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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AB222136; SV 1; linear; mRNA; STD; MAM; 2064 BP.
XX
AC   AB222136;
XX
DT   16-MAY-2007 (Rel. 91, Created)
DT   01-AUG-2007 (Rel. 92, Last updated, Version 2)
XX
DE   Pan troglodytes verus got1 mRNA for glutamic-oxaloacetic transaminase 1,
DE   soluble, complete cds, clone: PorA1393.
XX
KW   FLI_CDNA.
XX
OS   Pan troglodytes verus
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Pan.
XX
RN   [1]
RP   1-2064
RA   Hirai M., Sakate R., Hida M., Sugano S., Hayasaka I., Suto Y., Osada N.,
RA   Hashimoto K.;
RT   ;
RL   Submitted (19-JUL-2005) to the EMBL/GenBank/DDBJ databases.
RL   Momoki Hirai, Tokyo Women's Medical University, International Center for
RL   Molecular, Cellular and Immunological Research; 8-1 Kawadacho, Shinjuku-ku,
RL   Tokyo 162-8666, Japan (E-mail:mhirai@imcir.twmu.ac.jp, Tel:81-3-3353-8111,
RL   Fax:81-3-3352-3088)
XX
RN   [2]
RX   DOI; 10.1016/j.gene.2007.04.013
RX   PUBMED; 17574350.
RA   Sakate R., Suto Y., Imanishi T., Tanoue T., Hida M., Hayasaka I.,
RA   Kusuda J., Gojobori T., Hashimoto K., Hirai M.;
RT   "Mapping of chimpanzee full-length cDNAs onto the human genome unveils
RT   large potential divergence of the transcriptome";
RL   Gene 399(1):1-10(2007).
XX
DR   Ensembl-Gn; ENSPTRG00000002829; Pan_troglodytes.
DR   Ensembl-Tr; ENSPTRT00000005370; Pan_troglodytes.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2064
FT                   /organism="Pan troglodytes verus"
FT                   /sub_species="verus"
FT                   /mol_type="mRNA"
FT                   /sex="female"
FT                   /dev_stage="adult"
FT                   /clone_lib="full-length enriched chimpanzee cDNA library"
FT                   /clone="PorA1393"
FT                   /tissue_type="cerebrum"
FT                   /db_xref="taxon:37012"
FT   CDS             127..1368
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="got1"
FT                   /product="glutamic-oxaloacetic transaminase 1, soluble"
FT                   /note="glutamic-oxaloacetic transaminase 1, soluble
FT                   (aspartate aminotransferase 1)"
FT                   /db_xref="GOA:A5A6K8"
FT                   /db_xref="InterPro:IPR015421"
FT                   /db_xref="UniProtKB/Swiss-Prot:A5A6K8"
FT                   /protein_id="BAF62381.1"
FT                   /translation="MAPPSVFAEVPQAQPVLVFKLTADFREDPDPRKVNLGVGAYRTDD
FT                   CHPWVLPVVKKVEQKIANDNSLNHEYLPILGLAEFRSCASRLALGDDSPALKEKRVGGV
FT                   QSLGGTGALRIGADFLARWYNGTNNKNTPVYVSSPTWENHNAVFSAAGFKDIRSYRYWD
FT                   AEKRGLDLQGFLNDLENAPEFSIVVLHACAHNPTGIDPTPEQWKQIASVMKHRFLFPFF
FT                   DSAYQGFASGNLERDAWAIRYFVSEGFEFFCAQSFSKNFGLYNERVGNLTVVGKEPESI
FT                   LQVLSQMEKIVRITWSNPPAQGARIVASTLSNPELFEEWTGNVKTMADRILSMRSELRA
FT                   RLEALKTPGTWNHITDQIGMFSFTGLNPKQVEYLVNEKHIYLLPSGRINVSGLTTKNLD
