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EBI DbfetchID AB046706; SV 1; linear; genomic DNA; STD; PRO; 3989 BP. XX AC AB046706; XX DT 02-AUG-2001 (Rel. 68, Created) DT 14-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Bacillus sp. GL1 rhaB gene for rhamnosidase B, complete cds. XX KW . XX OS Bacillus sp. GL1 OC Bacteria; Firmicutes; Bacillales; Bacillaceae; Bacillus. XX RN [1] RP 1-3989 RA Hashimoto W., Nankai H., Murata K.; RT ; RL Submitted (31-JUL-2000) to the EMBL/GenBank/DDBJ databases. RL Wataru Hashimoto, Kyoto University, Research Institute for Food Science; RL Gokasho, Uji, Kyoto 611-0011, Japan RL (E-mail:hasimoto@food2.food.kyoto-u.ac.jp, Tel:81-774-38-3768, RL Fax:81-774-38-3767) XX RN [2] RX DOI; 10.1016/S0003-9861(03)00231-5 RX PUBMED; 12831847. RA Hashimoto W., Miyake O., Nankai H., Murata K.; RT "Molecular identification of an alpha-L-rhamnosidase from Bacillus sp RT strain GL1 as an enzyme involved in complete metabolism of gellan"; RL Arch. Biochem. Biophys. 415(2):235-244(2003). XX FH Key Location/Qualifiers FH FT source 1..3989 FT /organism="Bacillus sp. GL1" FT /mol_type="genomic DNA" FT /db_xref="taxon:84635" FT CDS 642..3512 FT /codon_start=1 FT /transl_table=11 FT /gene="rhaB" FT /product="rhamnosidase B" FT /db_xref="GOA:Q93RE7" FT /db_xref="InterPro:IPR008902" FT /db_xref="InterPro:IPR008928" FT /db_xref="InterPro:IPR008979" FT /db_xref="InterPro:IPR013737" FT /db_xref="PDB:2OKX" FT /db_xref="UniProtKB/TrEMBL:Q93RE7" FT /protein_id="BAB62315.1" FT /translation="MAGRNWNASWIWGGQEESPRNEWRCFRGSFDAPASVEGPAMLHIT FT ADSRYVLFVNGEQVGRGPVRSWPKEQFYDSYDIGGQLRPGVRNTIAVLVLHFGVSNFYY FT LRGRGGLIAEIEADGRTLAATDAAWRTERLGGQRSNSPRMACQQGFGEVIDARELAEDW FT ALPAFDDGGWAQARSIGPAGTAPWTSLVPRDIPFLTEEKLYPASIQSLSRVKAPKYAAA FT LDLRNQMVPESVNHANPVSYCGYVATILTLETSGVVTLGFPTGVRGSGVWVDGVLQTEW FT TGVQPERYYSLNLAAGEHLVLVDITSSDHGGSSHFAIDSEAAFTLRSPAGDNGVPLATI FT GTFDQSEYIDHRPGRRMQTDHPDYRALPEAAPTAAALEAFASWVKPFEPSLYTEENVFG FT SNVWRTLAERRAVPRSVLNAILPVPEPGVLPVFEDGDCELVIDLGAERSGFIGFELEAP FT AGTIIDAYGVEYMREGYTQHTYGLDNTFRYICREGRQSYVSPVRRGFRYLFLTVRGNSA FT PVKLHEIYIRQSTYPVAEQGSFRCSDALLNATWEISRHTTRLCMEDTFVDCPSYEQVFW FT VGDSRNEALVNYYVFGETEIVERCLNLVPGSADETPLYLDQVPSAWSSVIPNWTFFWIL FT ACREYAAHTGNEAFAARIWPAVKHTLTHYLEHIDDSGLLNMAGWNLLDWAPIDQPNEGI FT VTHQNLFLVKALRDSRALAAAAGATEEADAFAARADLLAETINAVLWDEEKRAYIDCIH FT ADGRRSDVYSMQTQVVAYLCGVAQGEREAVIEGYLSSPPPAFVQIGSPFMSFFYYEALE FT KAGRQTLMLDDIRRNYGQMLRYDATTCWEMYPNFAENRSNPDMLTRSHCHAWSAAPGYF FT