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EBI DbfetchID AB122082; SV 1; linear; genomic DNA; STD; PLN; 5967 BP. XX AC AB122082; XX DT 02-APR-2004 (Rel. 79, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 3) XX DE Oryza sativa Japonica Group DAHPS2 gene for 3-deoxy-D-arabino DE heptulosonate-7-phosphate synthase, exon 1-5, complete cds. XX KW . XX OS Oryza sativa Japonica Group OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP clade; OC Ehrhartoideae; Oryzeae; Oryza. XX RN [1] RP 1-5967 RA Mase K., Nishikubo N., Satou K., Nakano Y., Kajita S., Katayama Y.; RT ; RL Submitted (10-OCT-2003) to the EMBL/GenBank/DDBJ databases. RL Contact:Kohei Mase Tokyo University of Agriculture and Technology, Graduate RL school of Bio-Applications and Systems Engineering; Nakamathi 2-24-16, RL Koganei, Tokyo 184-8588, Japan XX RN [2] RA Mase K., Nishikubo N., Satou K., Nakano Y., Kajita S., Katayama Y.; RT "The gene encoding 3-deoxy-D-arabino heptulosonate-7-phosphate synthase RT expressed in rice stem"; RL Unpublished. XX FH Key Location/Qualifiers FH FT source 1..5967 FT /organism="Oryza sativa Japonica Group" FT /cultivar="Fujiminori" FT /mol_type="genomic DNA" FT /db_xref="taxon:39947" FT exon 2348..2960 FT /gene="DAHPS2" FT /number=1 FT 5'UTR 2348..2423 FT CDS join(2424..2960,3051..3329,4335..4614,4721..4966, FT 5385..5662) FT /codon_start=1 FT /transl_table=1 FT /gene="DAHPS2" FT /product="3-deoxy-D-arabino heptulosonate-7-phosphate FT synthase" FT /db_xref="GOA:Q75W16" FT /db_xref="InterPro:IPR002480" FT /db_xref="UniProtKB/Swiss-Prot:Q75W16" FT /protein_id="BAD14926.1" FT /translation="MALATNSAAVSGGAAAAASSAPQPRLAATFLPMRRRTVSAVHAAD FT PAKSNGPVQAAAKASSPSTVAAPEKKPVGLGKWTVDSWKAKKALQLPEYPSQEELDSVL FT KTIETFPPVVFAGEARHLEERLADAAMGRAFVLQGGDCAESFKEFNANNIRDTFRILLQ FT MGAVLMFGGQMPVVKVVGRMAGQFAKPRSDSFEERDGVKLPSYRGDNINGDTFDEKSRV FT PDPQRMIRAYAQSVATLNLLRAFATGGYAAMQRVTQWNLDFMDHSEQGDRRYRELAHRV FT DEALGFMTAAGLTVDHPIMTTTDFWTSHECLLLPYEQSLTREDSTSGLFYDCSAHMLWV FT GERTRQLDGAHVEFLRGVANPLGIKVSDKMNPRDLVKLIEILNPSNKPGRITIITRMGA FT ENMRVKLPHLIRAVRNSGQIVTWITDPMHGNTIKAPCGLKTRPFDSILAEVRAFFDVHD FT QEGSHPGGIHLEMTGQNVTECIGGSRTVTFDDLSDRYHTHCDPRLNASQSLELAFIIAE FT RLRRRRMRSGVNSNLPLPPLAF" FT intron 2961..3050 FT /number=1 FT exon 3051..3329 FT /gene="DAHPS2" FT /number=2 FT intron 3330..4334 FT /number=2 FT exon 4335..4614 FT /gene="DAHPS2" FT /number=3 FT intron 4615..4702 FT /number=3 FT exon 4721..4966 FT /gene="DAHPS2" FT /number=4 FT intron 4967..5384 FT /number=4 FT exon 5385..5917 FT /gene="DAHPS2" FT /number=5 FT 3'UTR 5663..5917 XX SQ Sequence 5967 BP; 1609 A; 1385 C; 1352 G; 1621 T; 0 other; ctagattcgc tttttattta tggagggagt acgtaacaca ctaattaatt aaattgctcc 60 cttttttaga caaatgatat taccacgtgt tatgcctgat gttatacgga taacacacat 120 tttcacattg acatacgcta tttttatgat attgtttgaa ccttaattag taggcagaat 180 tatattcctg tgttttataa cagttcgcta aatggtagga gcgtcactag catatgaatt 240 atgatgaccc aggagagaaa aaaagaatag tgaatggata actttggcca caaaccacaa 300 ctagtaaata tattaactta acaagctttc tattgaattg attgaaaaat gtgatcaaat 360 taacctcttg tcttgaactg attagtaaga actaaataag ctttatgttg aactagttca 420 tgcatgcaac tcagttagcc tcgcttctct actcgcagga atgtgaaaaa aaccccagaa 480 ggaatagaaa aaaaaagaca ggattctaac ggaaacaaaa gtgtaaaata aagaattgta 