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EBI DbfetchID AB029043; SV 2; linear; genomic DNA; STD; PRO; 4405 BP. XX AC AB029043; XX DT 18-APR-2000 (Rel. 63, Created) DT 19-APR-2000 (Rel. 63, Last updated, Version 2) XX DE Vibrio sp. XY-214 txyA gene for endo-1,3-beta-xylanase, complete cds. XX KW . XX OS Vibrio sp. XY-214 OC Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; OC Vibrio. XX RN [1] RP 1-4405 RA Araki T., Hashikawa S.; RT ; RL Submitted (16-JUN-1999) to the EMBL/GenBank/DDBJ databases. RL Toshiyoshi Araki, Mie University, Faculty of Bioresources; Kamihama 1515, RL Tsu, Mie 514-8507, Japan (E-mail:araki@bio.mie-u.ac.jp, Tel:81-59-231-9561, RL Fax:81-59-231-9557) XX RN [2] RX DOI; 10.1128/AEM.66.4.1741-1743.2000 RX PUBMED; 10742274. RA Araki T., Hashikawa S., Morishita T.; RT "Cloning, sequencing, and expression in Escherichia coli of the new gene RT encoding beta-1,3-xylanase from a marine bacterium, Vibrio sp. strain RT XY-214"; RL Appl. Environ. Microbiol. 66(4):1741-1743(2000). XX CC Sequence updated (17-Apr-2000) XX FH Key Location/Qualifiers FH FT source 1..4405 FT /organism="Vibrio sp. XY-214" FT /strain="XY-214" FT /mol_type="genomic DNA" FT /db_xref="taxon:98227" FT CDS 2457..3839 FT /codon_start=1 FT /transl_table=11 FT /gene="txyA" FT /product="endo-1,3-beta-xylanase" FT /db_xref="GOA:Q9LCB9" FT /db_xref="InterPro:IPR013781" FT /db_xref="InterPro:IPR017853" FT /db_xref="PDB:2DDX" FT /db_xref="UniProtKB/TrEMBL:Q9LCB9" FT /protein_id="BAA94698.1" FT /translation="MKKLAKMISVATLGACAFQAHALDGKLVPDQGILVSVGQDVDSVN FT DYSSAMGTTPAGVTNYVGIVNLDGLSTDADAGAGRNNIVELANQYPTSALIVGVSMNGE FT VQNVANGQYNANIDTLIRTLGEFDRPVYLRWAYEVDGPWNGHNTEDLKQSFRHVYQRIR FT ELGYADNISMVWQVASYCPTAPGQLGTWWPGDDVVDWVGLSYFAPQDCNWDRVNEAAQW FT ARSHNKPLFINESSPQRYQLADLTYSTDPAKGTNRQAKTDQQIWSEWFEPFFQFMVDNQ FT DILKGFTYINADWDSQWRWAAPYNEGYWGDSRVQVIPYIKQKWQETLSDPKFIRHSDEL FT FAQLGYGNSDGGNGGDNGGDNGGDNGGETPENCTDDFNFNYVSDNEIEVYHVDKGWSAG FT WNYLCLDDYCLSGTKSNGAFSRSFSAQLGQTYKMTFKVEDITGQGQQIIDKTVTFTNQV FT CN" XX SQ Sequence 4405 BP; 1183 A; 949 C; 1122 G; 1151 T; 0 other; tctagattgc atggaatagc tctattgtct ttttcgttat tttccgccat ggcgagtgcc 60 gagatcacca cttcaattgc aagtggcagt cccgggacag ttatggcaga agatggtggc 120 tggaccggta attggagtta cctatgtgtt gatgaccact gtgcgtcggc gcagctagtc 180 aacggttttt ggcaaaggca agtgactgaa aaaaatgtca tttcaggtca aacgtacaaa 240 gtccaattga aagtgcaaga taacacactg tcacaataca tttctccaga gtacctctta 300 acagccgacg agggctcatc