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EBI DbfetchID AB020341; SV 1; linear; genomic DNA; STD; PRO; 3274 BP. XX AC AB020341; XX DT 26-NOV-1998 (Rel. 57, Created) DT 14-APR-2005 (Rel. 83, Last updated, Version 2) XX DE Desulfovibrio vulgaris genes for Catalase and hypothetical transmembrane DE protein, partial and complete cds. XX KW Catalase; hypothetical transmembrane protein. XX OS Desulfovibrio vulgaris OC Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; OC Desulfovibrionaceae; Desulfovibrio. XX RN [1] RP 1-3274 RA Kitamura M.; RT ; RL Submitted (20-NOV-1998) to the EMBL/GenBank/DDBJ databases. RL Masaya Kitamura, Osaka City University, Faculty of Engineering, Department RL of Bioapplied Chemistry; 3-3-138 Sugimoto, Sumiyoshi-ku, Osaka, Osaka RL 558-8585, Japan (E-mail:kitamura@bioa.eng.osaka-cu.ac.jp, RL Tel:81-6-605-3091(ex.3091), Fax:81-6-605-2769) XX RN [2] RA Kitamura M., Kojima S., Akutsu H., Kumagai I., Nakaya T.; RT "Catalase from Strictly Anaerobic bacteria, Desulfovibrio vulgaris RT (Miyazaki F)"; RL Unpublished. XX FH Key Location/Qualifiers FH FT source 1..3274 FT /organism="Desulfovibrio vulgaris" FT /mol_type="genomic DNA" FT /db_xref="taxon:881" FT CDS <1..417 FT /codon_start=1 FT /transl_table=11 FT /gene="ORF-1" FT /product="hypothetical transmembrane protein" FT /note="similar to E. coli 35.8 kD protein" FT /db_xref="GOA:Q9ZNA0" FT /db_xref="InterPro:IPR005496" FT /db_xref="UniProtKB/TrEMBL:Q9ZNA0" FT /protein_id="BAA34669.1" FT /translation="EFSDLVFALDSIPAIFAVSTDPFIVYTSNVFAILGLRALYFALAG FT VIHRFRYLKYGLSLVLVFIGAKMIVNAAFDAKIISTGAALLVTFGIIAGSMLISMAKTR FT GAGADAQAAPPLGWVPGTPSKSERTTDNTGKPPR" FT repeat_region 1200..1287 FT -35_signal 1301..1306 FT -10_signal 1325..1331 FT RBS 1435..1440 FT CDS 1446..2885 FT /codon_start=1 FT /transl_table=11 FT /gene="Kat" FT /product="Catalase" FT /EC_number="1.11.1.6" FT /db_xref="GOA:Q9ZN99" FT /db_xref="HSSP:1M85" FT /db_xref="InterPro:IPR018028" FT /db_xref="UniProtKB/Swiss-Prot:Q9ZN99" FT /protein_id="BAA34670.1" FT /translation="MTKHKLTTNAGAPVPDNQNAMTAGPRGPMLLQDVWFLEKLAHFDR FT EVIPERRMHAKGSGAYGTFTVTHDITSYTKAALFSKIGKKTDLFVRFSTVAGERGAATA FT ERDIRGFAIKFYTEQGNWDLVGNNTPVFFLRDPLKFPDLNHAVKRDPRTNMRSAKNNWD FT FWTSLPEALHQVTVVMSDRGIPASYRHMHGFGSHTFSFISPDNQRYWVKFHLRTQQGIK FT NLTDAEAEAIVARDRESHQRDLYDSIERGDFPRWTMYVQVMPEKDAEKLPYHPFDLTKV FT WFHKDCPLIEVGVLELNRNPENYFAEVEQAAFNPANVVPGISFSPDKMLQGRLFSYGDA FT HRYRLGVNHHLIPVNAARCPVHSYHRDGAMRVDGNHGSTLAYEPNSYGEWQEQPDFAEP FT PLAIRGDAAHWNFREDADYYDQPGRLFRLMTPQQQDELFQNTARAMGDAPEEIKRRHVG FT NCAKADPAYGAGVARALGLKM" XX SQ Sequence 3274 BP; 631 A; 1232 C; 938 G; 473 T; 0 other; gaattctccg acctggtctt cgcgctggat tccatccccg ccatcttcgc cgtgtccacc 60 gacccattca tcgtctacac ctccaacgtg ttcgccatcc tgggcctgcg ggcgctgtac 120 ttcgccctgg cgggggtcat ccaccgcttc cgctacctca agtacggcct gtcgctggtg 180 ctggtgttca tcggtgccaa gatgatcgtc aacgccgcct tcgacgccaa gatcatttcc 240 actggcgcgg ccctgctggt gaccttcggc ataatcgccg ggtccatgct gatttccatg 300 gcaaagacac gcggcgcggg cgcggatgca caggccgctc cgcccctggg ctgggtgccg 360 ggcaccccga gcaaaagtga acggaccacc gacaacaccg gcaagccccc gcgttgacac 420 cccccttgcc ccggaatatt ctttatcagg aaacaactgt tcccccgtct gccccgcagt 480 tgcaccccaa ggggggccgc actggcgggg cagccgcgac tggacacgac tgtacgcggc 540 tgggcacgac tgcacgaact