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EBI DbfetchID AB053204; SV 1; linear; genomic DNA; STD; PRO; 3198 BP. XX AC AB053204; XX DT 08-JAN-2001 (Rel. 66, Created) DT 31-AUG-2001 (Rel. 68, Last updated, Version 2) XX DE Citrobacter freundii adi, melR, melA genes for arginine decarboxylase, DE melibiose operon regulatory protein and alpha-galactosidase, prtial and DE complete cds. XX KW . XX OS Citrobacter freundii OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Citrobacter. XX RN [1] RP 1-3198 RA Shimamoto T., Shimamoto T.; RT ; RL Submitted (04-JAN-2001) to the EMBL/GenBank/DDBJ databases. RL Tadashi Shimamoto, Hiroshima University, Faculty of Applied Biological RL Science; 1-4-4 Kagamiyama, Higashi-Hiroshima, Hiroshima 739-8528, Japan RL (E-mail:tadashis@hiroshima-u.ac.jp, Tel:81-824-24-7897, Fax:91-824-22-7067) XX RN [2] RX PUBMED; 11275561. RA Shimamoto T., Shimamoto T., Xu X.J., Okazaki N., Kawakami H., Tsuchiya T.; RT "A cryptic melibiose transporter gene possessing a frameshift from RT Citrobacter freundii"; RL J. Biochem. 129(4):607-613(2001). XX FH Key Location/Qualifiers FH FT source 1..3198 FT /organism="Citrobacter freundii" FT /strain="M4" FT /mol_type="genomic DNA" FT /db_xref="taxon:546" FT CDS complement(<1..362) FT /codon_start=1 FT /transl_table=11 FT /gene="adi" FT /product="arginine decarboxylase" FT /db_xref="GOA:Q9F1K4" FT /db_xref="InterPro:IPR005308" FT /db_xref="UniProtKB/TrEMBL:Q9F1K4" FT /protein_id="BAB20426.1" FT /translation="MMKVLIVESEFLHQDTWVGSAVERLADALSRQNVTVIKSTSFDDG FT YAILAANEAIDCLMFSYQMEQQDEHLNVRQLIGKLHERQQNVPVFLLGDREKATASLDR FT DLLELVDEFAWILETAL" FT CDS complement(597..1529) FT /codon_start=1 FT /transl_table=11 FT /gene="melR" FT /product="melibiose operon regulatory protein" FT /db_xref="GOA:Q9F1K3" FT /db_xref="InterPro:IPR000005" FT /db_xref="InterPro:IPR008917" FT /db_xref="InterPro:IPR009057" FT /db_xref="InterPro:IPR011051" FT /db_xref="InterPro:IPR012287" FT /db_xref="InterPro:IPR018060" FT /db_xref="InterPro:IPR018062" FT /db_xref="InterPro:IPR020449" FT /db_xref="UniProtKB/TrEMBL:Q9F1K3" FT /protein_id="BAB20427.1" FT /translation="MSTLPTSPLPPDPHMCSSDEEQTRSPLSLYSEYQRMDIELRSPHA FT MPASHWHGQVEINVPFDGDVEYLINNEVVQIKQGHITLFWACTPHQLTRPGSCQSMAIF FT NLPMHLFLSWPLDRELINHVTHGMVIKSLASQQLSTFEVQRWQQELNNPNEQIRQLAID FT EIGLMLKRFSLSGWQPILVNKTSRTHKNSVSRHAQFYVSQMLSFIADNYDQALTINDVA FT EHVKLNANYAMGIFQRVMQLTLKQYITAMRINHVRALLSDTDKTILDVALTAGFRSSSR FT FYDTFSKFVGMSPQQYRKLSQQHRQTMAG" FT CDS 1799..3154 FT /codon_start=1 FT /transl_table=11 FT /gene="melA" FT /product="alpha-galactosidase" FT /db_xref="GOA:Q9F1K2" FT /db_xref="InterPro:IPR001088" FT /db_xref="InterPro:IPR015955" FT /db_xref="InterPro:IPR016040" FT /db_xref="InterPro:IPR019802" FT /db_xref="UniProtKB/TrEMBL:Q9F1K2" FT /protein_id="BAB20428.1" FT /translation="MMSAPKITFIGAGSTIFVKNILGDVFHRDALKSAHIALMDLDPTR FT LEESHVVVRKLMDSAGASGRITCYTDQKAALQDADFVVVAFQIGGYEPCTVTDFTVCKR FT HGLEQTIADTLGPGGIMRALRTIPHLWQICEDMTEVCPQATMLNYVNPMAMNTWAMYAR FT YPHIKQVGLCHSVQGTAEELARDLNIDPASLRYRSAGINHMAFYLELERKTADGAYVNL FT YPELLAAYESGQAPKPNIHGNTRCQNIVRYEMFKKLGYFVTESSEHFAEYTPWFIKPGR FT EDLIERYKVPLDEYPKRCVEQLANWKKELEEYKTAERIDIKPSREYASTIMNAIWTGEP FT SVVYGNVRNDNLIDNLPQGCCVEVACLVDANGIQPTKVGALPSHLAAMMQTNINVQTLL FT TEAILTENRDRVYHAAMMDPHTAAVLGIEEIYALVDDLIASHGDWLPAWLHR" XX SQ Sequence 3198 BP; 748 A; 751 C; 873 G; 826 T; 0 other; agcgctgtct ccagaatcca ggcgaattca tcgacaagct ccagcaggtc gcgatccagc 60 gatgcggtgg ctttttcgcg atcgcccagc aggaatacgg gaacgttttg ctggcgctcg 120 tggagcttgc cgatcaattg cctgacgttc aggtgttcgt cttgttgttc catttgatag 180 ctgaacatca ggcaatcaat ggcttcattg