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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AB264323; SV 1; linear; mRNA; STD; MAM; 1476 BP.
XX
AC   AB264323;
XX
DT   22-SEP-2006 (Rel. 89, Created)
DT   01-MAY-2008 (Rel. 95, Last updated, Version 4)
XX
DE   Equus caballus TPH2 mRNA for tryptophan hydroxylase 2, complete cds.
XX
KW   .
XX
OS   Equus caballus (horse)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus.
XX
RN   [1]
RP   1-1476
RA   Momozawa Y., Takeuchi Y., Mori Y.;
RT   ;
RL   Submitted (01-JUL-2006) to the EMBL/GenBank/DDBJ databases.
RL   Contact:Yukari Takeuchi The University of Tokyo, Laboratory of Veterinary
RL   Ethology; 1-1-1, Yayoi, Bunkyo-ku, Tokyo 113-8657, Japan
XX
RN   [2]
RX   DOI; 10.1111/j.1365-2052.2006.01541.x
RX   PUBMED; 17257195.
RA   Momozawa Y., Takeuchi Y., Tozaki T., Kikusui T., Hasegawa T., Raudsepp T.,
RA   Chowdhary BP., Kusunose R., Mori Y.;
RT   "SNP detection and radiation hybrid mapping in horses of nine candidate
RT   genes for temperament";
RL   Anim. Genet. 38(1):81-83(2007).
XX
DR   Ensembl-Gn; ENSECAG00000013175; Equus_caballus.
DR   Ensembl-Tr; ENSECAT00000014095; Equus_caballus.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1476
FT                   /organism="Equus caballus"
FT                   /chromosome="28"
FT                   /mol_type="mRNA"
FT                   /db_xref="taxon:9796"
FT   CDS             1..1476
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="TPH2"
FT                   /product="tryptophan hydroxylase 2"
FT                   /db_xref="GOA:Q0EAB8"
FT                   /db_xref="InterPro:IPR019773"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q0EAB8"
FT                   /protein_id="BAF32950.1"
FT                   /translation="MQPAMMMFSSKYWARRGFSLDSAVPEEHQLLGNLTVNKSNSGKND
FT                   DKKGNKGSSRSETAPDSGKTAVVFSLRNEVGGLVKALKLFQEKHVNMVHIESRKSRRRS
FT                   SEVEIFVDCECGKTEFNELIQLLKFQTTIVTLNPPENIWTEEEELEDVPWFPRKISELD
FT                   KCSHRVLMYGSELDADHPGFKDNVYRQRRKYFVDVAMSYKYGQPIPRVEYTEEETKTWG
FT                   VVFRELSRLYPTHACQEYLKNFPLLTKYCGYREDNVPQLEDVSMFLKERSGFAVRPVAG
FT                   YLSPRDFLAGLAYRVFHCTQYVRHSSDPLYTPEPDTCHELLGHVPLLADPKFAQFSQEI
FT                   GLASLGASDEDVQKLATCYFFTIEFGLCKQEGQLRAYGAGLLSSIGELKHALSDKACVK
FT                   AFDPKTTCLQECLITTFQEAYFVSESFEEAKEKMREFAKSITRPFSVHFNPYTQSVEVL
FT                   KDSRSIESVVQDLRSDLNTVCDALNKMNQYLGV"
XX
SQ   Sequence 1476 BP; 409 A; 336 C; 391 G; 340 T; 0 other;
     atgcagccgg caatgatgat gttttccagt aaatactggg caaggagagg gttttccctg        60
     gattcagcgg tgcctgaaga gcatcagcta cttggcaact taacagtaaa taaatctaac       120
     tctggcaaaa atgatgataa aaaaggcaac aagggaagca gcagaagtga aactgctcct       180
     gacagtggca agacggcggt cgtgttctcc ctgcggaacg aagtgggtgg gttagtaaag       240
     gcattgaaac tcttccagga aaagcatgtc aacatggttc atattgagtc caggaaatcc       300
     cggcgaagaa gttcagaggt tgaaatcttc gtggattgtg agtgtggcaa aacagaattc       360
     aatgagctca ttcagttgtt gaaatttcaa accacaattg tgacattgaa tccaccagag       420
     aacatttgga cagaggaaga agagctagag gatgtgccct ggttcccccg gaagatctcg       480
     gagttagaca aatgctctca cagagttctc atgtatggtt ctgagctcga tgccgatcac       540
     ccagggttta aggacaacgt ctatagacag agaagaaagt attttgtgga cgtggccatg       600
     agttataaat atggtcagcc cattccccgg gtggagtaca cagaggaaga aacgaaaacg       660
     tggggtgttg tgttccggga gctctccaga ctctatccca cccacgcttg ccaggagtat       720
     ctgaaaaact tccctctgct gaccaaatac tgtggctaca gggaggacaa cgtgcctcag       780
     ctggaagacg tctccatgtt tctgaaagaa aggtctggct ttgcagtgag gcctgtggct       840
     gggtacctga gcccacgaga cttcctggca ggactggcct acagagtgtt ccactgcact       900
     cagtacgtgc ggcacagctc ggaccccctc tacaccccgg aaccagacac atgtcatgag       960
     ctcttgggac acgttccact acttgcagac cctaagtttg ctcagttttc acaagaaata      1020
     ggcctggcat ctctgggagc atcagatgaa gatgttcaga aactagcaac gtgctatttc      1080
     ttcaccatcg agtttggcct ttgtaagcag gaaggacagc tgagggcgta cggagcgggg      1140
     ctgctgtcct ccatcggaga gctgaagcac gctctttctg acaaggcgtg tgtgaaagcc      1200
     ttcgacccga agaccacgtg cttgcaggag tgcctcatca ccaccttcca ggaagcctat      1260
     tttgtctctg aaagttttga agaagccaaa gaaaagatga gggaatttgc gaagtcaatt      1320
     actcggccct tctcagtaca cttcaatccc tacacacaga gtgttgaagt tctgaaagac      1380
     agcagaagta ttgagagcgt cgtgcaggac ctccgcagcg acttgaatac agtgtgtgat      1440
     gccttgaaca aaatgaacca gtatctgggg gtttga                                1476
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