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EBI DbfetchID AB022788; SV 1; linear; genomic DNA; STD; PRO; 5448 BP. XX AC AB022788; XX DT 01-FEB-1999 (Rel. 58, Created) DT 14-APR-2005 (Rel. 83, Last updated, Version 4) XX DE Aeromonas punctata xysB, xyg genes for xylosidase B, alpha-glucuronidase, DE complete cds. XX KW . XX OS Aeromonas punctata OC Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; OC Aeromonadaceae; Aeromonas. XX RN [1] RP 1-5448 RA Kitagawa E., Suzuki T., Kawai K.; RT ; RL Submitted (25-JAN-1999) to the EMBL/GenBank/DDBJ databases. RL Tohru Suzuki, Gifu University, Department of Biotechnology; 1-1 Yanagido, RL Gifu, Gifu, 501-1193, Japan (E-mail:suzuki@cc.gifu-u.ac.jp, RL Tel:81-58-293-2909, Fax:81-58-293-2909) XX RN [2] RX DOI; 10.1271/bbb.65.487 RX PUBMED; 11330658. RA Suzuki T., Kitagawa E., Sakakibara F., Ibata K., Usui K., Kawai K.; RT "Cloning, expression, and characterization of a family 52 beta-xylosidase RT gene (xysB) of a multiple-xylanase-producing bacterium, Aeromonas caviae RT ME-1"; RL Biosci. Biotechnol. Biochem. 65(3):487-494(2001). XX FH Key Location/Qualifiers FH FT source 1..5448 FT /organism="Aeromonas punctata" FT /strain="ME-1" FT /mol_type="genomic DNA" FT /note="synonym: Aeromonas caviae" FT /db_xref="taxon:648" FT CDS 575..2764 FT /codon_start=1 FT /transl_table=11 FT /gene="xysB" FT /product="xylosidase B" FT /note="XysB" FT /db_xref="GOA:Q9Z487" FT /db_xref="InterPro:IPR000852" FT /db_xref="UniProtKB/TrEMBL:Q9Z487" FT /protein_id="BAA74507.1" FT /translation="MSTFKSIFYNAHHAPIGAFASFTLGYKGAKGGLGLELGKPADQNV FT YIGLQSRDGENYQALPFYEASQDESSRYDVEKLDNGDTASITASQVPQPLITAFRDEDI FT TREFTSGTDTWTAGDLTFRIYSPVRPVPDPTNGDREELMDALVPAVLVEMTIDNTEGQQ FT PRKAYFGYQGNDPYSAMRLIGGPEGGSITGVGQGRLTAIMSADDGLWPARGFTLEKLLQ FT EKHRENLAFGLGSTAALLMEVPAGEKRTYQFAVCFYRGGIVTTGMDTTYWYTRYFSDIQ FT AAGEYALQRFSELTASCGEIEQRLGTAALTEDQSFMLAHSIHSYYASTQLLDADGEPLW FT VVNEGEYRMMNTLDLTADQLYFELALNPWTVRNELEWFVKRYSYTDEVRFPGEEKLYPG FT GITFTHDIGVANVFSRPGHSAYELVGIDDCFSQMSHEELVNWLCCATVYIEQTQDQAFV FT KNMLPIIQDCFESMLNRDHPDAEHRNGLMGLDSSRTQGGAEITTYDSLDVSLGQSRNNI FT YLAGKCWAIYVALEKLFATEKLANLSHQAGLQADRCAASIAAQLTDGGYIPAVIAENND FT SRIIPAIEGLVFPYFTGCEAALDVKGRFGPYLKALQTHLKTVLVPGTCLFEDGGWKLSS FT TSNNSWLSKIYLSQFIARELLDVEWDETGKAADAAHVNWLLHPEESYWCWSDQILSGVA FT VGSKYYPRGVTSILWLLEGKGNRLTQIYASKEAVQ" FT CDS 2761..4857 FT /codon_start=1 FT /transl_table=11 FT /gene="xyg" FT /product="alpha-glucuronidase" FT /db_xref="GOA:Q9Z486" FT /db_xref="HSSP:1K9D" FT /db_xref="InterPro:IPR013781" FT /db_xref="UniProtKB/TrEMBL:Q9Z486" FT /protein_id="BAA74508.1" FT /translation="MNQSVVQNALSGPQYDAWLGYHFELPRANGLAQKTAPAWSKLILA FT EENHGVITTALTELSRGLEKLYGVKPSVSHLSDTQQSERDNNASAPAIRIGTWTGSNSV FT AGSFSEKERSTVQGEGYIIRETEGVLVIGSETPQGVLYGAFHLLRELTMDQGSATKADD FT AVSKWSFITEQPTNALRMINQWDNVDGSIERGYAGDSIFYDNGEFTLDLERIRDYARLL FT ASTGINAISINNVNVHRRESLFLTERYLGDVAKVAAEFRAYGIRLFLSANYASPIEIGG FT LQTADPLDAKVREWWNIQTAKVYAAIPDFGGYLIKADSENRPGPFTYNRDHADGANMLA FT EALRPFGGLVIWRCFVYNCKQDWRDRSTDRARAAYDHFTPLDGRFADNVILQIKNGPMD FT FQVREAVSPLFGAMENTNQVIEFQITQEYTGQQRHLCYLVPQWKEVLDFDTYAKGKGSE FT IKRIADGSLYKRPHSGFAAVSNIGADACWTGHPLAQANLYGYGRLAWNPELSAEEIADE FT WVRLTFGHEDEVVRKVTGMLLTSLDIYENYTAPLGVGWMVNPEHHYGPNVDGYEYSKWG FT TYHFADCHGIGVDRTVNSGTGYTSQYHPENADRYESVDTCPDELILFFHHVPYTHVLHS FT GKTVIQHIYDTHFEGVAQAEALAETWRQLEGKIDPVIFIDRTVTAVQDTLHSITLRMLI FT AMNP" XX SQ Sequence 5448 BP; 1431 A; 1171 C; 1479 G; 1367 T; 0 other; gtttgatacg tgccagtaac gataggaaca actgatcatc aatgtcaaaa tgcatacaaa 60 aataggtaaa acccttgccg ttatggctct ggctggaatg aatacttccg ggaggaatca 120 ggagcagttc gccagccttt tgaatatata gggtgccgtt caccatcatg cgttgctcgc 180 cttccgtgac ataattcaat tcatattgag ggtgctcatg cgccggataa tcccagtccg 240 tacctacact tcgtaaatga atggcgaaca gattaaccgt tgtttgcaca tctggaaaaa 300 aaatttcatg gacactttct cccaaagtag gaggcaaata cgttgaagac atggaagatc 360 ccccttttat atagaggttg ttcaaaaaat gcgatttcga actcgaattt atatcgaatg 420 gaatggtttt gtgtaaccgc tttaatccat tatagtctat cagcttgatt tgggtaaata 480 tccgattgat ttgatcatgg tctgaggtgg aaccgcgtgt taggatgggg ctaatgaaaa 540 cgtatgcaaa ctattctgag aggggttata attcgtgagc acattcaaat ccatctttta 600 taatgcacat cacgctccga ttggtgcttt tgcgagtttt acactgggat ataaaggagc 660 caaaggcggg ttgggtcttg aactcggcaa gccggcggac caaaatgtat atattggatt 720 acaatctcgc gatggagaga attatcaggc gcttcctttt tatgaagctt cccaggatga 780 gagcagccgc tatgatgtag agaagttgga taacggggac acagcgtcga taacggcgtc 840 ccaagttcca caacctctta ttacggcttt tcgcgatgaa gatattaccc gtgaattcac 900 ctcaggtacg gatacatgga ctgctggaga tctgacgttc cgtatctact cgcctgttcg 960 tccagtacct gatccaacga atggggatcg tgaagaatta atggatgcac tcgtacctgc 1020 cgtattggtt gagatgacaa tagacaatac ggaaggtcaa caaccccgca aagcctactt 1080 tggctatcag ggcaatgatc cgtactctgc gatgcgtctg attggggggc ctgaaggtgg 1140 ctccatcaca ggtgtgggac aaggtcgact cacagcgatt atgtcggcag atgacggact 1200 gtggcccgca cgcggattta cgctggagaa actcttgcaa gagaaacatc gggagaatct 1260 ggcatttgga cttggctcaa ccgctgcact actgatggaa gtgccggctg gagagaaacg 