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EBI DbfetchID AB025362; SV 1; linear; genomic DNA; STD; PRO; 3298 BP. XX AC AB025362; XX DT 12-JAN-2002 (Rel. 70, Created) DT 09-JUN-2005 (Rel. 84, Last updated, Version 3) XX DE Clostridium josui agaA gene for alpha-galactosidase, complete cds. XX KW alpha-galactosidase. XX OS Clostridium josui OC Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; OC Clostridium. XX RN [1] RP 1-3298 RA Karita S.; RT ; RL Submitted (28-MAR-1999) to the EMBL/GenBank/DDBJ databases. RL Shuichi Karita, Mie University, Department of Sustainable Resource Science; RL 1577 Kurimamachiya, Tsu, Mie, 514-8507, Japan RL (E-mail:karita@bio.mie-u.ac.jp, Tel:81-59-231-9619, Fax:81-59-231-9604) XX RN [2] RX DOI; 10.1128/JB.184.2.600-604.2002 RX PUBMED; 11751843. RA Jindou S., Karita S., Fujino E., Fujino T., Hayashi H., Kimura T., RA Sakka K., Ohmiya K.; RT "alpha-Galactosidase Aga27A, an enzymatic component of the Clostridium RT josui cellulosome"; RL J. Bacteriol. 184(2):600-604(2002). XX FH Key Location/Qualifiers FH FT source 1..3298 FT /organism="Clostridium josui" FT /strain="FERM P-9684" FT /mol_type="genomic DNA" FT /db_xref="taxon:1499" FT CDS 152..1588 FT /codon_start=1 FT /transl_table=11 FT /gene="agaA" FT /product="alpha-galactosidase" FT /db_xref="GOA:Q8VV86" FT /db_xref="HSSP:1UAS" FT /db_xref="InterPro:IPR000111" FT /db_xref="InterPro:IPR002105" FT /db_xref="InterPro:IPR002241" FT /db_xref="InterPro:IPR013785" FT /db_xref="InterPro:IPR016134" FT /db_xref="InterPro:IPR017853" FT /db_xref="InterPro:IPR018242" FT /db_xref="InterPro:IPR018247" FT /db_xref="UniProtKB/TrEMBL:Q8VV86" FT /protein_id="BAB83765.1" FT /translation="MKKIKRLIALAILTMVFISPFPASVLNFNQVMALNNGLGLTPPMG FT WNSWNIFGGDINEDKIKEIADAMVTTGMKDAGYEYVNLDDNWMANPARDANGKLIPDPK FT RFPSGMKALADYIHSKGLKFGIYGDRGVTTCCNIPQSGSQGYEEQDAKTFAEWGLDYLK FT YDNCASDSNLQAGYEKMRDALLKTGRPIFYSICCWYFAGPWMVDCGNSWRTTGDISDSW FT GSIIRNIDENSKSAAYAGPGHWNDPDMLEVGNGNMTDTEYKAHFSMWCMMAAPLIAGND FT LRNMTPATKEILTNKEVIAIDQDAAGVQGTKVSSSGELEVWCKPLGTDGTTKAVALLNR FT GATSADITVNWSDIQLADGPVTVRDLWEHKDCGTFNTGYTANVPSHGVVVLKVQASSTD FT TNIEFGDVDGNGMIDALDYSLVKRYLLGQISDCPDSKGKLAADVDGDQQITALDFSLIK FT QYLLGTINKFPAQTASKIKP" XX SQ Sequence 3298 BP; 1094 A; 519 C; 707 G; 978 T; 0 other; gatatctaaa gtttagttgg ttttaccaag ataaataagt tatggtaaaa tgatatttat 60 tatagataaa gtcccagcat aacaaacata catactcagt taacgttgtt ctagtttgtg 120 tctcactatt aattttttgg aggttattat aatgaaaaaa atcaaacgcc ttatagcctt 180 ggcaatttta acaatggtgt ttatctcacc atttccggca tctgtcttaa atttcaatca 240 agtaatggcc ctgaacaacg gtctgggatt gactccccca atgggttgga acagctggaa 300 tatatttggg ggtgacatca acgaagataa aattaaagaa attgcagatg ctatggttac 360 aacaggaatg aaggatgcag gctatgagta tgtaaatctt gatgacaatt ggatggcaaa 420 ccctgcacgt gacgctaatg gaaaacttat tccagacccc aaacgttttc cgagcggaat 480 gaaggctttg gcagattata ttcattcaaa aggattaaaa tttggaatat atggtgacag 540 gggagtaacc acttgctgca atattcccca aagtggaagt cagggatatg aggagcaaga 600 tgcaaaaact tttgctgaat gggggctgga ctatttaaaa tatgataact gcgcttcaga 660 cagcaatttg caggcaggct acgaaaaaat gagggatgct cttttgaaga cagggaggcc 720 