FT                   YVATSIHEAVTKIQ"
XX
SQ   Sequence 2064 BP; 526 A; 507 C; 514 G; 517 T; 0 other;
     tttggaggcc gcgggcccgc ccccgccggc taggtgaagg tgagtgtctc ctccagtcgc        60
     aacggccaga cctgaccggc cagctccggg cgtggggtga aatctcttga ttcctagtct       120
     ctcgatatgg cacctccgtc agtctttgcc gaggttccgc aggcccagcc tgtcctggtc       180
     ttcaagctca ctgccgactt cagggaggat ccggaccccc gcaaggtcaa cctgggagtg       240
     ggagcatatc gcacggatga ctgccatccc tgggttttgc cagtagtgaa gaaagtggag       300
     cagaagattg ctaatgacaa tagcctaaat cacgagtatc tgccaatcct gggcctggcc       360
     gagttccgga gctgtgcttc tcgtcttgcc cttggggatg acagcccagc tctcaaggag       420
     aagcgggtag gaggtgtgca atctttgggg ggaacaggtg cacttcgaat tggagctgat       480
     ttcttagcgc gttggtacaa tggaacaaac aacaagaaca cacctgtcta tgtgtcctca       540
     ccaacctggg agaatcacaa tgctgtgttt tccgctgctg gttttaaaga cattcggtcc       600
     tatcgctact gggatgcaga gaagagagga ttggacctcc agggcttcct gaatgatctg       660
     gagaatgctc ctgagttctc catcgttgtc ctccacgcct gtgcacacaa cccaactggg       720
     attgacccaa ctccggagca gtggaagcag attgcttctg tcatgaagca ccggtttctg       780
     ttccccttct ttgactcagc ctatcagggc ttcgcatctg gaaacctgga gagagatgcc       840
     tgggccattc gctattttgt gtctgaaggc ttcgagttct tctgtgccca gtccttctcc       900
     aagaacttcg ggctctacaa tgagagagtc gggaatctga ctgtggttgg aaaagaacct       960
     gagagcatcc tgcaagtcct ttcccagatg gagaagatcg tgcggattac ttggtccaat      1020
     ccccccgccc agggagcacg aattgtggcc agcaccctct ctaaccctga gctctttgag      1080
     gaatggacag gtaatgtgaa gacaatggct gaccggattc tgtccatgag atctgaactc      1140
     agggcacgac tagaagccct caaaacccct gggacctgga accacatcac tgatcaaatt      1200
     ggcatgttca gcttcactgg gttgaacccc aagcaggttg agtatctggt caatgaaaag      1260
     cacatctacc tgctgccaag tggtcgaatc aacgtgagtg gcttaaccac caaaaatcta      1320
     gattacgtgg ccacctccat ccatgaagca gtcaccaaaa tccagtgaag aaacgccacc      1380
     cgtccagtac caccaaagta gttctctgtc atgtgtgttc cctgcctgca caaacctaca      1440
     tgtacatacc atggattaga gacacttgca ggactgaaag gctgctctgg tgaggcagcc      1500
     tctgtttaaa ccggccccac atgaagagaa catcccttga gacgaatttg gagactggga      1560
     ttagagcctt tggaggtcaa agcaaattaa gatttttatt taagaataaa agagtacttt      1620
     gatcatgaga cataggtatc ttgtccctct cactaaaaag gagtgttgcg tgtggcggcc      1680
     acgtgcttct aggtggtgtt tgactctgta caaattctag tcccaaagat caagttgtct      1740
     gaaggagcca aagtgtgaat gtgggtgtca gctgtggcat taaactcatc atctcaaccc      1800
     agagtgtctg gtctccctgc tctttctgca tggttgtgtc cctagtccta agctttggtt      1860
     ctttagggtg actgtgctaa gaaggatatt taatcatgac atgcacggac acatacatat      1920
     ttaactgaaa cagaagtttt accaaacagt atttactcgt gatgtgcgta gtgcattctg      1980
     atatttttga gccattctat tgtgttctac ttcacctaaa aaaataaaat aaaaatgttg      2040
     atcaagaaaa aaaaaaaaaa aaaa                                             2064
//
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