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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AB179775; SV 1; linear; mRNA; STD; INV; 713 BP.
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AC   AB179775;
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DT   19-MAY-2004 (Rel. 79, Created)
DT   12-DEC-2006 (Rel. 90, Last updated, Version 2)
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DE   Crassostrea gigas lysoz mRNA for lysozyme, complete cds.
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KW   .
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OS   Crassostrea gigas (Pacific oyster)
OC   Eukaryota; Metazoa; Mollusca; Bivalvia; Pteriomorphia; Ostreoida;
OC   Ostreoidea; Ostreidae; Crassostrea.
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RN   [1]
RP   1-713
RA   Takahashi K.G., Nakamura A., Matsumoto T.;
RT   ;
RL   Submitted (17-MAY-2004) to the EMBL/GenBank/DDBJ databases.
RL   Keisuke G Takahashi, tohoku university, graduate school of agricultural
RL   science; tsutsumidori-amamiyamachi 1-1, sendai, aoba-ku, miyagi 981-8555,
RL   Japan (E-mail:waradica@bios.tohoku.ac.jp, Tel:81-22-717-8726,
RL   Fax:81-22-717-8727)
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RN   [2]
RX   DOI; 10.1016/j.cbpb.2006.08.003
RX   PUBMED; 16996284.
RA   Matsumoto T., Nakamura A.M., Takahashi K.G.;
RT   "Cloning of cDNAs and hybridization analysis of lysozymes from two oyster
RT   species, Crassostrea gigas and Ostrea edulis";
RL   Comp. Biochem. Physiol. B, Biochem. Mol. Biol. 145(3-4):325-330(2006).
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FH   Key             Location/Qualifiers
FH
FT   source          1..713
FT                   /organism="Crassostrea gigas"
FT                   /mol_type="mRNA"
FT                   /country="Japan:Miyagi"
FT                   /cell_type="hemocyte"
FT                   /db_xref="taxon:29159"
FT   CDS             129..542
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="lysoz"
FT                   /product="lysozyme"
FT                   /EC_number="3.2.1.17"
FT                   /db_xref="GOA:Q6L6Q6"
FT                   /db_xref="InterPro:IPR008597"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q6L6Q6"
FT                   /protein_id="BAD19059.1"
FT                   /translation="MQRLLGSIVILATVFTFCEATISSACLRCICNVESGCRPIGCHYD
FT                   VYSYSCGYFQIKENYWEDCGKPGTSFKACANDYTCASNCVRAYMKRYIGSSGCPANCES
FT                   YARIHNGGPRGCRHPSTLRYWEKVHQQGCNVNS"
XX
SQ   Sequence 713 BP; 237 A; 128 C; 154 G; 194 T; 0 other;
     cgtattgtta aaacacgtgc tcaatatcac atgccattaa attagggaaa tgagatgggt        60
     ctttccttca tacatatata aaacagggga tttgcaatct gaagaactgt ctaaagcacc       120
     aagtaatcat gcagcgccta cttggatcca tcgttattct agcgactgtg ttcacgttct       180
     gtgaagctac catatcttcg gcatgtctgc gttgtatttg taacgtggaa tcgggatgca       240
     gacccattgg ttgtcactat gacgtgtact catactcgtg cggctacttc caaatcaagg       300
     agaattactg ggaagattgt ggaaaacctg gaacaagttt taaggcgtgt gctaacgact       360
     acacgtgtgc atccaactgt gtcagagcct acatgaagcg ttatattgga agcagtggtt       420
     gtccagcaaa ctgtgaaagt tatgcacgaa tccacaatgg tggcccgcga ggatgtcgac       480
     atccatccac tctcagatac tgggagaagg tgcatcagca aggttgcaat gtgaacagtt       540
     aattgtatag ccaatatgtt tgaagtgtaa actgtatagg caaaataatt aaaaatatgc       600
     aattcaaaag aacaaaaaac ttgaaaggtc gaatgcatag ttttattgtc cattcaataa       660
     agttaaagaa gaattattat catgcgtata catagagtaa aaaaaaaaaa aaa              713
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