYDADVSPTLISKVTDAVKEQVAEWQNRQLDALYPIV FT YMDCIVVKVRQNGSVINKAVFLALGINTEGQKELLGMWLAENEGAKFWLSVLTELKNRG FT LQDILIACVDGLKGFPDAINSVYPQTHIQLCIIHMVRNSLKYVSWKDYKAVTSGLKMVY FT QAPTEEAALMALDKFAEAWDDKYPQISKSWRTHWENLNTFFGYPPDIRKAIYTTNAIES FT VNSVIRAAIKKRKVFPTDDSVRKVVYLAIKDASKKWSMPIQNWRLAMSRFIIEFGDRLS FT DHL" FT gene 244509..244817 FT /locus_tag="YP516_1132" FT CDS 244509..244817 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1132" FT /product="putative cytoplasmic protein" FT /db_xref="InterPro:IPR013109" FT /db_xref="UniProtKB/TrEMBL:Q1CKV5" FT /protein_id="EEO77463.1" FT /translation="MTTPRHELDIAPAQPPYDQDEIVDALMEGAVLTRLGGLRVLRVGD FT NVFINSERLEMANAEAADALCRYTIIGKKELGEALQDSAFVTELTELINQGYWFFNE" FT gene complement(244832..245413) FT /locus_tag="YP516_1133" FT CDS complement(244832..245413) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1133" FT /product="Ynd" FT /db_xref="UniProtKB/TrEMBL:Q1CKV4" FT /protein_id="EEO77464.1" FT /translation="MLNTDARQQLRKLLPLEMVATKQWLLDQGLSLHFLDNAVRSSTLL FT PLTAGVYCLLEARVSWQGVVASLQRMSEQPIHVGGLTALELAGLGHYLSKGAEQHIHLW FT SEAALPTWLNRVPLNAKFKWHGTHRLWPKMTMDDPRFLNEETWREELPPVTFSCPEKAI FT FETLVDVPKAISFEHADELMQGLHNLSPII" FT gene complement(245707..245889) FT /locus_tag="YP516_1134" FT CDS complement(245707..245889) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1134" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C4GQX4" FT /protein_id="EEO77465.1" FT /translation="MNGEDRQRSKASAPRMARLEPTWMYLRRLYDLPVLSVVGTLSITS FT APLLRGYFFYFTLFY" FT gene complement(245948..247864) FT /locus_tag="YP516_1135" FT CDS complement(245948..247864) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1135" FT /product="putative pertactin family FT virulencefactor/autotransporter precursor" FT /note="GO_component: GO:0019867 - outer membrane; FT GO_process: GO:0007155 - cell adhesion" FT /db_xref="InterPro:IPR012332" FT /db_xref="UniProtKB/TrEMBL:Q1CKV3" FT /protein_id="EEO77466.1" FT /translation="MDKTLLAGAISLSLVILPVQVLAFTPNVVGITVNDEVVIHGIQNV FT RDGGVINNGLVSDNAAITVTNGSSAGTANNTTVGDKGWLQITGALATGTIVNQGGLLDT FT KTAGTVIDSQINDGGHMTLGLNSQSKGYLNIAAGAELFVTNNDPYISDVTTHNPALPAN FT VMIENLNVAGLVEIGPSWKGTSIVPLPLSDVLGPVLVTRINNVTLQGGDINLMAYSAGG FT QFNRLEIENLSGQGNFAMTTQLASNTGDFITVSQQATGQFGITVQDSGKEPQSADNLAL FT VHINRGDAQFRLLNTGGVVDLGVYQYGLYSQESNGSTDWYLATSTEELPGTTPNVTAPM FT LSSAAQGVLNMAAAPRHILNAELSTLRQRQGELKADAEGTVGVWARYLTDDSRLSDNKN FT IAFKNTLSGMEIGADKQLGLNRGNMLIGAFTSYSSSDVKSTHDANGDIRSYGGGLYLTY FT LDQSGFYVDTVLKANRFNNKMNTQETRGEYNQNALTTSVESGYQWPVYANLVLEPYGKV FT SYSRIGSADYTLSNGMVAEVAKADSVQGELGTVLAASYSINQMTIKPYIKLAITREFTK FT SNAVAINNIGFDNDFSGNVGKYGVGINATVANNTAIFAEVDYLNGSKIETPVTANIGFR FT LRF" FT gene 248673..248912 FT /locus_tag="YP516_1136" FT CDS 248673..248912 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1136" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q1CKV2" FT /protein_id="EEO77467.1" FT /translation="MEKEKKTLFGHKTPAMMQLSEQLESSLHNSPLVPEEKLALIMKLC FT VLLFRENKTDAAEMKVSDGRILKLTLEKTSSVLH" FT gene 248951..249202 FT /locus_tag="YP516_1137" FT CDS 248951..249202 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1137" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q1CKV1" FT /protein_id="EEO77468.1" FT /translation="MMKNNKNINKDEFSDKLSQQIKEMINNSQLDSVEILSVVMESIFS FT LFSETEGHLAEMKFIDSAGEDYRFILRLEVPPILERQH" FT gene 249226..249798 FT /locus_tag="YP516_1138" FT CDS 249226..249798 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1138" FT /product="putative membrane protein" FT /db_xref="InterPro:IPR017728" FT /db_xref="UniProtKB/TrEMBL:Q1CKV0" FT /protein_id="EEO77469.1" FT /translation="MSNLIYASVNGKKQGLISAGCSSLNSIGNRCQAGHEDQIQVLSLN FT HSISRQQNVAHHPVHFVKPIDKSSPLLGVAISENERINVVFYFYRVNSAGQLELYYEVK FT LTDASIVDITSVYPHSIDNNEMIPYEKIQLKYKSIAWDHKSAGTSGYSVWEDRVYSFLI FT SSTLFQVCLNIFIFFNWLVYQNYFWEK" FT gene complement(249810..250211) FT /locus_tag="YP516_1139" FT CDS complement(249810..250211) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1139" FT /product="putative membrane protein" FT /db_xref="InterPro:IPR010665" FT /db_xref="UniProtKB/TrEMBL:Q1CKU9" FT /protein_id="EEO77470.1" FT /translation="MVKINRPLFGAFAVFLLFLSCWVSWFSLNGYWDFFKLSDVIIFSW FT KVGVMIFGAPVLFYFSYLAFYCAIKNKPAKVNNKLANTFAMLAMLGVVISFFSSVYIGY FT SLTEYGYKLCSRSSWMSPNEYVKDIKLCP" FT gene complement(250444..250884) FT /locus_tag="YP516_1140" FT CDS complement(250444..250884) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1140" FT /product="putative membrane protein" FT /db_xref="InterPro:IPR010665" FT /db_xref="UniProtKB/TrEMBL:Q1CKU8" FT /protein_id="EEO77471.1" FT /translation="MLINSLTLGGDSAVVKINRPLVGAFAILLFFLSSWGCWFSLSGYL FT AFFKLSDVIIFSWKVGFVIFAVPLLFYFSYLAFFSAIKNKPAIMNNKLANALAILAILG FT SIISLFSSAYISYSLTEYSYKSCPRSSWMSPNKYVKDIKLCP" FT gene complement(250838..251041) FT /locus_tag="YP516_1141" FT CDS complement(250838..251041) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1141" FT /product="hypothetical protein" FT /note="no significant database match found" FT /db_xref="UniProtKB/TrEMBL:Q1CKU7" FT /protein_id="EEO77472.1" FT /translation="MVAGGSVLAIAIGIFTIGVLASLILYWLDNEYKISETIIKNIKSH FT RVQNSPYHADQFFNAWGRLSRG" FT gene complement(251113..251694) FT /locus_tag="YP516_1142" FT CDS complement(251113..251694) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1142" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q1CKU6" FT /protein_id="EEO77473.1" FT /translation="MKYNSVLKTFVDDDYRLEDHLDFKKQHADIRYQKLHKQLNEMSDE FT NMHALLTIEEGEYFLKTLCNPNPHQSWKDAIFSCTDPTSVFFGSLVESLSVSRIVFEIR FT GFGVTATEYVGKNGSSYIKLSGYAGIRKYLDATRYLIDNPKILDIGIGTQGIENGIVRG FT ARFCIVFSAAYRSVELLLKDEYGLADFLLI" FT gene 252310..252612 FT /locus_tag="YP516_1143" FT CDS 252310..252612 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1143" FT /product="putative regulator" FT /note="GO_function: GO:0003677 - DNA binding" FT /db_xref="UniProtKB/TrEMBL:C4GQY3" FT /protein_id="EEO77474.1" FT /translation="MFFRAWDNYPNTSDGGVNVMDKQDWHPADILAGLKKRGTTMAALS FT RKSGLASSTLANTLLRPWPKGERLIAEVLELHPAEIWPSRYLKPKKSPAESVNPG" FT gene complement(252599..252697) FT /locus_tag="YP516_1144" FT CDS complement(252599..252697) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1144" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C4GQY4" FT /protein_id="EEO77475.1" FT /translation="MKGIKKAPQVTPLWGSNLAFLLSFSINGISLD" FT gene complement(252825..255188) FT /locus_tag="YP516_1145" FT CDS complement(252825..255188) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1145" FT /product="Multimodular transpeptidase-transglycosylase" FT /EC_number="2.4.1.129" FT /note="GO_component: GO:0009274 - peptidoglycan-based cell FT wall; GO_function: GO:0008658 - penicillin binding; FT GO_function: GO:0003824 - catalytic activity; GO_function: FT GO:0008955 - peptidoglycan glycosyltransferase activity; FT GO_process: GO:0009273 - peptidoglycan-based cell wall FT