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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AB023464; SV 1; linear; genomic DNA; STD; PLN; 1899 BP.
XX
AC   AB023464;
XX
DT   04-AUG-1999 (Rel. 60, Created)
DT   14-APR-2005 (Rel. 83, Last updated, Version 2)
XX
DE   Arabis gemmifera ChiB gene for basic endochitinase, complete cds,
DE   isolate:Ashibi 56.
XX
KW   basic endochitinase; ChiB.
XX
OS   Arabidopsis halleri subsp. gemmifera
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Arabidopsis.
XX
RN   [1]
RP   1-1899
RA   Kawabe A.;
RT   ;
RL   Submitted (08-FEB-1999) to the EMBL/GenBank/DDBJ databases.
RL   Akira Kawabe, Graduate School of Agriculture, Kyoto University, Laboratory
RL   of Plant Genetics; Kitashirakawa Oiwake Cho, Sakyo-ku, Kyoto, Kyoto
RL   606-8502, Japan (E-mail:kawabe@kais.kyoto-u.ac.jp,
RL   Tel:81-75-753-6145(ex.6145))
XX
RN   [2]
RA   Kawabe A., Miyashita N.T.;
RT   "DNA variation in the basic chitinase locus (ChiB) region of the wild plant
RT   Arabidopsis thaliana";
RL   Unpublished.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1899
FT                   /organism="Arabidopsis halleri subsp. gemmifera"
FT                   /isolate="Ashibi 56"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:63677"
FT   CDS             join(318..777,978..1525)
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="ChiB"
FT                   /product="basic endochitinase"
FT                   /db_xref="GOA:Q9SXJ1"
FT                   /db_xref="HSSP:2BAA"
FT                   /db_xref="InterPro:IPR000726"
FT                   /db_xref="InterPro:IPR001002"
FT                   /db_xref="InterPro:IPR016283"
FT                   /db_xref="InterPro:IPR018371"
FT                   /db_xref="UniProtKB/TrEMBL:Q9SXJ1"
FT                   /protein_id="BAA82826.1"
FT                   /translation="MPSKKEYHKTLNKMKTNLFLFLIFSLLLSFSSAEQCGRQAGGALC
FT                   PNGLCCSEFGWCGNTEPYCKQPGSQSQCTPGGTPPGPTGDLSGIISSSQFDDMLKHRSD
FT                   AACPARGFYTYDAFITAAKSFPGFGTTGDTATRKKEVAAFFGQTSHETTGGWASAPDGP
FT                   FSWGYCFRQEQNPGSDYCEPSATWPCASGKRYYGRGPMQLTWNYNYGLCGRAIGVDLLN
FT                   NPDLVANDAVIAFKAAIWFWMTAQPPKPSCHAVIAGQWQPSAADLAAGRLPGYGVITNI
FT                   INGGLECGRGQDGRVADRIGFYQRYCNIFGVNPGGNLDCYNQRSFGNGLLNAAI"
XX
SQ   Sequence 1899 BP; 560 A; 424 C; 378 G; 537 T; 0 other;
     tttgttatgc ttttggtctt ctgaaattac caacatttag cacagtttca tacataaaaa        60
     gttatcatta cttgtagtta taaacataga tatttcccaa aaagcaaaaa caaatcagac       120
     atgcaacatc taacctagcg aaattgacgg aaaaggaaaa taaatataga aacaaaccta       180
     ccaaatactg tttcttgccc atagccacac tccacagaca taagaaatta aactataaac       240
     tatcgaaaaa gatagaattt gatatgattt aacattcatt aattgaatat tggatactac       300
     tatatatatc cttgttcatg ccttcaaaaa aagaatacca taaaacattg aacaaaatga       360
     agactaatct ttttctcttt ctcatcttct cacttctctt atcattttcc tctgccgagc       420
     aatgtggtcg ccaagccgga ggagcactct gccccaacgg tctatgctgc agcgagttcg       480
     gatggtgcgg taacaccgaa ccctactgta agcagcctgg cagccaaagc cagtgcactc       540
     ccggtggtac tcctcctgga cccaccggcg acctttcggg catcatttca agttctcagt       600
     tcgatgatat gcttaagcat aggagtgatg ctgcttgtcc tgctagaggt ttctacactt       660
     acgacgcctt tatcaccgct gcaaagtcct tccctggttt tggcaccacc ggagacaccg       720
     ccacgaggaa gaaggaggtt gccgccttct tcggccagac ttcccatgaa accacaggta       780
     ctcattaaca attaattaag ctttgataat ttcaaaggta gtttctaatt tttacgttta       840
     taataataat atttctaatt tttgttttgg gtcaaaatcc tcagcttaaa ctataaacat       900
     cacttattgt tagatgttta taaataatat aaaagttgtg accatatatt aatgaaccga       960
     atggttacat cgtgcaggtg ggtgggcttc agcaccagac ggaccatttt catggggcta      1020
     ctgtttcagg caagaacaga atcctggttc agactactgt gaaccaagcg ccacgtggcc      1080
     atgcgcatct ggcaaacgct actatggaag aggaccgatg cagctgacgt ggaactacaa      1140
     ttacggtcta tgcggtagag ctataggagt tgacttactc aacaaccccg acctcgtggc      1200
     caacgacgca gtgatcgctt tcaaagccgc gatttggttc tggatgactg ctcagcctcc      1260
     caaaccgtcc tgccacgcgg tgatcgccgg ccagtggcag ccgtcagccg ctgaccttgc      1320
     cgccgggaga ttaccaggtt acggagtgat tacgaacatc attaacggtg gattggaatg      1380
     cggacgtggc caagacggga gagtcgcgga tcgtataggg ttttatcaga ggtattgtaa      1440
     catatttggg gttaatcctg gtggtaatct tgattgttac aaccaaagat cctttggtaa      1500
     cggcctcctc aacgctgcta tctaataacg agtattagta ttatgcagct ttgtattatc      1560
     aaaacaataa tatcagacta ataaagcttc actgtttatg tttcgatttt atttcctgtg      1620
     ggcctttaat tgagcgttag tggatgagac aatcacatag acaaagaaag gtgcatagat      1680
     atttatactt cgacacaggt aaaggtattt gacaatttct gtgcgactct gccgacacgt      1740
     ttcgtcgtat aacgtgccgc tatctacagc atcattttcg agattggtat gagtttctct      1800
     tttaaacttg ggtgacctaa ccgattgagg ccgaatcaaa ccaatctaaa actcgaatcg      1860
     atactctttt tcttaccaac aaaaccaaca tcaaaccaa                             1899
//
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