 |
|
EBI DbfetchID AB063255; SV 1; linear; genomic DNA; STD; PRO; 2445 BP. XX AC AB063255; XX DT 16-DEC-2001 (Rel. 70, Created) DT 14-APR-2005 (Rel. 83, Last updated, Version 2) XX DE Pseudomonas sp. ND137 axnA gene for beta-1,4-xylanase, complete cds. XX KW . XX OS Pseudomonas sp. ND137 OC Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; OC Pseudomonadaceae; Pseudomonas. XX RN [1] RP 1-2445 RA Kamei Y., Yukihisa A.; RT ; RL Submitted (14-JUN-2001) to the EMBL/GenBank/DDBJ databases. RL Yuto Kamei, Saga University, Marine and Highland Bioscience Center; RL shonan-cho, Karatsu, Saga 847-0021, Japan (E-mail:kameiy@cc.saga-u.ac.jp, RL Tel:81-955-77-4484, Fax:81-955-77-4486) XX RN [2] RA Aoki Y., Kitamura E., Myouga H., Kamei Y.; RT "Protoplast production of red alga Porphyra yezoensis by recombinant RT enzymes from Pseudomonas sp."; RL Unpublished. XX FH Key Location/Qualifiers FH FT source 1..2445 FT /organism="Pseudomonas sp. ND137" FT /strain="ND137" FT /mol_type="genomic DNA" FT /country="Japan:Saga, Ariake Sea" FT /clone_lib="lambda ZAP Pseudomonas sp. ND137 genomic DNA" FT /clone="AXNA108" FT /sub_clone="pAXNA108" FT /note="vector:AXNA108P" FT /db_xref="taxon:147640" FT -35_signal 1205..1210 FT /inference="non-experimental evidence, no additional FT details recorded" FT -10_signal 1227..1232 FT /inference="non-experimental evidence, no additional FT details recorded" FT RBS 1242..1246 FT /inference="non-experimental evidence, no additional FT details recorded" FT CDS 1255..2295 FT /codon_start=1 FT /transl_table=11 FT /gene="axnA" FT /product="beta-1,4-xylanase" FT /db_xref="GOA:Q8VUT4" FT /db_xref="HSSP:1M4W" FT /db_xref="InterPro:IPR001137" FT /db_xref="InterPro:IPR008985" FT /db_xref="InterPro:IPR013319" FT /db_xref="InterPro:IPR018208" FT /db_xref="UniProtKB/TrEMBL:Q8VUT4" FT /protein_id="BAB79287.1" FT /translation="MHAKKSLAILTTAAAVLSVAATQAQTLTSNQTGTHNGYYYSFWTD FT APGTVSMTLGSGGNYSSQWSNTGNWVGGKGWNPGGRRTVSYSGTFNPSGNGYLTLYGWT FT TSPLIEYYIVDNWGSYRPGESGTYYGTVNTDGGTYDIYRTQRVNQPSIQGTATFYQYWS FT VRQQKRTGGTITTGNHFDAWASHGLNLGNHDYMVMATEGYQSSGNSNITLGTTGGGNNG FT GGSNNGGDVTVRARGVSGSEHINLRVGGATVADWTLTTSNQSYTYSGGASGDVNVEYDN FT DASGRDVILDYVTVNGENRQAEDMEYNTATYANGECGGGSYSETMHCSGVIGFGHTDDC FT FSGNCN" XX SQ Sequence 2445 BP; 625 A; 724 C; 590 G; 506 T; 0 other; gatctccgac ccgaattgtc cccgcctcgc gaagggcgcc ataaataccc agattttgcg 60 ccgcccggcg aacaatggtg cgcaacatgg atttatcggc tccgaggccg gcttgcgcgc 120 gtgtaacggc gccacagcgt ggcgcggctg ccgtacaatc tacgggcaag cccgccagca 180 acaattgccg ccccagccaa gtttgctcta acaacccctc agccccatcg ctggtttcaa 240 taacaacatt