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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AB048949; SV 1; linear; genomic DNA; STD; PLN; 1701 BP.
XX
AC   AB048949;
XX
DT   19-MAR-2001 (Rel. 67, Created)
DT   14-APR-2005 (Rel. 83, Last updated, Version 2)
XX
DE   Hordeum vulgare Bmy1 gene for Sd1 beta-amylase, complete cds.
XX
KW   .
XX
OS   Hordeum vulgare
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP clade;
OC   Pooideae; Triticeae; Hordeum.
XX
RN   [1]
RP   1-1701
RA   Li C., Langridge P., Zhang X., Eckstein P.E., Rossnagel B.G., Lance R.C.,
RA   Lefol E.B., Lu M., Harvey B.L., Scoles G.J.;
RT   ;
RL   Submitted (15-SEP-2000) to the EMBL/GenBank/DDBJ databases.
RL   Chengdao Li, University of saskatchewan, Plant Science; 51 Campus Drive,
RL   Saskatoon, saskatchewan S7N5A8, Canada (E-mail:lic@usask.ca,
RL   Tel:13069668476, Fax:13069665015)
XX
RN   [2]
RA   Li C., Langridge P., Zhang X., Eckstein P.E., Rossnagel B.G., Lance R.C.,
RA   Lefol E.B., Lu M., Harvey B.L., Scoles G.J.;
RT   "Mapping of Barley (Hordeum vulgare L.) Beta-amylase Alleles in which an
RT   Amino Acid Substitution Determines Beta-amylase Isoenzyme Type and the
RT   Level of Free Beta-amylase";
RL   Unpublished.
XX
DR   GrainGenes; AB048949; AB048949.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1701
FT                   /organism="Hordeum vulgare"
FT                   /chromosome="4H"
FT                   /cultivar="RFLP-Harrington"
FT                   /mol_type="genomic DNA"
FT                   /country="Canada:Saskatchewan, Saskatoon"
FT                   /tissue_type="developing grain"
FT                   /db_xref="taxon:4513"
FT   CDS             38..1645
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="Bmy1"
FT                   /product="Sd1 beta-amylase"
FT                   /db_xref="GOA:Q9AVJ8"
FT                   /db_xref="HSSP:1B1Y"
FT                   /db_xref="InterPro:IPR013781"
FT                   /db_xref="UniProtKB/TrEMBL:Q9AVJ8"
FT                   /protein_id="BAB39391.1"
FT                   /translation="MEVNVKGNYVQVYVMLPLDAVSVNNRFEKGDELRAQLRKLVEAGV
FT                   DGVMVDVWWGLVEGKGPKAYDWSAYKQLFELVQKAGLKLQAIMSFHQCGGNVGDAVNIP
FT                   IPQWVRDVGTCDPDIFYTDGHGTRNIEYLTLGVDNQPLFHGRSAVQMYADYMTSFRENM
FT                   KEFLDAGVIVDIEVGLGPAGEMRYPSYPQSHGWSFPGIGEFICYDKYLQADFKAAAAAV
FT                   GHPEWEFPNDVGQYNDTPERTQFFRDNGTYLSEKGRFFLAWYSNNLIKHGDRILDEANK
FT                   VFLGYKVQLAIKISGIHWWYKVPSHAAELTAGYYNLHDRDGYRTIARMLKRHRASINFT
FT                   CAEMRDSEQSSQAMSAPEELVQQVLSAGWREGLNVACENALPRYDPTAYNTILRNARPH
FT                   GINQSGPPEHKLFGFTYLRLSNQLVEGQNYANFKTFVDRMHANLPRDPYVDPMAPLPRS
FT                   GPEISIEMILQAAQPKLQPFPFQEHTDLPVGPTGGMGGQAEGPTCGMGGQVKGPTGGMG
FT                   GQAEDPTSGMGGELPATM"
XX
SQ   Sequence 1701 BP; 440 A; 417 C; 483 G; 361 T; 0 other;
     tgaagttgta gagcatcatc catagccagc atccacaatg gaggtgaacg tgaaaggcaa        60
     ctatgtccaa gtctacgtca tgctccctct ggacgccgtg agcgtgaaca acaggttcga       120
     gaagggcgac gagctgaggg cgcaattgag gaagctggta gaggccggtg tggatggtgt       180
     catggtagac gtctggtggg gcttggtgga gggcaagggc cccaaggcgt atgactggtc       240
     cgcctacaag cagttgtttg agctggtgca gaaggctggg ctgaagctac aggccatcat       300
     gtcgttccac cagtgtggtg gcaacgtcgg cgacgccgtc aacatcccaa tcccacagtg       360
     ggtgcgggac gtcggcacgt gtgatcccga cattttctac accgacggtc acgggactag       420
     gaacattgag tacctcactc ttggagttga taaccagcct ctcttccatg gaagatctgc       480
     cgtccagatg tatgccgatt acatgacaag cttcagggag aacatgaaag agttcttgga       540
     tgctggtgtt atcgtcgaca ttgaagtagg acttggccca gctggagaga tgaggtaccc       600
     atcatatcct cagagccacg gatggtcgtt cccaggcatc ggagaattca tctgctatga       660
     taaataccta caagcagact tcaaagcagc agcagcggcg gttggccatc ctgagtggga       720
     atttcctaac gatgtcgggc agtacaatga cactcccgag agaactcaat tcttcagaga       780
     caacgggaca tacctaagtg agaaggggag gtttttcctt gcatggtact ccaacaatct       840
     gatcaagcac ggtgacagga tcttggatga agcaaacaag gtcttcttgg gatacaaggt       900
     gcaactggca atcaagatct ctggcattca ctggtggtac aaggttccaa gccatgcagc       960
     cgagctcaca gctgggtact acaacttaca tgatagagac ggctacagaa ccatagcacg      1020
     catgctcaaa aggcaccgtg ctagcattaa cttcacttgc gcggagatga gggattcgga      1080
     gcaaagctcg caggcgatga gcgcaccaga agaactagtc caacaggtgt tgagtgctgg      1140
     atggagagag ggcctaaatg tggcatgcga aaacgcgctt ccacgatatg atccaactgc      1200
     ttacaacacc atactcagga atgcgaggcc tcatggaatc aaccagagcg gccctcctga      1260
     gcacaagctg tttggattca cctaccttcg gctgtcgaat cagctggtgg agggacaaaa      1320
     ctatgccaat ttcaagacct ttgtcgacag aatgcatgcc aacctgcctc gtgacccata      1380
     tgttgatcca atggcgcctt tgccaagatc agggccagaa atatcgattg agatgatcct      1440
     acaagcagca cagccaaaac tgcagccatt ccccttccag gagcacaccg acctgccagt      1500
     aggccctact ggtggcatgg gtgggcaggc tgaaggcccc acctgtggca tgggtgggca      1560
     agttaaaggc cctactggtg gcatgggtgg gcaggctgaa gaccctacta gtggcatggg      1620
     tggggagctc cctgccacca tgtaatggaa cctttatgat ttactaccct ttatgttgtg      1680
     tgtgagtgtg acagagaaac c                                                1701
//
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