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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AB222138; SV 1; linear; mRNA; STD; MAM; 1976 BP.
XX
AC   AB222138;
XX
DT   16-MAY-2007 (Rel. 91, Created)
DT   01-AUG-2007 (Rel. 92, Last updated, Version 2)
XX
DE   Pan troglodytes verus pdha1 mRNA for pyruvate dehydrogenase alpha 1,
DE   complete cds, clone: PorB0603.
XX
KW   FLI_CDNA.
XX
OS   Pan troglodytes verus
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Pan.
XX
RN   [1]
RP   1-1976
RA   Hirai M., Sakate R., Hida M., Sugano S., Hayasaka I., Suto Y., Osada N.,
RA   Hashimoto K.;
RT   ;
RL   Submitted (19-JUL-2005) to the EMBL/GenBank/DDBJ databases.
RL   Momoki Hirai, Tokyo Women's Medical University, International Center for
RL   Molecular, Cellular and Immunological Research; 8-1 Kawadacho, Shinjuku-ku,
RL   Tokyo 162-8666, Japan (E-mail:mhirai@imcir.twmu.ac.jp, Tel:81-3-3353-8111,
RL   Fax:81-3-3352-3088)
XX
RN   [2]
RX   DOI; 10.1016/j.gene.2007.04.013
RX   PUBMED; 17574350.
RA   Sakate R., Suto Y., Imanishi T., Tanoue T., Hida M., Hayasaka I.,
RA   Kusuda J., Gojobori T., Hashimoto K., Hirai M.;
RT   "Mapping of chimpanzee full-length cDNAs onto the human genome unveils
RT   large potential divergence of the transcriptome";
RL   Gene 399(1):1-10(2007).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1976
FT                   /organism="Pan troglodytes verus"
FT                   /sub_species="verus"
FT                   /mol_type="mRNA"
FT                   /sex="female"
FT                   /dev_stage="adult"
FT                   /clone_lib="full-length enriched chimpanzee cDNA library"
FT                   /clone="PorB0603"
FT                   /tissue_type="cerebrum"
FT                   /db_xref="taxon:37012"
FT   CDS             71..1243
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="pdha1"
FT                   /product="pyruvate dehydrogenase alpha 1"
FT                   /note="pyruvate dehydrogenase (lipoamide) alpha 1"
FT                   /db_xref="GOA:A5A6L0"
FT                   /db_xref="InterPro:IPR017597"
FT                   /db_xref="UniProtKB/Swiss-Prot:A5A6L0"
FT                   /protein_id="BAF62383.1"
FT                   /translation="MRKMLAAVSRVLSGASQKPASRVLVASRNFANDATFEIKKCDLHR
FT                   LEEGPPVTTVLTREDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGL
FT                   EAGINPTDHLITAYRAHGFTFTRGLSVREILAELTGRKGGCAKGKGGSMHMYAKNFYGG
FT                   NGIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMAALWKLPCIFIC
FT                   ENNRYGMGTSVERAAASTDYYKRGDFIPGLRVDGMDILCVREATRFAAAYCRSGKGPIL
FT                   MELQTYRYHGHSMSGPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDV
FT                   EVRKEIEDAAQFATADPEPPLEELGYHIYSSDPPFEVRGANQWIKFKSVS"
XX
SQ   Sequence 1976 BP; 560 A; 429 C; 493 G; 494 T; 0 other;
     gacttggggg cacccgcgtc gtgcctcctg ggctgtgagg agtcgccgct gccgccactg        60
     cctgtgcttc atgaggaaga tgctcgccgc cgtctcccgc gtgctgtctg gcgcttctca       120
     gaagccggca agcagagtgc tggtagcatc ccgtaatttt gcaaatgatg ctacatttga       180
     aattaagaaa tgtgaccttc accggctgga agaaggccct cctgtcacaa cagtgctcac       240
     cagggaggat gggctcaaat actacaggat gatgcagact gtacgccgaa tggagttgaa       300
     agcagatcag ctgtataaac agaaaattat tcgtggtttc tgtcacttat gtgatggtca       360
     ggaagcttgc tgtgtgggcc tggaggccgg catcaacccc acagaccatc tcatcacagc       420
     ctaccgggct cacggcttta ctttcaccag gggcctttcc gtccgagaaa ttctcgcaga       480
     gcttacagga cgaaaaggag gttgtgctaa agggaaagga ggatcgatgc acatgtatgc       540
     caagaacttc tacgggggca atggcatcgt gggagcgcag gtgcccctgg gcgctgggat       600
     tgctctagcc tgtaagtata atggaaaaga tgaggtctgc ctgactttat atggcgatgg       660
     tgctgctaac cagggccaga tattcgaagc ttacaacatg gcagctttgt ggaaattacc       720
     ttgtattttc atctgtgaga ataatcgcta tggaatggga acgtctgttg agagagcagc       780
     agccagcact gattactaca agagaggcga tttcattcct gggctgagag tggatggaat       840
     ggatatcctg tgcgtccgag aggcgacaag gtttgctgct gcctattgta gatctgggaa       900
     ggggcccatc ctgatggagc tgcagactta ccgttaccat ggacacagta tgagtggtcc       960
     tggagtcagt taccgtacac gagaagaaat tcaggaagta agaagtaaga gtgaccctat      1020
     tatgcttctc aaggacagga tggtgaacag caatcttgcc agtgtggaag aactaaagga      1080
     aattgatgtg gaagtgagga aggagattga ggatgctgcc cagtttgcca cggccgatcc      1140
     tgagccgcct ttggaagagc tgggctacca catctactcc agtgacccac cttttgaagt      1200
     tcgtggtgcc aatcagtgga tcaagtttaa gtcagtcagt taaggggagg agaaggagag      1260
     gttatacctt cagggggcta ccagacagtg ttctcaactt ggttaaggag gaagaaaacc      1320
     cagtcaatga aattcttgta aacttccatt aagtgtgtag attgagcagg tagtaattgc      1380
     atgcagtttg tacattagtg catgaaaaga tgaattattg agtgcttaaa gattattttt      1440
     gacttaaaac agtatacttt gaacaaatac tctaattatg aaaaggaaga acaattcctt      1500
     gtatgcctgt ttcccctgcc cccactctaa ttatgaaaag gaagaacaat tccttgtatg      1560
     cctgtttccc ctgcccccac tctaattatg aaaaggaaga acaattcctt gtatgcctgt      1620
     ttcccctacc cccagccacc tttttgggag gagaccatta tcgcggggcc cctcacagcc      1680
     atacttatgg taacagccca cagcattcta ccaaccatag cacccacccc gagcagcgct      1740
     ggtgctgcag cctgttcgcg ctgaccatca tttctctaca agatacaata tttattatca      1800
     ggcaagagga cagttccatt ttaaaataag acttttgtaa tcatttcaat gtaatacctg      1860
     taacgattgg caatttgtta tatattagtc taaccataaa actcttcaaa agtaaccagt      1920
     tggattaata aatgattcca gaatgtaaaa aaaaaaaaaa aaaaaaaaaa aaaaaa          1976
//
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