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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AB061269; SV 1; linear; genomic DNA; STD; PRO; 1427 BP.
XX
AC   AB061269;
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DT   04-SEP-2001 (Rel. 69, Created)
DT   19-APR-2005 (Rel. 83, Last updated, Version 3)
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DE   Bacillus sp. TS-3 abn-ts gene for arabinase-TS, complete cds.
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KW   .
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OS   Bacillus sp. TS-3
OC   Bacteria; Firmicutes; Bacillales; Bacillaceae; Bacillus.
XX
RN   [1]
RP   1-1427
RA   Sakai T., Takao M.;
RT   ;
RL   Submitted (06-MAY-2001) to the EMBL/GenBank/DDBJ databases.
RL   Takuo Sakai, Kinki University, Department of Food Science and Nutrition,
RL   Faculty of Agriculture; 3327-204, Nakamachi, Nara, Nara, 631-8505, Japan
RL   (E-mail:tsakaiku@nara.kindai.ac.jp, Tel:81-742-43-1511(ex.3419),
RL   Fax:81-742-43-2252)
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RN   [2]
RX   DOI; 10.1271/bbb.66.430
RX   PUBMED; 11999422.
RA   Takao M., Yamaguchi A., Yoshikawa K., Terashita T., Sakai T.;
RT   "Molecular cloning of the gene encoding thermostable
RT   endo-1,5-alpha-L-arabinase of Bacillus thermodenitrificans TS-3 and its
RT   expression in Bacillus subtilis";
RL   Biosci. Biotechnol. Biochem. 66(2):430-433(2002).
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FH   Key             Location/Qualifiers
FH
FT   source          1..1427
FT                   /organism="Bacillus sp. TS-3"
FT                   /strain="TS-3"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:159344"
FT   -35_signal      174..179
FT                   /inference="non-experimental evidence, no additional
FT                   details recorded"
FT   -10_signal      197..202
FT                   /inference="non-experimental evidence, no additional
FT                   details recorded"
FT   RBS             258..264
FT                   /inference="non-experimental evidence, no additional
FT                   details recorded"
FT   CDS             275..1216
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="abn-ts"
FT                   /product="arabinase-TS"
FT                   /db_xref="GOA:Q93HT9"
FT                   /db_xref="InterPro:IPR006710"
FT                   /db_xref="InterPro:IPR016840"
FT                   /db_xref="PDB:1WL7"
FT                   /db_xref="UniProtKB/TrEMBL:Q93HT9"
FT                   /protein_id="BAB64339.1"
FT                   /translation="MVHFHPFGNVNFYEMDWSLKGDLWAHDPVIAKEGSRWYVFHTGSG
FT                   IQIKTSEDGVHWENMGRVFPSLPDWCKQYVPEKDEDHLWAPDICFYNGIYYLYYSVSTF
FT                   GKNTSVIGLATNRTLDPRDPDYEWKDMGPVIHSTASDNYNAIDPNVVFDQEGQPWLSFG
FT                   SFWSGIQLIQLDTETMKPAAQAELLTIASRGEEPNAIEAPFIVCRNGYYYLFVSFDFCC
FT                   RGIESTYKIAVGRSKDITGPYVDKNGVSMMQGGGTILDAGNDRWIGPGHCAVYFSGVSA
FT                   ILVNHAYDALKNGEPTLQIRPLYWDDEGWPYL"
XX
SQ   Sequence 1427 BP; 392 A; 269 C; 363 G; 403 T; 0 other;
     agatctagga tgtatggaac ctatgaaggc tagggatttg tgggccaaag aggatctagg        60
     attagttaac atcaactggc atttgaatta ggtccccatc agtcgatatt ggtgaaatta       120
     tccccagctg tagggaaggg gttatagact ttgttttttt gattcttaaa gaattgagaa       180
     actatggcat gttccatctc agcaatggtt tgggcttaaa acaatatgtt aataaagttc       240
     tgaaaataat ccaaattaaa aggagactaa gcaaatggtt catttccacc cctttggcaa       300
     tgttaacttt tacgaaatgg attggagtct taagggagat ttatgggctc atgatccagt       360
     catcgcaaaa gagggaagtc gatggtatgt ttttcacacc gggagcggca ttcaaatcaa       420
     aacatctgaa gatggggttc attgggagaa tatgggccgg gtatttccat cgttgccgga       480
     ttggtgcaag cagtatgttc cagaaaaaga cgaagatcat ttatgggcgc ccgatatatg       540
     tttttataac ggaatttact atctgtatta ttcagtctct acctttggaa aaaacacatc       600
     ggtgattgga ttggcgacca atcggaccct tgacccgcga gatcctgact atgaatggaa       660
     agacatgggt cccgttattc attcaacggc ttccgataac tataatgcga tagatccgaa       720
     tgtagttttt gatcaggagg ggcaaccttg gttaagtttc ggttcttttt ggtcgggaat       780
     tcagttgatt cagctcgaca ctgaaacaat gaaacctgcc gcgcaggccg agttgctgac       840
     gattgccagc aggggtgagg agcctaatgc gatcgaagcc ccttttatcg tgtgccggaa       900
     cggatattat tatttgtttg tatcatttga tttttgctgc cgcggtattg aaagcacgta       960
     taaaatcgcc gttggtaggt caaaggacat tacagggcca tacgtagaca aaaatggtgt      1020
     atcgatgatg cagggaggcg gcacgattct tgacgcaggg aacgaccgtt ggataggacc      1080
     agggcattgc gccgtttatt tctcgggggt ttccgccatt cttgtaaacc atgcgtacga      1140
     cgctctcaaa aacggagagc caacgttgca aatccggcct ttgtattggg atgatgaagg      1200
     gtggccgtat ttgtaaaagt ttcaaaaagc gaaaaggata tttcctcgtg atgctagttg      1260
     aacgttagaa cttaactagc cctagtgtaa ccagcgaata ggctaacaat atgccgtcga      1320
     gggctacctc aaatccaaga tcgaactcgc tcggttctcg gtggtactgt attggtcgac      1380
     cggaatcggg aatatcgtct caatcacttt gcgttttgat tggatcc                    1427
//
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