 |
|
EBI DbfetchID AB042614; SV 1; linear; genomic DNA; STD; PRO; 2574 BP. XX AC AB042614; XX DT 18-MAY-2000 (Rel. 63, Created) DT 14-APR-2005 (Rel. 83, Last updated, Version 2) XX DE Aeromonas caviae xysA gene for beta-1,4-xylosidase with transcriptional DE regulator of AraC/XylS family, complete cds. XX KW . XX OS Aeromonas punctata OC Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; OC Aeromonadaceae; Aeromonas. XX RN [1] RP 1-2574 RA Ito H., Kitagawa E., Suzuki T., Kawai K.; RT ; RL Submitted (11-MAY-2000) to the EMBL/GenBank/DDBJ databases. RL Tohru Suzuki, Gifu University, Department of Biotechnology; 1-1 Yanagido, RL Gifu, Gifu 501-1193, Japan (E-mail:suzuki@cc.gifu-u.ac.jp, RL Tel:81-58-293-2909, Fax:81-58-293-2909) XX RN [2] RA Ito H., Kitagawa E., Suzuki T., Kawai K.; RT "Xylosidase gene(xysA) of Aeromonas caviae ME-1"; RL Unpublished. XX FH Key Location/Qualifiers FH FT source 1..2574 FT /organism="Aeromonas punctata" FT /strain="ME-1" FT /mol_type="genomic DNA" FT /db_xref="taxon:648" FT CDS 73..2310 FT /codon_start=1 FT /transl_table=11 FT /gene="xysA" FT /product="beta-1,4-xylosidase with transcriptional FT regulator of AraC/XylS family" FT /db_xref="GOA:Q9LBF2" FT /db_xref="HSSP:1UHV" FT /db_xref="InterPro:IPR000005" FT /db_xref="InterPro:IPR000514" FT /db_xref="InterPro:IPR009057" FT /db_xref="InterPro:IPR012287" FT /db_xref="InterPro:IPR013781" FT /db_xref="InterPro:IPR017853" FT /db_xref="InterPro:IPR018060" FT /db_xref="InterPro:IPR018062" FT /db_xref="UniProtKB/TrEMBL:Q9LBF2" FT /protein_id="BAA95685.1" FT /translation="MNNNAFISCNSALNVEQNAPHLQSIKQYLAQMVWEINKKTPGYQN FT FTMGRLQMLCGCLQRYFSSGTNSALEDGSRDYDYKRLNRVLTYIDLHYNEKITLQDMAH FT SEHLSLHYFSHFFTDKIGIPFQKYLTLIRLEKAQAQLAANDKNISEIALDCGFANVKLF FT NKYFKEKYGCTPGSYREASRTPELHQLNVNRKPKTYEESSSGDYYEMETLNAIGSLYRY FT LDVKVDAVQDTLSVPSAHLSDQTCIEIRADQTSSVYEKHWNMTMTAGRAIEGLREDWRK FT QLSALKGKVPFQNIRFHGIFNDEMMVYSENEQDIPLYNWSYVDKLYDFLLDQGVRPFVE FT LSFMPSQLARSKETLFWWRGNISPPSDPAKWQALVGEFVRHCLNRYGAEEVRQWYFEVW FT NEPDLAGVCWAGSKEEYFTFYESTVHAIKSILPELKVGGPAMGYGSLWNDTWAEEFLSY FT CRKREVALDFYSFHIYSEYPKLKVEDDRLTQIMPPAFYKESIALMRQKMNASSYGHVEL FT HVTEWNFSLYDRNLLHDTMFMAPFVIYHTMNTLGDVKAMAFWSFTDVFEESIVPASPFY FT GGFGLINRDGLNKPSYYAFELMQKLGDELMVKGDGYVGTRKRDGSMQFLFYHYVHVDQL FT FASGDWSELSSSTRYDVFEEKGSKAYELTLSNLEGPYKCTSYQLDREHGSVFDEWTRMG FT SPYSLTEEEIAYLNGRSGPVMGTEMIRDESWHREILLPPHGVMLLILDRQY" XX SQ Sequence 2574 BP; 724 A; 514 C; 649 G; 687 T; 0 other; atgtccgtcc acaagatcga acgaaccaat caggacaatg tgttattaac attgcagttc 60 ggtcctgagt tgatgaacaa taatgcgttt atctcctgta actctgcttt gaacgtggaa 120 caaaacgctc ctcacctgca aagtattaaa caatatcttg cgcaaatggt gtgggagatc 180 aacaaaaaaa cgccgggtta tcaaaatttc acaatgggca gattacagat gttatgcgga 240 tgcctgcaga ggtatttttc