biogenesis; GO_process: GO:0009252 - peptidoglycan FT biosynthetic process" FT /db_xref="InterPro:IPR011815" FT /db_xref="UniProtKB/TrEMBL:Q1CKU4" FT /protein_id="EEO77476.1" FT /translation="MRIPTLMATKRLLQNILMALFLLALLVIGFRLWPHPPLSQGLPLS FT TAYYDRHGTLLRLSLANDDRYRLWTPLEEISPLVIQGIQLHEDRGFYYHPGVNPISLLR FT GFWQSYVQGGRQQGGSTLTMQLARMHWHLNTRSPTGKLRQIARAIQLELSYSKHDILEA FT YLNYAPYGRNIESIAAASLIYFDKKPQQLTLPEALTLAVLPQSPSYRIDPTTGVLGSAL FT TQARNRLFVRWQQTYPTDSSQMALFQLPLSLRQPEKMPYIAPHFIEQIRRQNQQLANTQ FT SQVDTTLDANLQQLVEKQVEAFIRRNNSRGIHNAAVLLLDTRDMGVRALVGSANYYDRE FT IQGQVNGTNAKRSPGSTLKPFIYALGLEQGILHPMTILKDVPSSFGAYAPENFDHRFLG FT PVTATDALNFSRNIPAVYVASRLRQPTLYQFLRLSGVTNMASENHYGLSLVLGGGEITL FT QELARLYAMLANRGTLHPIQMVQTDKTLPSIRLLSEAASFITLDMLRQHRRPGDTLAQS FT PTSLPVYWKTGTSWGFRDAWSAGIFGPYVLIVWEGNFAGKGNSAFVGADAAAPLFFNII FT DSIQANYPALREPKHPWPPQLKRVAICLASGNLPTPWCQQQGKTWFIPGKSPIKVDTVY FT RPVVIDINSGQAACLPYDRSQTRTEVFEFWPSDLANVFAQAGLPKRQPPDRSHCKEGNT FT LASGNAPRITSPLRNTTYTLRQSQQGRDQIVFSATLDADSTTTYWFVDDIYLGSSTSKK FT SIDWHPTRSGQYRIRAIDDHGRADSRLIRVEKVD" FT repeat_region 255238..255947 FT /mobile_element="insertion sequence:IS1541A" FT /note="IS1541A.22" FT gene 255332..255841 FT /locus_tag="YP516_1147" FT CDS 255332..255841 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1147" FT /product="transposase" FT /note="GO_function: GO:0004803 - transposase activity; FT GO_function: GO:0003677 - DNA binding; GO_process: FT GO:0006313 - transposition, DNA-mediated" FT /db_xref="UniProtKB/TrEMBL:C4GNE8" FT /protein_id="EEO77477.1" FT /translation="MRSGNCKCSTRNQKGVPMRDEKSLAHTRWNCKYHIVFAPKYRRQV FT FYREKRRAIGSILRKLCEWKNVNILEAECCVDHIHMLLEIPPKMSVSGFMGYLKGKSSL FT MLYEQFGDLKFKYRNREFWCRGYYVDTVGKNTARIQEYIKHQLEEDKMGEQLSIPYPGS FT PFTGRK" FT gene complement(255956..261934) FT /locus_tag="YP516_1148" FT CDS complement(255956..261934) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1148" FT /product="putative membrane protein" FT /note="GO_function: GO:0004866 - endopeptidase inhibitor FT activity" FT /db_xref="InterPro:IPR011625" FT /db_xref="UniProtKB/TrEMBL:Q1CKU2" FT /protein_id="EEO77478.1" FT /translation="MDLLRFLLISPFALIKGLYRLSAYLLRLVGRLLRPVVGNLNWRAP FT QWMTKTANGLHCAFNRSEQWVAKHPKGISAAIVLLMAAASAAFYGYHWYLNRPQPIEPA FT PMVYQETSIRVSAPRTVNYQAQKPEAQPLSLNFMHSAAPITAMGQVVDQGISLTPAIEG FT EWKWATERTLVFTPKKAWPMGANYQITIDTEKLLAPQIKLNQTELNFTTPAFAYQLEKA FT EYYQDPQEAQKRSTIFHVQFNAPVDVASFEKQILLGLVEGKSKSEKKLNFSVVYDEKKL FT NAWIHSQPLMPMDKGGSVHLSINKGVNASVAATPTTQAQNKWVSVPNLYSLAVNSINAT FT LVESDNNNGERALIIAISDAVKDKEIKNAVKAWLLPQHNFQAKESAKTSTDFYPWDMDD FT IDDNLLQQSTPLALTLNEAEQEYQPIFSFKFDAPSYRTLLIEVNNSLTSVGGYKMPEKI FT YQIVRVPDYPKTLRFMSQGSLLSMQGDKQISVAARNMTGMKLDIKRVIPSQLQHIVSFK FT SSEYSSAHFNRLSDEYFTEHFQYQTALNNDNPGEINYQGVDLSRYLANNPSARRGVFLL FT TLSAWDPEKRDNQQHSEEDYDEDQEWVGDSRFVVITDLGIITKQSQDRSRDVFVQSIHS FT GLPAADAKVSVVAKNGVVLLSQITDSKGHVHFPALDAFKNERQPVMFLVEKEGDVSFLP FT TRATYDRNLDFSRFDIDGEETPSDPRTLSSYLFSDRGVYRPGDRFNIGLITRTANWATA FT LDGVPLRAEIRDPRDTLMSTLPITLDSSGFNELSYTTGENSPTGEWNVYLYLVGKNNET FT SMLLGHTTVNVKEFEPDRLKVQLQLTPERQQGWVKPQELQANINVQNLFGTPAQERRVT FT SRLILRPMYPSFAPFPDYLFYENRHNSDGFETELEEQTTDLQGMATIPLDLKSYADATY FT QLQLLSEAFEAGGGRSVAATARVLVSPYDSLVGVKADGDLSYINRDAVRKLNIIAVDPS FT LNKIALPDLSLSLIEQKYISVLTKQDSGVYKYQSRLKEQLVSEQPLQISPTGTDFTLVT FT QQPGDFILVVKDSQGQVLNRISYTVAGNANLTRSLDRNTELKLKLNQAEYLQGEEIEIA FT INAPYAGSGLITIEKDKVYSWQWFHSDTTSSVQRIRIPPAMEGNGYINVQFVRDVNSDE FT IFMSPLSYGVMPFKISTKARQAAIELASPSVIKPGEVLPIKVTTDSPQRVVVFAVDEGI FT LQVARYRLKDPLDYFFRKRELSVQSAQILDLILPEFSKLMALTSAPGGDAGEGLDLHLN FT PFKRKQDKPVAYWSGITEVNGETTFNYPIPDYFNGKIRVMAISATPDRIGKVQTSTTVR FT DNFILTPNVPAMVAPGDEFDVTVGVSNNLQGLKGKAVDITVRLTPPPQLEVVGEAQHSL FT SLAEKRETLVSFRLRARSALGDAPLVFDASYGSQSSRRTVSTSVRPAMPFRTQSVMGRM FT EGNKHTVTNLRQMFDNYAQRQATASHSPLVLTQGLARYLADYPYYSSEQIVSRSIPLIM FT QSKHPEMDSALNQNEVRDQLKNMLRILSSRQNSTGAIGLWHASPTPDPFVTPYVVQFLL FT EAKSAGYSLPNDILEGANNALRLLAARPYDDLYSLRLRAFAVYLLTLQGEITTNTLASV FT QSTLQQLYPDSWQTDLSAIYLASSYRLLKMDDEANKLLQPTWKQLGKAYSKAWWTQNYF FT DPLVQDATRLYLITRHFPEKVSSIPPQALENMVLALRDEHYTTYSSAMSILALESYTSQ FT VAAQQDTPETLQIIEISKSKGIDPNVISTLNGLFVQGDFTGEAKAIQFNNYASAPAWYV FT VNQSGYDLQPPKDAISNGLEISRSYTDEQGKPVTQVTLGQKVNVHLKIRANAKQGQNNL FT AIVDLLPGGFEVVQQTAPEPEFYDNQDDQDEETGSGWQSPLMVSGSSWYPDYSDIREDR FT VIIYGSASTDVKEFIYQIKSTNTGRFVVPPAYGEAMYDRNVQALSVGKGHILVVPPEAK FT " FT gene complement(262341..262895) FT /locus_tag="YP516_1149" FT CDS complement(262341..262895) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1149" FT /product="putative membrane protein" FT /db_xref="InterPro:IPR009898" FT /db_xref="UniProtKB/TrEMBL:Q1CKU1" FT /protein_id="EEO77479.1" FT /translation="MAMSEKRVNLQVIAWATIIGGFVSSLVKSGTEVNMPPRVVGEISP FT PAANIDAWLGWLGINSHSMDYVYQGVTISGAVVLYHWLFSFVFAFVYVLLSAYWPKVRL FT WYSAAYGLSITVAIHGVLIPALGFRHPAYLAGETGWLWNLNGYELWSEIIGHLCWSASL FT EICLVAVLAFFSKPIKGIWAN" FT gene 263027..263134 FT /locus_tag="YP516_1150" FT CDS 263027..263134 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1150" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C4GQY9" FT /protein_id="EEO77480.1" FT /translation="MVIALKSARDKDHDNNAWGFLAYSHQGNHFLTLFF" FT gene complement(263523..264377) FT /locus_tag="YP516_1151" FT CDS complement(263523..264377) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1151" FT /product="Predicted transcriptional regulator of FT themyo-inositol catabolism operon" FT /note="GO_function: GO:0005529 - sugar binding; FT GO_function: GO:0003700 - transcription factor activity; FT GO_process: GO:0006355 - regulation of transcription, FT DNA-dependent; GO_process: GO:0005975 - carbohydrate FT metabolic process" FT /db_xref="InterPro:IPR001347" FT /db_xref="UniProtKB/TrEMBL:Q1CKT9" FT /protein_id="EEO77481.1" FT /translation="MTTASNLSELQQQIRDRYDNLSKRLQQVSRYVLDNTNSVAFDTVA FT VIAERADVPPSTLIRFANAFDFSGFNEMKQLFRMNLVEETASYTDRARLFRAMESEAVP FT ETPLGILQEFARSNAQALQQLAARTEPEMLQRAVELLAQADTIYVVGLRRSFSVAAYLT FT YALSHLECRPVQLHGLGGMLREQVNSIKARDIVVSISFSPYAEETVMVSEIAASAGARQ FT IVITDSQISPLATFSDLCFVVKEAQVDAFRSQSATLCLVQSLVVALAYQQEAQAGAALA FT HRQ" FT gene 264715..266241 FT /locus_tag="YP516_1152" FT CDS 264715..266241 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1152" FT /product="putative aldehyde dehydrogenase" FT /EC_number="1.2.1.27" FT /note="GO_function: GO:0016491 - oxidoreductase activity; FT GO_function: GO:0004491 - methylmalonate-semialdehyde FT dehydrogenase (acylating) activity; GO_process: GO:0008152 FT - metabolic process" FT /db_xref="InterPro:IPR016162" FT /db_xref="UniProtKB/TrEMBL:Q1CKT8" FT /protein_id="EEO77482.1" FT /translation="METVANFINGKCVFSCGNSVTSGSPRAQAIFNSATGEPIRQVMMS FT TAQETEQAITAAQQAFASWSRQAPLKRARVMFRFKSLLEQHLDALAQLISEEHGKVYSD FT AVGELTRGLEVVEFACGIPHLQKGEHSANVGTGVDNHSLMQPLGVCVGITPFNFPAMVP FT MWMFPIALATGNTFVLKPSEKDPSLAVRLAQLLTEAGLPDGVFNVVQGDKTAVDVLLTD FT PRVQAVSFVGSTPIAEYIYQTASAHGKRCQALGGAKNHCILMPDADMDMAASAIMGAAY FT