1320 tacgtatcaa tttgcagtat gtttctatcg cgggggcatt gtgacgaccg gaatggacac 1380 aacgtattgg tatacgcgct atttctccga tattcaggca gcaggagagt atgcactaca 1440 acgcttcagt gaattgaccg cttcctgtgg agagattgaa cagcgccttg gaacggctgc 1500 tttgaccgaa gatcaatcat tcatgctggc tcattccatt cacagctatt atgccagtac 1560 tcaactgctg gatgccgatg gcgagccact ctgggtggtg aacgaagggg agtatcggat 1620 gatgaacaca cttgatctga cagctgatca gttgtacttc gagcttgcct tgaatccatg 1680 gacggtgcgt aatgagctgg agtggtttgt aaaacgatac agttatacgg atgaggttcg 1740 ttttccaggg gaagaaaagt tatatccggg cggcattacc tttacccatg atattggtgt 1800 agcgaatgtg ttctcacgcc ctggacactc ggcatatgaa ctggttggca ttgacgactg 1860 tttctcacag atgagccacg aggaactggt gaactggctc tgctgcgcga cagtatacat 1920 tgaacagaca caggatcaag cttttgtgaa aaacatgttg cctattatcc aggattgctt 1980 cgaaagtatg cttaatcgtg accatcccga tgctgagcat cgtaacggtc taatgggtct 2040 ggatagcagc cgtacccaag gtggagcgga aattacaacc tatgacagcc tggatgtgtc 2100 acttggtcag tctcgcaata atatctatct ggcgggtaaa tgttgggcga tctatgttgc 2160 attggaaaag ctgtttgcaa cggagaagtt ggccaatctg tcccatcaag cagggcttca 2220 agcggatcgc tgcgctgcca gcattgctgc acagttgact gatggcggtt acattccagc 2280 tgttattgca gaaaataatg attctcgaat tattccggcg attgaaggtc tggtgttccc 2340 gtactttact ggctgtgaag cagcactgga tgtgaagggt cgttttggac cttatctgaa 2400 agctcttcaa actcatctga agacggttct tgtaccggga acatgcctgt tcgaagatgg 2460 aggctggaaa ctgtcctcaa caagcaataa ctcgtggtta agcaaaatct atttgtccca 2520 gtttatcgct agagagctgc tagatgtgga atgggatgag acaggcaagg cagcagacgc 2580 ggcgcatgtc aactggctgc tgcatccgga ggaatcctac tggtgctgga gcgatcagat 2640 cctgtcaggt gtggcggttg gcagcaagta ctatccgcgt ggtgtaacgt cgattctatg 2700 gctactcgaa ggaaaaggga atcgtcttac gcagatctat gctagcaagg aggcggtaca 2760 atgaaccaat ccgtcgttca aaatgccttg tcaggtccac agtatgatgc gtggctgggg 2820 taccacttcg aattgccaag agcgaatgga cttgcccaaa agacggctcc tgcgtggagc 2880 aagctgatac tcgcggaaga gaaccatgga gtaatcacaa cagctctaac cgaactttca 2940 cgaggactgg agaagttgta tggcgtgaaa ccgtcggtca gtcatctgtc tgatactcag 3000 caaagtgagc gggacaataa cgcttccgct cccgcgatac gaatcggtac ttggacaggg 3060 agcaattcgg tggctggttc gttcagtgag aaagagcgtt caactgttca aggagaaggg 3120 tacatcattc gtgagaccga gggtgtactg gtcattggat cagagacccc ccaaggtgtg 3180 ctgtatggtg cattccatct gcttcgggaa ctgacaatgg atcaaggaag tgcaactaag 3240 gcggatgacg ctgtgagcaa gtggagcttc attacagagc agcctaccaa tgcactgcga 3300 atgattaatc agtgggataa cgtggacgga agcattgaac ggggttacgc tggagactcg 3360 attttctacg ataacgggga attcacactg gacttggaac gcatcagaga