gcggcgagga ttgcgtagcc atcgtcgaat 240 gaggtggact taatgacggt aacattttgg cggcttaatg cgtcagccag acgttcgaca 300 gcgctaccga cccaggtgtc ctgatgcaga aactcacttt caacaattaa tactttcatc 360 atcttttacc cggttgtgga aaggttgcaa tctatgaatt gcagacacac cgtatgaatg 420 tgacgcaggc aagtattatc ctgtcaaaac gggctgtaaa gcgggtgaaa aatagtctga 480 tttatgttta atttgttttt aaacatatgg ttacgtttgc ttgttggcgg tttttcacca 540 ccgtttatcg acagggggaa tatttttttg gctgatactg atatggccga atgatatcaa 600 ccagccattg tttgccgatg ctgctggctt agtttgcggt actgctgcgg cgacatgccg 660 acaaacttgc tgaaggtgtc ataaaaacgg ctgctggaac ggaatccggc ggtcaacgca 720 acgtcgagaa tggttttatc ggtatcgcta agtaatgcgc ggacgtgatt gatccgcatt 780 gccgtgatgt actgcttcag ggtgagttgc atcacgcgtt ggaaaatccc catcgcgtag 840 ttggcgttga gcttcacgtg ttccgcgacg tcgttgatgg tgagcgcctg atcgtagtta 900 tcggcaataa agctcagcat ttggctgacg taaaactggg cgtgccgaga cacgctgttt 960 ttgtgggtcc gcgaggtttt attgacgagt ataggctgcc agccggaaag gctaaaccgc 1020 ttgagcatca gaccaatttc atcaatggcg agctggcgaa tttgttcgtt cgggttgttc 1080 agttcctgtt gccagcgctg aacttcaaag gtgctcaact gctgcgacgc cagcgatttg 1140 atgaccattc catgggtaac atggttgatc aactcgcgat ccagcggcca ggagaggaaa 1200 aggtgcatcg gtaaattgaa gatagccata ctttggcaac tgcccggacg cgtgagttga 1260 tgcggtgtgc aggcccagaa tagcgtgatg tgtccctgtt ttatctgtac gacttcgttg 1320 ttgatcagat actcgacgtc accatcaaac ggcacattga tctccacctg cccatgccaa 1380 tggctggctg gcatagcatg cggtgagcgc aactcgatat ccatccgttg atattctgag 1440 tacagcgata gcgggctgcg ggtttgttct tcatcgctac tgcacatgtg cggatcggga 1500 ggaagaggcg atgtcggtaa tgtactcatg gttgctccat ttcctgaatt atcagaatca 1560 tgtcatttaa cacgtattaa ggctgagaat caggacacaa attggaccgt taccattgag 1620 catagcgaca ttttgcggcc acatactctg ctttttgggt aattttgtcc cataaactca 1680 gatccaatag ggtgcagagt gatgatctga gtttatggga atgctcagca gagaagtcgg 1740 aagttttcag ctatacgctg tgccaccatg actgtgttta ctaatgttct ggagagtcat 1800 gatgtctgca cccaaaatta cctttatcgg cgccggttcc acgattttcg tcaaaaatat 1860 tcttggggac gtctttcacc gcgatgcgct taaatctgcg catatcgcct tgatggatct 1920 cgatcctacg cgtctggaag agtcacacgt tgttgtgcgc aagttgatgg attctgcggg 1980 cgcgtctgga cgaatcacct gctataccga tcaaaaagca gcattacagg atgctgattt 2040 tgtggtggtc gctttccaga tcggcggcta tgaaccctgt accgtcaccg attttacggt 2100 gtgtaaacgc catggtctgg agcagacgat tgccgacacg ctggggccgg gcggcattat 2160 gcgcgcgctg cgcaccattc cgcatttatg gcagatttgt gaggatatga ccgaagtctg 2220 tccgcaggcc accatgctta actacgttaa cccgatggcg atgaacacct gggcaatgta 2280 tgcacgctat ccgcatatta agcaggttgg gctgtgtcat tcggtgcagg ggacggcgga 2340 ggagttggcc cgcgatctga acattgaccc tgcctctttg cgctatcgca gtgccgggat 2400 caaccatatg gcattttatc tggagctgga gcgcaaaacg gcggacggcg cctatgtgaa 2460 tctctacccg gagctgctgg cggcctatga atccggtcag gcaccgaaac cgaatattca 2520 cggaaatacc cgttgccaga acattgtgcg ctatgaaatg ttcaaaaaac tggggtattt 2580 cgtcaccgaa tcgtcggaac acttcgccga atatacgccg tggtttatca aaccggggcg 2640 tgaagatctg attgagcgct ataaggtgcc attggatgaa tatccgaaac gttgtgtgga 2700 acagttggcg aactggaaaa aagagctgga agagtacaaa acggctgagc ggatcgacat 2760 taaaccgtcg cgcgaatatg ccagcactat catgaacgct atctggaccg gtgaaccgag 2820 cgtcgtgtat ggcaacgttc gcaatgacaa tctgatcgat aacctgccac aaggttgctg 2880 tgttgaagtc gcttgtctgg ttgatgcgaa tggtattcag ccaacgaaag tcggtgctct 2940 cccgtcacat ttggcggcta tgatgcaaac caatatcaat gttcagactc tgctaacgga 3000 agccatcctg acggagaacc gcgatcgtgt ttatcacgca gcgatgatgg atccgcatac 3060 cgccgcggta ctggggattg aagagattta tgcgctggtg gacgacctga tcgcgtctca 3120 cggcgactgg ctgccggcct ggctgcaccg ttaatacaca atcacgccgg gcagagcatc 3180 cggcgtttaa cctctgac 3198 // |
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