tattttttac agcatatgtt gctggtattt tgcaggtccg tggatggtag attgcggtaa 780 ttcttggaga accacggggg atataagtga cagttgggga agcattataa ggaatattga 840 cgaaaactct aaatcagccg cttacgcagg tcctgggcat tggaacgacc cagatatgtt 900 ggaggttggt aatggtaata tgacagacac agaatacaaa gcgcatttca gcatgtggtg 960 tatgatggca gctccactta ttgccggaaa tgatcttaga aatatgacac ctgctaccaa 1020 agaaattctt accaacaaag aagtcattgc tattgaccaa gatgccgcag gagtgcaagg 1080 cactaaggta agttcttcag gagaacttga agtatggtgt aaacctctag ggacagatgg 1140 tactaccaag gcggttgcac tcttaaatag aggagccact tcggcagata tcacagttaa 1200 ttggagtgat atacagcttg ccgatggtcc tgtcacagtt cgtgatcttt gggagcataa 1260 ggactgcggt acctttaaca ctgggtatac agccaatgta ccgtcacatg gtgtagtggt 1320 actaaaagta caagcaagct ccactgatac aaatatagag tttggtgatg ttgacggaaa 1380 tggcatgatt gacgcattag attattcatt agtaaaacgg tatttgctgg gccagatttc 1440 tgattgtcct gattcaaaag gcaagcttgc tgctgatgtt gatggagacc agcaaataac 1500 agcactggat ttttcattaa ttaagcaata cttacttggg actattaaca aatttcctgc 1560 tcaaacagca agtaaaatca agccataatc tctctacttc tttataataa atgtgggtgg 1620 ttgaaacgag gtgaacgtaa ctaatgtaag agtagcaaaa gcaaagtctt attccggggc 1680 aggaccatga aacaatttgc ggcttactag atatgtatca agggcaaatt ggatgacgat 1740 gggggaagtg aatctgacag tagcagcggt cagaatatgg catacattaa tgacccggac 1800 ggtagactct gtgattgggg gattccacgt acagagtgtt gcggtgtacg tcttcctttt 1860 gattataacg aagaagtacc tccacaaatg cttatgcttg atgttcccga agctgagtaa 1920 ttattgtgtt atataaattt agtgaaaatc gtatactctt aagagaagtg gcattgaggc 1980 ttttctaggg tatacgattt tttgagttta tccaacagta tataaagcag ctcattaaat 2040 ttgataattg tgtaaactta atgttacctt gcacaagtat atgttacttc ttcatcataa 2100 tccaatttta tttatcattt atagacaaaa aataacaaat ttattaattt taatactaaa 2160 atgtaataaa tataaatatt gtaaaattat atatttgagt atataatgtt cttatacaca 2220 cattgtaaaa tattgatata aattgcatag attcataaaa aaagaaacta ttttcagtta 2280 taatattgca gaacttaata gaattgggga cagtatattt ttgagggaaa gcatgtgaat 2340 aatggaaatg actaagatga attgttttat gtattccagt gtatctggaa gaaatttaca 2400 ttggtcgcga tgctgttagt accaatagcg tggatttgct caatctgcga tagatattct 2460 gtaaattaat tagttcgctt tttatcataa taggtataaa aaggcattct ccgttaaaca 2520 catccatacc tttaaaaaag gccttctcaa agcccttgga gcagtaatgc ggcattaatt 2580 ccagggattt ttaaagttct caaaagatac aagaagtgta tatcagattc atccatattt 2640 ataatttaat aaccgagata tatgttatca gtttaagttt agctttaact gattttgatt 2700 tcctattatc gcaatcagaa aggaagaaga atcatgacaa aacaagagat tttttgtatt 2760 atcaaggaaa atattctaga aatacttcca gatttaccag aagaaagcat tactattgag 2820 gaaagtttaa aaaatcttgg agcaaattca atcgaccgta tggatatcat tgtggatact 2880 attgaaaggc ttcaactaaa gattccttta gttgaatttg gcatgctgaa aaacattggg 2940 gaaatcgtag accttttgta tgaaaagaag atggggagtt aaataaatgg gcgatagtaa 3000 aagaatggtt gcgattacgg gcatgggaat tgtaagttcc attgggaaca gtatcccgga 3060 atttacagcc tctctcaaag aaggaaaaca tggtattaaa aagctggaaa atatgccggc 3120 acctgaaatt tccgtgacca ttggtgggca aattaaaaac ttttcctttg aagcaggctt 3180 ggaaaaaata tactcttttg cctgccgaaa cagtgaaaaa cgccaggcag tttgcacggc 3240 ggtcatcact acccattcag gcttcagttc tagctacttt ggaggcatgg gagaattc 3298 // |
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