tggacgaaaa cgacgcacat cccaatcagc cgccggcaat tgcttttgca 300 gacaccttac gcttgccgta gtaataatat gaaacggcga caccagaaag aaggtgccgg 360 gcaatgtgac aaagtcctgc gcctgttgcg gcatttgact aaaatccggc agaggttcgc 420 caggctcgcg ggcaaaagtg tcttttaact catcgagcca gctgtgctta ttaggcttat 480 agcgccggta aaagtgtcgg ttgtcacccg ccttatccag cggcttgagc gactctagcg 540 tcgacgggtg ccccactagc tccgacagcc gttgatgaat atgtaagtcg tcgctggcga 600 tgacatcgcc gctgggcata accacatcaa ccgcaccgct ggggcgtaac gctgccgtgc 660 actgcagtaa ctccggacga aacttgcaac tttgaatttc cccacgggca gaatcgcgca 720 gcgcccaaac ccgatccccc tcaagcccct cagggccaag gtcacactga gcgagcgact 780 cccccgccat ccctttaacc ggatagcgcc atatctcttt gattactcca acgtgctgca 840 tacctgaccc aatcaaaagc tcaggttaat gcacaaagat gctcaccaca ctacgtcaaa 900 tgcacacccc cgatacacga taacgatcaa taaagtcaga ccaatgcgac taatagcccc 960 tcttatttat atgattattg cttgctagaa cagttaaagt taacaacgat tacgcgaacc 1020 acctcccacc ttatggttat ttcgaccaaa accttatagt cccattgacc acgatagctg 1080 tgacctctac agtgttaacc gcttaactct ttttaacgat aaaagcagtg ggttaagtcg 1140 cccaaatgtt tgctcctaga aagcaaacca tccttaacgc ctcttcctct aaaggtggta 1200 ttggttgcga ggcataaccg gagagttatt ataaccataa taaaagccac aaaaatgcac 1260 gccaaaaaaa gcttagccat tctgactacc gccgctgccg tattatcggt agccgccacc 1320 caggcacaaa ccctaacctc taaccaaacc ggtacccaca acggttacta ctactcgttc 1380 tggaccgatg ccccaggcac ggtatcgatg acgctgggct ccggcggcaa ctattcgtca 1440 cagtggagca ataccggcaa ctgggtgggc ggcaaaggtt ggaatccggg cgggcgtcgt 1500 accgtaagtt actccggtac ctttaacccg tccggtaacg gatatctgac actgtacggc 1560 tggaccacca gcccactgat tgagtattac atcgtcgata actggggcag ctatcgcccc 1620 ggcgagagcg gcacctacta cggcaccgtc aataccgacg gcggcaccta cgatatctac 1680 cgcacccaac gggttaacca gccctcaatt cagggtaccg ctaccttcta ccaatactgg 1740 agcgtgcgtc agcaaaaacg cactggcggc accattacca ccggtaatca ctttgacgcc 1800 tgggccagcc acggcttaaa cctcggtaac cacgattaca tggtgatggc taccgaaggc 1860 tatcaaagca gcggtaactc caacattacc cttggcacaa ccggcggtgg caataacggt 1920 ggcggcagca acaatggtgg cgatgttacc gtacgcgcgc gcggcgtcag cggcagtgaa 1980 cacattaacc tgcgggtggg cggcgcgacg gtagccgact ggacattaac caccagcaac 2040 caaagctaca cctatagcgg tggcgccagt ggcgatgtaa acgttgaata cgacaacgac 2100 gcctctggcc gcgatgtgat tttagattac gtcacggtca atggtgagaa tcgtcaggcg 2160 gaagatatgg agtacaacac agcgacttac gccaacggcg aatgtggtgg cggctcttac 2220 tcagaaacca tgcactgcag cggtgtcatt ggctttggcc ataccgacga ttgttttagc 2280 ggcaactgta actaaacgga gggtgtttaa ataatcgttt ctgaacggtt tataacggag 2340 ggcctacccc ggtaggccct cttcatcctc gcagaattaa gagctgccga cttgtgtcat 2400 cgccgcttgc atctgctccc agtgagcctc taaaaaatcg agatc 2445 // |
|