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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AB036736; SV 1; linear; genomic DNA; STD; PRO; 2000 BP.
XX
AC   AB036736;
XX
DT   14-JAN-2000 (Rel. 62, Created)
DT   14-APR-2005 (Rel. 83, Last updated, Version 2)
XX
DE   Mycobacterium smegmatis araD, araA genes for L-arabinose isomerase,
DE   L-ribulose 5 phosphate 4-epimerase, partial and complete cds.
XX
KW   L-arabinose isomerase; L-ribulose 5 phosphate 4-epimerase.
XX
OS   Mycobacterium smegmatis
OC   Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales;
OC   Corynebacterineae; Mycobacteriaceae; Mycobacterium.
XX
RN   [1]
RP   1-2000
RA   Soda A., Takata G., Izumori K.;
RT   ;
RL   Submitted (07-JAN-2000) to the EMBL/GenBank/DDBJ databases.
RL   Akane Soda, Kagawa University, Faculty of Agriculture; Ikenobe 2393, Miki,
RL   Kagawa 761-0795, Japan (E-mail:akane.souda@nifty.ne.jp,
RL   URL:http://www.kagawa-u.ac.jp/, Tel:81-87-891-3106, Fax:81-87-891-3106)
XX
RN   [2]
RP   1-2000
RA   Soda A., Takata G., Izumori K.;
RT   "Mycobacterium smegmatis SMDU araD gene,partial cds and araA gene,complete
RT   cds";
RL   Unpublished.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2000
FT                   /organism="Mycobacterium smegmatis"
FT                   /strain="SMDU"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:1772"
FT   CDS             <1..436
FT                   /codon_start=2
FT                   /transl_table=11
FT                   /gene="araD"
FT                   /product="L-ribulose 5 phosphate 4-epimerase"
FT                   /db_xref="GOA:Q9RHG3"
FT                   /db_xref="HSSP:1JDI"
FT                   /db_xref="InterPro:IPR001303"
FT                   /db_xref="UniProtKB/TrEMBL:Q9RHG3"
FT                   /protein_id="BAA89427.1"
FT                   /translation="HAYVYRHMPEVGGVVHTHSTYATAWAARGEAIPCVLTMIADEFGG
FT                   DIPVGPFALIGDDSIGRGIVETLQHSNSRAVLMRNHGPFTVGRDARDAVKAAVMVEDVA
FT                   RTVHISRQLGTPDVIPPADVRRLFDRYQNVYGQPQASQEG"
FT   CDS             439..1944
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="araA"
FT                   /product="L-arabinose isomerase"
FT                   /db_xref="GOA:Q9RHG2"
FT                   /db_xref="InterPro:IPR003762"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q9RHG2"
FT                   /protein_id="BAA89428.1"
FT                   /translation="MAEHFTDEEIWFVTGSQSLYGQEILDQVAEQSRALAERLDASADL
FT                   PVAVRWKPVVTTSEAILDVLRDASSSPQCVGVITWMHTFSPAKMWIRGLSALQKPMLHL
FT                   HTQFGVEIPWDTIDMDFMNLNQAAHGDREFGYIQTRLSVPRTTVAGHVGDPRTTARIGS
FT                   WMRAALGAAELRSLRIARFGDNMRDVAVTEGDKVEAESHFGVSVNTYSVNDLAKAVYDV
FT                   SDPEIDKLVQEYEDTYAVAEELRRGGERHASLREGARIELGLRHFLADGFGAFTTNFED
FT                   LGDLRQLPGLAVQRLMADGFGFGAEGDWKTSAMVRTVKTMGVGLPGGTSFMEDYTYDLT
FT                   PGSERILGAHMLEVCPSIAGQTPSLEVHPLGIGNREDPVRLRFTAAPGSGVVLGICDMG
