 |
|
EBI DbfetchID AB042622; SV 1; linear; genomic DNA; STD; PRO; 3095 BP. XX AC AB042622; XX DT 14-NOV-2000 (Rel. 65, Created) DT 26-DEC-2007 (Rel. 94, Last updated, Version 5) XX DE Pseudoalteromonas piscicida nagA gene for GlcNAcase A, complete cds. XX KW . XX OS Pseudoalteromonas piscicida OC Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; OC Pseudoalteromonadaceae; Pseudoalteromonas. XX RN [1] RP 1-3095 RA Tsujibo H.; RT ; RL Submitted (12-MAY-2000) to the EMBL/GenBank/DDBJ databases. RL Contact:Hiroshi Tsujibo Osaka University of Pharmaceutical Sciences, RL Department of Microbiology; 4-20-1 Nasahara, Takatsuki, Osaka 569-1094, RL Japan XX RN [2] RX PUBMED; 7613001. RA Tsujibo H., Fujimoto K., Kimura Y., Miyamoto K., Imada C., Okami Y., RA Inamori Y.; RT "Purification and characterization of beta-N-acetylglucosaminidase from RT Alteromonas sp. strain O-7"; RL Biosci. Biotechnol. Biochem. 59(6):1135-1136(1995). XX FH Key Location/Qualifiers FH FT source 1..3095 FT /organism="Pseudoalteromonas piscicida" FT /strain="O-7" FT /mol_type="genomic DNA" FT /note="originally submitted as 'Alteromonas sp. O-7'" FT /db_xref="taxon:43662" FT RBS 305..308 FT /note="putative" FT CDS 315..2906 FT /codon_start=1 FT /transl_table=11 FT /gene="nagA" FT /product="GlcNAcase A" FT /db_xref="GOA:Q9FAC5" FT /db_xref="HSSP:1QBA" FT /db_xref="InterPro:IPR001540" FT /db_xref="InterPro:IPR004866" FT /db_xref="InterPro:IPR004867" FT /db_xref="InterPro:IPR008965" FT /db_xref="InterPro:IPR012291" FT /db_xref="InterPro:IPR013781" FT /db_xref="InterPro:IPR013812" FT /db_xref="InterPro:IPR014756" FT /db_xref="InterPro:IPR015882" FT /db_xref="InterPro:IPR015883" FT /db_xref="InterPro:IPR017853" FT /db_xref="UniProtKB/TrEMBL:Q9FAC5" FT /protein_id="BAB17855.1" FT /translation="MRIKTTLLGAIIAGCSFYTQASFTQQQLAQFASDTHFEFAVENNF FT SNGAGGFSGAITLTNNSKVDLPKGQSDWQIYLHSVRHISTETAEGLRFEHINGDLHRIT FT PTDSFAGLKAGEKLKLAFDGSAWIAAYSDFMPRAFIVSGKNKPVIFTNTDTEDMTQFVA FT PFERENQLKRYNTPTDYTQIANAALRFERNQSNISVSKEDALRRINPKPEHIDFSRGEI FT TLNKNWQIRFAGRLKSEVAVFQEDLSEYGLDLKAEANHVPEGNIPTIRLKVAKSLGRDY FT DYNQAGSYTLDIDDDVIEITGIDNAGVFYGIQSLLALFPADSNNEITLSHVEIKDSPRF FT SWRGMHYDNARNYHGKDALFKLIEQMARYKLNKFHWHFSDDEGWRLEIPGLPELTEVGA FT FRCFDLQERECLLTQLGTGPFKTGSGNGYLSREDFVELLKFATARHIEIIPEIESPGHA FT RAAIKSMEARYHKLMEAGKAQEAKAYLLNDIDDTSKYLTVQLYTDNSINVCLDSSYAFM FT EKVVYELQEMYRDAGTMLTTVHFGGDEVGKGSWTESPACNDLFAVADNGVAGPNDLKPY FT FTQKVAKLLAKRGITPAAWEDGLMYNTTTTFKRDEFPNPQFLVNTWDNIWEWGVADRAH FT RFANNNYQVILSHGTHLYFDHPYEAHPEERGYYWATRYTDTKKAFSYMPDNIYANADFT FT RNREPIVNLEALVGRELPALKRPQNILGMQGQIWSETIRSEDQVLRLIFPRLLSLAERA FT WHKADWEGRRINQKELNKDFSTFAAALSLKEIAKLQNDGIKPNLPVPGAKVVLGKLEAN FT SAFPYLAIEVSLDNGESWQPYTDQMSISDESKVLLRTRAGEKNTSRVTGLK" FT sig_peptide 315..356 XX SQ Sequence 3095 BP; 925 A; 616 C; 706 G; 848 T; 0 other; gaattcgtgg cggttttatt gcgttccagc agtaaatccg ccgcttttta cgacatcaaa 60 ttacaactct ctaaacttcc tacaaaatat cacactcaat tccgcacttt ctgcaagcac 120 ttgctatttc caggtcaagt tcatcgttat ttgatggtat ttacagccaa atcagagtag 180 cttcattttg tctaacacaa ggatatgaaa aaataatgat agcgctgtca ttttaacttt 240 tatatgatgt ttaggaacaa taagtgatta aatgatgttc attttgaatt ggacatgaag 300 actgggagca aaagatgaga ataaaaacga ctttgcttgg ggcgataatt gctgggtgct 360 cgttctatac