GAAGERCMALSVVLAVGDETADNLCARLEQQISTLRVGPGLAQEPENDMGPLISAPHRA FT KVLGYIDSGVAQKATLRIDGRGLKVAGHEQGYFVGPTLFDHVTPAMTIYQEEIFGPVLS FT VVRIADYRSAVDLINRHEYGNGTAIFTRDGGTARRFCEEVQVGMVGVNVPIPVPVAFHS FT FGGWKRSIFGPLNVHGNDGVRFYTRMKTITARWPEAQHDQGAAFSMPTLG" FT gene 266255..268201 FT /locus_tag="YP516_1153" FT CDS 266255..268201 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1153" FT /product="putative thiamine pyrophosphate-dependent FT protein" FT /note="GO_function: GO:0016740 - transferase activity; FT GO_function: GO:0003824 - catalytic activity; GO_function: FT GO:0000287 - magnesium ion binding; GO_function: GO:0030976 FT - thiamin pyrophosphate binding" FT /db_xref="InterPro:IPR012001" FT /db_xref="UniProtKB/TrEMBL:Q1CKT7" FT /protein_id="EEO77483.1" FT /translation="MSTVNMAMKTVRMTMAQALVRFLNQQYVAIDGQEVAFVHGVMTIF FT GHGNVLGIGQALEENPGHLQVHQGCNEQGMAHMAIGFAKQYRRQRIYAVSSSIGPGAAN FT MVTAAATATANRIPLLLLPGDIYASRQPDPVLQQIEQYHDLSISTNDCFRPVSRYWDRI FT NRPEQLMSAMLSAMRVLTDPADTGAVTLCLPQDVQGEAWDYPASFFERRVHRIERRPPD FT TRRLSDALSLIARKRRPLVVCGGGVRYSGAHEAFRAFVENAQLPFTETQAGKGALPSDH FT PLNLGGIGVTGGLAANRLAPQADLVIGIGTRLTDFTTGSKALFSHPEVAFLLLNVAEFD FT ALKLDATALIADARVGLEALTEGLAGYRTAWQGDIIEAKAAWCDECQRLWSRTWRPDEV FT PEVAGHLDDSLQEYAEVLNTTLTQTRVLGLINQHIEDDAIVVGAAGSLPGDLQRLWQVK FT TADTYHLEYGYSCMGYEIAAAIGAKIAMPHQPVYAMVGDGSYMMLHSELHTAVQEGLKI FT TVLLFDNAGFGCINNLQMGHGMGSFCTESRHRNHESGQLNGPLICVDFAQNAESYGCRA FT WRVHDEPSLLAALAASRDHPGPVLLDIKVLPKSMTHDYASWWRTGDAQIARSPAVQQAA FT ERTQMKVKRARQY" FT gene 268495..269004 FT /locus_tag="YP516_1154" FT CDS 268495..269004 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1154" FT /product="Myo-inositol 2-dehydrogenase" FT /EC_number="1.1.1.18" FT /note="overlaps CDS with the same product name; FT GO_function: GO:0005488 - binding; GO_function: GO:0003824 FT - catalytic activity; GO_function: GO:0016491 - FT oxidoreductase activity; GO_function: GO:0050112 - inositol FT 2-dehydrogenase activity; GO_process: GO:0008152 - FT metabolic process" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q1CKT6" FT /protein_id="EEO77484.1" FT /translation="MFNIALLGAGRIGQVHAANIAAHPETTLWSVVDPNQENAARLVSQ FT YRTRQQSVNEAMADLNVHAVLIASATDTHADLIELAAKHGKTIFCEKPVHLDLARVRDC FT LKVVKEYGVPLFIGFNRRFDPQFRHLKNEVLAGRIGKPESLLIISRDPSPPRWSMCAFP FT AVCSVI" FT gene 268971..269480 FT /locus_tag="YP516_1155" FT CDS 268971..269480 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1155" FT /product="Myo-inositol 2-dehydrogenase" FT /EC_number="1.1.1.18" FT /note="overlaps CDS with the same product name; FT GO_function: GO:0016491 - oxidoreductase activity; FT GO_function: GO:0050112 - inositol 2-dehydrogenase FT activity; GO_process: GO:0008152 - metabolic process; FT GO_process: GO:0006118 - electron transport" FT /db_xref="InterPro:IPR004104" FT /db_xref="UniProtKB/TrEMBL:Q1CKT5" FT /protein_id="EEO77485.1" FT /translation="MRVSGGMFRDMTIHDFDMARFIMGEEPVAVFAQGSNLVDPAIGAA FT GDIDTAFVVLKYASGAMATIVNSRRSAYGYDQRLELHGSQGLLCVGNILENQVQHFGQK FT GGTRALPEHFFLQRYQAAYAAEWEHFVAVLRGDVQPECGGEEGERALYLADKALESLHS FT QREISL" FT gene 269606..270535 FT /locus_tag="YP516_1156" FT CDS 269606..270535 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1156" FT /product="putative sugar-binding periplasmic protein" FT /db_xref="InterPro:IPR001761" FT /db_xref="UniProtKB/TrEMBL:Q1CKT4" FT /protein_id="EEO77486.1" FT /translation="MKKLILAALIVFTSGVAFAENEQIVFSTPNLAMPFEVHMQRTAVK FT TAKALGVKLQVLDGQGSSPKQVADLENAITRGAQGFIVSPNDINAISSAVEEIQQAKLP FT VVTLDRSVESEKKVPHFGANNYKGGEAIANYVKSMFPNGAEIVLLTGQPGSSSNIERTK FT GIRDSLKTGGDKYRIVVDQTGNWMRSEGMRIIESVLPSLPKPPQVILSANDDMALGAIE FT ALQSHGMKPGEIMVTGFDAVPEALARVREGWMAVTADQRPGYAVTTAMNQLVANIRDQK FT AITGADFLPTMITKENLDQAERVSEAGK" FT gene 270584..272131 FT /locus_tag="YP516_1157" FT CDS 270584..272131 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1157" FT /product="sugar transport ATP-binding protein" FT /note="GO_function: GO:0016887 - ATPase activity; FT GO_function: GO:0005524 - ATP binding; GO_function: FT GO:0017111 - nucleoside-triphosphatase activity; FT GO_function: GO:0000166 - nucleotide binding" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:Q1CKT3" FT /protein_id="EEO77487.1" FT /translation="MSQPLLKITDMAKSFSGVWALSNVQLTLEQGEIHALLGENGAGKS FT TLLKALSGAQPQTHGEIWFNGEMLALDDSPVERQNKGIITIYQEVNLLPNMTVAENMFL FT GREPRRRQVFVDEKAVNQEAQAILDYLQLNVSPTTAVARLSIAQQQMVEIARALTLNAK FT LIVMDEPSAALSDSEVESLHRVVRELKGRGVSIIYVTHRLHEVFQLCDRFTVFQDGRYT FT GSDEVAGTNVEKIIRLMVGRDVVFNRRPASETHHQDQPIRLSVQGLCREKPPLDPHGVA FT LKDISFHVHAGEVLGIAGLVGAGRTEVARCLFGAGAFTSGNFEIDGVPYQPRDPMFALE FT QGIALVPEDRKKEGAVQGLSIRDNLTLSSLAGLLQWRFFVNTRKEDQLIETYRLALQIK FT MVNSEQAVRKLSGGNQQKVILARCMALNPRILIVDEPTRGIDVGTKSEVHQVLFDMAKQ FT GVAVIVISSDLPEVLAVSDRIITLSEGRVTGEIHGDDASEERLMTMMTINHNALNAA" FT gene 272143..273171 FT /locus_tag="YP516_1158" FT CDS 272143..273171 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1158" FT /product="sugar transport system permease protein" FT /note="GO_component: GO:0016020 - membrane; GO_function: FT GO:0005215 - transporter activity; GO_process: GO:0006810 - FT transport" FT /db_xref="InterPro:IPR001851" FT /db_xref="UniProtKB/TrEMBL:Q1CKT2" FT /protein_id="EEO77488.1" FT /translation="MLQPLSKPQASVKSAMRFDPITFFERFGVLIFMFLLLIFFQLQNS FT NFLSERNIFNILTEVSIYGIMAVGMTFVILTAGIDLSVGSILAVSAMTAAYVIKGDNFT FT TIDPNAWGGMSWLIGLSICLAMGTLIGFLQGLGVTRLRLPPFIVTLGGMTIWRGLTLVI FT NDGAPIAGFDAGYRWWGRGDLLGISIPIWIFAIVAIAGYLALHKTRWGRFVYAIGGNPE FT AARLAGVNVKRVLVSVYVVIGCLAGLAGFILSARLGSAEAVAGISFELRVIASVVIGGT FT SLMGGYGRIGGTIIGSIIMGILINGLVLMNVSAYYQQIITGLIIVLAVAFDTYAKNRRG FT AL" FT gene 273195..274328 FT /locus_tag="YP516_1159" FT CDS 273195..274328 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1159" FT /product="Myo-inositol 2-dehydrogenase" FT /EC_number="1.1.1.18" FT /note="GO_function: GO:0016491 - oxidoreductase activity; FT GO_function: GO:0005488 - binding; GO_function: GO:0003824 FT - catalytic activity; GO_function: GO:0050112 - inositol FT 2-dehydrogenase activity; GO_process: GO:0006118 - electron FT transport; GO_process: GO:0008152 - metabolic process" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q1CKT1" FT /protein_id="EEO77489.1" FT /translation="MKEVRIGLIGTGYIGKAHAIAYAQAPTVFELRGKLVREMVAEVSP FT ALAAQRAQAFGFNRFTCDWRELVADPAIDVVDICSPNYLHKEMALAAIHHGKHVYAEKP FT LALNARDASEMAAAATRAGVKTLVGFNYIKNPSAKLAKEIIERGEIGEVIHFYGTHNED FT YMADPNTPIHWHCLHATAGLGALGDLAAHIVSMAQYLVGEITQVCGDLKTVVVTRPASV FT GSSARVAVENEDQAHAMVRFVNGAQGVIEASRVACGRKMGLSYMITGTQGAISFTQERM FT AELKLYLHNDPVNRQGFRTLLVGPAHPEYAAFCMAAGHGIGFNDQKTVEVRDLIDGIAM FT DTPLWPDFAEGWKVSRILDAIALSHQDSRWVNVTDIV" FT gene 274360..276330 FT /locus_tag="YP516_1160" FT CDS 274360..276330 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1160" FT /product="putative carbohydrate kinase" FT /EC_number="2.7.1.92" FT /note="GO_function: GO:0047590 - FT 5-dehydro-2-deoxygluconokinase