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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AB097559; SV 1; linear; genomic DNA; STD; PRO; 939 BP.
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AC   AB097559;
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DT   06-JUN-2003 (Rel. 76, Created)
DT   14-APR-2005 (Rel. 83, Last updated, Version 5)
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DE   Moritella sp. 2D2 mdh gene for malate dehydrogenase, complete cds.
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KW   .
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OS   Moritella sp. 2D2
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales;
OC   Moritellaceae; Moritella.
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RN   [1]
RP   1-939
RA   Nakayama A.;
RT   ;
RL   Submitted (05-DEC-2002) to the EMBL/GenBank/DDBJ databases.
RL   Akihiko Nakayama, Kinki University, Department of Fisheries, Faculty of
RL   Agriculture; 204-3327, Nakamachi, Nara, Nara 631-8505, Japan
RL   (E-mail:ankyma@nara.kindai.ac.jp, URL:http://www.nara.kindai.ac.jp/,
RL   Tel:81742431511(ex.3202), Fax:81742431316)
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RN   [2]
RX   PUBMED; 16349450.
RA   Nakayama A., Yano Y., Yoshida K.;
RT   "New Method for Isolating Barophiles from Intestinal Contents of Deep-Sea
RT   Fishes Retrieved from the Abyssal Zone";
RL   Appl. Environ. Microbiol. 60(11):4210-4212(1994).
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RN   [3]
RA   Nakayama A., Yano Y., Yoshida K.;
RT   "Sequential changes in cell morphology of an obligately barophilic deep-sea
RT   bacterium during its growth at high pressures";
RL   FEMS Microbiol. Lett. 141:51-57(1996).
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RN   [4]
RX   PUBMED; 16535638.
RA   Yano Y., Nakayama A., Yoshida K.;
RT   "Distribution of Polyunsaturated Fatty Acids in Bacteria Present in
RT   Intestines of Deep-Sea Fish and Shallow-Sea Poikilothermic Animals";
RL   Appl. Environ. Microbiol. 63(7):2572-2577(1997).
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RN   [5]
RX   PUBMED; 16349499.
RA   Yano Y., Nakayama A., Ishihara K., Saito H.;
RT   "Adaptive Changes in Membrane Lipids of Barophilic Bacteria in Response to
RT   Changes in Growth Pressure";
RL   Appl. Environ. Microbiol. 64(2):479-485(1998).
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RN   [6]
RX   DOI; 10.1016/j.femsle.2004.02.004
RX   PUBMED; 15043884.
RA   Saito R., Nakayama A.;
RT   "Differences in malate dehydrogenases from the obligately piezophilic
RT   deep-sea bacterium Moritella sp. strain 2D2 and the psychrophilic bacterium
RT   Moritella sp. strain 5710";
RL   FEMS Microbiol. Lett. 233(1):165-172(2004).
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FH   Key             Location/Qualifiers
FH
FT   source          1..939
FT                   /organism="Moritella sp. 2D2"
FT                   /strain="2D2"
FT                   /mol_type="genomic DNA"
FT                   /isolation_source="intestinal content from a deep-sea fish,
FT                   Coryphaenoides yaquinae"
FT                   /db_xref="taxon:215801"
FT   CDS             1..939
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="mdh"
FT                   /product="malate dehydrogenase"
FT                   /EC_number="1.1.1.37"
FT                   /db_xref="GOA:Q7X3X5"
FT                   /db_xref="InterPro:IPR015955"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7X3X5"
FT                   /experiment="experimental evidence, no additional details
FT                   recorded"
FT                   /protein_id="BAC77301.1"
FT                   /translation="MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVD
FT                   LSHIPTDVTITGFSGIDPTAALVGADVVLISAGVARKPGMDRSDLFNINAGIIKNLASK
FT                   CAEVCPTACIGIITNPVNTTVPIAAEVLKQAGVYDKRKLFGITTLDVIRSETFVSALKG
FT                   ISLADVAVPVIGGHSGATILPLLSQVKGVEFTAEEIATLTTRIQNAGTEVVEAKAGGGS
FT                   ATLSMGHAAARFGLSLVRALQGEKGIVECTYVDGGSEHATFFAQPVLLGKNGVEEVLAY
FT                   GDLSDFETNARDAMLEELKANITLGEEFVAG"
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SQ   Sequence 939 BP; 232 A; 205 C; 235 G; 267 T; 0 other;
     atgaaagtcg ctgtattagg tgctgctggt ggtatcggtc aagctttagc ccttcttttg        60
     aaaactcaat tacctgcggg ttctgaactg tcgctatatg atatcgcgcc agttacaccg       120
     ggtgttgctg ttgatttaag tcatatccct acagacgtta ctattactgg tttttcgggt       180
     atagatccaa cggctgcact ggttggtgct gacgtggtac ttatctcggc gggtgttgct       240
     cgtaaaccag gtatggaccg ttcagatcta ttcaatatca atgctggcat tatcaaaaat       300
     ctagcgagta aatgtgcgga agtatgccca acggcatgta tcggtattat tactaatcca       360
     gttaacacga cggtgccaat tgcggccgaa gtacttaagc aagcgggcgt gtacgacaaa       420
     cgtaaactat tcggtatcac tactctggat gttattcgtt ctgagacttt cgtcagtgcg       480
     cttaaaggca tttcacttgc tgacgttgca gtacccgtta tcggtggtca ctccggtgca       540
     acaattctgc cgctactttc tcaagttaaa ggtgttgaat ttacggctga agaaattgcg       600
     acactcacga cccgcattca aaacgccggt actgaagtgg ttgaagctaa agcgggtggc       660
     ggttctgcga cactttctat gggtcatgcc gctgcacgtt tcggtctctc tctggtgcgc       720
     gcactacaag gagaaaaagg tattgttgag tgtacttatg ttgacggtgg ctctgagcac       780
     gcgacattct tcgcccaacc ggtattactc ggtaaaaacg gcgttgaaga agtactcgca       840
     tacggtgact taagcgactt tgaaaccaac gcacgcgatg ctatgttaga agaactaaaa       900
     gcgaatatca ccttaggtga agaattcgtt gctggttaa                              939
//
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