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EBI DbfetchID AB039953; SV 1; linear; genomic DNA; STD; PRO; 2594 BP. XX AC AB039953; XX DT 13-APR-2002 (Rel. 71, Created) DT 13-APR-2002 (Rel. 71, Last updated, Version 1) XX DE Alcaligenes sp. XY-234 3xynAlc gene for beta-1,3-xylanase, complete cds. XX KW beta-1,3-xylanase. XX OS Alcaligenes sp. XY-234 OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Alcaligenaceae; Alcaligenes. XX RN [1] RP 1-2594 RA Araki T., Okazaki F.; RT ; RL Submitted (09-MAR-2000) to the EMBL/GenBank/DDBJ databases. RL Toshiyoshi Araki, Mie University, Faculty of Bioresources; Kamihama 1515, RL Tsu, Mie 514-8507, Japan (E-mail:araki@bio.mie-u.ac.jp, Tel:81-59-231-9561, RL Fax:81-59-231-9557) XX RN [2] RX DOI; 10.1128/JB.184.9.2399-2403.2002 RX PUBMED; 11948152. RA Okazaki F., Tamaru Y., Hashikawa S., Li Y.T., Araki T.; RT "Novel carbohydrate-binding module of beta-1,3-xylanase from a marine RT bacterium, Alcaligenes sp. strain XY-234"; RL J. Bacteriol. 184(9):2399-2403(2002). XX FH Key Location/Qualifiers FH FT source 1..2594 FT /organism="Alcaligenes sp. XY-234" FT /strain="XY-234" FT /mol_type="genomic DNA" FT /db_xref="taxon:118970" FT CDS 1018..2427 FT /codon_start=1 FT /transl_table=11 FT /gene="3xynAlc" FT /product="beta-1,3-xylanase" FT /db_xref="GOA:Q8RS40" FT /db_xref="InterPro:IPR013781" FT /db_xref="PDB:2COV" FT /db_xref="UniProtKB/TrEMBL:Q8RS40" FT /protein_id="BAB88993.1" FT /translation="MKKLAKMISIATLGACAFSAHALDGKLVPNEGVLVSVGQDVDSVN FT DYSSAMSTTPAGVTNYVGIVNLDGLASNADAGAGRNNVVELANLYPTSALIVGVSMNGQ FT IQNVAQGQYNANIDTLIQTLGELDRPVYLRWAYEVDGPWNGHNTEDLKQSFRNVYQRIR FT ELGYGDNISMIWQVASYCPTAPGQLSSWWPGDDVVDWVGLSYFAPQDCNWDRVNEAAQW FT ARSHNKPLFINESSPQRYQLADRTYSSDPAKGTNRQSKTEQQIWSEWFAPYFQFMEDNK FT DILKGFTYINADWDSQWRWAAPYNEGYWGDSRVQVLPYIKQQWQDTLENPKFINHSSDL FT FAKLGYVADGGDNGGDNGGDNGGDNGGDNGGDNGGTEPPENCQDDFNFNYVSDQEIEVY FT HVDKGWSAGWNYVCLNDYCLPGNKSNGAFRKTFNAVLGQDYKLTFKVEDRYGQGQQILD FT RNITFTTQVCN" XX SQ Sequence 2594 BP; 734 A; 506 C; 674 G; 680 T; 0 other; gacagcatat tgaagagttt ctcccagggc cccaagcgat taaccggaaa ccttccgttt 60 ccagagatgg caggcttggc ttctaatgcg attcaaccga gttgtacgca atgtcacaag 120 ctaaatggcg tgggcgtcat gcagagaggg caagatgtca ttccacctaa aatgatcggc 180 atggggctac tggaaaacat tcctagcgat atcattgagc aatgggcaca agagaatggt 240 ggaaccgtta attatgtcat ggtcaatggc caacaacagg tgggccgttt tgggtggaga 300 gcagaagcgg taagtgtgag gcaccaagta gctaaagcac tgcatgatga catggggatt 360 ggcagtaact ttgagggctt tctacccgcc gacattgatg atcagcattt tgatgacatg 420 gaaacctata ccaagttaat tgcagtacca acaccaagag caaacttaac