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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AB026561; SV 1; linear; mRNA; STD; PLN; 1056 BP.
XX
AC   AB026561;
XX
DT   30-JUN-2000 (Rel. 64, Created)
DT   15-FEB-2008 (Rel. 94, Last updated, Version 4)
XX
DE   Oryza sativa Japonica Group OsPAE1 mRNA for alpha 5 subunit of 20S
DE   proteasome, complete cds.
XX
KW   alpha 5 subunit of 20S proteasome.
XX
OS   Oryza sativa Japonica Group
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP clade;
OC   Ehrhartoideae; Oryzeae; Oryza.
XX
RN   [1]
RP   1-1056
RA   Sassa H., Hirano H.;
RT   ;
RL   Submitted (23-APR-1999) to the EMBL/GenBank/DDBJ databases.
RL   Contact:Hidenori Sassa Yokohama City University, Kihara Institute for
RL   Biological Research; Maioka 641-12, Totsuka, Yokohama 244-0813, Japan
XX
RN   [2]
RX   DOI; 10.1016/S0378-1119(00)00190-6
RX   PUBMED; 10854779.
RA   Sassa H., Oguchi S., Inoue T., Hirano H.;
RT   "Primary structural features of the 20S proteasome subunits of rice (Oryza
RT   sativa)";
RL   Gene 250(1-2):61-66(2000).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1056
FT                   /organism="Oryza sativa Japonica Group"
FT                   /cultivar="Nipponbare"
FT                   /mol_type="mRNA"
FT                   /db_xref="taxon:39947"
FT   CDS             94..807
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="OsPAE1"
FT                   /product="alpha 5 subunit of 20S proteasome"
FT                   /db_xref="GOA:Q9LSU1"
FT                   /db_xref="HSSP:1RYP"
FT                   /db_xref="InterPro:IPR001353"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q9LSU1"
FT                   /protein_id="BAA96832.1"
FT                   /translation="MFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKDG
FT                   VVLAVEKRVTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYG
FT                   EPMTVESTTQAICDLALRFGEGDEESMSRPFGVSLLIAGHDENGPSLYYTDPSGTFWQC
FT                   NAKAIGSGSEGADSSLQEQYNKELTLQEAETIALSILKQVMEEKVTPNNVDIAKVSPNY
FT                   HLYTPAEVEAVIARL"
XX
SQ   Sequence 1056 BP; 277 A; 243 C; 267 G; 269 T; 0 other;
     cgtccggagc tctcgatact ttagccgcga ttcggaggga aaccctagct agctcccgct        60
     ctcgatcccg cgcccgccac cgcactcggc aagatgttcc tcacgaggac ggagtacgac       120
     cgcggggtga acaccttctc cccggagggg cggttgttcc aggtcgagta cgccattgag       180
     gccatcaagt tggggtcaac tgcgatcggg ttgaagacca aggatggtgt tgtccttgct       240
     gtagagaaac gtgtgacctc gccactgctg gaaccaagca gtgtggagaa aatcatggaa       300
     attgacgagc acataggctg tgccatgagt ggccttattg ctgatgctag aacattggtt       360
     gagcatgctc gtgttgaaac ccagaatcat aggttctcat atggggagcc aatgacagta       420
     gaatctacta cacaagctat ctgtgactta gctctgcgtt ttggtgaagg tgatgaagag       480
     tcgatgtcac gaccatttgg tgtctctctc cttattgctg gtcatgatga gaatggaccc       540
     agcttgtact acactgaccc atcaggaacc ttttggcagt gcaatgccaa ggcaattgga       600
     tcaggttctg aaggagctga tagctcatta caggagcagt acaataagga gttgaccctt       660
     caggaggctg agaccatagc cctgtctatc ttgaagcagg ttatggaaga aaaggttact       720
     ccaaacaacg tcgatatcgc aaaggtttct cccaactacc acctctacac ccctgcagag       780
     gttgaagctg tcattgcacg gttgtgagaa gattgccatc gcgtgttatt ttaatcagcc       840
     ctaagacagc ctctgtatga acttcctaaa tggattatca gtccattgtt tgctatggct       900
     gtcatgttat gttaacaaga tagtggctgc tagagtttat tactggctct aatagtctgg       960
     tgtgcagccc agtcatttgc ttgttttcag cagtgttgag accatgtact atcaaaaaga      1020
     gaacgacaat cctttccaaa aaaaaaaaaa aaaaaa                                1056
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