cagtggaacg aattccgcat tggaagacgg tagcagggat 300 tatgactata aaagactgaa cagggtcctc acatatattg atttacacta caatgagaag 360 attacactgc aggatatggc acattctgaa catttaagtt tgcattattt ctcccacttc 420 ttcaccgaca aaatcgggat acctttccaa aagtacttga cgctcattcg cttggagaag 480 gctcaggctc agctggcagc aaacgataaa aacatttcgg agatcgcgct ggattgcgga 540 tttgccaatg tgaagctgtt taacaaatac ttcaaggaaa agtacggctg tacgccaggt 600 tcctatcggg aagcttctcg tacaccggaa ctccatcagt tgaatgtgaa ccgcaaaccc 660 aaaacgtatg aggagtcttc aagcggagat tattacgaga tggaaacgtt gaatgcgatt 720 ggttcactgt atcgatatct ggatgttaag gttgatgccg ttcaggacac gctctctgta 780 ccgtctgcac atctgtcaga ccaaacttgt attgaaattc gtgcggatca gacgtcatct 840 gtctacgaaa agcactggaa tatgaccatg acggcaggga gagccattga aggtttgcgt 900 gaagattggc ggaagcagct ctcggcgctg aaaggaaaag taccttttca aaatattcga 960 tttcacggca tcttcaatga cgagatgatg gtgtacagcg agaacgagca ggacatcccc 1020 ctctataatt ggtcttatgt ggataagttg tatgatttcc tgctggatca gggcgttcgg 1080 ccatttgtgg aattaagttt tatgccgagc cagctggcaa gatccaaaga aacgctgttt 1140 tggtggagag ggaatattag cccaccatcc gaccctgcca agtggcaggc gcttgttggt 1200 gaattcgttc gccattgttt gaatcgttat ggggcggaag aagtgaggca gtggtatttc 1260 gaagtatgga acgagcctga cctggcgggt gtttgttggg caggaagcaa ggaagaatac 1320 tttacgtttt acgaatcgac cgttcatgcc atcaaatcaa ttctgccgga attgaaggtg 1380 ggggggccag ctatgggtta cggatctctc tggaacgata cctgggctga ggaatttttg 1440 tcctattgcc gcaagcggga agtggctctc gacttttatt cgttccacat ctattcggag 1500 tatccaaagc taaaagttga agatgatcgt ttaacgcaaa tcatgccgcc tgctttttat 1560 aaagagagta ttgcacttat gcggcaaaaa atgaatgcgt catcgtacgg tcatgttgaa 1620 cttcatgtca ccgagtggaa cttttcgctg tatgaccgta acttgctgca cgataccatg 1680 ttcatggctc cgtttgtcat ttaccacacc atgaacacac tcggtgacgt gaaagcgatg 1740 gctttctggt cctttaccga tgtattcgaa gaaagtatcg ttcccgcttc tcctttctac 1800 ggaggttttg gcctgattaa ccgcgatggg ctgaataaac ccagctatta tgcatttgag 1860 cttatgcaaa agcttgggga tgagctgatg gtcaagggag acggttatgt cggaacccga 1920 aaaagggatg gaagcatgca atttttgttc tatcactatg ttcacgtaga ccagctgttt 1980 gcaagtggag attggtcgga attatccagc tcaacccgct atgacgtatt tgaggaaaaa 2040 ggcagcaaag cttatgaact taccctgagc aatctcgagg gcccttacaa atgcaccagt 2100 tatcaacttg atcgggagca tgggtcggta tttgatgagt ggacccgcat gggatcgccc 2160 tactccttga cggaagaaga aatcgcctat ctaaacggca ggagtggacc cgtgatgggg 2220 acagagatga ttagagatga aagttggcac agagaaattt tgcttccacc gcatggggta 2280 atgctgctca ttttggatag acaatattaa aaaaaaagta ctcttaaggc atcctttcag 2340 tattgaaggg atgttttttg ttgtttattt cttgttcagg ctggcaagct agaacaatag 2400 cgatgaatta ggcaaaaaac gatccatgat gcggcaattt ccaacaagaa agcgttaaca 2460 caaatcgata tactatggtt gtggcagctt agaagaagac aggggagttt gatgaaccgt 2520 tatgaaaggt gcaaatcgtt gcgccaaatt gggggggtta caaaaaattg ggtt 2574 // |
|