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EBI DbfetchID AB117721; SV 1; linear; genomic DNA; STD; PRO; 3028 BP. XX AC AB117721; XX DT 07-FEB-2004 (Rel. 78, Created) DT 06-SEP-2006 (Rel. 89, Last updated, Version 3) XX DE Rhodococcus rhodochrous orf31, orf32, bphC3 genes for hypothetical proteins DE and 2, 3-dihydroxybiphenyl 1, 2-dioxygenase, partial and complete cds. XX KW . XX OS Rhodococcus rhodochrous OC Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales; OC Corynebacterineae; Nocardiaceae; Rhodococcus. XX RN [1] RP 1-3028 RA Taguchi K., Motoyama M., Kudo T.; RT ; RL Submitted (18-AUG-2003) to the EMBL/GenBank/DDBJ databases. RL Katsuhiko Taguchi, RIKEN, Laboratory of Environmental Molecular Biology; RL Hirosawa 2-1, Wako, Saitama 351-0198, Japan (E-mail:ktaguchi@riken.jp, RL Tel:81-48-467-9545, Fax:81-48-462-4672) XX RN [2] RX DOI; 10.1271/bbb.68.787 RX PUBMED; 15118304. RA Taguchi K., Motoyama M., Kudo T.; RT "Multiplicity of 2,3-dihydroxybiphenyl dioxygenase genes in the RT Gram-positive polychlorinated biphenyl degrading bacterium Rhodococcus RT rhodochrous K37"; RL Biosci. Biotechnol. Biochem. 68(4):787-795(2004). XX FH Key Location/Qualifiers FH FT source 1..3028 FT /organism="Rhodococcus rhodochrous" FT /strain="K37" FT /mol_type="genomic DNA" FT /clone="pKPC3" FT /db_xref="taxon:1829" FT CDS <1..306 FT /codon_start=1 FT /transl_table=11 FT /gene="orf31" FT /product="hypothetical protein" FT /note="homolorous to transmembrane transport protein" FT /db_xref="InterPro:IPR016196" FT /db_xref="UniProtKB/TrEMBL:Q762H7" FT /protein_id="BAD10893.1" FT /translation="LQASMYGPLAAYISEMFSTSARYTGAGLSYQLGATVGGFTPFIAA FT ALWELGRTHVATAGWEQYSMVGLYLIAACVVTIISVAAGKETKNLDLNSDSTVRSD" FT CDS 338..1204 FT /codon_start=1 FT /transl_table=11 FT /gene="orf32" FT /product="hypothetical protein" FT /note="homologous to hppC protein (3-(3-hydroxyphenyl) FT propionate hydrolase) of Rhodococcus globerulus PWD1" FT /db_xref="GOA:Q762H6" FT /db_xref="InterPro:IPR000073" FT /db_xref="UniProtKB/TrEMBL:Q762H6" FT /protein_id="BAD10894.1" FT /translation="MTTIDIPTYTTDPFFGLEDRWLRTADGELTHYHELGHGTSILFLH FT GSGTGVTAASNWWLNLPTLAEHGRCIAIDSIGYGQTVVAENTAYGIKEWVRHAVRVLDA FT LGIEKTWIVGNSLGGWLAFQFALDYPDRLLGIVSMGTGGAKLTGALAGHSNPTLNESGI FT RKTLELFVVDKSLVTDELVSLRYKAALNDTASDRLADVVAARDRDRHAVPLDFDRLAHL FT EIPVLLIHGVQDVVTPLSRTWDLLNAIPTSDAHIFGRCGHWSQVEKADEFNTVVGDYLR FT RHTGAGQ" FT CDS 1215..2165 FT /codon_start=1 FT /transl_table=11 FT /gene="bphC3" FT /product="2, 3-dihydroxybiphenyl 1, 2-dioxygenase" FT /function="meta-cleavage of 2, 3-dihydroxybiphenyl" FT /db_xref="GOA:Q762H5" FT /db_xref="InterPro:IPR004183" FT /db_xref="UniProtKB/Swiss-Prot:Q762H5" FT /citation=[2] FT /experiment="The activity of BphC produced in E.coli was FT measured." FT /protein_id="BAD10895.1" FT /translation="MTQALLCMSHSPLLDHATPPAEVKSAVDDAFARARDFVEAFDPEL FT VVNFGPDHFNGFFYDLMPPFCIGYRAHGTGDYDSFAGDLDVPEDVAADLAQFVLDHGSD FT VAISRHMEVDHGAVQPMEILHGGDAGARPILPVFVNSIARPFVPMSRVRAFGHAVGDFF FT AGTDKRVLFLGSGGLSHDPPVPQFATATASQREFLTSGRNPPPEARPARQARTIETARR FT FAAGEAEIMDLNPEWDRAFLDVCRSGRVEDFDRYTADEMDAAAGHSSHEVRTWVAAYSA FT LRACGEYDVTYEFYRPIKEYIAGFAVTTAQLAGEA" XX SQ Sequence 3028 BP; 524 A; 1088 C; 890 G; 526 T; 0 other; ctgcaggcat cgatgtatgg tccgctcgcg gcgtacatct ccgaaatgtt cagtacttct 60 gcgcgttaca ccggcgctgg gctctcctac cagctcggtg ccaccgtcgg cgggttcact 120 cccttcattg cggcggcact gtgggagctg ggccgcaccc acgtcgccac ggccggttgg 180 