activity" FT /db_xref="InterPro:IPR018659" FT /db_xref="UniProtKB/TrEMBL:Q1CKT0" FT /protein_id="EEO77490.1" FT /translation="MSVEKQFSVSAEKTCNTENKCNTEKKFDVICMGRIAVDLYGQQIG FT ARLEDVASFAKYLGGSSGNVAYGSARQGLRSSMLARVGDEHMGRFLREELHQVGCDTSH FT LTTDKKRLTALVLLSIKDRDTFPLIFYRDNCADMAITAQDFSEQYIASARSLAITGTHL FT SHPNTREAVLTALRYARRNGVRTVLDIDYRPVLWGLTSLGDGETRFIESHQVTAELLAV FT FNLFDVIVGTEEEFHIAGGSTNTLDALRGVREVSDAALVCKRGALGCSVYTEAIPQTLD FT EGLTVSGVRVKVLNVLGAGDAFMSGLLRGYLNDEGWPQACRYANACGALVVSRHGCAPA FT MPSKIELDNYLARADAVVRPDLDVHLNHLHRVTTRRRQWPELCVMAFDHRSQLEEMALQ FT CGADLCHISTLKTLILQASREAVHTAGLQGKAGLLCDGTFGQDALNAITGAGWWIGRPI FT ELPGSRPLAMEHGNIGSQLIGWPQEHIVKCLVFFHPEDAYSLRLEQEQKIIEVYRACCQ FT SGHELLLEVILPAGMPRSDELYLRAISRFYNLGVYPDWWKLPPLASEGWAALNKLIERR FT DPHCRGVVILGLDASLEALRTGFNAAAGYPIVKGFAVGRTLFGDASLAWLKRDIDDTQL FT IARIRDNYLQLITLWRERGQK" FT gene 276483..277403 FT /locus_tag="YP516_1161" FT CDS 276483..277403 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1161" FT /product="Inosose dehydratase" FT /EC_number="4.2.1.44" FT /note="GO_function: GO:0050114 - myo-inosose-2 dehydratase FT activity" FT /db_xref="UniProtKB/TrEMBL:C4GR00" FT /protein_id="EEO77491.1" FT /translation="MRKTEADRHTTAVQLGINPLTWTNDDLPSLGAETSLETCLSEGKE FT AGFAGFELGNKFSREAGVLGPILEHHQLKLVSGWYSGRLLERSVEEEIVAVRSHLALLR FT ELGAKVMVFAEVSGCIHGEQQTPVHLRPRFPPARWAEYGAKLTAFARYTQALGVQIAYH FT HHMGTVIESAQDIDNLMIHTGEEVGLLLDTGHLTFAGADPLAVAQRWIARINHVHCKDV FT RTSVLADVKNRKTSFLDAVLSGVFTVPGDGGVDYPPIMALLKQHGYQGWLVVEAEQDPN FT VAHPMTYARMGYHNLSRLAHNAGLI" FT gene 277413..278228 FT /locus_tag="YP516_1162" FT CDS 277413..278228 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1162" FT /product="5-keto-2-deoxygluconokinase B" FT /EC_number="2.7.1.92" FT /note="GO_function: GO:0047590 - FT 5-dehydro-2-deoxygluconokinase activity" FT /db_xref="InterPro:IPR010669" FT /db_xref="UniProtKB/TrEMBL:Q1CKS8" FT /protein_id="EEO77492.1" FT /translation="MSRLLSRRQAPDERGLTQRITPAQAGWGYVGFEVYELNEGQPLTL FT TAVPDERCLVLIAGRASISTPSAQFPNIGDRMSPFERHKPWAVYVTPGEAVQVQAITPL FT ELAVCSAPGKGTYPTRLISPEDIGAEARGKGHNQRYVHNILPEDHPADSLLVVEVYTNE FT GASSSYPSHKHDTDNPPHETYLEETYYHRLNPEQGFCMQRVYTDDRSLDECMAVYNREV FT VMVPRGYHPVATMAGYDSYYLNVMAGPVRKWIFSWENDHVWINHNYPIT" FT gene 278387..278590 FT /locus_tag="YP516_1163" FT CDS 278387..278590 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1163" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C4GR02" FT /protein_id="EEO77493.1" FT /translation="MDFSFNPTELGSWIFYIIVFSMIYWPVVAAMCVGLIVAAVLRKRW FT FIIIFAVPLALIALSFITLMLM" FT gene complement(278431..278733) FT /locus_tag="YP516_1164" FT CDS complement(278431..278733) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1164" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q1CKS7" FT /protein_id="EEO77494.1" FT /translation="MQSPSNNSRAHCSKPFLYRQNQWHFNQAISEYRLPAPLSAQDLTD FT SVNHINMSVIKDNAIRASGTAKIMMNHRLRRTAATIKPTHIAATTGQYIIEKTMI" FT gene 278798..280588 FT /locus_tag="YP516_1165" FT CDS 278798..280588 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1165" FT /product="putative ABC transport protein" FT /note="GO_component: GO:0016021 - integral to membrane; FT GO_function: GO:0042626 - ATPase activity, coupled to FT transmembrane movement of substances; GO_function: FT GO:0005524 - ATP binding; GO_function: GO:0016887 - ATPase FT activity; GO_function: GO:0017111 - FT nucleoside-triphosphatase activity; GO_function: GO:0000166 FT - nucleotide binding; GO_process: GO:0006810 - transport" FT /db_xref="InterPro:IPR017940" FT /db_xref="UniProtKB/TrEMBL:Q1CKS6" FT /protein_id="EEO77495.1" FT /translation="MDRSRILKFLLPYLWPKDNPKLRYYLIIALFFMVIAKISTTLVPL FT AYKSMVDTLSSENAKMLAIPISLIIAYGVARVSASLFEELRNVMFVHVSQNATRLLGLR FT VFRQLHALSLRFHLERQTGGLSLSIERGTQAVSTVLSRLLFSILPILFEITLVSVIMWR FT LLSGWFALAILVTVSCYILFTVMAVGWRTRFRRELNKANADANTKSIDSLLNYETVKYF FT GNEDFEAERFNLSRQLYEYAAIKNQISFTVLSFGQTAIISVGLIVMMAMAAQGIVQGQM FT TIGDFVLVNAYLLQLYQPLNFFGFIYSEIRQALIDMENMLDLLMVKQEITDRPDALPLQ FT LTKGEVRFDAVSFSYDPRRPILNNVSFTIPPGKTVAIVGASGAGKSTLARLLFRFYDVT FT AGAVYLDDQDIRGVTQSSLREAIGIVPQDTVLFNDTLRYNIGYGKTDSTDEEIERAAKL FT AHIHEFIISLPDGYETRVGERGLKLSGGEKQRVAIARTILKKPSILVFDEATSALDTHT FT EREIQSHLREVSRDHTTLVIAHRLSTIIDADEIIVLEAGSIVERGRHDELLLKNGRYAG FT MWQNQYHEEEAYHEAEQPVL" FT gene complement(280604..280891) FT /locus_tag="YP516_1166" FT CDS complement(280604..280891) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1166" FT /product="hypothetical protein" FT /note="GO_component: GO:0005737 - cytoplasm; GO_function: FT GO:0016491 - oxidoreductase activity; GO_process: FT GO:0017000 - antibiotic biosynthetic process" FT /db_xref="InterPro:IPR007138" FT /db_xref="UniProtKB/TrEMBL:Q1CKS5" FT /protein_id="EEO77496.1" FT /translation="MLKVIAQDFIKLEHINDVLPLYKELVAKTKLEALCLSYDLFIDHN FT DPGHFIFIEEWPDQAALDTHCATEHFRRLVPQINHYQRQACAVTLMRPLE" FT gene 281334..281528 FT /locus_tag="YP516_1167" FT CDS 281334..281528 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1167" FT /product="hypothetical protein" FT /note="GO_function: GO:0003887 - DNA-directed DNA FT polymerase activity; GO_function: GO:0003677 - DNA binding; FT GO_process: GO:0006260 - DNA replication" FT /db_xref="UniProtKB/TrEMBL:Q1CKS4" FT /protein_id="EEO77497.1" FT /translation="MSTLEKLVSAYCHTSLDFVASTVAFMESQKKNIDVDKIEAKLSVD FT ERHFFRKRLTYYRDIYRPL" FT gene complement(281546..281728) FT /locus_tag="YP516_1168" FT CDS complement(281546..281728) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1168" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C4GR07" FT /protein_id="EEO77498.1" FT /translation="MKTSHRAISTVREARKAIRSGYDKPIPKKGIKTGFKIDKPPDEMT FT TIEVHITQVAYLISV" FT gene complement(281910..282875) FT /locus_tag="YP516_1169" FT CDS complement(281910..282875) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1169" FT /product="putative membrane protein" FT /db_xref="UniProtKB/TrEMBL:C4GR08" FT /protein_id="EEO77499.1" FT /translation="MRNVGLHALKTLSCFSAVTFYSASKTCTEQCFLSGEVMGVLYFLS FT IIATPLFFMIIGYIDSNDKIDQKDIFRKLKSIITIIIFWNVLFYFINEDGFKRGYFLQS FT WLLFSIAIIYLINPIISKILKSNRTAIITLSCLVIFSVTIDLISAFSERPYLIDFPQYF FT RLWTWIFYYMTGRFLCSRICQKMTKLPKVRLAAKLLLLPTSISMYYYESFMSIYVYKTV FT NASYFLDNFHVLVLSLCLFVIFDNFDTQYEWIKKTLAYISPSMIGVYILHDGIFYFIAS FT AYNLSDVTLRFTLLLSVFAASVLLSRALLLNKYTSRFISF" FT gene 283298..283915 FT /locus_tag="YP516_1170" FT CDS 283298..283915 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1170" FT /product="putative LuxR-family regulatory protein" FT /note="GO_component: GO:0005622 - intracellular; FT GO_function: GO:0000156 - two-component response regulator FT activity; GO_function: GO:0043565 - sequence-specific DNA FT binding; GO_function: GO:0003700 - transcription factor FT activity; GO_process: GO:0006355 - regulation of FT transcription, DNA-dependent" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q1CKS1" FT /protein_id="EEO77500.1" FT /translation="MGIAKMISCMIVDNDKYQTLGMVSIVKKIFTSLGFKKEIKFYRKA FT FYSADVIFIGVDEFSFFEALKRLDKTPAEADVFLICDARLNSFLQGIPRFSDVTMIFRE FT DSLETVSNKIATVFKRKFRGFKDNLIERKTAKVLHLVSSERQYLTPNENIVLKLFNEGF FT SGGDIARILKKSEKTVSGQKRSAMKKLGARTDVELIKMFMFK" FT gene complement(284225..284716) FT /locus_tag="YP516_1171" FT CDS complement(284225..284716) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1171" FT /product="putative cold-shock protein" FT /note="GO_function: GO:0003677 - DNA binding; GO_process: FT GO:0006355 - regulation of transcription, DNA-dependent" FT /db_xref="InterPro:IPR012340" FT /db_xref="UniProtKB/TrEMBL:Q1CKS0" FT /protein_id="EEO77501.1" FT /translation="MRCMMNGRITTFFEDKGFGFITDENGDNRYFHVIKVANPEMIKKG FT AEVTFEPTTNTKGLSAFAVKVAIESKYIFIANERIKLTSIKSFNTFTKEVPAQAEVDKA FT NTILSVNLLMNKIRPQEEDISEKTIPLKMLSITTFQNVTYTFSEHEVDIDSTVAKLKSI FT " FT gene complement(284968..285201) FT /locus_tag="YP516_1172" FT CDS complement(284968..285201) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1172" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q1CKR9" FT /protein_id="EEO77502.1" FT /translation="MGYLDSDNISSRWPFGTVRDFKFYTLAFSKRFETIASDGRKMNKN FT VLATIFWGNEAETFGFIEPLNATFNLRHQTYL" FT gene 284983..285192 FT /gene="cspE" FT /locus_tag="YP516_1173" FT CDS 284983..285192 FT /codon_start=1 FT /transl_table=11 FT /gene="cspE" FT /locus_tag="YP516_1173" FT /product="DNA-binding transcriptional repressor" FT /note="GO_function: GO:0003677 - DNA binding; GO_function: FT GO:0003676 - nucleic acid binding; GO_process: GO:0006355 - FT regulation of transcription, DNA-dependent" FT /db_xref="UniProtKB/TrEMBL:C4GR12" FT /protein_id="EEO77503.1" FT /translation="MSKIKGSVKWFNESKGFGFITPEDGSKDVFVHFSAIASNGFKTLA FT EGQRVEFEITNGAKGPSAANVIAI" FT gene complement(285615..285998) FT /gene="crcB" FT /locus_tag="YP516_1174" FT CDS complement(285615..285998) FT /codon_start=1 FT /transl_table=11 FT /gene="crcB" FT /locus_tag="YP516_1174" FT /product="predicted inner membrane protein associated with FT chromosome condensation" FT /note="GO_component: GO:0016020 - membrane" FT /db_xref="InterPro:IPR003691" FT /db_xref="UniProtKB/TrEMBL:Q1CKR8" FT /protein_id="EEO77504.1" FT /translation="MFNTLLAVFIGGGVGSMARWLVSLKLNSASAHLPVGTLIVNLVGA FT FIIGLTLAFFSRMTHIDPVWKLLITTGFCGGLTTFSTFSVEVVYLIQEGKLAWAAGTIL FT LNVAGSLAMTMLAFILVNNFASQ" FT gene 286358..286510 FT /locus_tag="YP516_1175" FT CDS 286358..286510 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1175" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C4GR14" FT /protein_id="EEO77505.1" FT /translation="MRQNAKQTRELIIVHLRNLLHIRVVFIGNLFVNEPEFNSLLFYTL FT NCFIN" FT gene 286565..286822 FT /gene="tatE" FT /locus_tag="YP516_1176" FT CDS 286565..286822 FT /codon_start=1 FT /transl_table=11 FT /gene="tatE" FT /locus_tag="YP516_1176" FT /product="component of Sec-independent translocase" FT /note="GO_component: GO:0016021 - integral to membrane; FT GO_function: GO:0008565 - protein transporter activity; FT GO_process: GO:0015031 - protein transport" FT /db_xref="InterPro:IPR006312" FT /db_xref="UniProtKB/TrEMBL:Q1CKR7" FT /protein_id="EEO77506.1" FT /translation="MEGLSITKLLVVGILIVLLFGTSKLRTLGADLGAALKGFKKAMRN FT DDEVSTSVLGETKMSAETKTVAETKAASDSQAAASVERKD" FT gene complement(287003..287968) FT /gene="lipA" FT /locus_tag="YP516_1177" FT /note="similar to lip" FT CDS complement(287003..287968) FT /codon_start=1 FT /transl_table=11 FT /gene="lipA" FT /locus_tag="YP516_1177" FT /product="lipoate synthase" FT /note="GO_function: GO:0003824 - catalytic activity; FT GO_function: GO:0016992 - lipoate synthase activity; FT GO_function: GO:0051536 - iron-sulfur cluster binding; FT GO_function: GO:0005506 - iron ion binding; GO_process: FT GO:0008152 - metabolic process; GO_process: GO:0009107 - FT lipoate biosynthetic process" FT /db_xref="InterPro:IPR007197" FT /db_xref="UniProtKB/Swiss-Prot:Q1CKR6" FT /protein_id="EEO77507.1" FT /translation="MSKPIQMERGVKYRDADKMALIPVKNVVTERQELLRKPEWLKIKL FT PTDSSRIQGIKAAMRKNGLHSVCEEASCPNLSECFNHGTATFMILGAICTRRCPFCDVA FT HGRPVTPDANEPEKLAQTIQDMGLRYVVITSVDRDDLRDGGAQHFADCISAIRAKNPTI FT KIETLVPDFRGRMDRALDILTATPPDVFNHNLENVPRVYRQVRPGANYDWSLKLLERFK FT EAHPDIPTKSGLMVGLGETNAEIVEVMHDLRRHGVTMLTLGQYLQPSRHHLPVQRYVSP FT AEFDEMKAEAMAMGFTHAACGPFVRSSYHADLQAKGMEVK" FT gene complement(288161..288850) FT /gene="lipB" FT /locus_tag="YP516_1178" FT CDS complement(288161..288850) FT /codon_start=1 FT /transl_table=11 FT /gene="lipB" FT /locus_tag="YP516_1178" FT /product="lipoyl-protein ligase" FT /EC_number="2.3.1.-" FT /note="GO_function: GO:0003824 - catalytic activity; FT GO_process: GO:0009107 - lipoate biosynthetic process; FT GO_process: GO:0006464 - protein modification process" FT /db_xref="UniProtKB/TrEMBL:C4GR17" FT /protein_id="EEO77508.1" FT /translation="MQQHKIILRQLGLQPYAPVSQAMHNFTEFRTDTTPDEIWLVEHQH FT VFTQGQAGKAEHVLMPGDIPVIQSDRGGQVTYHGPGQQVMYVMVDLKRAKIGVRQLVTA FT IENTVIETLAHFNIDSHARPDAPGVYVEQQKICSLGLRIRRGCSFHGLALNIAMDLEPF FT QRINPCGYAGMQMTQVSALQPGVTVADVQPVLVREFTRQLGYPTAKLQPWSLSDYLLSS FT HSSSSVL" FT gene complement(289074..289337) FT /gene="ybeD" FT /locus_tag="YP516_1179" FT CDS complement(289074..289337) FT /codon_start=1 FT /transl_table=11 FT /gene="ybeD" FT /locus_tag="YP516_1179" FT /product="conserved protein" FT /db_xref="InterPro:IPR007454" FT /db_xref="UniProtKB/Swiss-Prot:Q1CKR4" FT /protein_id="EEO77509.1" FT /translation="MKTKLNELLEFPCSFTYKVMGIAEPQLVDQVVEVVQRHAPGEYTP FT QVKPSSKGNYHSVSITITATHIDQVETLYEELGNLELVKMVL" FT gene complement(289535..290737) FT /gene="dacA" FT /locus_tag="YP516_1180" FT CDS complement(289535..290737) FT /codon_start=1 FT /transl_table=11 FT /gene="dacA" FT /locus_tag="YP516_1180" FT /product="putative penicillin-binding protein 5" FT /EC_number="3.4.16.4" FT /note="GO_function: GO:0008233 - peptidase activity; FT GO_function: GO:0009002 - serine-type D-Ala-D-Ala FT carboxypeptidase activity; GO_process: GO:0006508 - FT proteolysis" FT /db_xref="InterPro:IPR018044" FT /db_xref="UniProtKB/TrEMBL:Q1CKR3" FT /protein_id="EEO77510.1" FT /translation="MKYVITSRIIKSLALGTVIVMSAANADDVNLKTMIPGVPQIDAEA FT YILIDYNSGKVLAEMNADTRRNPASLTKMMTSYVIGQAIKSGKIGAEDMVTVGKDAWAT FT GNPEFKGSSLMFLKPGDRVPVSKLTRGINLQSGNDACVAMADYVAGSQDSFVNLMNNYV FT KALGLQNTHFKTVHGLDAEGQFSSARDMALIGQALIRDVPDEYAIYKEKEFTFNNIRQT FT NRNGLLWDTSLNVDGIKTGHTEAAGYNLVASATDGQMRLISVVLGGHTFKGRETESKKL FT LTWGFRFFETVAPLKVGKEFASEPVWFGDSDRVQLGVDKDAYLTIPRGRMKDLKASYVL FT NTPEIHAPLAKNQVVGTINFQLDGKTIDQRPLVVMNEVKEGGFFSRMVDYIKLMFHRWF FT G" FT gene complement(291140..292222) FT /gene="rlpA" FT /locus_tag="YP516_1181" FT CDS complement(291140..292222) FT /codon_start=1 FT /transl_table=11 FT /gene="rlpA" FT /locus_tag="YP516_1181" FT /product="minor lipoprotein" FT /db_xref="InterPro:IPR012997" FT /db_xref="UniProtKB/TrEMBL:Q1CKR2" FT /protein_id="EEO77511.1" FT /translation="MRKEWLWVGIASVLLSACIDQPPAPQQQVQQTYSGPVEEIGGAEP FT RYEPFNPNVNQDYKVNGQSYRIIKDPQNFSQIGLASSYGEEARGNTTATGEIFDPNALT FT AAHPTLPIPSYVRVTNVSNGRQIVVRVNDRGPYTPGRVIDLSRAAADRLNISNNTKVKI FT DFINVAPDGSLSGPGMVGTTIAKQSYALPSRPDLTSSGMGTPMQQDAPATGAAVQAIDN FT SQLSGTDATQPVASQSSGFLRAPTPVPAGVLESSEPVIDSAPVTPPVVANPGPVTTTPT FT SSAISGGYVVQVGALSDAQRAQSWQQSLSQRFGVPGKVSNSGSIYRVQLGPFSHRQQAV FT DLQQRLSNEAQQQSFIVAAP" FT gene complement(292232..293344) FT /gene="mrdB" FT /locus_tag="YP516_1182" FT /note="similar to rodA" FT CDS complement(292232..293344) FT /codon_start=1 FT /transl_table=11 FT /gene="mrdB" FT /locus_tag="YP516_1182" FT /product="cell wall shape-determining protein" FT /note="GO_component: GO:0009276 - 1-2nm peptidoglycan-based FT cell wall; GO_component: GO:0016021 - integral to membrane; FT GO_process: GO:0008360 - regulation of cell shape; FT GO_process: GO:0007049 - cell cycle" FT /db_xref="InterPro:IPR018365" FT /db_xref="UniProtKB/TrEMBL:Q1CKR1" FT /protein_id="EEO77512.1" FT /translation="MTDNQQKGSLWYKLHIDLPFLICILALLAYSAFVMWSASGQDIGM FT MERKVGQIAMGLIVMLVMAQIPPRVYESWAPYLYFVCVILLILVDAFGQISKGAQRWLD FT LGFIRFQPSEIAKIAVPLMVARFMNRDVCPPSLKNTGIALILIFIPTLLVAAQPDLGTS FT ILVAASGLFVLFLSGMSWRLIGVAVVLLAGFIPILWFFLMHGYQRDRVMMLLDPESDPL FT GAGYHIIQSKIAIGSGGLSGKGWLHGTQSQLEFLPERHTDFIFAVLAEELGLIGVLVLL FT GLYLCLIMRGLVIAANAQTTFGRVMVGGLMLILFVYVFVNIGMVSGILPVVGVPLPLVS FT YGGSALVVLMAGFGIVMSIHTHRKMLSKNL" FT gene complement(293529..295424) FT /gene="mrdA" FT /locus_tag="YP516_1183" FT /note="similar to pbpA" FT CDS complement(293529..295424) FT /codon_start=1 FT /transl_table=11 FT /gene="mrdA" FT /locus_tag="YP516_1183" FT /product="penicillin-binding protein 2" FT /EC_number="2.4.1.129" FT /note="GO_function: GO:0008658 - penicillin binding; FT GO_function: GO:0008955 - peptidoglycan glycosyltransferase FT activity; GO_process: GO:0009273 - peptidoglycan-based cell FT wall biogenesis" FT /db_xref="InterPro:IPR017790" FT /db_xref="UniProtKB/TrEMBL:Q1CKR0" FT /protein_id="EEO77513.1" FT /translation="MKKEPNPFRDYSAESALFVRRAVVAFLGILLLSGVLVANLYNLQI FT IRFDDYSTRSNDNRIKLVPIAPSRGMIFDRNGTPLALNRTIYQLELMPEKIENLSATLN FT ALRPIVDLTDDDIANFEKERKRSRRFTSIAVKTPLTEVQVARFAVNQFRFPGIEVKGYQ FT RRFYPYGSALTHVIGYVSKINDKDVERLDKEGILPNYAATHDIGKLGIERYYESTLHGK FT TGYEEVEVNNRGRVIRQLHEQPPQAGKDIYLTLDLSLQIYIEKLLSGSRAAVVVTDPRT FT GGILALVSNPSYDPNLFVDGISNKDYQGLLNDTNRPLINRATQGVYPPASTVKPYIAVS FT ALSAGVITKNTSLFDPGWWQLPGSEKRYRDWKKWGHGRLNVTKALEESADTFFYQVAYD FT MGIDRLSSWMSKFGYGEYTGIDLSEERAGLMPTREWKQKRHKKPWYQGDTIPVGIGQGY FT WTATPIQMAKSLMTLINDGTVKTPHLLQSTRIDGVLVPYKQEDSTQIGSINSGYWEIAK FT DGMYGVANRPNGTGRKFFEGTPYKAAAKSGTAQVYSYETYNASKVAEHLRDHKLMVAFA FT PYENPTVSVAIILENGGAGPAVGTITRQILDHILLGDNNTELPDAVPLPPGVEAD" FT gene complement(295506..295976) FT /gene="ybeA" FT /locus_tag="YP516_1184" FT CDS complement(295506..295976) FT /codon_start=1 FT /transl_table=11 FT /gene="ybeA" FT /locus_tag="YP516_1184" FT /product="conserved protein" FT /db_xref="InterPro:IPR003742" FT /db_xref="UniProtKB/Swiss-Prot:Q1CKQ9" FT /protein_id="EEO77514.1" FT /translation="MKLQLVAVGTKMPDWVQTGFIEYLRRFPKDMPFELAEIPAGKRGK FT NADIKRILEKEGELMLAAVGKNNRIVTLDIPGTPWETPQLAQQLERWKQDGRDVSLLIG FT GPEGLAPACKAAAEQSWSLSPLTLPHPLVRVLVAESLYRAWSITTNHPYHRE" FT gene complement(295980..296297) FT /gene="ybeB" FT /locus_tag="YP516_1185" FT CDS complement(295980..296297) FT /codon_start=1 FT /transl_table=11 FT /gene="ybeB" FT /locus_tag="YP516_1185" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR004394" FT /db_xref="UniProtKB/TrEMBL:Q1CKQ8" FT /protein_id="EEO77515.1" FT /translation="MQGKALQEFVIDKLDDLKGQDIIALDVQGKSSITDCMIICTGTST FT RHVMALADNVVQESRAAGMIPLGIEGQGVSDWIVVDLGEVIVHVMQEESRRMYELEKLW FT S" FT gene complement(296521..297183) FT /gene="nadD" FT /locus_tag="YP516_1186" FT CDS complement(296521..297183) FT /codon_start=1 FT /transl_table=11 FT /gene="nadD" FT /locus_tag="YP516_1186" FT /product="nicotinic acid mononucleotide FT adenylyltransferase, NAD(P)-dependent" FT /EC_number="2.7.7.18" FT /note="GO_function: GO:0003824 - catalytic activity; FT GO_function: GO:0016779 - nucleotidyltransferase activity; FT GO_function: GO:0004515 - nicotinate-nucleotide FT adenylyltransferase activity; GO_process: GO:0009435 - NAD FT biosynthetic process; GO_process: GO:0009058 - biosynthetic FT process" FT /db_xref="InterPro:IPR014729" FT /db_xref="UniProtKB/Swiss-Prot:Q1CKQ7" FT /protein_id="EEO77516.1" FT /translation="MPIKSSDHSLYALFGGTFDPIHYGHLKPVEALAQQVGLQHIILLP FT NHVPPHRPQPEANAQQRLKMVELAVAGNPLFSVDSRELLRDSPSFTIETLEALRKERGA FT EQPLAFIIGQDSLLSLHKWHRWQALLDVCHLLVCARPGYSQSLETPELQQWLESHKVMD FT PQALSQRPHGAIYLADTPLLDISATDIRRRRHNGESCDDLLPQAVQRYIELQGLYRG" FT gene complement(297173..298207) FT /gene="holA" FT /locus_tag="YP516_1187" FT CDS complement(297173..298207) FT /codon_start=1 FT /transl_table=11 FT /gene="holA" FT /locus_tag="YP516_1187" FT /product="DNA polymerase III, delta subunit" FT /EC_number="2.7.7.7" FT /note="GO_component: GO:0005694 - chromosome; GO_component: FT GO:0043625 - delta DNA polymerase complex; GO_component: FT GO:0009360 - DNA polymerase III complex; GO_function: FT GO:0003891 - delta DNA polymerase activity; GO_function: FT GO:0003677 - DNA binding; GO_function: GO:0003887 - FT DNA-directed DNA polymerase activity; GO_process: FT GO:0006260 - DNA replication" FT /db_xref="InterPro:IPR010372" FT /db_xref="UniProtKB/TrEMBL:Q1CKQ6" FT /protein_id="EEO77517.1" FT /translation="MIRIYPEQLVAQLHEGLRACYLLCGNEPLLLQESQDHIRRVASQH FT DFTEHFSFALDAHTEWEHIFSLCQALSLFASRQTLLLSFPDSGLTAPISEQLVKLSGLL FT HPDILLILRANKLTKAQENSAWFKALSKNGVFVSCQTPEQAQLPRWVSARAKSLNLNVD FT DAAIQLLCYCYEGNLLALSQALERLSLLYPDGKLTLPKVEQAVNDAAHFTPYHWLDALL FT MGKSKRAWHILQQLQQEDSEPVILLRTVQRELLLLLALKRQMEQVPLRALFDQHKIWQN FT RRPMMTQALQRLSLQQLQQAVHLLTQMEIRLKQDYGQSIWPELETLSMLMCGKTLPESF FT FDAH" FT gene complement(298204..298827) FT /gene="rlpB" FT /locus_tag="YP516_1188" FT CDS complement(298204..298827) FT /codon_start=1 FT /transl_table=11 FT /gene="rlpB" FT /locus_tag="YP516_1188" FT /product="minor lipoprotein" FT /db_xref="InterPro:IPR007485" FT /db_xref="UniProtKB/Swiss-Prot:Q1CKQ5" FT /protein_id="EEO77518.1" FT /translation="MRHRILTLLLGLAVLVTAGCGFNLRGTTQVPTELQKLLLESSDPY FT GPLARSIRQQLRLNNVTIVDDAMRKDIPTLRIIGSSESQETVSIFRNGVAAENQLVLHV FT QAQVLIPGHDIYPLQVNVFRTFFDNPLTALAKEAEAEVLRQEMREQAAQQLVRQLLTVH FT AAEVKNTQKNGDKPVSDANAAQGSTPTAVNETTLGEPAVSTSAK" FT gene complement(298842..301424) FT /gene="leuS" FT /locus_tag="YP516_1189" FT CDS complement(298842..301424) FT /codon_start=1 FT /transl_table=11 FT /gene="leuS" FT /locus_tag="YP516_1189" FT /product="leucyl-tRNA synthetase" FT /EC_number="6.1.1.4" FT /note="GO_component: GO:0005737 - cytoplasm; GO_function: FT GO:0004812 - aminoacyl-tRNA ligase activity; GO_function: FT GO:0005524 - ATP binding; GO_function: GO:0004823 - FT leucine-tRNA ligase