ttatgcacgc 3420 ttgcttgctt cgacgggtat caatgccata tcgatcaaca acgtcaatgt acaccggcgt 3480 gagagtctgt ttctgacaga acgttatctt ggtgatgtag cgaaggtggc cgctgaattc 3540 agagcgtatg gcattcgatt gttcctgagc gccaactacg caagtccaat cgagattggt 3600 ggattgcaga cggcagatcc gctggatgcg aaggtacggg aatggtggaa cattcaaacg 3660 gcgaaggtgt atgcagccat tccggatttt gggggttacc tgatcaaggc agattccgag 3720 aatcgaccgg gtccgttcac gtataatcgg gatcatgccg atggtgcaaa catgctggct 3780 gaagctcttc ggccattcgg tggattggtg atctggcgtt gcttcgtcta taactgcaag 3840 caagattggc gggatcgttc cacagaccgt gcacgggcag cctatgacca ctttacgccg 3900 ctggatgggc gttttgccga caatgtcatt ttgcagatca agaacgggcc gatggacttt 3960 caggtgaggg aagcggtatc cccgctgttc ggcgccatgg aaaatacaaa tcaggtgatt 4020 gaatttcaga ttacgcagga gtataccggg caacaacgtc atctctgtta tcttgttccc 4080 cagtggaaag aagtattgga ctttgacaca tacgccaagg gtaaaggttc agagatcaag 4140 cgaatcgcgg acggttctct gtataaaaga cctcacagtg gcttcgccgc agtatccaat 4200 atcggtgcag atgcctgttg gacaggacat cccctcgcgc aggcgaatct gtatggatac 4260 ggaagacttg cgtggaatcc ggagctgtct gccgaagaga ttgccgatga gtgggtgaga 4320 ctcacatttg gccatgaaga cgaagttgtg cggaaggtta cgggcatgct tttgacttca 4380 ttagatatct atgagaatta cacggcgcct ctcggtgtgg gttggatggt gaatccggaa 4440 catcattacg ggccgaatgt agatggatat gagtattcca aatggggcac gtatcacttt 4500 gccgattgtc atggcattgg tgtagatcga accgtgaaca gcggtacagg atacacttca 4560 cagtatcacc ctgagaatgc tgatcgctat gaatccgtag atacctgtcc agatgagctg 4620 atcttatttt tccatcatgt gccgtacacc catgttctgc attccggtaa aacggtcatt 4680 cagcatattt atgatacaca ctttgaaggt gttgcgcagg cggaggcgtt agccgagaca 4740 tggagacagc tggagggcaa aatcgaccca gtcattttca tagatcgaac cgtaacagcg 4800 gtacaggata cacttcacag tatcaccctg agaatgctga tcgctatgaa tccgtagata 4860 cctgtccaga tgagctgatc ttatttttcc atcatgtgcc gtacacccat gttctgcatt 4920 ccggtaaaac ggtcattcag catatttatg atacacactt tgaaggtgtt gcgcaggcgg 4980 aggcgttagc cgagacatgg agacagctgg agggcaaaat cgacccagtc attttcagca 5040 aagttgcttc attacaggac aaccaggccg aacatgcgaa ggaatggcgg gacatgatca 5100 atacgtactt ctatcgaaag agcggcattg cggatgaaca aggtagaacg atctattgat 5160 tggtgatgtg aagagagaag ataccttgtt ttctttgatg taaactagac agcatggata 5220 tacatgagga ggagaaccgt atgggacaat atcaactacc cgagaccatg aaggccgctg 5280 tcatgacaga gccaggacac attattattg aggaacaacc tgtcccgcaa ccggcagcgg 5340 atgaggtgtt aatccaagtg atggctgttg gggtgtgtgg ctcggatgtg cattattttg 5400 aacatggacg cattggcaga tttgtcgtgg aaaaaccgat ccgaattc 5448 // |
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