gatcggaact ggtccgacgg gccacgacga cgcatcctcg 600 acaaccgccc cggctccgga atgcaccggc accccatgga tacccgcacc cgcctcgcct 660 ccctgctgga acgcctgcgc gacaacggac accggctcac cccccagcgg gtggccatcg 720 tccgcgccct gatcgagcac gacggccacc ccacggtgga acaactgcac cagtccatcc 780 tgccggactt tcccaccacc agcctggcca cggtgtacaa gaccatcgcc ctgctgaagg 840 aagacggcga ggtgctggaa ctgggctttg gcgaactggg cagccgctac gacggcaggc 900 atccggaacc gcacccccac cttatctgca cccgctgcgg ggccatcgcc gactattcgc 960 tgcaggagct ggacgaactg gtggcgcgca tggccgccgc aactggcttt gcgtggccag 1020 ccaccggttc gacatgttcg ggctgtgccg acctgccggg ttgctgccca cccagccaac 1080 gcggaccccc agcccgacac gccagccgac acgccccccc cttccggtgc tgagcgcccg 1140 cacgccgacg cacacaacac cccgccacaa caagacatcc cgcacgacga cagtccagac 1200 ccggacctga tccgggcctg acacgggcct gacacgggcc tgatccgcgc tcgacccaag 1260 cccgacccaa gccccgcccg ccgggccttt tcatttttcg ttgacagctg ctcctgctta 1320 tggataataa ttattacaaa gttattttta tcctaaacta tagcgccgtc ccaccgcact 1380 ggcacccgac tggaacccga tcccccccga ccgacaccca cagtcacccc caacaggagg 1440 aacccatgac gaagcacaag ctcaccacca acgcaggcgc cccggtaccc gacaaccaga 1500 acgccatgac cgccgggccg cgcggcccca tgctgctgca agacgtgtgg tttctggaaa 1560 agctggccca cttcgaccgc gaggtgatcc ccgagcggcg catgcatgcc aaggggtccg 1620 gcgcgtacgg caccttcacc gtcacccacg acatcaccag ctacaccaag gccgccctgt 1680 tctcaaaaat cggcaagaag accgatctgt tcgtgcgctt ttccaccgtg gcgggcgagc 1740 gcggcgccgc gaccgcggaa cgcgacatcc ggggcttcgc catcaagttc tacacggaac 1800 agggcaactg ggacctggtg ggcaacaata ccccggtctt cttcctgcgc gacccgctga 1860 agttccccga cctgaaccac gccgtgaagc gcgacccgcg caccaacatg cgcagcgcga 1920 agaacaactg ggacttctgg acatccctgc ccgaggcgct gcatcaggtc accgtggtca 1980 tgagcgaccg gggcattccc gccagctacc ggcacatgca cggcttcggc agccacacct 2040 tcagcttcat cagcccggac aaccagcgct actgggtgaa gttccacctg cgcacccagc 2100 agggcatcaa gaacctgacc gacgccgagg ccgaggccat cgtggccagg gaccgcgaaa 2160 gccaccagcg cgacctgtac gacagcatcg aacgcggtga cttccccagg tggaccatgt 2220 acgtgcaggt catgcctgaa aaggacgcgg aaaagctgcc ctaccacccc ttcgacctga 2280 ccaaggtgtg gttccacaag gactgcccgc tcatcgaggt gggcgtgctg gaactgaacc 2340 gcaacccgga aaactacttc gccgaagtgg aacaggccgc gttcaacccc gccaacgtgg 2400 ttccgggcat cagcttttcg cccgacaaga tgctgcaggg ccgcctgttc tcctacggcg 2460 acgcgcaccg ctaccgcctg ggcgtgaacc accacctgat cccggtcaac gccgcgcgct 2520 gcccggtgca cagctaccac cgcgacgggg ccatgcgcgt tgacggcaac cacggcagca 2580 ccctggccta cgagcccaac agctatggcg aatggcagga gcagcccgac ttcgcggagc 2640 cgcccctggc catcaggggc gatgccgcgc actggaactt ccgcgaggac gccgactact 2700 acgaccagcc cgggcgcctg ttccgcctga tgaccccgca acagcaggac gagctgttcc 2760 agaacaccgc gcgggccatg ggcgatgcgc cggaagagat caagcgccgc cacgtgggca 2820 actgcgccaa ggccgacccg gcctatggcg cgggcgtggc cagggccctg ggcctgaaga 2880 tgtagcgcca ccagcggcgg gcatccccag cggaaccgcc cgccgccccc tcaccgcccc 2940 actcttccgc tccggcattc cggcaacgcg ggctgcatcc cgcatctggc ggaatgcccg 3000 gcggaacccc ccgtgatgca tccgttcctt gatgcatcct cctgtctgcg ggccacccct 3060 gcacggccac gcggaaaggc ccccggcgtc acgcgtggac gtgccggggg ccttgtgcgt 3120 catgccatgg aatccgggga ccagggaacg ggaagcgagg aatggagacc ggaacacctt 3180 ctcaggacaa ggcgccatcc ggggggatat ccccgccgcc tgaacgcccg gaaggccccg 3240 gccccgtgga cagtccgccc aagggcaggt cgac 3274 // |
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