activity; GO_function: GO:0000166 - FT nucleotide binding; GO_process: GO:0006418 - tRNA FT aminoacylation for protein translation; GO_process: FT GO:0006429 - leucyl-tRNA aminoacylation; GO_process: FT GO:0006412 - translation" FT /db_xref="InterPro:IPR013155" FT /db_xref="UniProtKB/Swiss-Prot:Q1CKQ4" FT /protein_id="EEO77519.1" FT /translation="MQEQYRPEDIETQVQLHWQEKQTFKVTEDASKEKYYCLSMLPYPS FT GRLHMGHVRNYTIGDVISRYQRMLGKNVLQPIGWDAFGLPAEGAAVKNNTAPAPWTYDN FT IEYMKNQLKLLGFGYDWDREIATCKPDYYRWEQWFFTKLYEKGMVYKKTSAVNWCPHDL FT TVLANEQVIDGCCWRCDTKVERKEIPQWFIKITDYAEQLLNDLDTLESWPEQVKTMQRN FT WIGRSEGVDIVFDVVDSEEKLSVYTTRPDTFMGVTYVAVAAGHPLSLQAAATNPALADF FT VAECRNTKVAEAEMATMEKKGMATGLYAIHPLTGEKLPIWAANFVLMDYGTGAVMAVPG FT HDARDWEFATKYNLPIKPVILAADGSEPDLSQEAMTEKGTLFNSGEFDGLNHEDGFNAI FT ADKLVALGVGQRKVNYRLRDWGVSRQRYWGAPIPMVTLEDGTVVPTPEDQLPVILPEDV FT VMDGISSPIKADPEWAKTTVNGIPGLRETDTFDTFMESSWYYARYTCPQYDDGMLDPAA FT ANYWLPVDQYVGGIEHAIMHLMYFRFFHKLLRDAGLVDSDEPAKRLLCQGMVLADAFYY FT TGNNGERIWVSPVDAIVERDDKGRIVKAVDAEGHELVYAGMSKMSKSKNNGIDPQVMVE FT KYGADTVRLFMMFASPAEMTLEWQESGVEGANRFLKRVWRLAFDHTAKGAVKPLDIASL FT TEEQKSLRRDLHKTIAKVTDDVGRRQTFNTAIAAVMELMNKLGRAPQETEQDRALMQEA FT LLAVVRMLYPFTPHVCFSLWQALGGEGDIDTAPWPIADEQAMVEDSKLVVVQVNGKVRG FT RITVPADATEQQVRERAGQEHLVAKYLDGVTVRKVIYVPGKLLNLVVG" FT gene complement(301483..301617) FT /locus_tag="YP516_1190" FT CDS complement(301483..301617) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1190" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C4GR29" FT /protein_id="EEO77520.1" FT /translation="MSSSGCGPLTLVIYAIHCAEKSFHGVLSVVAPAAYQLCYADLSL" FT gene 301685..302167 FT /gene="ybeL" FT /locus_tag="YP516_1191" FT CDS 301685..302167 FT /codon_start=1 FT /transl_table=11 FT /gene="ybeL" FT /locus_tag="YP516_1191" FT /product="conserved protein" FT /note="GO_function: GO:0004017 - adenylate kinase activity" FT /db_xref="InterPro:IPR009912" FT /db_xref="UniProtKB/TrEMBL:Q1CKQ3" FT /protein_id="EEO77521.1" FT /translation="MNKIAQYYRELVASLTERLKNGERDIDQLVESAERRLHTVEELTR FT NDVEQIVQAVRRDLEEFARSYEESKEEFRDSVFMRVIKESLWQELADITDKTQLEWREV FT FKDVSHHGVYHSGEVVGLGNLVCEKCHYHLAFYTPEVLPVCPKCGHDQFTRRPFQP" FT gene complement(302301..303026) FT /gene="gltL" FT /locus_tag="YP516_1192" FT CDS complement(302301..303026) FT /codon_start=1 FT /transl_table=11 FT /gene="gltL" FT /locus_tag="YP516_1192" FT /product="glutamate and aspartate transporter subunit, FT ATP-binding component of ABC superfamily" FT /note="GO_function: GO:0016887 - ATPase activity; FT GO_function: GO:0005524 - ATP binding; GO_function: FT GO:0017111 - nucleoside-triphosphatase activity; FT GO_function: GO:0000166 - nucleotide binding" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:Q1CKQ2" FT /protein_id="EEO77522.1" FT /translation="MISLKNVSKWYGQFQVLADCTTEVKKGEVVVVCGPSGSGKSTLIK FT VVNGLEPIQEGNITVNGIAVNDKGTNLAQLRSKVGMVFQHFELFPHLSIIENLTLAQIK FT VLKRDKAEALEKGLKLLERVGLSTHVDKYPSQLSGGQQQRVAIARALCMDPIAMLFDEP FT TSALDPEMINEVLDVMVKLALEGMTMMVVTHEMGFARKVANRVIFMDEGKIVEDSDKDD FT FFNNPKSDRAKDFLAKILH" FT gene complement(303026..303700) FT /gene="gltK" FT /locus_tag="YP516_1193" FT CDS complement(303026..303700) FT /codon_start=1 FT /transl_table=11 FT /gene="gltK" FT /locus_tag="YP516_1193" FT /product="glutamate and aspartate transporter subunit, FT membrane component of ABC superfamily" FT /note="GO_component: GO:0016021 - integral to membrane; FT GO_component: GO:0009276 - 1-2nm peptidoglycan-based cell FT wall; GO_component: GO:0016020 - membrane; GO_function: FT GO:0005215 - transporter activity; GO_process: GO:0006810 - FT transport" FT /db_xref="InterPro:IPR010065" FT /db_xref="UniProtKB/TrEMBL:Q1CKQ1" FT /protein_id="EEO77523.1" FT /translation="MYEFDWSSIAPSLPYLLQGLIVTVKITLIAIVFGILWGTILAVMR FT LSPIKAISWFATAYVNVFRSIPLVMVLLWFYLVVPGFLQNVLGLSPKTDIRLISAMVAF FT SLFEAAYYSEIIRAGIQSISRGQSSAALALGMTQGQSMRLVILPQAFRAMVPLLLTQGI FT VLFQDTSLVYVLSLADFFRTATTIGERDGTQVEMVLFAGLVYFVISISASMLVNYLKKR FT TV" FT gene complement(303700..304440) FT /gene="gltJ" FT /locus_tag="YP516_1194" FT CDS complement(303700..304440) FT /codon_start=1 FT /transl_table=11 FT /gene="gltJ" FT /locus_tag="YP516_1194" FT /product="glutamate and aspartate transporter subunit, FT membrane component of ABC superfamily" FT /note="GO_component: GO:0016021 - integral to membrane; FT GO_component: GO:0009276 - 1-2nm peptidoglycan-based cell FT wall; GO_component: GO:0016020 - membrane; GO_function: FT GO:0005215 - transporter activity; GO_process: GO:0006810 - FT transport" FT /db_xref="InterPro:IPR010065" FT /db_xref="UniProtKB/TrEMBL:Q1CKQ0" FT /protein_id="EEO77524.1" FT /translation="MAIDWNWGIFLQPAPFGNTTYLGWIWSGFQVTVALSLCAWVIAFF FT VGSLFGILRTVPNRILSGIGACYVELFRNVPLIVQFFTWYLVVPELLPVNLGTWFKSEL FT APNIQFFLSSMICLGLFTAARVCEQVRAGIQSLPRGQKAAGLAMGLTLTQTYRYVLLPN FT AYRVIIPPMTSEMLNLVKNSAIASTIGLVEMAAQAGKLLDYSAHAYESFTAITLGYVLI FT NAVIMLLMRLVEKKVQLPGNLGSK" FT gene complement(304614..305531) FT /gene="gltI" FT /locus_tag="YP516_1195" FT /note="similar to glnH" FT CDS complement(304614..305531) FT /codon_start=1 FT /transl_table=11 FT /gene="gltI" FT /locus_tag="YP516_1195" FT /product="glutamate and aspartate transporter subunit, FT periplasmic-binding component of ABC superfamily" FT /note="GO_component: GO:0030288 - outer membrane-bounded FT periplasmic space; GO_function: GO:0005215 - transporter FT activity; GO_process: GO:0006810 - transport" FT /db_xref="InterPro:IPR001638" FT /db_xref="UniProtKB/TrEMBL:Q1CKP9" FT /protein_id="EEO77525.1" FT /translation="MQMRKLALVLLLAGMTSSVAQAEDATAKADTAIDTLQKVKNNGVI FT VVGHRESSVPFSYYDNQQKVVGYSQDYSNLIVDAIRKELNAPNLEVKLIPITSQNRIPL FT LQNGTFDFECGSTTNNLERQQQAAFSNTIFVVGTRLLTKKDSEVKDFKDLAGKAVVVTS FT GTTSEVLLNKLNEKDNMNMRIISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKP FT DEWSIVGTPQSEEAYGCMMRKNDPAFKALLDKTIATAQTTGVAEKSFDRWFKNPIPPKN FT LNMNFALSDEMKALFKAPNDKALN" FT gene complement(306296..307843) FT /gene="lnt" FT /locus_tag="YP516_1196" FT /note="similar to cutE" FT CDS complement(306296..307843) FT /codon_start=1 FT /transl_table=11 FT /gene="lnt" FT /locus_tag="YP516_1196" FT /product="apolipoprotein N-acyltransferase" FT /note="GO_component: GO:0016021 - integral to membrane; FT GO_function: GO:0016410 - N-acyltransferase activity; FT GO_process: GO:0006807 - nitrogen compound metabolic FT process; GO_process: GO:0042158 - lipoprotein biosynthetic FT process" FT /db_xref="UniProtKB/TrEMBL:C4GR35" FT /protein_id="EEO77526.1" FT /translation="MSIALFLQRQWVRALLALFFGACGTLAYSPFDHWPAAIVSLFGLL FT SLTLNRTTKQATFIGFCWGMGLFGSGINWVYVSISEFGGMPTAINIVLVILLAAYLSLY FT TMLFAGLLARLCPKATWWRLAIAAPVLWQLTEFLRGWVLTGFPWLQFGYSQINGPLRGI FT APLLGVDGITFILMAISGLLVYACYQRRIVAAIIALALLLLPWPLRQIQWFTPEPERAV FT NIAMVQGNIAQSMKWDPKALITTLQIYLDETRPFMGKAPIIIWPESAIPDIETDQNTFL FT TMIDGLMRANHSSLITGIVDAKRQPEGQGYQFFNSIIVLGDKDTYQYPTRNRYSKHHLV FT