spacer
spacer
EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AB222107; SV 1; linear; mRNA; STD; MAM; 1806 BP.
XX
AC   AB222107;
XX
DT   16-MAY-2007 (Rel. 91, Created)
DT   01-AUG-2007 (Rel. 92, Last updated, Version 2)
XX
DE   Pan troglodytes verus bckdha mRNA for branched chain keto acid
DE   dehydrogenase E1, alpha polypeptide, complete cds, clone: PccB1740.
XX
KW   FLI_CDNA.
XX
OS   Pan troglodytes verus
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Pan.
XX
RN   [1]
RP   1-1806
RA   Hirai M., Sakate R., Hida M., Sugano S., Hayasaka I., Suto Y., Osada N.,
RA   Hashimoto K.;
RT   ;
RL   Submitted (19-JUL-2005) to the EMBL/GenBank/DDBJ databases.
RL   Momoki Hirai, Tokyo Women's Medical University, International Center for
RL   Molecular, Cellular and Immunological Research; 8-1 Kawadacho, Shinjuku-ku,
RL   Tokyo 162-8666, Japan (E-mail:mhirai@imcir.twmu.ac.jp, Tel:81-3-3353-8111,
RL   Fax:81-3-3352-3088)
XX
RN   [2]
RX   DOI; 10.1016/j.gene.2007.04.013
RX   PUBMED; 17574350.
RA   Sakate R., Suto Y., Imanishi T., Tanoue T., Hida M., Hayasaka I.,
RA   Kusuda J., Gojobori T., Hashimoto K., Hirai M.;
RT   "Mapping of chimpanzee full-length cDNAs onto the human genome unveils
RT   large potential divergence of the transcriptome";
RL   Gene 399(1):1-10(2007).
XX
DR   Ensembl-Gn; ENSPTRG00000011025; Pan_troglodytes.
DR   Ensembl-Tr; ENSPTRT00000056056; Pan_troglodytes.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1806
FT                   /organism="Pan troglodytes verus"
FT                   /sub_species="verus"
FT                   /mol_type="mRNA"
FT                   /sex="female"
FT                   /dev_stage="adult"
FT                   /clone_lib="full-length enriched chimpanzee cDNA library"
FT                   /clone="PccB1740"
FT                   /tissue_type="cerebellum"
FT                   /db_xref="taxon:37012"
FT   CDS             15..1352
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="bckdha"
FT                   /product="branched chain keto acid dehydrogenase E1, alpha
FT                   polypeptide"
FT                   /db_xref="GOA:A5A6H9"
FT                   /db_xref="InterPro:IPR001017"
FT                   /db_xref="UniProtKB/Swiss-Prot:A5A6H9"
FT                   /protein_id="BAF62352.1"
FT                   /translation="MAVAIAAARVWRLNRGLSQAALLLLRRPGARGLARSHPRRQQQQF
FT                   SSLDDKPQFPGASAEFIDKLEFIQPNVISGIPIYRVMDRQGQIINPSEDPHLPKEKVLK
FT                   LYKSMTLLNTMDRILYESQRQGRISFYMTNYGEEGTHVGSAAALDNTDLVFGQYREAGV
FT                   LMYRDYPLELFMAQCYGNISDLGKGRQMPVHYGCKERHFVTISSPLATQIPQAVGAAYA
FT                   AKRANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAISTPTSEQYRG
FT                   DGIAARGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTYRIGHHSTSD
FT                   DSSAYRSVDEVNYWDKQDHPVSRLRHYLLSQGWWDEEQEKAWRKQSRKKVMEAFEQAER
FT                   KPKPNPNLLFSDVYQEMPAQLRKQQESLARHLQTYGEHYPLDHFDK"
XX
SQ   Sequence 1806 BP; 429 A; 548 C; 512 G; 317 T; 0 other;
     ggttgttagc caagatggcg gtagcgatcg ctgcagcgag ggtctggcgg ctaaaccgtg        60
     gtctgagcca ggctgccctc ctgctgctgc ggcggcctgg ggctcgggga ctggctagat       120
     ctcacccccg caggcagcag cagcagtttt catctctgga tgacaagccc cagttcccag       180
     gggcctcggc ggagtttata gataagttgg aattcatcca gcccaacgtc atctctggaa       240
     tccccatcta ccgcgtcatg gaccggcaag gccagatcat caaccccagc gaggaccccc       300
     acctgccgaa ggagaaggtg ctgaagctct acaagagcat gacactgctt aacaccatgg       360
     accgcatcct ctatgagtct cagcggcagg gccggatctc cttctacatg accaactatg       420
     gtgaggaggg cacgcacgtg gggagtgccg ccgccctgga caacacggac ctggtgtttg       480
     gccagtaccg ggaggcaggt gtgctgatgt atcgggacta ccccctggaa ctattcatgg       540
     cccagtgcta tggcaacatc agtgacttgg gcaaggggcg ccagatgccc gtccactacg       600
     gctgcaagga acgccacttc gtcactatct cctctccact ggccacgcag atccctcagg       660
     cggtgggggc ggcgtacgca gccaagcggg ccaatgccaa cagggtcgtc atctgttact       720
     tcggcgaggg ggcagccagt gagggggacg cccatgccgg cttcaacttc gctgccacac       780
     ttgagtgccc catcatcttc ttctgccgga acaatggcta cgccatctcc acgcccacct       840
     ccgagcagta tcgcggtgat ggcattgcag cacgaggccc cgggtatggc atcatgtcaa       900
     tccgcgtgga tggtaatgat gtgtttgccg tatacaacgc cacaaaggag gcccgacggc       960
     gggctgtggc agagaaccag cccttcctca ttgaggccat gacctacagg atcgggcacc      1020
     acagcaccag tgacgacagt tcagcgtacc gctcggtgga tgaggtcaat tactgggata      1080
     aacaggacca ccccgtctcc cggctgcggc attatctgct gagccaaggc tggtgggatg      1140
     aggagcagga gaaggcctgg aggaagcagt cccgcaagaa ggtgatggag gcctttgagc      1200
     aggccgagcg gaagcccaaa cccaacccca acctgctctt ctcagacgtg tatcaggaga      1260
     tgcccgccca gctccgcaag cagcaggagt ctctggcccg ccacctgcag acctacgggg      1320
     agcactaccc actggatcac ttcgataagt gagacctgct cagcccaccc ccacccgtcc      1380
     tcagctaccc cgagaggtag ccccactcta aggggagcag ggggacctga cagcacacca      1440
     ctgtcttccc cagtcagctc cctctaaaat actcagcggc cagggcggct gccactcttc      1500
     acccctgctc ctcccggctg ttacattgtc aggggacagc atctgcagca gttgctgagg      1560
     ctccgtcagc cccctcttca cctgttgtta cagtgccttc tcccaggggc tgggtgaggg      1620
     cacatccagg actagaagcc cctctgggca tggggtggac atggcaggtc agcctgtgga      1680
     acttgcgcag gtgcaagtgg ccagcagagg tcacgaataa actgcatctc tgcgcctggc      1740
     aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa      1800
     aaaaaa                                                                 1806
//
spacer
spacer