540 aaacacataa acgaccgttt gattggaccg tagaaaaatc acaagaattc gagtagagat 600 aaagatttaa atgatatttt ttccatgagg ttctacctta tgttaaattt cctccaaaac 660 ttccatggaa agaggcattt cataggaact ttataggatt ctataggatt cattcttttg 720 atttaaaggc tacagagaaa aaaaatttat gaatgaaata ctctaaaatt cttacgaatt 780 tcctttgaat ccaaaggggg cctaatttct tcaactactt ttctatgtca actgaccata 840 accatccttt atttaatttc acatctcttc ttgatctctg taaaagaaat ttcagaacta 900 cttatatttg gagacaagta tcttcacctc ctcacaatga aagaaagaaa agagaagaac 960 atctggtccc aattgtgtca catggggggt atcttcgtgg tgccacgtgc gtgtggtgcc 1020 gcacacaaat caccccaaaa acattgcatt gcctggttcg taaaatcgat ttcgacctaa 1080 tttaaatcga gcatcaagta acatggcttc ctgtcataag acgacgcgga aatatgcgaa 1140 ctagacgtcg tcgaacgtac gatactgcag aatattcgta cgaaatcgga ccaaattgtt 1200 ttaatttttc acgcatgtat gtatggtgtc aaaatttgaa agtgaatgcg aaacgaaacc 1260 atgtggccga gcagggagcc acacaaagag ccacataatt ggccctgggt ccggaatccc 1320 ccggggccat tcgtgccacc aactaacccc acccagacag gtgactttca cgagccggtc 1380 gtctcgatgg caggtggggg ccaacctgcc gggcacggga agcggcgggg cccacctgtc 1440 agttgtggat agatgttgac aagtggcgct gtactgtacg ccgtacgata tttttagctg 1500 ttccaactga gccgagccga gccaagccaa aattgtactg ggaacatgat tattatagca 1560 ggctctgtta atgtgttttt ttgacatcaa atcattatta cattcatcct aaaatacaac 1620 aacctagcgc cgaattatac aaaacctatt agtatgaatc tgattgtaca tattcgtgat 1680 actaatttat gccaaatcta atacttgatt actactccat ccgtcccaca aaatatgtcg 1740 ttttactcat ttgtgattgt cccaaaaagt gatcgtttag catttgaagc agaaaagtag 1800 acccatatgg tataaggtca tcttatactg ctatcaattg tttttgctct atgggacttt 1860 atgccccaaa cgaggttgca ggttggtggt gcagtggaga ggagaggagg ccggtgaaat 1920 tacttatagt acctgcaagt actaaattat aattacttat agtacctcca aaactaattt 1980 agcagcactt tcacaggatg accagaattt tgggacgagg agtatatttt gtaacggagc 2040 ggctcaagct ttagcagatc aggcggcaag ccgagccgag ccgagccaag gtcaagacct 2100 accccaccga ccctgcgtca cgggcccaca ttgtcataca cgccacctaa cccctaaagt 2160 atcttttcca agtcaggtca tatagatacg aagaaaaact acgaaactac ccttccccac 2220 caccccttct tcctccctcc tctcacaccc tcgtcgccgc caaccaccat ccaacccatc 2280 caccaacccc tcctcctccc cttcgccgtc gaccccgcct ataaataccc ctcaccccac 2340 ccacctccac cttcagagga gccccgccta ccgccgccct cacgcctcct cccacctacc 2400 tcacctcgaa gctgacgtca gcaatggcgc tcgccaccaa ctccgccgct gtttccggtg 2460 gcgctgcggc cgcggcgtcg tcggcgcccc agccgcggct cgccgccacg ttcctcccga 2520 tgaggaggcg aaccgtctcg gcggtccacg cggccgaccc ggcgaagagc aacgggcccg 2580 tgcaggccgc ggcgaaggcc tcgtccccgt cgacggtggc ggcgccggag aagaagccgg 2640 tggggttggg gaagtggacg gtggatagct ggaaggcgaa gaaggcgctg cagctgcccg 2700 agtacccgag ccaggaggag ctcgactccg tgctcaagac gatcgagacg ttcccgcccg 2760 tggtgttcgc cggggaggcg cgccacctcg aggagcgcct cgccgacgcc gccatgggcc 2820 gcgccttcgt cctccagggc ggcgactgcg ccgagagctt caaggagttc aacgccaaca 2880 acatccgtga caccttccgc atcctgctcc agatgggcgc cgtcctcatg ttcggcggcc 2940 agatgcccgt cgtcaaggta cccaaaatcc aaaccccaaa acgagctcat ccttcacgcg 3000 attcgcgaga tctgatcccg atctgctcca aattttgtgc gcgagtttag gtcgggagga 3060 tggctggcca gttcgccaag ccgaggtctg attcgttcga ggagagggac ggggttaagc 3120 tgccgagtta caggggagac aacatcaatg gcgacacctt cgacgagaag agccgcgtgc 3180 cggacccgca gcggatgatc cgcgcgtacg cgcagtcggt ggcaacgctc aacctgctcc 3240 gcgccttcgc cacgggaggg tacgccgcca tgcagcgcgt