EBI Dbfetch

ID   AB092837; SV 2; linear; mRNA; STD; FUN; 1189 BP.
XX
AC   AB092837;
XX
DT   05-APR-2003 (Rel. 75, Created)
DT   15-AUG-2006 (Rel. 88, Last updated, Version 5)
XX
DE   Phanerochaete chrysosporium lam16A mRNA for putative laminarinase, complete
DE   cds.
XX
KW   .
XX
OS   Phanerochaete chrysosporium
OC   Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes;
OC   Corticiales; Corticiaceae; Phanerochaete.
XX
RN   [1]
RP   1-1189
RA   Yoshida M., Kawai R., Igarashi K., Samejima M.;
RT   ;
RL   Submitted (04-OCT-2002) to the EMBL/GenBank/DDBJ databases.
RL   Masahiro Samejima, The University of Tokyo, Graduate School of Agricultural
RL   and Life Sciences; 1-1-1 Yayoi, Bunkyo-ku, Tokyo 113-8657, Japan
RL   (E-mail:amsam@mail.ecc.u-tokyo.ac.jp, Tel:81-3-5841-5255(ex.25255),
RL   Fax:81-3-5841-5273)
XX
RN   [2]
RX   DOI; 10.1007/s00253-005-0214-4
RX   PUBMED; 16374635.
RA   Kawai R., Igarashi K., Yoshida M., Kitaoka M., Samejima M.;
RT   "Hydrolysis of beta-1,3/1,6-glucan by glycoside hydrolase family 16
RT   endo-1,3(4)-beta-glucanase from the basidiomycete Phanerochaete
RT   chrysosporium";
RL   Appl. Microbiol. Biotechnol. 71(6):898-906(2006).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1189
FT                   /organism="Phanerochaete chrysosporium"
FT                   /strain="K-3"
FT                   /mol_type="mRNA"
FT                   /db_xref="taxon:5306"
FT   CDS             44..1000
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="lam16A"
FT                   /product="putative laminarinase"
FT                   /db_xref="InterPro:IPR008985"
FT                   /db_xref="PDB:2CL2"
FT                   /db_xref="PDB:2W39"
FT                   /db_xref="PDB:2W52"
FT                   /db_xref="UniProtKB/TrEMBL:Q874E3"
FT                   /protein_id="BAC67687.1"
FT                   /translation="MRFAALASLVAAALIPSSYAATYHLEDNWVGSAFLSTFTHEAIAD
FT                   PTHGRVNYVDQATALAKNLTYASGDTLILRADHTTTLSPSGPGRNSVRIRSIKTYTTHV
FT                   AVFDVRHMPQGCGTWPAAWETDEGDWPNGGEVDIIEGVNDQSPNAMTLHTGANCAMPAS
FT                   RTMTGHATNNNCDVNTDGNTGCGVQAPTANSYGPSFNANGGGWYAMERTNSFIKVWFFP
FT                   RNAGNVPNDIASGPATINTDNWGTPTAFFPNTNCDIGSHFDANNIIINLTFCGDWAGQA
FT                   SIFNGAGCPGSCVDYVNNNPSAFANAYWDIASVRVYQ"
XX
SQ   Sequence 1189 BP; 266 A; 394 C; 297 G; 232 T; 0 other;
     agccagacac ttccgcacct ctcagctcct cgtagcatcc aaaatgcgct tcgccgccct        60
     cgcttccctc gtcgctgctg cgctcattcc tagcagctac gctgccacct accacctcga       120
     agacaattgg gttggctctg ccttcctgag caccttcact cacgaggcta ttgcggaccc       180
     gacgcacgga cgggtaaact acgtcgacca ggcaaccgcc cttgcaaaga acttgaccta       240
     tgctagtggc gacaccctca tcctccgtgc tgaccacacc accaccctga gcccgagcgg       300
     ccccggtagg aacagtgtcc gcatccggag tatcaaaacc tacaccacgc atgtcgctgt       360
     cttcgatgtg cgccacatgc cccagggctg cggtacttgg cccgctgcat gggagaccga       420
     cgaaggtgat tggcccaatg ggggcgaagt ggacatcatc gagggcgtca acgaccaatc       480
     gccgaacgcg atgacactcc acaccggcgc gaactgcgcc atgcccgcga gccgcacgat       540
     gaccggccac gccacgaaca acaactgcga tgtgaacacg gacggaaaca caggctgcgg       600
     tgtccaggcg cccacggcca acagctacgg cccgtccttc aacgcgaacg gcggcggctg       660
     gtacgcgatg gagcgcacga acagcttcat caaggtctgg ttcttccccc gcaacgccgg       720
     taacgtcccc aacgacatcg cgagtggccc tgcgacgatc aatacggaca actggggcac       780
     gccaactgcc ttcttcccga acaccaactg cgacatcggc tcccactttg atgccaataa       840
     cattatcatc aacctcacct tctgcggtga ctgggccggc caggcgtcca tcttcaatgg       900
     cgctggatgc cccggcagct gcgttgacta cgtcaataac aaccccagtg cgttcgctaa       960
     cgcatactgg gacatcgcct cggtccgggt ctaccagtaa atttgcactg agtccaagat      1020
     gacaaaaaac cacgcgcatt ttgttgtgtt tttctcgaca tctgtgctgc cgccacgaga      1080
     tggcgagatg taaacttact ttgtatatat gttgtgtatg cctcttctag atgttgtatt      1140
     tcatatacca gagggctaaa tatacatggg cccggagttc acaaactgc                  1189
//