tggcggtggt ggtactgaac cacccgttga tggccaagcg 360 ccgaccgtcg atatctccat cacaccaagc tcaccaagag tgggtgaaac ggtacaagtc 420 tcggttcaag caggcagtga atcgaacgca attaaccaac taattcttca gataacagca 480 ccatctgggc aagttatttc gactaccgac tacccgaatg cgagcgcaca gcagtcgttt 540 gtagcggaag agcaaggcgg gtaccaagtg cttgcaacgg caaccgatac tcaaggtgag 600 agcacgcaaa gagtcgcaac cgttaatgta aggcaggacg tggttgctgg taatggtgtt 660 gtcacgcatg aaattgcaga gcgttatcgt gtgcgtcacg aactttctac taatgacttt 720 aataatttca atattgaata ctgggaaggt cgttttggct ctttcgtatt gcaagactat 780 acgttacagg aagcagcaag cttaagacag caagcgtgtg ggacaaccga accttgtgtt 840 gtcgtcacgt tatcaagtgc cattccaatg gctatgacag attccgcggg cagcgaaaag 900 tcgtgtaatc aacagtcgcc taactggcgg tatcataaat attatggtga cgagacgaat 960 ttcgaatatg gctatgtaat ggatgtagtt ttgcctgatg gtcgaatcgt acctgcttgt 1020 gaagcaagtc gttcgcagcg tgcttcggca accacttggc gtgcagtgat gcagcgttgg 1080 ccacatatta accgtccttt ctcggccggt gagcagattg agttcgagac cacgataagc 1140 tttaatcgag cgcaaacgac aggcgataat gtcaactact acggacagac ttttaagtat 1200 gttctggggc aaggtttaac ggtcaataat ggtgattcgg cctctgggcc tacgggcatc 1260 aatgatagct ttgcgcaatt aggcgggtat acaacggtgc ctcagctctc agcaacgggc 1320 gggcaacagc aacgtctaag cttcatgcag catgcctata acctcgaccg aaataacgtt 1380 cagccttggt tagatggccg ccgcctgatt catacagatt ttaatacggg taaccacgtg 1440 gaagagtttt taccaggccc acaagcgata aacggaaatc tcccttttcc tgagcttgct 1500 ggtatcgctt ctaatccaat tcaaccgagc tgtactcagt gtcataccct aaatggtgtt 1560 ggtgtgatgc aagatcgcca agatgttgtt ccacccaaaa tgattggcat gggactgctt 1620 gaaaacattc ctcggaacac aattgagcaa tgggcgcaag agaatggggg tacggttaat 1680 tacgtcacgg tcgaaggaca agagcgtgtc ggccgatttg gttggagagc ggaagcaacc 1740 tccgttaggc accaagtagc taaagctcta cacgacgata tgggtattgg caccaacttt 1800 gaagggtttg aacctgcaac attagcagat caacaccttg atgatatgga aacgtacaca 1860 aagctgattg cggtaccaac acctggtagt aacctgacca cgctacctgg acatgaccga 1920 ttccaagagt tcggctgtga cagttgccat aaacttactg tggtgacggg aactgatcct 1980 gattttccag agctgagtaa ccaaaccatt cacccgtaca ccgacttgct gctccatgat 2040 ttgggcgagg ggcaattccg aactgcgccg ttatggggga taggtttaac tgggtacgta 2100 caaagtggca ataccaatgc gttaacactc atgcatgacg gtcaagcagc gagcgttgag 2160 gccgtgatgc agcgacacaa tggggatgcg gctgaccaat cgtctgcata cttcagtgcc 2220 acaccacaac aacgtgagca gttgattgct tacctaatgg ctctatagca cgccaaaaac 2280 gcttcatgtt attgatcatg aagcgtttag tcgcgtgatt tatctgtccg attctcaaag 2340 agtttttgtc gttagtatca gtgtggaagc tttgtcgtca aggtacgcat