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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AB093547; SV 1; linear; genomic DNA; STD; PRO; 1109 BP.
XX
AC   AB093547;
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DT   10-MAR-2003 (Rel. 75, Created)
DT   22-FEB-2008 (Rel. 94, Last updated, Version 4)
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DE   Clostridium sp. JC3 gene for cellulase, partial cds.
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KW   .
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OS   Clostridium sp. JC3
OC   Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae;
OC   Clostridium.
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RN   [1]
RP   1-1109
RA   Hao L., Nagaya Y., Syutsubo K., Miya A.;
RT   ;
RL   Submitted (11-OCT-2002) to the EMBL/GenBank/DDBJ databases.
RL   Contact:Lingyun Hao Ebara Corp. Technologies, Research & Development
RL   Division Administration Office; 4-2-1 Honfujisawa, Fujisawa, Kanagawa
RL   251-8502, Japan
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RN   [2]
RA   Syutsubo K., Nagaya Y., Miya A.;
RT   "Identification of dominant cellulose-degrading bacteria in thermophilic
RT   methanogenic consortia";
RL   Unpublished.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1109
FT                   /organism="Clostridium sp. JC3"
FT                   /strain="JC3"
FT                   /mol_type="genomic DNA"
FT                   /country="Japan:Niigata, Joetsu"
FT                   /isolation_source="digested sludge"
FT                   /note="This strain is also named as FERM P-19026"
FT                   /db_xref="taxon:210830"
FT   CDS             <1..1101
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="cbhA"
FT                   /product="cellulase"
FT                   /db_xref="GOA:Q845W7"
FT                   /db_xref="HSSP:1CLC"
FT                   /db_xref="InterPro:IPR001701"
FT                   /db_xref="InterPro:IPR008928"
FT                   /db_xref="InterPro:IPR012341"
FT                   /db_xref="InterPro:IPR018221"
FT                   /db_xref="UniProtKB/TrEMBL:Q845W7"
FT                   /inference="non-experimental evidence, no additional
FT                   details recorded"
FT                   /protein_id="BAC65236.1"
FT                   /translation="EFYWAACELYITTGKDEYKNYLMSSPHYLEMPAKMEGTNEDGGLW
FT                   GCFTWGTTAGLGTVSLALVPNGLPSSEIQKARNNIAKAADAWLDNIEDQGYRLPIKQAE
FT                   DERGGYPWGSNSFILNMMIVMAYARDFTGNDKYFDGIQDSISYLLGRNAMDQSYVTGYG
FT                   ERPLTNPHDRFWTPQTSAKWPAPPAGIISGGPNSRFEDPTINAAVLKDTPPQKCFIDHT
FT                   DSWSTNEITVNWNAPFAWVTAYLDEQYTDSDTARVSIDSPVAGTRFEAGKDVEISATVK
FT                   ADVPVSKVEFYNGDELISSDSSAPYTAKISKAAVGAYDLKAVAVLSDGRRIESPITPIL
FT                   VKVIVKPTVTLTSPKSNVVIHGIPST"
XX
SQ   Sequence 1109 BP; 341 A; 218 C; 268 G; 282 T; 0 other;
     gaattctact gggcagcatg cgaactctat ataaccaccg gtaaagacga atataagaat        60
     tacttgatga gttcacctca ctatcttgaa atgcctgcga agatggaagg tacaaacgaa       120
     gacggcggat tatggggctg cttcacatgg ggaactacag caggattggg aactgtttcc       180
     ttggcattgg tacctaatgg tttaccgtct tcagaaatac agaaggcaag aaacaatata       240
     gccaaagcag ctgatgcatg gcttgataat attgaagacc agggatacag gctgccaatc       300
     aagcaggcag aggatgaacg cggtggatat ccgtggggtt caaactcatt tattcttaat       360
     atgatgattg ttatggcata tgctcgtgat ttcacaggaa atgataaata ttttgacgga       420
     atccaagaca gtataagcta cctgttggga agaaatgcaa tggaccagtc ttatgtaaca       480
     ggatatggtg agcgtccgct tacaaatcct catgacagat tctggacacc acagacaagt       540
     gcaaaatggc cggcaccgcc tgcaggtata atttcaggag gaccaaactc ccgttttgag       600
     gatccgacaa taaatgcggc agtattgaag gatacacctc cacagaagtg ctttatcgac       660
     catacggatt catggtcgac caacgaaata actgttaact ggaatgctcc ttttgcatgg       720
     gttacggctt atcttgacga gcagtacacc gacagcgata ctgcaagggt aagtattgat       780
     tcgccggttg caggaacaag gtttgaggcc ggcaaggatg ttgaaataag tgcaaccgtt       840
     aaagctgatg ttcctgtgag caaggtagag ttttataatg gggacgagct tatttccagt       900
     gactcaagtg caccgtatac tgcaaaaata tccaaggctg ctgtgggtgc atatgacctt       960
     aaggctgttg cagttctctc cgacggaaga agaattgagt caccgataac tccaatttta      1020
     gttaaagtaa ttgttaaacc tactgttaca ttgacttcac ccaagtcaaa tgtagtaatt      1080
     cacggaatac cgagtacttg aagattact                                        1109
//
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