FT                   SRFRLVANHVTVVEPSAPLPNLPVACAVWEPEPSWSTSTEAWLMAGGPHHTVLTTAVSP
FT                   TTLDDFATITGTELLQIDQHTTPREFQREMRWNAVYHHIAAGL"
XX
SQ   Sequence 2000 BP; 335 A; 700 C; 662 G; 303 T; 0 other;
     gcatgcctac gtgtaccggc acatgcccga ggtcggcggc gtcgtgcaca cccactccac        60
     ctatgccacg gcgtgggcgg cgcgcggcga ggcgatcccg tgcgtgctca cgatgatcgc       120
     cgacgagttc ggcggcgaca tcccagtggg gccgttcgca ctgatcggcg acgactcgat       180
     cgggcgggga atcgtggaga ccctgcagca cagcaactct cgcgccgtgc tgatgcgcaa       240
     ccacggtccg ttcacggtcg ggcgcgatgc gcgcgacgcg gtcaaggccg ccgtgatggt       300
     cgaggacgtc gcgcgcacgg tccacatcag ccgccaactc ggcacccccg atgtgatccc       360
     cccggccgat gtccgccggc ttttcgaccg ctatcagaac gtctacgggc aaccgcaggc       420
     cagtcaggaa gggtgacggt ggccgaacac ttcaccgatg aggaaatctg gttcgtcaca       480
     ggcagccagt cgttgtacgg ccaggagatc ctggaccagg tcgccgagca gtcacgggca       540
     ctggccgaac gcctggacgc cagcgcggat ctgcctgtgg ccgtgcggtg gaagcccgtg       600
     gtgaccacca gcgaggccat cctcgacgtc ctgcgcgacg cgagttcgtc cccgcagtgc       660
     gtcggcgtga tcacgtggat gcacacgttc tcgccggcca agatgtggat ccgcggcctg       720
     agcgcgctgc agaagcccat gctgcacctg cacacgcagt tcggggtcga aatcccatgg       780
     gacaccatcg acatggattt catgaacctc aaccaggccg cacacggcga ccgcgagttc       840
     gggtacatcc agacccggct ttcggtgccg cgcaccaccg tcgccgggca cgtcggcgac       900
     ccgcgcacca cggcacgcat cggatcgtgg atgcgcgcgg cgctcggggc ggccgagttg       960
     cggtcgctgc gcatcgcgcg tttcggcgac aacatgcgtg acgtcgcggt caccgagggc      1020
     gacaaggtcg aggccgaatc gcacttcggc gtctcggtca acacctactc ggtgaacgac      1080
     ctcgccaagg ccgtgtacga cgtcagcgac cccgagatcg acaagctggt acaggaatac      1140
     gaggacacct acgcggtggc cgaggaactg cgccgcggcg gcgaacgcca cgcgtcgctg      1200
     cgcgaaggcg cccgcatcga actgggcttg cggcacttcc tggccgacgg cttcggcgcg      1260
     ttcaccacca acttcgagga cctcggcgat ctgcgccaac tgcccggcct ggccgtgcag      1320
     cggttgatgg ccgacggttt cgggttcggc gccgaaggcg actggaagac ctcggcgatg      1380
     gtgcgcacgg tcaagaccat gggtgtgggc ctgcccggtg gcacgtcgtt catggaggac      1440
     tacacctacg acctgacacc gggatccgaa cgcatcctgg gcgcgcacat gctggaggtc      1500
     tgccccagca tcgcgggcca gacgcccagc ctggaagtcc atccgctggg catcggcaac      1560
     cgtgaggacc cggtccgtct gcgcttcacc gcggccccgg gttccggtgt ggtgctcggt      1620
     atctgcgaca tgggttcacg gttccggttg gtggccaacc acgtcacggt cgtcgaaccg      1680
     tccgcgccgc tgcccaatct gccggtcgcg tgcgcggtgt gggagcccga gccgtcgtgg      1740
     tcgacgtcga cggaggcctg gctcatggcg ggcggcccgc accacacggt gctcaccacg      1800
     gccgtctcgc cgaccacgct cgacgacttc gccaccatca ccggcaccga gctgctgcag      1860
     atcgaccagc acaccacccc gcgtgagttc cagcgcgaga tgcgctggaa cgcggtctac      1920
     caccacatcg ccgccggcct ctaggtctct gtaggtcacc cagcaccgcg aggtcaccca      1980
     gcaccgcgag gtcaccccag                                                  2000
//
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