ggtgcacacg 2400 tcgttgttct aaaaagctcg atttttaatc gtcgatactc ataaggaaga aattcgatga 2460 aaaaactagc aaaaatgatc tctgttgcaa cgttaggtgc ctgtgcattt caggctcatg 2520 cccttgatgg aaaacttgta ccagaccaag gaatcctggt ttctgtcggt caagacgtag 2580 acagtgtgaa tgactacagc agtgcaatgg gcacaacacc cgctggagtg acaaactacg 2640 taggtattgt aaatcttgat ggtttatcaa cggatgccga tgccggagcc ggtagaaaca 2700 acatcgttga gttagcgaat cagtacccaa caagcgcatt gatcgttggt gtgtccatga 2760 atggcgaagt gcagaatgtc gctaatggcc agtacaacgc taatatcgac accttgattc 2820 gaacgcttgg tgaattcgat aggcctgttt atttacgttg ggcctatgaa gtcgatggtc 2880 catggaatgg gcacaacacc gaggatttaa aacaaagctt tagacatgtg tatcaacgca 2940 ttcgcgaact tggctatgca gataatatct caatggtttg gcaggttgcg tcatattgtc 3000 ctactgcccc aggccaactg ggtacttggt ggcctggtga tgatgtggtg gattgggtag 3060 gtttgtctta ttttgccccg caagattgta actgggaccg tgtaaatgaa gcggctcaat 3120 gggcgcgttc tcataacaaa cctctgttca ttaatgagtc gagccctcag cgataccagc 3180 ttgcagacct gacttactct actgaccctg cgaaaggtac taatcgccaa gcgaaaacag 3240 atcaacaaat ttggtctgag tggtttgaac cctttttcca gttcatggta gacaatcaag 3300 atatcttgaa gggctttact tacattaatg ctgactggga tagtcagtgg cgatgggctg 3360 caccatataa cgaaggctat tggggtgaca gtcgagtgca agttattcca tacatcaaac 3420 agaagtggca agaaacattg tcagatccta agtttattcg acattcagat gaattgtttg 3480 ctcagctcgg gtatggcaat tcagacggag gtaatggtgg tgacaacggc ggtgataacg 3540 gcggtgataa cggaggcgag acacctgaaa attgtactga tgactttaac ttcaattatg 3600 tctcagataa tgaaatagag gtctaccatg tggataaagg ctggagtgct ggttggaatt 3660 atctgtgttt agatgattat tgtttatctg gaactaagtc aaacggtgcg ttcagccgct 3720 ctttttctgc ccagttaggg caaacctaca agatgacatt taaggtagaa gacatcacgg 3780 gacaaggtca gcagatcata gacaaaacag tgacgttcac aaatcaagta tgtaactagt 3840 ctccgggttt cgttacgaca aataaaaacc cggctatagt tgccgggttt ttcttggatt 3900 aatgattaag cgacaggttc atcccatagg ttttctagcg tataagggct gccttctaat 3960 gcccagaatt cgccagctag gtagcggtag ttaaggtcta gcttctgtat atcagccatg 4020 ttttccgttg tcaggttcac ttcctgagcg ttgaggttaa gctgctgtcg ctctgggttt 4080 gcagacttag ggatcatgac aatgtttcgc tgtaaacccc atgcaatcaa cacttgtgcc 4140 ggagtcactg aatgctcatt ggcaatggat tggataagag ggtgatctag gagggttggc 4200 tcattctcac ttgtgagcag ttcaggtcgg tctccagatc ctaacggcgc ataagcggtt 4260 accgcaattc cttgtgagtg gcagtagtcg ataagctctt gctgctgtag gtaggggtgc 4320 atctcaactt ggttcattat cggttggatt aaacagttgc cttttaaatg gtgcagcttt 4380 ttagcactga aattggagac accaa 4405 // |
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