gaacagtact cgatggtggg cctctatctc atcgccgcgt gtgtcgtcac catcatctcc 240 gtagccgccg gtaaggagac gaaaaacctt gatctcaata gtgattcaac cgtccggtcc 300 gactagagca cgcgatacac acttcctgag gtgaaccttg actactatcg acatccccac 360 ctacaccacc gacccgttct tcggactcga ggacaggtgg ctccgcaccg ccgacggtga 420 gctcacccat taccacgagc taggccacgg gacatcgatt ctgttcctgc acggatcagg 480 gacaggtgtc accgcagcct ccaactggtg gctgaacctg ccgacactgg ccgagcacgg 540 tcgttgcatc gcgatcgact cgatcggcta cggacagacc gtcgtcgccg agaacaccgc 600 ctacggcatc aaggaatggg tgcggcacgc agtgcgtgtc ctcgacgctc tcggcatcga 660 gaagacctgg atcgtcggca actcgctcgg gggctggctg gcattccagt tcgcactcga 720 ctaccccgac cgcctcctcg gtatcgtctc gatgggaacc ggcggcgcga agctgaccgg 780 agccttggcc ggacattcga acccgacgct gaacgagtcc ggcatccgca agactctcga 840 gctcttcgtg gtcgacaagt cgctggtaac tgacgaactc gtatcactgc gctacaaagc 900 tgcgctcaac gacaccgcgt ccgaccggct cgccgacgtc gtcgccgcac gcgaccgcga 960 ccgccatgcg gtgcctctcg acttcgaccg tctcgcgcat ctggagatac ccgtgctgct 1020 catccacggc gttcaggacg tcgtcacccc gctctcccgc acgtgggacc tgctgaacgc 1080 gattccgacc tcggacgccc acatcttcgg ccggtgcgga cactggtctc aggtggagaa 1140 ggccgacgaa ttcaacaccg tggtcggcga ctacctgcgc cgccataccg gtgccggaca 1200 gtgagccacc gacgatgacc caggctctgc tgtgcatgtc ccacagccca ctgctcgacc 1260 atgccacccc tcccgcggag gtgaaatcgg ccgtagatga cgccttcgcg cgagcacgcg 1320 atttcgtcga ggcgttcgat ccggaactcg ttgtgaattt cggccccgac catttcaacg 1380 gcttcttcta cgacctgatg ccgccgttct gcatcggcta tcgggctcat gggaccggcg 1440 actacgactc gttcgccggc gatctcgacg tccccgaaga cgtcgcggcc gacctcgcgc 1500 agttcgtcct cgaccacggc agcgacgtcg ccatctcgag gcacatggaa gtagatcatg 1560 gtgccgtgca gccgatggag atcctccacg gcggagatgc cggtgcccgg ccgatccttc 1620 cggtcttcgt gaattcgatt gcgcgaccgt ttgtcccgat gtcgcgggtg cgcgcattcg 1680 ggcatgcggt cggcgacttc ttcgcgggca ccgacaagcg ggttctcttc ctcggttccg 1740 gtggcctctc gcacgaccct ccggtcccgc agttcgccac cgccaccgcg tcgcaacgcg 1800 aattcctcac gtcgggaagg aatccccctc ccgaggcccg tccggcgcgg caggcccgga 1860 cgatcgagac cgctcgtcgc ttcgcagcgg gtgaggccga gatcatggac ctcaatcccg 1920 aatgggaccg ggcgttcctc gacgtgtgcc ggtccgggcg tgtcgaggac ttcgaccgat 1980 acaccgccga cgagatggat gccgcagccg gacactcctc tcacgaagtc cggacgtggg 2040 tagccgccta ttccgcgctg cgagcgtgtg gggagtacga cgtgacctac gagttctaca 2100 gaccgatcaa ggagtacatt gccgggttcg ccgtcaccac ggcacaactg gccggcgagg 2160 cctgatccat tcaccaccgt cggcgcgtct gacgccgaca tccgctatct cgttttcgag 2220 ataccatcga tggtatgacc ggtcccgccc gacggacagc atttcccggt ttgcaagcac 2280 tggcagaccg tcggcgagca ctgatcgagg agctcgtgac ggcccgccgc gagagcggcc 2340 tgacccagac cgatatcggg gcggcgatgg ggacttcaca gtccgccatc gcgcgcctcg 2400 aacgcggcga actcgatgcc cggctgtcca ctctcgagcg atacgccgcc gccgtcgggc 2460 ggaccgtcga ttggcagatc cgcacccacg aggagccacc atgaccatct ggcctccacc 2520 accggtcccc ccgaccccag aaccgtttcc gaacccctgg cagcccgagc gtcccccgcc 2580 accacaaccg cctccaccgc ctccactccc ggcggcaccg gtgcacatct cggtcaccgg 2640 acccgatccg ctgaccgagc gtctgctcga gcggcgcatc gtcagactca ccggccggat 2700 cgacaccgac gcagccaacg acgcggcggg tgcgttggcc ctcctcgacg ccgacggcga 2760 cgaccccgtg cagctgtggt tgtgcgatgt cgacgccgat ctcgaagtga cgctgacatt 2820 gctcgacgtc ctcgatctca tgggagtgga gatccacgcc atctgcctcg gcgaactggt 2880 cggggcgggc gtcgcactcc tgaccgccgc cgaccggcgt gactccggcg tgcacacggt 2940 cttccacctg cgagaacctc gcacccgtta cagcggctac gccgccgacg cagccgccta 3000 caccgaacgc cagcagcgcc acctgcag 3028 // |
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