acaagcatca ttcacgcagc agcagttagc gcagtttgca agtgacacgc 420 attttgaatt tgcggtagaa aataacttca gtaatggtgc agggggcttt agcggtgcta 480 ttacactgac taacaattca aaagttgatc taccaaaagg acaaagcgat tggcaaatct 540 atttgcactc agttcgtcat atctcaacgg aaacagctga aggtctgcgc tttgagcata 600 ttaatggcga ccttcatcgt atcaccccta ccgattcgtt tgctggttta aaagcgggtg 660 aaaagctcaa gttagctttt gatggttcgg cttggattgc tgcatacagc gattttatgc 720 cgcgtgcctt tattgtgtca ggtaaaaata aaccggtcat ttttacaaat actgatacag 780 aagatatgac gcaattcgtt gcgccatttg aacgtgagaa ccagctgaaa agatacaata 840 cgcctaccga ttacacgcag atagcgaacg cagcgctgcg ttttgaacgt aatcaaagca 900 atatttccgt ctcaaaagaa gatgcgctaa gacgtatcaa tccaaagcct gagcacatcg 960 actttagtcg tggcgaaatc actcttaaca aaaactggca gatccgcttt gccggacgtt 1020 tgaagtcaga agtcgccgtg tttcaagaag acttatcaga gtatggactg gatttaaaag 1080 ctgaagctaa tcacgtgcct gaagggaata tcccgacgat ccgtcttaag gtagcgaaaa 1140 gcctagggcg cgattatgac tacaaccaag ctgggtcgta tacattagat attgacgatg 1200 atgtgattga aatcacgggt attgataacg ccggtgtgtt ttatggtatt caaagtttgc 1260 tagcgctatt tccagccgat agtaacaatg aaattacctt gtctcacgta gagatcaaag 1320 actctccgcg ctttagctgg cgtggcatgc attacgacaa tgcccgtaac tatcatggta 1380 aagatgcgtt atttaaatta attgaacaga tggcgcgtta taagttaaat aagttccatt 1440 ggcacttttc tgatgatgaa ggttggcgct tggagatccc cgggctccct gagttaacag 1500 aagtcggcgc atttcgctgt tttgatttac aagagcgtga gtgcttactg actcagttgg 1560 gcacaggtcc tttcaaaacg ggaagtggaa atggttacct ctctcgcgag gactttgtcg 1620 aattacttaa atttgccact gcgcgtcata tcgagatcat tccagaaatc gaaagcccag 1680 ggcatgctcg tgctgcgatt aagtcgatgg aagcgcgtta tcacaaattg atggaagcag 1740 gtaaagcgca agaggccaaa gcctatcttc tgaacgatat tgatgacact tcaaagtatc 1800 taaccgtgca gctatacaca gataactcta ttaatgtttg cttggactca agctatgcct 1860 ttatggagaa agtggtatat gagctgcagg aaatgtatcg cgatgctggc actatgctaa 1920 cgacagtcca ttttggtggc gatgaggttg gaaaggggtc atggactgaa tcaccagcat 1980 gtaatgatct atttgcggtc gccgacaacg gagtggctgg acccaatgat ttaaaaccat 2040 actttactca aaaagttgca aaactgcttg ctaagcgtgg gatcacccca gccgcttggg 2100 aagatggttt aatgtataac accacgacga cctttaaacg tgatgaattt ccaaatccac 2160 agtttttggt aaatacttgg gataatattt gggagtgggg cgttgcagac agagcccacc 2220 gttttgctaa caacaattac caggtcattt tgtctcacgg tactcatttg tactttgatc 2280 acccttacga agcgcaccct gaagagcgcg gctattattg ggcaactcgt tacacagata 2340 cgaaaaaagc attttcatat atgccagata atatttatgc gaatgcggac ttcacgcgaa 2400 accgtgagcc tatcgtgaat ctagaagcct tagttggtcg agagttaccc gcgcttaaaa 2460 gaccgcaaaa tatccttggt atgcaagggc aaatatggag tgagaccatt cgctcggaag 2520 accaagtgtt acgattgatt ttccctcgtt tgctttcgct tgcggagcgc gcttggcata 2580 aagcggattg ggaagggcgt cgtattaacc aaaaagagtt aaataaggac ttttcaacct 2640 ttgccgcagc cttgtcttta aaagaaattg caaagttaca aaacgatggc attaagccaa 2700 accttccggt tcctggtgcc aaggtggtgt tgggtaaact tgaagcgaat agtgctttcc 2760 cttatcttgc aattgaagtg agcttagaca atggcgaatc ttggcagcct tatactgatc 2820 agatgagtat ctcagatgaa agtaaggtat tgttgagaac gcgagccgga gaaaaaaata 2880 cgagccgtgt cacagggttg aaataaaccc tcgtattcag tttatcgcaa aaaagggcaa 2940 tggccctttt ttggtgataa ttttgctcaa attctaactg gtaatgaaat agattttaac 3000 gtaaagttaa atgtcagcgc tgtcattttt gtaaaaaaag cagtgagcaa agcaaaaaat 3060 aacaaggcaa aaagccatac aaacaataaa cgatg 3095 // |
|