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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AB037372; SV 1; linear; genomic DNA; STD; PRO; 1851 BP.
XX
AC   AB037372;
XX
DT   07-JUN-2000 (Rel. 64, Created)
DT   31-AUG-2001 (Rel. 68, Last updated, Version 2)
XX
DE   Citrobacter freundii melA, melB genes for alpha-galactosidase, melibiose
DE   transporter, partial and complete cds.
XX
KW   alpha-galactosidase; melibiose transporter.
XX
OS   Citrobacter freundii
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
OC   Enterobacteriaceae; Citrobacter.
XX
RN   [1]
RP   1-1851
RA   Shimamoto T., Shimamoto T.;
RT   ;
RL   Submitted (21-JAN-2000) to the EMBL/GenBank/DDBJ databases.
RL   Tadashi Shimamoto, Hiroshima University, Faculty of Applied Biological
RL   Science; Kagamiyama 1-4-4, Higashi-Hiroshima, Hiroshima 739-8528, Japan
RL   (E-mail:tadashis@ipc.hiroshima-u.ac.jp, Tel:81-824-24-7897,
RL   Fax:81-824-22-7067)
XX
RN   [2]
RX   PUBMED; 11275561.
RA   Shimamoto T., Shimamoto T., Xu X.J., Okazaki N., Kawakami H., Tsuchiya T.;
RT   "A cryptic melibiose transporter gene possessing a frameshift from
RT   Citrobacter freundii";
RL   J. Biochem. 129(4):607-613(2001).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1851
FT                   /organism="Citrobacter freundii"
FT                   /strain="M4"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:546"
FT   CDS             <1..106
FT                   /codon_start=2
FT                   /transl_table=11
FT                   /gene="melA"
FT                   /product="alpha-galactosidase"
FT                   /db_xref="UniProtKB/TrEMBL:Q9KWG7"
FT                   /protein_id="BAA96419.1"
FT                   /translation="DPHTAAVLGIEEIYALVDDLIASHGDWLPAWLHR"
FT   CDS             join(199..453,458..1630)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="melB"
FT                   /product="melibiose transporter"
FT                   /db_xref="GOA:Q9KWG6"
FT                   /db_xref="InterPro:IPR018043"
FT                   /db_xref="UniProtKB/TrEMBL:Q9KWG6"
FT                   /protein_id="BAA96420.1"
FT                   /translation="MSISLTTKLSYGFGAFGKDFAIGIVYMYLMYYYTDVVGLSVGVVG
FT                   TLFLVAKIWNAFNDPVMGWIVNATRSRWGKFKPWILLGTLNSLVLFLLFSAHLFEGTAQ
FT                   VVFVCVTYILWGMTYTIMDIPFWSLVPTITLDKREREQLVPYPRFFASLAGFVTAGVTL
FT                   PFVNYVGGADRGFGFQMFTLVLIAFFIVSTLVTLRNVHEVYSSDSEATADSTRLTLKSI
FT                   LALIYKNDQLSCLLGMALAYNVASNIITGFAIYYFTYVVGDADLFPYYLSYAGAANLLT
FT                   LILFPRLSKALSRRVLWAGASVMPVLSAGVLLIMALGAFHNTFLIVTAGILLNIGTALF
FT                   WVLQVIMVADTVDYGEYKFNVRCESIAYAVQTMVVKGGSAFSAFFIAVVLGLIGYVPNA
FT                   TQSAETILGMQFIMIALPTLFFVVTLVLYFRYYRLNGDMLRKIQIHLLDKYRKVPSPVK
FT                   QSNTPEIPVVVASDVKA"
FT   variation       454..457
FT                   /note="frame-shift mutation"
XX
SQ   Sequence 1851 BP; 360 A; 450 C; 507 G; 534 T; 0 other;
     ggatccgcat accgccgcgg tactggggat tgaagagatt tatgcgctgg tggacgacct        60
     gatcgcgtct cacggcgact ggctgccggc ctggctgcac cgttaataca caatcacgcc       120
     gggcagagca tccggcgttt aacctctgac gtttcctctt acagaaggcg ggcgctggta       180
     acagcgaccc gataccctat gagcatctct ctgacaacaa aactcagtta cggatttgga       240
     gcgttcggta aggatttcgc tatcggtatt gtgtacatgt atctgatgta ttactacacc       300
     gacgtggtgg gattatcggt gggcgtcgtc ggaaccttgt tcctggtggc aaaaatatgg       360
     aacgcgttta acgatccggt gatggggtgg atagtgaatg ccacccgatc gcgctgggga       420
     aaatttaaac cctggatttt actcggtacg ctgagcgaac tcattggtgc tgtttttgct       480
     ttttagcgca catctttttg agggtactgc gcaggtcgta tttgtttgcg tgacgtatat       540
     tttatgggga atgacctaca ccattatgga tattccattc tggtcactgg tgccaaccat       600
     tacgctggat aaacgcgagc gtgaacaact ggtgccgtat ccccgtttct tcgccagcct       660
     tgccgggttt gtcaccgcgg gcgtgacgct accctttgta aactatgttg gcggcgcgga       720
     tcgcgggttc ggttttcaga tgtttacgct ggtgctgatc gcatttttta ttgtttctac       780
     cctcgtaacc ttgcgcaatg tgcatgaagt gtattcctct gacagcgaag ctaccgcaga       840
     cagcacccgg ctgacgctga aatcaatcct tgcgcttatc tacaaaaacg atcagctttc       900
     ctgcctgctg gggatggcgc tggcttacaa cgtggcgtcc aatatcatta caggttttgc       960
     gatttactac ttcacctacg tggtgggtga tgctgacctt ttcccatact acctctccta      1020
     tgccggagca gctaacttgc tgacattgat tctctttccc cgtctgtcaa aggcgctttc      1080
     tcgccgggta ctgtgggctg gcgcttcggt tatgccagtt ctcagcgcag gcgtattgct      1140
     gattatggct ctgggggcat tccacaatac tttcctgatt gttaccgcag ggatccttct      1200
     gaacattggt acggcgctgt tctgggtact gcaggtgatt atggtggcgg acaccgtaga      1260
     ttacggtgaa tacaagttta acgtccgctg cgagagtatt gcctatgccg tgcagacaat      1320
     ggtggtcaaa ggtggctcgg cgttttccgc tttctttatt gcggtggtgc tgggattgat      1380
     tggttatgtt ccgaatgcga cgcaatctgc tgagaccatc ctcggcatgc agttcatcat      1440
     gatcgcgctg cccacgcttt ttttcgttgt gacactggtg ctctatttcc gttactaccg      1500
     gttgaatggc gatatgctgc gtaagattca gatccacctg ctggataagt accgaaaagt      1560
     gccgtcgccc gtcaaacagt cgaatactcc ggagattccg gtggtagtgg ccagcgatgt      1620
     gaaggcctag ctatggagtg gcattcctgg attggctatc tggcggcaac gctgacgacg      1680
     ctctcttttt tgccgcaggc gattaaggtt attaccaccc gcaacaccca gggtatctcc      1740
     ggtttaatgt atgtgatgtt tgtgtgcggg ctggtgttgt ggctggctta tgggttattg      1800
     attgaagata ccgctgtcag catggcgaac tttctgacac tgttgttcgc c               1851
//
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