cacgcagtgg aacctcgatt 3300 tcatggatca cagcgaacaa ggagacaggt gagaaattca tttctctccc cttttttttc 3360 atacgatttt ttagcacttt ttgttgcgga agttgttaaa gtcgctttcg atttaaaaga 3420 tatcagtgtt gaattgcttc cacatatctc gttatcatga taaggctaga gctgcttata 3480 ggttgctggt gataacacgg tttcacccct tttggaatct gtgtgaccgt gtaagtaatg 3540 ggtggtgaac atgttcttga aagtatgaac ccagtcatct gctcttgaaa atggtctgat 3600 attctaattt gcagcttgaa taagtaaatg gaaacatttt aggtggtcgc agctcgtcaa 3660 tgtttaataa aaatcacgtg gtagttctga ttccatcaat cagtagttgg tgagttgtcc 3720 tgttagaagc tttcactttc tgtcccttcc tttcgaggaa actgctaacg ggacatcatt 3780 gtcctttgca tccaactttc tgaataattg ttaggaagct gcccgttttt gctattttca 3840 tggtatggaa taccatggaa ttgttggtta aaaaggcatg caattatctg aggcgtaccc 3900 atttcagaat acataattaa ctaaactacc cgtccatgaa atttatcgtc ggtcgtgctc 3960 taatttagca tctgtaacct tctttggatt tataatgttg acttatgcag tgttaacgta 4020 tttatatttt cttcagacat gcgtccaata aagattataa agaatttatt gttagaatgt 4080 tgttttgact ttttctgtaa aagatggtgt tccgacaaaa tacaaagttg ccatcataat 4140 aagacattga aatgccattt tgttggtggt atttgcaaat tgcaaataag agcagctcat 4200 tggtatactg cataagtgct gttggtatat tatcgatttg ccgctacata tgcaattgtt 4260 tacgttacag aataaaatat gcttgtaacg actgaatcga gaggttatcc aatgattgtc 4320 tctattttgt gtataggtac cgtgaattgg cacaccgggt ggatgaggca cttggcttca 4380 tgactgcagc agggctaaca gtcgaccatc cgataatgac aacaactgac ttctggacat 4440 cccatgagtg cctcctctta ccatatgagc agtctcttac acgtgaggat tccaccagtg 4500 gcctcttcta tgactgctca gcccacatgc tatgggttgg tgagcgcact cgccagctcg 4560 atggagctca tgttgaattt ctccgtggtg ttgccaaccc tcttggcata aaggtcagca 4620 ttgagtttat tttcataaag ttatgtgaaa tcctaatgtt gtttgcagtg ccttgtggat 4680 gttgacattt caaactgaca ttgaccctgt gtaatgtagg tgagtgacaa aatgaacccc 4740 cgtgacttgg tgaagctcat tgagattttg aacccatcaa acaagcctgg aaggataacc 4800 ataattacaa gaatgggggc agagaacatg agggtgaaat tgcctcatct tatccgtgct 4860 gtccgcaact ctggacagat tgtcacatgg attactgatc ccatgcatgg aaacaccatc 4920 aaggctccat gtggtctgaa gactcgtcca ttcgattcca ttctggtgag tatttttctg 4980 ctacagcatt ccatatttgc tagtatcctt tcctagtatg atgcaacaat ccggtcaatc 5040 tcacataagg aattaccctc attccccaac ttcgactgca cagttattta acagtactga 5100 aaattgagtg ataactcggt atgctatatg cataaagttc ctgtctagtg cattggccat 5160 ttgtatccca agttcccatc tagtgcatta gagtatctgt ttatgtcagt gagaatgtga 5220 cacttttggg catatgctat atcagcaaaa atcctaggcg tttctaattc tatggtatga 5280 gaagaaaagt gtaccactgc tgaaacggaa ctgtaacctt tgttaaacta gcgtcatttt 5340 ggactattgg tcaaataaac atgaacattg ctgtgtttca caggctgaag tacgtgcgtt 5400 cttcgatgtc catgatcaag aaggtagcca cccaggaggt atccacctgg aaatgactgg 5460 gcagaacgtg actgaatgca tcggtggatc aaggaccgtc accttcgatg acctgagcga 5520 ccgctaccac acccactgtg acccaaggct gaacgcgtcg caatccctgg agctcgcctt 5580 catcatcgcc gagagactga ggcggaggag gatgcggtcc ggggtcaaca gcaacctgcc 5640 attgccccca ttggctttct aaactgctga aacgggggaa gggaaaagaa actgggagga 5700 gggggtagaa tagtttcaac tcgccggcgg tgatatctgc atgtgttctg tcaaatgttt 5760 gtatggtggt tgttgagtgt tcttggcact ataggcagtt gtcgaggata tggtagcata 5820 tatactcgcc gtgttgtaat aagttttttg atggatgtgt tctgatgaat ttttaagggg 5880 gcctcagctc tgtgctgttt ggccttgggg acaggagaaa ataaagctag atggtttgct 5940 tggttacttt tgtactcgta gatacga 5967 // |
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