LGSSILGVKRGADGWRTVDIAPQPCDLTWAEGVVPLPQGGHIAVSWEFVSAGKLKLRIE FT APEDIEVNVTLPEGIEGEVTQVKYMS" XX SQ Sequence 3989 BP; 776 A; 1200 C; 1277 G; 736 T; 0 other; gatcctgcaa tttccgccag ccgccgtctc ccggcgcaag gtccagacag gacagcgcgc 60 gctcaagccg atggagtccc gggaagccgc gcagcgcttc ggccatgcgt tcggcctcga 120 agataaaatt gtatacgaca agcggcttgc cggcgttcgc cgagctgggg cggaacacat 180 gcgaggcccc caacggcagc gtgaacaggt ctccgcggcg aacgcgcagc cgctcttctc 240 cgatgtattg atgcccctcg ccttcgccga cgtagctgat ctccgtaaac tcgtgggcat 300 ggtaaccaat ctcgtacgat tcggaaacgc gattgatgta gaacggcagc tccccgtcaa 360 aaaagatgtg ggagggcgtt acttcgattc tctgcttgat catcgcgcga caactcccgc 420 tatatcgatt tgcgccggcc agcccgatcc cctgatgtcg tgaaggcgat gcgtcttccg 480 cacctccgcg catgccggcg aaccgcgcca tcctttcaac tgcttatgat ggcaggatac 540 accgtctaga tggcacgatc aacccttttc ttgcgtggtc gcgcggctac aatgaaggat 600 aggaacacat acggccggag gccggggatg gaggcagcgc gatggcaggc aggaattgga 660 acgcttcatg gatttgggga ggacaagagg agagtccgcg caacgagtgg cggtgcttcc 720 ggggaagctt cgacgcgcct gcgtcggtcg agggaccggc catgcttcat ataacggcgg 780 attcgcgata cgtactgttc gtgaacggcg agcaagtggg gagaggcccc gtgcgctcct 840 ggccgaagga gcagttttac gattcgtacg acatcggcgg gcagctgcgc ccgggcgtcc 900 gcaatacgat cgcggtgctg gtgcttcatt tcggcgtgtc gaacttttat tacttgcgcg 960 gacgcggcgg gctgatcgcc gagatcgaag ccgatggccg cacgcttgcg gcgacggatg 1020 ccgcatggcg gacggagcgg ctgggcggac agcgttccaa ttcccctcgg atggcctgcc 1080 agcagggatt cggggaagtc atcgacgcgc gcgagctggc ggaagactgg gcccttccgg 1140 cgttcgacga cggcggctgg gcgcaagccc gatcgatcgg acccgcaggc acggcgccct 1200 ggacctcgct cgttccgcgc gatattcctt ttttgacgga agaaaagctg tatcccgcct 1260 cgatccagtc gcttagccgg gtgaaggcgc ccaagtacgc agccgcgctg gatctgcgca 1320 atcaaatggt gcccgagagc gttaaccatg cgaaccccgt ctcctactgc ggttatgtgg 1380 cgacgatcct cacgctcgag acaagcggcg tcgtcacgct cggattcccg accggcgtac 1440 gggggagcgg cgtatgggtc gacggcgtcc tgcaaaccga gtggacgggc gtgcagccgg 1500 agcgatatta cagcttgaac ctcgctgcag gcgagcatct ggttcttgtc gatattacga 1560 gctccgacca tggcggcagc agccattttg ccatcgacag cgaagcggcg ttcacgctgc 1620 gctcgccggc cggcgacaat ggcgtgccgc tggcgacgat cggtacgttc gaccagtccg 1680 aatacatcga tcaccgcccg ggcagacgga tgcagacgga ccatccggat tatcgggcgc 1740 tgccggaagc cgcgcctacc gccgccgcgc ttgaagcgtt cgcttcctgg gtcaagccgt 1800 tcgagccttc gctctatacg gaggaaaacg tgttcggatc taacgtatgg cgaacgctcg 1860 ccgaacgcag ggcggtgccg agatccgttc tgaacgcgat attgccggtt cccgagccgg 1920 gcgtcctgcc cgtattcgag gacggagact gcgagctcgt catcgatctg