EBI Dbfetch

ID   AB220989; SV 1; linear; genomic DNA; STD; VRL; 1467 BP.
XX
AC   AB220989;
XX
DT   16-JUL-2005 (Rel. 84, Created)
DT   15-FEB-2009 (Rel. 99, Last updated, Version 3)
XX
DE   Human herpesvirus 1 UL42 gene for DNA polymerase processivity factor,
DE   complete cds, strain: KBS-C-1783.
XX
KW   .
XX
OS   Human herpesvirus 1 (Herpes simplex virus type 1)
OC   Viruses; dsDNA viruses, no RNA stage; Herpesvirales; Herpesviridae;
OC   Alphaherpesvirinae; Simplexvirus.
XX
RN   [1]
RP   1-1467
RA   Suzuki M., Kobayashi N., Takahashi K., Honda R., Hirooka J., Okuda T.,
RA   Yoshida Y., Hama Y., Kawana T., Shiraki K.;
RT   ;
RL   Submitted (12-JUL-2005) to the EMBL/GenBank/DDBJ databases.
RL   Contact:Kimiyasu Shiraki Toyama Medical and Pharmaceutical Univeresity,
RL   Department of Virology; 2630 Sugitani, Toyama, Toyama 930-0194, Japan
XX
RN   [2]
RA   Suzuki M., Kobayashi N., Takahashi K., Honda R., Hirooka J., Okuda T.,
RA   Yoshida Y., Hama Y., Kawana T., Shiraki K.;
RT   "Analysis of genetic stability of essential genes in clinically isolated
RT   Herpes Simplex Virus 1";
RL   Unpublished.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1467
FT                   /organism="Human herpesvirus 1"
FT                   /strain="KBS-C-1783"
FT                   /mol_type="genomic DNA"
FT                   /country="Japan:Toyama"
FT                   /isolation_source="human genital lesion (cervix)"
FT                   /note="laboratory host: Vero cell, human embryonic lung
FT                   cell"
FT                   /db_xref="taxon:10298"
FT   CDS             1..1467
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="UL42"
FT                   /product="DNA polymerase processivity factor"
FT                   /function="replication-associated protein"
FT                   /db_xref="GOA:Q4H1G9"
FT                   /db_xref="InterPro:IPR003202"
FT                   /db_xref="UniProtKB/TrEMBL:Q4H1G9"
FT                   /experiment="experimental evidence, no additional details
FT                   recorded"
FT                   /protein_id="BAE07193.1"
FT                   /translation="MTDSPGGMAPASPVEDASDASLGQPEEGAPCQVVLQGAELNGILQ
FT                   AFAPLRTSLLDSLLVMGDRGILIHNTIFGEQVFLPLEHSQFSRYRWRGPTAAFLSLVDQ
FT                   KRSLLSVFRANQYPDLRRVELAITGQAPFRTLVQRIWTTTSDGEAVELASETLMKRELT
FT                   SFVVLVPQGTPDVQLRLTRPQLTKVLNATGADSATPTTFELGVNGKFSVFTTSTCVTFA
FT                   AREEGVSSSTSTQVQILSNALTKAGQAAANAKTVYGENTHRTFSVVVDDCSMRAVLRRL
FT                   QVAGGTLKFFLTTPVPSLCVTATGPNAVSAVFLLKPQKICLDWLGHSQGSPSAGSSASR
FT                   ASGSEPTDSQDSASDAVSHGDPEDLDGAARAGEAGASYACPMPSSTTRVTPTTKRGRAG
FT                   GEDARADTALKKPKTGSPTAPPPADPVPLDTEDDSDAADGTAARPAAPDARSGSRYACY
FT                   FRDLPTGEASPGAFSAFRGGPQTPYGFGFP"
XX
SQ   Sequence 1467 BP; 242 A; 511 C; 473 G; 241 T; 0 other;
     atgacggatt cccctggcgg tatggccccc gcctcccccg tggaggacgc gtcggacgcg        60
     tccctcgggc agccggagga gggggcgccc tgccaggtgg tcctgcaggg cgccgaactt       120
     aatggaatcc tacaggcgtt tgccccgctg cgcacgagcc ttctggactc gcttctggtt       180
     atgggcgacc ggggcatcct tatccataac acgatctttg gggagcaggt gttcctgccc       240
     ctggaacact cgcagttcag tcggtatcgc tggcgcggac ccacggcggc gttcctgtct       300
     ctcgtggacc agaagcgctc cctcctgagc gtgtttcgcg ccaaccagta cccggaccta       360
     cgtcgggtgg agttggcgat cacgggccag gccccgtttc gcacgctggt tcagcgcata       420
     tggacgacga cgtccgacgg cgaggccgtt gagctagcca gcgagacgct gatgaagcgc       480
     gaactgacga gctttgtggt gctggttccc cagggaaccc ccgacgttca gttgcgcctg       540
     acgaggccgc agctcaccaa ggtccttaac gcgaccgggg ccgatagtgc cacgcccacc       600
     acgttcgagc tcggggttaa cggcaaattt tccgtgttca ccacgagtac ctgcgtcaca       660
     tttgctgccc gcgaggaggg cgtgtcgtcc agcaccagca cccaggtcca gatcctgtcc       720
     aacgcgctca ccaaggcggg ccaggcggcc gccaacgcca agacggtgta cggggaaaat       780
     acccatcgca ccttctctgt ggtcgtcgac gattgcagca tgcgggcggt gctccggcga       840
     ctgcaggtcg ccgggggcac cctcaagttc ttcctcacga cccccgtccc cagtctgtgc       900
     gtcaccgcca ccggtcccaa cgcggtatcg gcggtatttc tcctgaaacc ccagaagatt       960
     tgcctggact ggctgggtca tagccagggg tctccttcag ccgggagctc ggcctcccgg      1020
     gcctctggga gcgagccaac agacagccag gactccgcgt cggacgcggt cagccacggc      1080
     gatccggaag acctcgatgg cgctgcccgg gcgggagagg cgggggcctc gtacgcctgt      1140
     ccgatgccgt cgtcgaccac gcgggtcact cccacgacca agcgggggcg cgcggggggc      1200
     gaggatgcgc gcgcggacac ggccctaaag aaacctaaga cggggtcgcc caccgcaccc      1260
     ccgcccgcag atccagtccc cctggacacg gaggacgact ccgatgcggc ggacgggacg      1320
     gcggcccgtc ccgccgctcc agacgcccgg agcggaagcc gttacgcgtg ttactttcgc      1380
     gacctcccga ccggagaagc aagccccggc gccttctccg ccttccgggg gggcccccaa      1440
     accccgtatg gttttggatt cccctga                                          1467
//