atcgcttgcc 480 ggccacacac gttttcaaga atttggctgt gacagttgcc ataagttgac cgtaacacgg 540 gcgtggattc agacttccca gaattaagca accaaaccat acacccatac accgatttac 600 ttcttcatga tttaggagag ggagcattcc gcacggcgcc tttatgggga atcggtttaa 660 cgggttatgt tcaatctggc gatgccaatg ctctaacgtt aatgcacgat ggacaagcaa 720 ccagcattga gcaagtaatg cagcgccaca atggggctgc ggcaacacaa tcgagcgcct 780 actttaacgc gacgcaacaa caaagggagc aattgcatac gtacttaatg gcgctgtagg 840 tgtgtctggc tctgtttaat aagagccagg tatttagaaa agcaatctta atgtttctcg 900 aagagctttt gtcgttagta tttgtgtgaa ggtaagtggt attcgcttag gcagtacgca 960 cgttgtggta ttaaaaagct cattaataat cgtcgatact taaaaggaag aaattcgatg 1020 aaaaagttag caaaaatgat ctcaatcgca acactcggcg cttgtgcatt tagtgctcat 1080 gcacttgatg gcaagctggt tccaaatgaa ggggttttgg tttcagttgg gcaagatgtc 1140 gatagtgtca atgattacag tagtgcgatg tctacaacgc ctgctggggt aacgaactac 1200 gttggtatcg tcaacctaga tgggctagcg agcaatgctg atgcaggggc agggcgaaac 1260 aatgttgttg agttggctaa cctatacccg accagtgcgc tgattgtagg cgtgtcaatg 1320 aatgggcaaa ttcaaaacgt tgctcaaggg caatataacg ccaacattga tactttgatc 1380 cagacgctag gtgagttaga cagaccggta tacctaagat gggcctatga ggttgatggt 1440 ccatggaatg ggcacaatac cgaagatcta aaacagagtt tccgcaacgt ttatcaacgt 1500 attcgcgagt taggttacgg cgacaatatt tcaatgattt ggcaagtggc ttcttattgt 1560 ccaacggcac cgggtcagct atcgagctgg tggcctggtg atgacgttgt tgactgggtt 1620 ggcctgtctt acttcgcacc tcaagattgt aactgggacc gagtgaatga agcggcacag 1680 tgggcccgtt ctcataataa gcctctgttt attaatgaat cttctccgca gcgatatcag 1740 ttagcagata gaacgtattc ttctgaccct gcaaaaggaa ccaatcgtca gtctaagact 1800 gaacaacaaa tatggtcaga atggttcgcg ccttacttcc agtttatgga ggacaacaaa 1860 gatatcttga aaggctttac ctacattaat gcggattggg atagtcaatg gcgttgggct 1920 gcaccgtaca atgaagggta ttggggcgac agtagagtac aagtgttgcc gtacattaag 1980 caacaatggc aagacacgtt ggagaaccca aaattcatta atcattcatc tgatctcttt 2040 gccaagttgg gctatgttgc tgacggtggt gataatggcg gcgacaacgg tggtgataac 2100 ggtggcgata acggcggtga taatggcggt gataatggcg gaactgagcc accagagaat 2160 tgccaagatg actttaattt taactatgtt tctgaccagg aaatcgaagt ttatcatgta 2220 gataaaggtt ggagtgcagg ctggaactat gtatgtttga atgattactg tttaccaggc 2280 aataagtcta atggcgcttt tcgtaaaacg ttcaacgctg tgttaggaca agattacaaa 2340 ctgacgttta aagtagaaga tcgttatggt cagggacagc agatccttga tagaaacatt 2400 acgtttacta ctcaggtatg taattaattt tggggcggta aagtgaccta gaattgagcg 2460 ttagaggtat tgtttgattt agcgttaggt tgattggtaa acaaaaaccc ggtagacgat 2520 accgggtttt cgttgtgtgg gtaaacccgt gtttctaact gtgtgtaagg tgcctttaac 2580 gacgggttca tccc 2594 // |
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