 |
|
EBI DbfetchID AB122057; SV 1; linear; mRNA; STD; PLN; 2059 BP. XX AC AB122057; XX DT 02-APR-2004 (Rel. 79, Created) DT 15-FEB-2008 (Rel. 94, Last updated, Version 4) XX DE Oryza sativa Japonica Group DAHPS1 mRNA for 3-deoxy-D-arabino DE heptulosonate-7-phosphate synthase, complete cds. XX KW . XX OS Oryza sativa Japonica Group OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP clade; OC Ehrhartoideae; Oryzeae; Oryza. XX RN [1] RP 1-2059 RA Mase K., Nishikubo N., Satou K., Nakano Y., Kajita S., Katayama Y.; RT ; RL Submitted (09-OCT-2003) to the EMBL/GenBank/DDBJ databases. RL Contact:Kohei Mase Tokyo University of Agriculture and Technology, Graduate RL school of Bio-Applications and Systems Engineering; Nakamathi 2-24-16, RL Koganei, Tokyo 184-8588, Japan XX RN [2] RX DOI; 10.1007/s00299-006-0124-7 RX PUBMED; 16496151. RA Sato K., Mase K., Nakano Y., Nishikubo N., Sugita R., Tsuboi Y., Kajita S., RA Zhou J., Kitano H., Katayama Y.; RT "3-Deoxy-D-arabino-heptulosonate 7-phosphate synthase is regulated for the RT accumulation of polysaccharide-linked hydroxycinnamoyl esters in rice RT (Oryza sativa L.) internode cell walls"; RL Plant Cell Rep. 25(7):676-688(2006). XX FH Key Location/Qualifiers FH FT source 1..2059 FT /organism="Oryza sativa Japonica Group" FT /cultivar="Fujiminori" FT /mol_type="mRNA" FT /db_xref="taxon:39947" FT CDS 136..1710 FT /codon_start=1 FT /transl_table=1 FT /gene="DAHPS1" FT /product="3-deoxy-D-arabino heptulosonate-7-phosphate FT synthase" FT /db_xref="GOA:Q75LR2" FT /db_xref="InterPro:IPR002480" FT /db_xref="UniProtKB/Swiss-Prot:Q75LR2" FT /protein_id="BAD14924.1" FT /translation="MAGGAAVVPRSATATTASAFVTMKRRATAVRAVHAAEPSKNPPVG FT VPSAAKTSSPSVAAPEKAPVAAAPAPVAPAPAATKQVAPARWAVDSWRTKKALQLPEYP FT NAAELEAVLKTIEAFPPIVFAGEARHLEERLADAAMGRAFLLQGGDCAESFKEFNGNNI FT RDTFRVLLQMSAVLTFGGQMPVIKVGRMAGQFAKPRSEAFEERDGVKLPSYRGDNINGD FT AFNEKSRIPDPQRMVRAYAQSAATLNLLRAFATGGYAAMQRVTQWNLDFTQHSEQGDRY FT RELAHRVDEALGFMSAAGLTVDHPLMTSTDFWTSHECLLLPYEQSLTRQDSTTGHFYDC FT SAHMLWVGERTRQLDGAHVEFLRGVANPLGIKVSDKMNPTELVKLIEILNPSNKPGRIT FT IITRMGAENMRVKLPHLIRAVRHAGQIVTWITDPMHGNTIKAPCGLKTRPFDSIAEVRA FT FFDVHDQEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLGDRYHTHCDPRLNASQSLEL FT SFIIAER" XX SQ Sequence 2059 BP; 442 A; 607 C; 614 G; 396 T; 0 other; caccttcctc ctcaggagac accacccgcc gccgccgcct cctccattac cgagaagaag 60 agaaacctct cttctactgt tggatccaac tactacctac ccgcacgccg caattcgctc 120 gccaccagct cctcgatggc cggtggggcg gcggtggttc cacgcagcgc gacggcgacg 180 acggcctcgg cgttcgtcac gatgaagcgg cgcgccacgg ccgtgcgcgc cgtacacgcg 240 gcggagccgt cgaagaaccc gcccgtcggc gtcccgtccg cggcgaagac gtcgtcgccg 300 tcggtggcgg cgccggagaa ggcccccgtg gcggccgcgc ccgcgcctgt ggctccggct 360 ccggcggcca cgaagcaggt ggcgccggcg aggtgggcgg tggacagctg gaggacgaag 420 aaggcgctgc agctgccgga gtaccccaac gcggcggagc tggaggcggt gctcaagacg 480 atcgaggcgt tcccgccgat cgtgttcgcc ggggaggcga ggcacctgga ggagcgcctc 540 gccgacgccg ccatgggccg cgccttcctc ctccagggcg gcgactgcgc cgagagcttc 600 aaggagttca acggcaacaa catccgcgac accttccgcg tcctcctcca gatgtccgcc 660 gtcctcacct tcggcggcca aatgcccgtc atcaaggttg ggagaatggc ggggcaattc 720 gcgaagccga ggtcggaggc gttcgaggag agggacgggg tgaagctgcc gagctacagg 780 ggcgacaaca tcaatggcga cgcgttcaac gagaagagcc gcatccctga cccgcagagg 840 atggtccggg cctatgcgca gtccgccgcc acgctcaacc tcctccgcgc tttcgccacc 900 ggaggatacg ccgccatgca gcgcgtgacg cagtggaacc tcgatttcac ccagcacagc 960 gagcagggcg acaggtaccg tgaattggca cacagggttg atgaagccct tggctttatg 1020 tctgctgctg ggctaacagt ggaccacccg ttgatgacaa gtactgattt ctggacctca 1080 catgagtgcc ttctcctacc ctatgaacaa tctctgaccc gtcaggactc cacaactggt 1140 catttctacg actgctctgc ccacatgcta tgggtgggcg aacgcactcg ccagctcgat 1200 ggtgctcatg ttgagttcct caggggtgtg gccaaccctc ttggcatcaa ggtgagtgac 1260 aaaatgaacc caaccgagtt ggtgaagctg attgagattt tgaacccatc aaacaagcct 1320 gggagaatta ccatcatcac aaggatgggg gcagagaaca tgagggtcaa gttacctcat 1380 cttatccgtg cggtccgcca cgctggacaa attgtcacat ggattactga tccaatgcac 1440 gggaacacca tcaaggctcc ttgtggtctg aagacacgcc cctttgactc cattgccgag 1500 gtacgagcat tcttcgatgt gcatgatcaa gaaggaagcc acccaggagg tgtccacctc 1560 gagatgactg ggcagaacgt aaccgagtgc atcggcggat cccgaaccgt caccttcgat 1620 gacctgggtg accgctacca cacccactgc gacccgaggc tgaacgcgtc ccagtcgctg 1680 gagctctcct tcatcatcgc cgagaggtga ggaggaagag gatccggtcg tcgaagctga 1740 acaacatgtt gccgttgcca cccttcggtg tctgaatctg aaatgggtaa gggaaaccag 1800 gggaagacgg aggaatgacg aacggggtag ataagatagc tgcagcaaga actcgacgac 1860 gcctattcca tttgttggtg ggatgctctt ggtgaaatcc tatattttgc gagctttttt 1920 ttctgttgta acttttcagt tggtatatat atgctctgta atatcatgcc aggctgaaag 1980 gctttgacat ttcggttttt ctatgtttct atcatggata agagaataaa atgcaagata 2040 gaagaaggct ttgtgaata 2059 // |
|