PFGEYVPLESLLRPLAPLFNLPMSSFNRGDYVQPPLTIAGFNLTAAICYEIVLGQQVRD FT NFRPETDFLLTISNDAWFGHSIGPWQHFQMARMRALELGRPLLRSTNNGITAAIGPSGE FT ILAQIPQFTQQVLEVKVTPTTGITPYARFGSWPMWIITLVLGAFTLYCAIRGRSDKH" FT gene complement(307851..308729) FT /gene="corC" FT /locus_tag="YP516_1197" FT /note="similar to ybeX" FT CDS complement(307851..308729) FT /codon_start=1 FT /transl_table=11 FT /gene="corC" FT /locus_tag="YP516_1197" FT /product="predicted ion transport" FT /db_xref="InterPro:IPR005170" FT /db_xref="UniProtKB/TrEMBL:Q1CKP7" FT /protein_id="EEO77527.1" FT /translation="MSDDHSQNSDSPSPKKGFFTLILNQLFHGEPKNRGDLVELIRDSE FT QNDLIDPDTRDMLEGVMDIAEQRVRDIMIPRSQMVTLKRNQTLDECLDVIIESAHSRFP FT VISEDKDHIEGILMAKDLLPFMRTDSEPFSIDKVLRTAIVVPESKRVDRMLKEFRSQRY FT HMAIVIDEFGGVSGLVTIEDILELIVGEIEDEYDDEEDRDVRQLSRHTYTIRALTQIED FT FNEVFNTHFSDDEVDTIGGLVMQAFGHLPARGETIEIEGYLFKVAMADSRRIIQVHVKI FT PDDAPQPKLEE" FT gene 308715..308867 FT /locus_tag="YP516_1198" FT CDS 308715..308867 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1198" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q1CKP6" FT /protein_id="EEO77528.1" FT /translation="MVVAHGVLVKFTHVSDDNVSSGRFTLLTVWANFNRAINVPFMTGL FT VGVFL" FT gene complement(308847..309320) FT /gene="ybeY" FT /locus_tag="YP516_1199" FT CDS complement(308847..309320) FT /codon_start=1 FT /transl_table=11 FT /gene="ybeY" FT /locus_tag="YP516_1199" FT /product="conserved protein" FT /db_xref="InterPro:IPR002036" FT /db_xref="UniProtKB/Swiss-Prot:Q1CKP5" FT /protein_id="EEO77529.1" FT /translation="MSQVILDLQIACADSQGLPTEGDFQRWLEAVLPLFQPVSEVTIRL FT VDEAESHDLNLTYRGKDKSTNVLSFPFEAPPEIELPLLGDLIICRQVVEKEAIEQEKAL FT LAHWAHMVVHGSLHLLGYDHIDDEEAEEMELIETEIMHGLGYPDPYISEKDPD" FT gene complement(309317..310390) FT /gene="ybeZ" FT /locus_tag="YP516_1200" FT /note="similar to phoL" FT CDS complement(309317..310390) FT /codon_start=1 FT /transl_table=11 FT /gene="ybeZ" FT /locus_tag="YP516_1200" FT /product="predicted protein with nucleoside triphosphate FT hydrolase domain" FT /note="GO_function: GO:0005524 - ATP binding; GO_function: FT GO:0003676 - nucleic acid binding; GO_process: GO:0016036 - FT cellular response to phosphate starvation" FT /db_xref="InterPro:IPR003714" FT /db_xref="UniProtKB/TrEMBL:Q1CKP4" FT /protein_id="EEO77530.1" FT /translation="MTQKNSLHVVTQEILLEPADNQRLLSLCGPFDDNIKQLERRLGIE FT INRRDNRFKLIGKNICVVAAADILRHLYVDTAPIRGVIPDIDPEQIHLAVKESRVLEQS FT AESVPDYGKAVNIQTKRGMVKPRTPNQAQYVANILDHDITFGIGPAGTGKTYLAVAAAV FT DALERQNVRRILLTRPAVEAGEKLGFLPGDLSQKVDPYLRPLYDALFEMLGFERVEKLI FT ERNVIEVAPLAYMRGRTLNDAFIILDESQNTTIEQMKMFLTRIGFNSKAVITGDVTQID FT LPRHQKSGLRHAIEVLSDVEELSFNFFHSEDVVRHPVVARIVIAYEAWEAAEQQRKDAI FT IEQRQRESHTPLEQEAP" FT gene complement(310717..312141) FT /gene="miaB" FT /locus_tag="YP516_1201" FT CDS complement(310717..312141) FT /codon_start=1 FT /transl_table=11 FT /gene="miaB" FT /locus_tag="YP516_1201" FT /product="isopentenyl-adenosine A37 tRNA methylthiolase" FT /note="GO_function: GO:0051536 - iron-sulfur cluster FT binding; GO_function: GO:0003824 - catalytic activity; FT GO_function: GO:0005506 - iron ion binding" FT /db_xref="InterPro:IPR013848" FT /db_xref="UniProtKB/Swiss-Prot:Q1CKP3" FT /protein_id="EEO77531.1" FT /translation="MTKKLHIKTWGCQMNEYDSSKMADLLASTHGYQLTTIPEEADLLL FT LNTCSIREKAQEKVFSLLGQWKLLKEKNPQLIIGVGGCVASQEGEQLRQRAPCVDVIFG FT PQTLHRLPEMINHVQGTNSPVVDISFPEIEKFDRLPEPRAEGPTAFVSIMEGCNKYCTF FT CVVPYTRGEEVSRPSDDILFEIAQLAAQGVREVNLLGQNVNAYRGATYDGDICSFAELL FT RLVAAIDGIDRVRFTTSHPIEFTDDIIDVYRDTPELVSFLHLPVQSGSDRILTMMKRAH FT TALEYKAIIRKLRQARPDIQISSDFIVGFPGETQQDFEQTMKLVADIHFDTSYSFIYSP FT RPGTPAADLPNNVSEEEKKQRLHILQQRISQQAMEISRKMVGTVQRVLVEGTSRKNVME FT LAGRTENNRVVNFEGSPDMIGKFVDVEIVNVYASSLRGILLRTEDQMDLRTHESPQSVI FT ARTRKENEIGVGIYQP" FT gene 312383..313564 FT /gene="ubiF" FT /locus_tag="YP516_1202" FT CDS 312383..313564 FT /codon_start=1 FT /transl_table=11 FT /gene="ubiF" FT /locus_tag="YP516_1202" FT /product="2-octoprenyl-3-methyl-6-methoxy-1,4-benzoquinone FT hydroxylase" FT /note="GO_function: GO:0015997 - (OBSOLETE) ubiquinone FT biosynthetic process monooxygenase activity; GO_function: FT GO:0050660 - FAD binding; GO_function: GO:0016709 - FT oxidoreductase activity, acting on paired donors, with FT incorporation or reduction of molecular oxygen, NADH or FT NADPH as one donor, and incorporation of one atom of FT oxygen; GO_function: GO:0016491 - oxidoreductase activity; FT GO_process: GO:0006118 - electron transport; GO_process: FT GO:0006744 - ubiquinone biosynthetic process; GO_process: FT GO:0008152 - metabolic process" FT /db_xref="InterPro:IPR010971" FT /db_xref="UniProtKB/TrEMBL:Q1CKP2" FT /protein_id="EEO77532.1" FT /translation="MNKSQPNYDVVVVGGGMVGAAAALGLAQIGWSVALLEHDAPAPFD FT KDSVPDLRVSALGCTSVALLKQLGAWPQVQQMRYAPYRRLETWEQPGSQVVFDAASLSL FT PELGFMVENRILQLALWQQFAECPNLTLLCPSRLQSMVRIDDYWKVTLNEQEEIQGRLV FT IGADGANSLVRRLAGIGTSGWQYRQSCMLITVETDVMQQDTTWQQFFPTGPRAFLPLFD FT HWASLVWYDSPQRIRQLQAMSMAQLSQEIAAFFPSRLGAVKAIAAGAFPLVRRHAQQYV FT KPGLVLLGDAAHTINPLAGQGVNLGYRDVDALLEVLSQARELAEPWHSEQVLLRYQRRR FT RTDNLMMQSGMDLFYTAFSNDLPAVKFARNLALMVAQRAGKLKEHALRYALGL" FT gene complement(313958..314032) FT /locus_tag="YP516_1203" FT tRNA complement(313958..314032) FT /locus_tag="YP516_1203" FT /product="tRNA-Gln" FT /note="GO_component: GO:0005829 - cytosol; GO_function: FT GO:0030533 - triplet codon-amino acid adaptor activity; FT GO_process: GO:0006414 - translational elongation" FT gene complement(314038..314114) FT /locus_tag="YP516_1204" FT tRNA complement(314038..314114) FT /locus_tag="YP516_1204" FT /product="tRNA-Met" FT /note="GO_component: GO:0005829 - cytosol; GO_function: FT GO:0030533 - triplet codon-amino acid adaptor activity; FT GO_process: GO:0006414 - translational elongation" FT gene complement(314147..314221) FT /locus_tag="YP516_1205" FT tRNA complement(314147..314221) FT /locus_tag="YP516_1205" FT /product="tRNA-Gln" FT gene complement(314317..314391) FT /locus_tag="YP516_1206" FT tRNA complement(314317..314391) FT /locus_tag="YP516_1206" FT /product="tRNA-Gln" FT gene complement(314421..314505) FT /locus_tag="YP516_1207" FT tRNA complement(314421..314505) FT /locus_tag="YP516_1207" FT /product="tRNA-Leu" FT /note="GO_component: GO:0005829 - cytosol; GO_function: FT GO:0030533 - triplet codon-amino acid adaptor activity; FT GO_process: GO:0006414 - translational elongation" FT gene complement(314513..314589) FT /locus_tag="YP516_1208" FT tRNA complement(314513..314589) FT /locus_tag="YP516_1208" FT /product="tRNA-Met" FT /note="GO_component: GO:0005829 - cytosol; GO_function: FT GO:0030533 - triplet codon-amino acid adaptor activity; FT GO_process: GO:0006414 - translational elongation" FT gene 314861..314998 FT /locus_tag="YP516_1209" FT CDS 314861..314998 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="YP516_1209" FT /product="hypothetical prote |