ggcgcggagc 1980 gctccgggtt tatcggcttc gagctcgaag cgcccgccgg tacgatcatc gatgcctatg 2040 gcgtcgaata tatgagagaa ggctacacgc agcacacgta cgggctcgac aacacgttcc 2100 gctatatttg ccgcgaaggc agacaatcgt acgtgtcccc cgtgcgccgc ggtttccggt 2160 acttgttcct gaccgtcaga ggcaatagcg cgccggtgaa gctgcacgag atttatatcc 2220 gccagagcac gtacccggtc gcggaacaag gcagcttccg ctgctccgac gcgctgctga 2280 acgcaacgtg ggagatcagc aggcacacca ccagattgtg catggaggac acgttcgtcg 2340 actgcccgtc ctatgaacag gtgttctggg tgggcgacag ccgcaacgag gcgctggtca 2400 actattacgt tttcggcgag accgagatcg tggagcgctg cctgaatctc gtgccgggct 2460 cggcggacga gacgccgctt tatctcgacc aggtgccgag cgcatggagc agcgtcatcc 2520 cgaactggac gttcttctgg atactcgctt gccgggaata tgccgcgcat acgggcaacg 2580 aagccttcgc cgcccgcatc tggcctgcgg tgaagcacac gctgacgcat tatttagaac 2640 acatcgacga cagcggcctg ctgaacatgg cgggttggaa tctgctggac tgggcgccga 2700 tcgaccagcc gaacgaaggc atcgtcaccc accagaacct gttcctcgtc aaggcgcttc 2760 gggattcgcg ggcgcttgcc gccgcggccg gcgcaaccga agaggcagac gcgttcgcgg 2820 cgcgcgccga ccttctggcc gagacgatca acgcggtatt gtgggacgag gaaaagcgcg 2880 cttatatcga ttgcatccac gcggacgggc gccgttcgga cgtatacagc atgcagacgc 2940 aggtcgtcgc ttatctgtgc ggggttgcgc agggcgaacg cgaagccgtc atcgaaggct 3000 acctgtcgtc cccgccgccg gctttcgtac agatcggcag cccgtttatg tcgtttttct 3060 actacgaggc gctcgagaag gccggccgtc aaacgctgat gctcgacgac atccgccgca 3120 attacggcca gatgctgcgc tacgatgcca cgacctgttg ggagatgtat ccgaactttg 3180 cggaaaatcg cagcaacccg gacatgctga cccgcagcca ttgccatgca tggtcggcgg 3240 cgccgggcta tttcctgggc tcgagcattc tcggcgtcaa gcggggagct gacgggtggc 3300 gaaccgtcga tatcgcgccg cagccttgcg atctaacctg ggccgaaggc gtcgtgccgc 3360 tgccgcaggg cggtcacatc gcggtgagct gggagttcgt atccgccggc aagctgaagc 3420 ttagaatcga ggcgccggag gatatcgagg tgaacgtgac gctgcccgaa ggaatagaag 3480 gcgaagtgac gcaggttaag tatatgagct aagcaggacg aagatcgggc gaaatacaca 3540 agcaatgggc tctccccaag atgcgcaatc gcatcgcagg gagagctttt tattttaggc 3600 gcatcgtttc ggaacggatc ttcggggcct actttcgacc ggccggttta aaccggccgc 3660 ggttagccga cactgcataa cactctgcat ccacgtcagc cttcagggag agacgcgcat 3720 tgcctttgtt cggaaatcga acgcatcttc tatctcgcaa gtcgcgacgg aacaagcggg 3780 cggcggggaa cgcgggacct tcgaccggcg gaggcgcggg cggcggacgg ctggacggac 3840 ggctggacga gctgcttgcc cgggcgacgc gcgtcttcgg cacggacacg acgttgaccg 3900 tccgcaaatt ccgcatcttc ggcatgttcc cggcggcgat gctttatttc cccaacatgc 3960 tcgaccagaa caccttgaac gagacgatc 3989 // |
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