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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AB188273; SV 1; linear; mRNA; STD; MAM; 1629 BP.
XX
AC   AB188273;
XX
DT   01-DEC-2004 (Rel. 82, Created)
DT   01-AUG-2007 (Rel. 92, Last updated, Version 4)
XX
DE   Pan troglodytes verus aldoc mRNA for fructose-bisphosphate aldolase C,
DE   complete cds.
XX
KW   .
XX
OS   Pan troglodytes verus
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Pan.
XX
RN   [1]
RP   1-1629
RA   Hirai M., Sakate R., Hida M., Sugano S., Hayasaka I., Suto Y., Osada N.,
RA   Hashimoto K.;
RT   ;
RL   Submitted (18-AUG-2004) to the EMBL/GenBank/DDBJ databases.
RL   Momoki Hirai, Tokyo Women's Medical University, International Center for
RL   Molecular, Cellular and Immunological Research; 8-1 Kawadacho, Shinjuku-ku,
RL   Tokyo 162-8666, Japan (E-mail:mhirai@imcir.twmu.ac.jp, Tel:81-3-3353-8111,
RL   Fax:81-3-3352-3088)
XX
RN   [2]
RX   DOI; 10.1534/genetics.104.029231
RX   PUBMED; 15677748.
RA   Osada N., Wu C.I.;
RT   "Inferring the mode of speciation from genomic data: a study of the great
RT   apes";
RL   Genetics 169(1):259-264(2005).
XX
RN   [3]
RX   DOI; 10.1016/j.gene.2007.04.013
RX   PUBMED; 17574350.
RA   Sakate R., Suto Y., Imanishi T., Tanoue T., Hida M., Hayasaka I.,
RA   Kusuda J., Gojobori T., Hashimoto K., Hirai M.;
RT   "Mapping of chimpanzee full-length cDNAs onto the human genome unveils
RT   large potential divergence of the transcriptome";
RL   Gene 399(1):1-10(2007).
XX
DR   Ensembl-Gn; ENSPTRG00000008923; Pan_troglodytes.
DR   Ensembl-Tr; ENSPTRT00000016458; Pan_troglodytes.
DR   Ensembl-Tr; ENSPTRT00000065468; Pan_troglodytes.
DR   Ensembl-Tr; ENSPTRT00000067105; Pan_troglodytes.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1629
FT                   /organism="Pan troglodytes verus"
FT                   /sub_species="verus"
FT                   /mol_type="mRNA"
FT                   /sex="female"
FT                   /dev_stage="adult"
FT                   /clone_lib="female adult cerebellum, full-length enriched
FT                   chimpanzee cDNA library"
FT                   /clone="PccB0730"
FT                   /tissue_type="cerebellum"
FT                   /db_xref="taxon:37012"
FT   CDS             109..1203
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="aldoc"
FT                   /product="fructose-bisphosphate aldolase C"
FT                   /note="aldolase C, fructose-bisphosphate"
FT                   /db_xref="GOA:Q5R1X4"
FT                   /db_xref="InterPro:IPR000741"
FT                   /db_xref="InterPro:IPR013785"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q5R1X4"
FT                   /protein_id="BAD74024.1"
FT                   /translation="MPHSYPALSAEQKKELSDIALRIVAPGKGILAADESVGSMAKRLS
FT                   QIGVENTEENRRLYRQVLFSADDRVKKCIGGVIFFHETLYQKDDNGVPFIRTILDKGIV
FT                   VGIKVDKGVVPLAGTDGETTTQGLDGLSERCAQYKKDGADFAKWRCVLKISERTPSALA
FT                   ILENANVLARYASICQQNGIVPIVEPEILPDGDHDLKRCQYVTEKVLAAVYKALSDHHV
FT                   YLEGTLLKPNMVTPGHACPIKYTPEEIAMATVTALRRTVPPAVPGVTFLSGGQSEEEAS
FT                   FNLNAINRCPLPRPWALTFSYGRALQASALNAWRGQRDNAEAATEEFIKRAEVNGLAAQ
FT                   GKYEGSGEDGGAAAQSLYIANHAY"
XX
SQ   Sequence 1629 BP; 383 A; 453 C; 436 G; 357 T; 0 other;
     attttaccag agggagccag ggctgcagcc tcaactgttt gcggatcaga acccgagctg        60
     tgcttgtggc tgcggctgct aactggctgc gcacagggag ctgtcaccat gcctcactcg       120
     tacccagccc tttctgctga gcagaagaag gagttgtctg acattgccct gcggattgta       180
     gccccgggca aaggcattct ggctgcggat gagtctgtag gcagcatggc caagcggctg       240
     agccaaattg gggtggaaaa cacagaggag aaccgccggc tataccgcca ggtcctgttc       300
     agtgctgatg accgtgtgaa aaagtgcatt ggaggcgtca ttttcttcca tgagaccctc       360
     taccagaaag atgataatgg tgttcccttc atccgaacca tcctggataa gggcatcgtc       420
     gtgggcatca aggttgacaa gggtgtggtg cctctagctg ggactgatgg agaaaccacc       480
     actcaagggc tggatgggct ctcagaacgc tgtgcccaat acaagaagga tggtgctgac       540
     tttgccaagt ggcgctgtgt gctgaaaatc agtgagcgca caccctctgc acttgccatt       600
     ctggagaacg ccaacgtgct ggcccgttat gccagtatct gccagcagaa tggcattgtg       660
     cctattgtgg aacctgaaat attgcctgat ggagaccacg acctcaaacg ttgtcagtat       720
     gttacagaga aggtcttggc tgctgtgtac aaggccctga gtgaccatca tgtatacctg       780
     gaggggaccc tgctcaagcc caacatggtg accccgggcc atgcctgtcc catcaagtat       840
     accccagagg agattgccat ggcaactgtc actgccctgc gtcgcactgt gcccccagct       900
     gtcccaggag tgaccttcct gtctgggggt cagagcgaag aagaggcatc attcaacctc       960
     aatgccatca accgctgccc ccttccccga ccctgggcgc ttaccttctc ctatgggcgt      1020
     gccctgcaag cctctgcact caatgcctgg cgagggcaac gggacaatgc tgaggctgcc      1080
     actgaggagt tcatcaagcg ggctgaggtg aatgggcttg cagcccaggg caagtatgaa      1140
     ggcagtggag aagatggtgg agcagcagca cagtcactct acattgccaa ccatgcctac      1200
     tgagtatcca ctccatacca cagcccttgg cccagccatc tgcacccact tttgcttgta      1260
     gttatggcca gggccaaata gctatgcaga gcagagatgc cttcacctgg caccaacttg      1320
     tcttcctttc tctcctccct tcccctctct cattgctgca cctgggacca taggatggga      1380
     ggatagggag cccctcatga ctgagggcag aagaaattgc tagaagtcag aacaggatgg      1440
     ctgggtctcc ccctacctct tccagctccc ataattttcc catgatgagg tagcttctcc      1500
     ctgggctctc cttcttgcct gccctgtctc ctgggatcag agggtagtac agaagccctg      1560
     actcatgcct tgagtacata tcatacggca aataaatggt agcaaaacaa aaaaaaaaaa      1620
     aaaaaaaaa                                                              1629
//
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