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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AB109017; SV 1; linear; mRNA; STD; INV; 1823 BP.
XX
AC   AB109017;
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DT   23-APR-2003 (Rel. 75, Created)
DT   14-APR-2005 (Rel. 83, Last updated, Version 2)
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DE   Cucumaria echinata cel3 mRNA for hemolytic lectin CEL-III, complete cds.
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KW   .
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OS   Cucumaria echinata
OC   Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Holothuroidea;
OC   Dendrochirotacea; Dendrochirotida; Cucumariidae; Cucumaria.
XX
RN   [1]
RP   1-1823
RA   Kouzuma Y.;
RT   ;
RL   Submitted (21-APR-2003) to the EMBL/GenBank/DDBJ databases.
RL   Yoshiaki Kouzuma, Ibaraki University, College of Agriculture; 3-21-1, Chuo,
RL   Ami-machi, Inashiki-gun, Ibaraki 300-0393, Japan
RL   (E-mail:kouzuma@mx.ibaraki.ac.jp, Tel:81-29-888-8682, Fax:81-29-888-8682)
XX
RN   [2]
RX   DOI; 10.1016/S0167-4838(99)00212-5
RX   PUBMED; 10561549.
RA   Nakano M., Tabata S., Sugihara K., Kouzuma Y., Kimura M., Yamasaki N.;
RT   "Primary structure of hemolytic lectin CEL-III from marine invertebrate
RT   Cucumaria echinata and its cDNA: structural similarity to the B-chain from
RT   plant lectin, ricin";
RL   Biochim. Biophys. Acta 1435(1-2):167-176(1999).
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FH   Key             Location/Qualifiers
FH
FT   source          1..1823
FT                   /organism="Cucumaria echinata"
FT                   /mol_type="mRNA"
FT                   /db_xref="taxon:40245"
FT   CDS             37..1365
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="cel3"
FT                   /product="hemolytic lectin CEL-III"
FT                   /db_xref="GOA:Q868M7"
FT                   /db_xref="InterPro:IPR000772"
FT                   /db_xref="InterPro:IPR008997"
FT                   /db_xref="PDB:1VCL"
FT                   /db_xref="PDB:2Z48"
FT                   /db_xref="PDB:2Z49"
FT                   /db_xref="UniProtKB/TrEMBL:Q868M7"
FT                   /protein_id="BAC75827.1"
FT                   /translation="MVSLVPCGFAQVLCTNPLDIGELRNYKSKQCVDIVGNQGSGNIAT
FT                   HDCDGLSDQQIIMCGDGTIRNEARNYCFTPDGSGNANVMSSPCTLYPEIPSSQRWRLGR
FT                   KKAFTDNGGIEQVATEIINLASGKCLDVEGSDGTGDIGVYDCQNLDDQYFYIRSRGPEL
FT                   FYGRLRNEKSDLCLDVEGSEGKGNVLMYSCEDNLDQWFRYYENGEIVNAKQGMCLDVEG
FT                   SDGSGNVGIYRCDDLRDQMWSRPNAYCNGDYCSFLNKESNKCLDVSGDQGTGDVGTWQC
FT                   DGLPDQRFKWVFDDWEVPTATWNMVGCDQNGKVSQQISNTISFSSTVTAGVAVEVSSTI
FT                   EKGVIFAKASVSVKVTASLSKAWTNSQSGTTAITYTCDNYDSDEEFTRGCMWQLAIETT
FT                   EVKSGDLLVWNPQIIKCTRSNTAPGCAPFTKCANEDCTFCTDI"
XX
SQ   Sequence 1823 BP; 548 A; 353 C; 453 G; 469 T; 0 other;
     ctgttctcgc tgagcaaaac tctttgcttt atcttcatgg tatccctggt tccatgcggg        60
     ttcgcacaag ttttgtgcac gaatccactg gatattggag aactacgcaa ttacaagtcc       120
     aagcaatgcg ttgacatagt tggtaatcaa ggatctggta acatagcgac gcatgattgt       180
     gatgggttat ctgaccaaca gattatcatg tgcggagatg ggaccattcg caatgaagct       240
     aggaattact gtttcacacc agatgggagt gggaacgcaa atgtgatgtc atctccgtgc       300
     accctgtatc cagaaattcc aagcagccaa cgatggagac tagggcggaa aaaggccttc       360
     actgacaatg gtgggatcga gcaggtagcg acggagatca tcaatcttgc atcaggtaaa       420
     tgtctagatg tggaaggcag cgacggtact ggcgatattg gagtctatga ctgtcaaaat       480
     ctagatgacc aatatttcta tattcgatca agagggccag agctgttcta cggtagactc       540
     cggaacgaga aatccgacct ttgtctcgat gttgagggat ctgaagggaa gggaaatgtc       600
     ttgatgtaca gttgtgaaga caacttggac caatggttcc gatactatga aaatggggag       660
     atcgtcaacg cgaagcaggg gatgtgtttg gatgtagagg gaagtgatgg aagtgggaat       720
     gtgggcatat atcgttgtga tgatttacgt gatcagatgt ggtcaaggcc gaatgcgtac       780
     tgtaacggag attactgctc cttcttgaat aaagaatcaa acaaatgcct tgatgtaagt       840
     ggcgaccaag gaacaggcga tgttggcaca tggcaatgtg acggactgcc agatcaacga       900
     ttcaaatggg tgtttgacga ttgggaggtc cccaccgcca cctggaacat ggttggatgt       960
     gaccagaatg gcaaagtgag tcagcaaatt tcaaacacaa tcagtttctc ttccacggtg      1020
     acagcgggag tggccgttga agtgtcatct acaatcgaaa aaggcgtaat ttttgccaaa      1080
     gcgtcagtga gcgttaaagt tacagcctcg ttgtctaaag catggaccaa tagccaatca      1140
     ggaacaactg caataaccta cacatgtgat aactatgaca gtgatgaaga atttactaga      1200
     ggatgcatgt ggcagctggc aatcgagaca actgaagtta agtctggcga tctgctggtt      1260
     tggaatccgc agatcatcaa gtgcacgagg tctaatacgg cgcctgggtg cgctccgttt      1320
     accaaatgtg ctaacgagga ttgcactttc tgcacggaca tttgaagttt gcctccaaat      1380
     acggagtccg gtgtctcttg tcatgcttga ccctcttaat atattagaaa actcagtctc      1440
     ttcatctggg atgaatcgag aggaatgtgg ggtagcagtg gggagtacgt gggaaaaata      1500
     atatttctcc ctaatgctgg ccatttattt gttcattatt cattaacagg aaaagcaaat      1560
     tcagtataca gtgtgacatt caaaagtagt aatttccata tcctaataaa taagcagaaa      1620
     gaaactcaat tggttaaaaa ttgggcattt tgattagata tggcccacaa cattagttcc      1680
     gactaaatat taccattcag aattttgtga cttcccgaaa aaccaacatc atcgattttt      1740
     ttcccattcg atgtactttt agagccaagt gatgccccgg aaaataccat aaccagctcc      1800
     cacggaaaaa aaaaaaaaaa aaa                                              1823
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