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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AB022681; SV 1; linear; genomic DNA; STD; PRO; 1544 BP.
XX
AC   AB022681;
XX
DT   28-JAN-1999 (Rel. 58, Created)
DT   14-APR-2005 (Rel. 83, Last updated, Version 3)
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DE   Erwinia carotovora gene for Peh, complete cds.
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KW   Peh.
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OS   Pectobacterium carotovorum
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
OC   Enterobacteriaceae; Pectobacterium.
XX
RN   [1]
RP   1-1544
RA   Tsuyumu S., Jhoncon J., Sakai F.;
RT   ;
RL   Submitted (20-JAN-1999) to the EMBL/GenBank/DDBJ databases.
RL   Shinji Tsuyumu, Shizuoka Univ., Faculty of Agriculture; 836 Ohya, Shizuoka,
RL   Shizuoka 422-8529, Japan (E-mail:tsuyumu@agr.shizuoka.ac.jp,
RL   Tel:81-54-238-4823, Fax:81-54-238-4823)
XX
RN   [2]
RA   Jhoncon J., Sakai F., Tsuyumu S.;
RT   "Determination of Nucleotide Sequence of a Region Producing Multiple
RT   Polygalacturonases from Erwinia carotovora subsp. carotovora EC1";
RL   Nippon Shokubutsu Byori Gakkaiho 60:208-215(1994).
XX
RN   [3]
RA   Jhoncon J., Miura M., Tsuyumu S.;
RT   "Cloning of a Region Encoding Multiple Polygalacturonases of Erwinia
RT   caratovora subsp. carotovora EC1";
RL   Nippon Shokubutsu Byori Gakkaiho 60:202-207(1994).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1544
FT                   /organism="Pectobacterium carotovorum"
FT                   /sub_species="carotovora"
FT                   /strain="EC1"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:554"
FT   -35_signal      74..79
FT   -10_signal      98..103
FT   RBS             296..299
FT   CDS             306..1514
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="peh"
FT                   /product="Peh"
FT                   /db_xref="GOA:Q9S5V7"
FT                   /db_xref="HSSP:1BHE"
FT                   /db_xref="InterPro:IPR000743"
FT                   /db_xref="InterPro:IPR006626"
FT                   /db_xref="InterPro:IPR011050"
FT                   /db_xref="InterPro:IPR012334"
FT                   /db_xref="UniProtKB/TrEMBL:Q9S5V7"
FT                   /protein_id="BAA74431.1"
FT                   /translation="MEYQSGKRVLSLSLGLIGLFSASAFASDSRTVSEPKAPSSCTVLK
FT                   ADSSTATSTIQKALNNCGQGKAVKLSAGSSSVFLSGPLSLPSGVSLLIDKGVTLRAVNN
FT                   AKSFENAPSSCGVVDTNGKGCDAFITATSTTNSGIYGPGTIDGQGGVKLQDKKVSWWDL
FT                   AADAKVKKLKQNTPRLIQINKSKNFTLYNVSLINSPNFHVVFSDGDGFTAWKTTIKTPS
FT                   TARNTDGIDPMSSKNITIAHSNISTGDDNVAIKAYKGRSETRNISILHNEFGTGHGMSI
FT                   GSETMGVYNVTVDDLVMTGTTNGLRIKSDKSAAGVVNGVRYSNVVMKNVAKPIVIDTVY
FT                   EKKEGSNVPDWSDITFKDITSQTKGVVVLNGENAKKPIEVTMKNVKLTSDSTWQIKNVN
FT                   VKK"
FT   sig_peptide     306..383
FT   terminator      1517..1542
XX
SQ   Sequence 1544 BP; 451 A; 300 C; 390 G; 403 T; 0 other;
     ctgtgaagag aggaaaagct taccacccgc tggcttctgc gcatgacggg attcgttttg        60
     tttccacgtt tcgttgatac ttcatttaat tttttggtga tattttaacc atgcgtaaag       120
     ttgaatgctt tccgaataag cattggaata attttatgta aatggacttt tcattaatct       180
     acataggcat gtgtgacaat ttttagtttc tataaaggcg ttttattttt cttattaagc       240
     aaaatgaaag cgtaatgcct tttggggatg gaaaagttgt ggatgcttat aaggtaaggt       300
     ttgacatgga atatcaatca ggcaagcgag ttttatcatt atcactgggg cttatcggtt       360
     tgtttagtgc atcggcattt gcttctgatt cccgaacggt gagtgaaccg aaagcaccgt       420
     cttcctgtac ggtgcttaaa gcggacagta gtacggccac gagtacaatt caaaaagcgc       480
     tgaataattg cgggcaagga aaagcggtaa agctgagcgc agggagttca tccgtttttc       540
     tgagcggtcc gctttctcta ccttctggcg tgagcttatt aatcgacaaa ggggtaaccc       600
     tacgtgctgt gaataatgcc aagtcttttg aaaatgcgcc ctcatcctgt ggcgtggtgg       660
     atacaaacgg taaaggctgc gatgcattta ttaccgccac aagcacgacg aatagcggaa       720
     tctatgggcc gggcaccatt gatggacagg ggggcgtgaa gcttcaggat aaaaaggtga       780
     gctggtggga tctggctgcc gatgccaaag tgaaaaagtt aaaacagaat accccccggc       840
     tgattcagat taataagagc aagaatttca cgctgtataa cgtctctctc attaattctc       900
     cgaacttcca tgtggtgttc agcgatggtg acggtttcac cgcgtggaaa accacgatca       960
     aaacgccatc taccgccaga aacaccgacg gtatcgatcc gatgtcatca aagaacatca      1020
     ccattgccca cagtaatatt tcgacgggcg acgataatgt ggcgatcaaa gcctataagg      1080
     ggcgttctga gacacgcaat atttccattt tgcataatga atttggaacg ggacatggca      1140
     tgtcgatcgg tagcgaaacg atgggagttt ataacgtgac ggtcgatgat ctggttatga      1200
     ctggcaccac gaatggctta cgtattaaaa gcgacaaatc ggcagccggc gttgtcaatg      1260
     gtgttcggta tagcaacgta gtcatgaaga acgtggcgaa accgatcgtg attgacacgg      1320
     tatatgagaa aaaagaggga agtaatgttc ctgactggag cgacattacg tttaaggata      1380
     ttacgtctca aaccaaaggt gtggtagtgc tgaacggcga gaatgcgaaa aagccgatag      1440
     aagtgacgat gaagaacgtc aaactgacga gcgacagcac atggcaaatc aagaacgtca      1500
     acgttaagaa ataacgcagt tacaaaatcg ttctattaac tgat                       1544
//
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